Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001779 ID=TCONS_00001779|Name=TCONS_00001779|organism=Clytia hemisphaerica|type=transcript|length=336bp
GCAAGCAAGGATTCTACCCAGttggaaaaattgcatttctgtATGTTTGT
ATAAATGGTCAATGGAAAGATGCAATACCAACCAACCCAGCATCTATACC
GTTCCCAGATTACCTTTcaCGAACTCCTGTGGATATGGCATCACTAGGTT
TTGTGATGTTACTTTCGTTCAACGGGGATTGCAACCAGCCTGCCGTCAAA
CAAAGTATCATATCCAGTTTTTCAAGCAATATTGGTGCAAAACCAACTGA
CCTTATCCATAACGTCTTCGTATGTGGACAAGTGGCaggcaaataaaaat
aaagtattGTTGGGTATTTCAAGATTTGCTTTTCAC Run BLAST on NCBI transcript from alignment at sc0000012:392333..393365+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001779 ID=TCONS_00001779|Name=TCONS_00001779|organism=Clytia hemisphaerica|type=transcript|length=1033bp|location=Sequence derived from alignment at sc0000012:392333..393365+ (Clytia hemisphaerica)
GCAAGCAAGGATTCTACCCAGttggaaaaattgcatttctgtATGTTTGT
ATAAATGGTCAATGGAAAGATGCAATACCAACCAACCCAGCATCTATACC
GTTCCCAGATTACCTTTGTAAGTAATACATGCGGTGGGCGTTTTTGtcga
aaaaagtcaaaatgaaactttttgaaaaaagtcaaatgaaaattcaaaaa
agcaGAAAGTATCCTACATCTATTTTCAAGTGATTTCTTCTTGTTCCCAA
CATTTAATAGACTCTATGTACGCTCAGCAACATCTAAACTAAACTGGCGT
GCGGCCAGCTAGTTGGATTTAGTACAAAAAAAACTGGGCTTGATCTTTTG
CCGGATTTCCCAGCTGTTTCTTACAGACATCCTCTTCTCACAAACACggt
agagaatttttttcagccaACGGAGATACGAAAAAcgaaccaaaactcga
tggggattgatattgatattgatatttttttatggctggcgatttcaatt
attttgttttcaagtcagaaaaatcAGTGGGCattggaaaaatagcataa
catttcagtgaggattggtttattttattattttcagtgggaacaaactt
tggaggataattttccaccggggaggAAACTTTTTCATTAGGAAGGGGTC
CTAGANAGTGAggtttggtttatttgattattttcagttggAACAAAatt
tggaggataattttccaccggggaggaaattttttcattgggaaggggtc
ctagtgggtctgtgagaagggggtgtatataCAGGACACAAAtaagaatt
ttgttttgttttagcaCGAACTCCTGTGGATATGGCATCACTAGGTTTTG
TGATGTTACTTTCGTTCAACGGGGATTGCAACCAGCCTGCCGTCAAACAA
AGTATCATATCCAGTTTTTCAAGCAATATTGGTGCAAAACCAACTGACCT
TATCCATAACGTCTTCGTATGTGGACAAGTGGCaggcaaataaaaataaa
gtattGTTGGGTATTTCAAGATTTGCTTTTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001779-exon-sc0000012-1491911889:392333..392449 | TCONS_00001779-exon-sc0000012-1491911889:392333..392449 | Clytia hemisphaerica | exon |
| TCONS_00001779-exon-sc0000012-1510915933:392333..392449 | TCONS_00001779-exon-sc0000012-1510915933:392333..392449 | Clytia hemisphaerica | exon |
| TCONS_00001779-exon-sc0000012-1575043694:392333..392449 | TCONS_00001779-exon-sc0000012-1575043694:392333..392449 | Clytia hemisphaerica | exon |
| TCONS_00001779-exon-sc0000012-1491911889:393147..393365 | TCONS_00001779-exon-sc0000012-1491911889:393147..393365 | Clytia hemisphaerica | exon |
| TCONS_00001779-exon-sc0000012-1510915933:393147..393365 | TCONS_00001779-exon-sc0000012-1510915933:393147..393365 | Clytia hemisphaerica | exon |
| TCONS_00001779-exon-sc0000012-1575043694:393147..393365 | TCONS_00001779-exon-sc0000012-1575043694:393147..393365 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:392333..393365 + |
Blast
The following BLAST results are available for this feature:
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