TCONS_00001737 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001737
Unique NameTCONS_00001737
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length701

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001737 ID=TCONS_00001737|Name=TCONS_00001737|organism=Clytia hemisphaerica|type=transcript|length=701bp
GATATTGGAAGGTTGTCATCCTCATCATCTTCATCACCattgttgatatt
ttcattttcattatcaAGTTGAGTTTCGAACGGTGATTCGCCTGATTCAT
GTCACCACACAATAAACTGTATTCCTGAAAAAGAGCACATGACCCAACTT
CAATTTTACATGACTCGCAGATGCAAAATCTACAAGTTACCTTGAGTGTG
GTTGAGTTTGGTTTGAAGATTATAACTTGAAATTTAGTTGAACCGTTAAC
CGTTGCACATTTCATATTATGCACAGaggctctttcattttcaagctgCT
TTACATCAATTTCTTTCACATAGTAAGTCGGAAGTGtcttatctttattt
tttgctcaaaaactCAACCATGTCAGATGACGATAGCATGAATTTTCCCG
AGGCTACCTCACGCCTATTTGCCACCTTGGCCACTACACACCCACATGGT
CAACCTCTCCTTTATCGTGGCCAGCAATGCCATAAATACGTATTATAGTT
TTGTTTAGTTTGTTACAAGTGTTCTGAACATGGTAAAAATACTGATTGCT
ACAGTTATCACTTTCAATGATGATAGTGTATTTTCCTCTAGATCTGCTTC
TTGAATGACTTCTTCGATAGCAATTTTCACAAACACCCATAGTGTCCTCC
AAGGTGAGTTCCCCCTACCAAATTCTGAACTTTTTTtcaatccccccccc
c
Run BLAST on NCBI

transcript from alignment at sc0000011:705745..706445

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001737 ID=TCONS_00001737|Name=TCONS_00001737|organism=Clytia hemisphaerica|type=transcript|length=701bp|location=Sequence derived from alignment at sc0000011:705745..706445 (Clytia hemisphaerica)
ggggggggggattgaAAAAAAGTTCAGAATTTGGTAGGGGGAACTCACCT
TGGAGGACACTATGGGTGTTTGTGAAAATTGCTATCGAAGAAGTCATTCA
AGAAGCAGATCTAGAGGAAAATACACTATCATCATTGAAAGTGATAACTG
TAGCAATCAGTATTTTTACCATGTTCAGAACACTTGTAACAAACTAAACA
AAACTATAATACGTATTTATGGCATTGCTGGCCACGATAAAGGAGAGGTT
GACCATGTGGGTGTGTAGTGGCCAAGGTGGCAAATAGGCGTGAGGTAGCC
TCGGGAAAATTCATGCTATCGTCATCTGACATGGTTGagtttttgagcaa
aaaataaagataagaCACTTCCGACTTACTATGTGAAAGAAATTGATGTA
AAGcagcttgaaaatgaaagagcctCTGTGCATAATATGAAATGTGCAAC
GGTTAACGGTTCAACTAAATTTCAAGTTATAATCTTCAAACCAAACTCAA
CCACACTCAAGGTAACTTGTAGATTTTGCATCTGCGAGTCATGTAAAATT
GAAGTTGGGTCATGTGCTCTTTTTCAGGAATACAGTTTATTGTGTGGTGA
CATGAATCAGGCGAATCACCGTTCGAAACTCAACTtgataatgaaaatga
aaatatcaacaatGGTGATGAAGATGATGAGGATGACAACCTTCCAATAT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000923XLOC_000923Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001737-exon-sc0000011-1491911889:705745..706445TCONS_00001737-exon-sc0000011-1491911889:705745..706445Clytia hemisphaericaexon
TCONS_00001737-exon-sc0000011-1510915933:705745..706445TCONS_00001737-exon-sc0000011-1510915933:705745..706445Clytia hemisphaericaexon
TCONS_00001737-exon-sc0000011-1575043694:705745..706445TCONS_00001737-exon-sc0000011-1575043694:705745..706445Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:705745..706445 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.210954	0.163292	0.0798776	1.26416	0.998959	0.185416	0.694335	0.0607651	0.225802	0	0.288146	0.0479576	0	0.20473	0.219707	0.0541321	0.0554837	0	0	0.209158	0.10202	0	0	0.619364	0.552768	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001737 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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