TCONS_00001750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001750
Unique NameTCONS_00001750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001750 ID=TCONS_00001750|Name=TCONS_00001750|organism=Clytia hemisphaerica|type=transcript|length=277bp
TGCCCCTTTTTTCACTCCACTACTGGAATTCTCAAATGGAGTCAACGAAG
CCCTTTTACTCTACTCTAAACAATTCAATATTGTTCTTGGCATTGTTTAG
AGGCAACCAACAAACAAACTCCATAAATCGGACGCCCCAGAATTTATCCA
ATTGATTTCTTCTACAATATCAAAAATTTAATCACTTCAAGATTACACCC
CAGACATTGTAATCTGCGGTGATTTCAACATCCCTCATACCTTAATCAAT
GACAGATACACCCCAACTGAAAATTGC
Run BLAST on NCBI

transcript from alignment at sc0000011:939869..940145

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001750 ID=TCONS_00001750|Name=TCONS_00001750|organism=Clytia hemisphaerica|type=transcript|length=277bp|location=Sequence derived from alignment at sc0000011:939869..940145 (Clytia hemisphaerica)
GCAATTTTCAGTTGGGGTGTATCTGTCATTGATTAAGGTATGAGGGATGT
TGAAATCACCGCAGATTACAATGTCTGGGGTGTAATCTTGAAGTGATTAA
ATTTTTGATATTGTAGAAGAAATCAATTGGATAAATTCTGGGGCGTCCGA
TTTATGGAGTTTGTTTGTTGGTTGCCTCTAAACAATGCCAAGAACAATAT
TGAATTGTTTAGAGTAGAGTAAAAGGGCTTCGTTGACTCCATTTGAGAAT
TCCAGTAGTGGAGTGAAAAAAGGGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000935XLOC_000935Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001750-exon-sc0000011-1491911889:939869..940145TCONS_00001750-exon-sc0000011-1491911889:939869..940145Clytia hemisphaericaexon
TCONS_00001750-exon-sc0000011-1510915933:939869..940145TCONS_00001750-exon-sc0000011-1510915933:939869..940145Clytia hemisphaericaexon
TCONS_00001750-exon-sc0000011-1575043694:939869..940145TCONS_00001750-exon-sc0000011-1575043694:939869..940145Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:939869..940145 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05776	3.00996	6.98971	5.12875	2.08125	0.548212	0.661394	3.09595	0.867018	2.14788	0	1.37046	0.684276	0.355314	1.7527	0.940456	0	0.791661	0	0.572251	0.99478	0.727828	1.76954	1.60877	0	0.492943	0.7054	1.50564	2.85494	0.581747
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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