|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001715 ID=TCONS_00001715|Name=TCONS_00001715|organism=Clytia hemisphaerica|type=transcript|length=1272bp
ctttttttcaacacttttcaaaataatttataaactttttttgggTCGAA
TAAAATAATCATAATTCATCTGTACATGCTAAtattaataacaataataa
aagggataataatttttaaatcgtaaaagacaataacaataaacaaaaga
ataaaatatataacaaaaaaatctaaatttttctaACAACAAGCCTCGAA
TTCacgcaaaattgaaaattttgataagcAACTTCTGTCGAAAAAAAAGA
CCGGGGGTAGAAAATTTAATTTCGGTTTTAAAATGCTTCCTATCTATTCA
CATGTAAACAATATCTTACCATTTATCTACTTAATTTACATGTGCATGGG
GCTTTAATCTTACTATCTACCTATTTACATGTTAGAAAAAAAGTGCGGTT
AAGTCAAAATAAGAATGCCCGCAATCTTTCATAGGGCGTGGTTGACTTTC
ATGcaatttaaattcatattctgtAAAAACGTGTTcatttctgataaatc
tacaaaaaTAAAGTTGTTATAGCTAGGCGGTGGACATTTCGCATTTAGCA
GATTCGGAAATATGCATTTCAAAGGTTCTTTCACATTTCAACTGCAGAGG
AATCAGCAGAAAGCGACTAGATGATTGAGCCAAGTTTGCAACAATCGTAA
CAGAACGATTTTTAAATCTTCCTTAAgccaaaagaaaagaaatttgcttC
TAACATCCTCATAACGTCCTCCGCCATTAAACTTAACAATAACAGTTTgc
taaaaaataaacttttttttcttcatgagAGTAAAATAGTTAAATAATAA
AACATAAATTTGTCTTTTATATGAAcattaaaacacttaaaattgTACAA
ACAGGAACAAAGTTCGCAGCTCTCACACAAAAAGAATATTTAGAATTCAG
GTCCCACGCCACCgttttttacaaagtaaaattttttggttgcgcctcct
tagactctatattcattgcccccgcccactttcaatttcatggcgTGGGC
CCTGGAAATTGAAAAGgacataccgtattacttcgaataaacgcccgggg
cgtttattaaattttttcgattttaggaggggcgtttattcgaagggggc
gtttaaaagaagggggcgtttattgaattattttagtctaaagTCGAATA
TTTAGAACAAATATATCCTTTGTTTTAGTTCTTTATCaggattttagtgc
aaaatttctttggttcaacgattgaaattgcatcgaaaactgctttggtt
acaagaaatgactaaaatcttc Run BLAST on NCBI transcript from alignment at sc0000011:153892..155163 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001715 ID=TCONS_00001715|Name=TCONS_00001715|organism=Clytia hemisphaerica|type=transcript|length=1272bp|location=Sequence derived from alignment at sc0000011:153892..155163 (Clytia hemisphaerica)
gaagattttagtcatttcttgtaaccaaagcagttttcgatgcaatttca
atcgttgaaccaaagaaattttgcactaaaatcctGATAAAGAACTAAAA
CAAAGGATATATTTGTTCTAAATATTCGActttagactaaaataattcaa
taaacgcccccttcttttaaacgcccccttcgaataaacgcccctcctaa
aatcgaaaaaatttaataaacgccccgggcgtttattcgaagtaatacgg
tatgtcCTTTTCAATTTCCAGGGCCCAcgccatgaaattgaaagtgggcg
ggggcaatgaatatagagtctaaggaggcgcaaccaaaaaattttacttt
gtaaaaaacGGTGGCGTGGGACCTGAATTCTAAATATTCTTTTTGTGTGA
GAGCTGCGAACTTTGTTCCTGTTTGTAcaattttaagtgttttaatgTTC
ATATAAAAGACAAATTTATGTTTTATTATTTAACTATTTTACTctcatga
agaaaaaaaagtttattttttagcAAACTGTTATTGTTAAGTTTAATGGC
GGAGGACGTTATGAGGATGTTAGaagcaaatttcttttcttttggcTTAA
GGAAGATTTAAAAATCGTTCTGTTACGATTGTTGCAAACTTGGCTCAATC
ATCTAGTCGCTTTCTGCTGATTCCTCTGCAGTTGAAATGTGAAAGAACCT
TTGAAATGCATATTTCCGAATCTGCTAAATGCGAAATGTCCACCGCCTAG
CTATAACAACTTTAtttttgtagatttatcagaaatgAACACGTTTTTac
agaatatgaatttaaattgCATGAAAGTCAACCACGCCCTATGAAAGATT
GCGGGCATTCTTATTTTGACTTAACCGCACTTTTTTTCTAACATGTAAAT
AGGTAGATAGTAAGATTAAAGCCCCATGCACATGTAAATTAAGTAGATAA
ATGGTAAGATATTGTTTACATGTGAATAGATAGGAAGCATTTTAAAACCG
AAATTAAATTTTCTACCCCCGGTCTTTTTTTTCGACAGAAGTTgcttatc
aaaattttcaattttgcgtGAATTCGAGGCTTGTTGTtagaaaaatttag
atttttttgttatatattttattcttttgtttattgttattgtcttttac
gatttaaaaattattatcccttttattattgttattaataTTAGCATGTA
CAGATGAATTATGATTATTTTATTCGAcccaaaaaaagtttataaattat
tttgaaaagtgttgaaaaaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001715-exon-sc0000011-1491911889:153892..155163 | TCONS_00001715-exon-sc0000011-1491911889:153892..155163 | Clytia hemisphaerica | exon |
| TCONS_00001715-exon-sc0000011-1510915933:153892..155163 | TCONS_00001715-exon-sc0000011-1510915933:153892..155163 | Clytia hemisphaerica | exon |
| TCONS_00001715-exon-sc0000011-1575043694:153892..155163 | TCONS_00001715-exon-sc0000011-1575043694:153892..155163 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011 | supercontig | sc0000011:153892..155163 . |
Blast
The following BLAST results are available for this feature:
|
