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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001743 ID=TCONS_00001743|Name=TCONS_00001743|organism=Clytia hemisphaerica|type=transcript|length=899bp
AAGATTTTGGAGTGAGAAACTTAAACAATCGGCGAAGAAAGCTTGTTGCA
ATTAcacagaaaaatatttcttctcgATTGAGAATTCAAAGAAGAAATAA
ATAGCTTAATTCAATCAAACTTCGTGAAGAATCTGTTGTATGGCTACAGT
TTGGtaaatagataaaaatatttgtgtAACAAAAAGTAGTTCTTTCTTGT
TACATCTAGAGAGACTATACTGAGAGAGTTGGAAAGATAGATTTAACTTA
AGGTTTACTCGCAAAGTTCGAAAAATATCCTACAGTTATTGTAATACAGA
GATAAATCACGCGCGAGTAACAAAATGTATCGCTCCAAAGAGAATCAGTT
GCAACGACAAGGGACGTTCGATCCTTATGATTTTGACGTCGACTCAGATA
TCGAAGAAAGCTATATCGCATCGCTTAGAGACACACCAAGTAAATCAACA
GCTACACAAGATGATCCGAAAACAGAAAATCGGGTTACATATGATCCGGT
TTTATCATTACAAGAAGAGCGCGAGTTGAACGATCATATGAATTACGTAA
TCATGatgtcaatgttctatttcGAAATGCCACCGAAGTTTTATGAGAAA
ATCAACCGATCGCGTAGTTTGATCGAGATACTACCTCATTTTAATCTAGA
AAAGAAACATCTGGCAGAGCGAATGTTTTTTAAGGAGAATTTTGGGAATG
GAATGAACGGCGATATGAAAGTTTCCAAAGTATGGCCAAAACAAATTCGT
GAGATTCGTGAAGATTTGAAGaggaaagaagaagaagagaaagaggaaca
ggagaagaaaaattgaaagttgagAATATTTAGTGCATTTGTATACGACT
GTTGATGGTTTTATAACTACAAAGGATTTGTTTTACTGTTTAAATAACC Run BLAST on NCBI protein sequence of TCONS_00001743-protein >TCONS_00001743-protein ID=TCONS_00001743-protein|Name=TCONS_00001743-protein|organism=Clytia hemisphaerica|type=polypeptide|length=163bp
MYRSKENQLQRQGTFDPYDFDVDSDIEESYIASLRDTPSKSTATQDDPKT
ENRVTYDPVLSLQEERELNDHMNYVIMMSMFYFEMPPKFYEKINRSRSLI
EILPHFNLEKKHLAERMFFKENFGNGMNGDMKVSKVWPKQIREIREDLKR
KEEEEKEEQEKKN Run BLAST on NCBI transcript from alignment at sc0000011:751348..752246 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001743 ID=TCONS_00001743|Name=TCONS_00001743|organism=Clytia hemisphaerica|type=transcript|length=899bp|location=Sequence derived from alignment at sc0000011:751348..752246 (Clytia hemisphaerica)
GGTTATTTAAACAGTAAAACAAATCCTTTGTAGTTATAAAACCATCAACA
GTCGTATACAAATGCACTAAATATTctcaactttcaatttttcttctcct
gttcctctttctcttcttcttctttcctCTTCAAATCTTCACGAATCTCA
CGAATTTGTTTTGGCCATACTTTGGAAACTTTCATATCGCCGTTCATTCC
ATTCCCAAAATTCTCCTTAAAAAACATTCGCTCTGCCAGATGTTTCTTTT
CTAGATTAAAATGAGGTAGTATCTCGATCAAACTACGCGATCGGTTGATT
TTCTCATAAAACTTCGGTGGCATTTCgaaatagaacattgacatCATGAT
TACGTAATTCATATGATCGTTCAACTCGCGCTCTTCTTGTAATGATAAAA
CCGGATCATATGTAACCCGATTTTCTGTTTTCGGATCATCTTGTGTAGCT
GTTGATTTACTTGGTGTGTCTCTAAGCGATGCGATATAGCTTTCTTCGAT
ATCTGAGTCGACGTCAAAATCATAAGGATCGAACGTCCCTTGTCGTTGCA
ACTGATTCTCTTTGGAGCGATACATTTTGTTACTCGCGCGTGATTTATCT
CTGTATTACAATAACTGTAGGATATTTTTCGAACTTTGCGAGTAAACCTT
AAGTTAAATCTATCTTTCCAACTCTCTCAGTATAGTCTCTCTAGATGTAA
CAAGAAAGAACTACTTTTTGTTacacaaatatttttatctatttaCCAAA
CTGTAGCCATACAACAGATTCTTCACGAAGTTTGATTGAATTAAGCTATT
TATTTCTTCTTTGAATTCTCAATcgagaagaaatatttttctgtgTAATT
GCAACAAGCTTTCTTCGCCGATTGTTTAAGTTTCTCACTCCAAAATCTT Coding sequence (CDS) from alignment at sc0000011:751348..752246 >TCONS_00001743 ID=TCONS_00001743|Name=TCONS_00001743|organism=Clytia hemisphaerica|type=CDS|length=492bp|location=Sequence derived from alignment at sc0000011:751348..752246 (Clytia hemisphaerica)
tcaatttttcttctcctgttcctctttctcttcttcttctttcctCTTCA
AATCTTCACGAATCTCACGAATTTGTTTTGGCCATACTTTGGAAACTTTC
ATATCGCCGTTCATTCCATTCCCAAAATTCTCCTTAAAAAACATTCGCTC
TGCCAGATGTTTCTTTTCTAGATTAAAATGAGGTAGTATCTCGATCAAAC
TACGCGATCGGTTGATTTTCTCATAAAACTTCGGTGGCATTTCgaaatag
aacattgacatCATGATTACGTAATTCATATGATCGTTCAACTCGCGCTC
TTCTTGTAATGATAAAACCGGATCATATGTAACCCGATTTTCTGTTTTCG
GATCATCTTGTGTAGCTGTTGATTTACTTGGTGTGTCTCTAAGCGATGCG
ATATAGCTTTCTTCGATATCTGAGTCGACGTCAAAATCATAAGGATCGAA
CGTCCCTTGTCGTTGCAACTGATTCTCTTTGGAGCGATACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001743-exon-sc0000011-1491911889:751348..752246 | TCONS_00001743-exon-sc0000011-1491911889:751348..752246 | Clytia hemisphaerica | exon |
| TCONS_00001743-exon-sc0000011-1510915933:751348..752246 | TCONS_00001743-exon-sc0000011-1510915933:751348..752246 | Clytia hemisphaerica | exon |
| TCONS_00001743-exon-sc0000011-1575043694:751348..752246 | TCONS_00001743-exon-sc0000011-1575043694:751348..752246 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011 | supercontig | sc0000011:751348..752246 . |
Blast
The following BLAST results are available for this feature:
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