TCONS_00001713 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001713
Unique NameTCONS_00001713
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001713 ID=TCONS_00001713|Name=TCONS_00001713|organism=Clytia hemisphaerica|type=transcript|length=129bp
GAATACATCagattatatataaaaatacaggaagGGTCTCCTCCTGTCTA
CTAAACTGAATCCTCTTGGGCGGGGGTAGGATGACAGAGTACCCTCTGTC
TTACACATTACAGCTTTCAGCCAATGCAT
Run BLAST on NCBI

transcript from alignment at sc0000011:139986..140114

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001713 ID=TCONS_00001713|Name=TCONS_00001713|organism=Clytia hemisphaerica|type=transcript|length=129bp|location=Sequence derived from alignment at sc0000011:139986..140114 (Clytia hemisphaerica)
ATGCATTGGCTGAAAGCTGTAATGTGTAAGACAGAGGGTACTCTGTCATC
CTACCCCCGCCCAAGAGGATTCAGTTTAGTAGACAGGAGGAGACCcttcc
tgtatttttatatataatctGATGTATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000899XLOC_000899Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001713-exon-sc0000011-1491911889:139986..140114TCONS_00001713-exon-sc0000011-1491911889:139986..140114Clytia hemisphaericaexon
TCONS_00001713-exon-sc0000011-1510915933:139986..140114TCONS_00001713-exon-sc0000011-1510915933:139986..140114Clytia hemisphaericaexon
TCONS_00001713-exon-sc0000011-1575043694:139986..140114TCONS_00001713-exon-sc0000011-1575043694:139986..140114Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:139986..140114 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001713 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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