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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001712 ID=TCONS_00001712|Name=TCONS_00001712|organism=Clytia hemisphaerica|type=transcript|length=1363bp
tattactcgttgtcggacaaaattgttgtcggaatactgacgcattcgtc
aaatccaacgtcggacatttttactgtcggactagaaagtgtcggactac
tgacgacctcccattGTTTTCCTTGCAAATTTTGGATTGAAAATGGTATA
TAACACGTCTTACAAAAACAGAATGGTCTGAATACTTAGATTGGGCACAC
GTAACATCTGAACATAGCGAGGGGTGTTATTCAGACCTGCCAACTTTGAG
ATGTCCATTCtgcgtgagataaaaatttccaagtgaaatCCCAAACTTAA
CCCAGTTTTccgattttccaaaatcagaaaCTGGGGAAACTTTTTccaga
aatcagaaaattaGGGAAACTTCTTTCCAAAAAGCAGGatatttggaaat
attttttcggGAAATCAGAAAACCAGGGAGATACAATTTTGAAATGCACG
AGTCACACGTTCAATGCATGAGAGTTGGCAGGTCTGGTTATTAAGAGATT
TTGTACTAGATCAGCCAGGAGCTGTCCTTCTTAGTGCAGGTGACAAAATC
CCACACCCAGCCAATTAAACCTGTGTGAGGTCTGTTTTCACCCATATTCA
GTCAGGGATATCCTTCAACTGCGGTATTActgcaattgagggatttccct
gactgataTTTCCAATTTCtagatatttcaattttctgCAACAGCTTAGT
AGCATGGGTGTGGCGGGATGGACTCAGAAATCATTGATAAATTACTTTGT
TGGTTCAAGCTAGGGTCAAATTCAGGATTTTGAAAACATCTAAAGTTTGA
GGCGTTCCGAACATTgtctaaaattaaattaaaaatatttttcttcatgA
CAGCATGAGTGTATCTATTTTTGTAAGATTCGCCTCTGTACCTATTTTAA
TTAGAAATTTCCTTACATTATTATAGCTTNNNAAATAAACGGTTAGCcac
caaaaatactcattttattaacataattgtcagccaactttgaaaatgtc
acaaaacaggcctttatttttgaacacgatccttataacctgataacaga
tatTCTAGGTAAAAAATAGGTAGGCACGGAAAACTGAGGGCTTTAGGCAT
GGTCATTTATACTTCAAAAGAAGATGATTTGATTGATGACAtcataaaac
ttgaaatttgaATATGAGGGAGTCTATGTaacaaatcctgcattactaaa
aatagacaaaaagaacaacaaattttgctgtccacaaccccgacccaaag
tgactgtaccacccctatgGATTCATTCTTTGTTTATCACAGGAATTTAA
GTACGTATATGTGGTTTAAAATAACGATAAATTTTGCATGTGTGTTACAA
TGGCAATATTTGT Run BLAST on NCBI transcript from alignment at sc0000011:137830..139192 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001712 ID=TCONS_00001712|Name=TCONS_00001712|organism=Clytia hemisphaerica|type=transcript|length=1363bp|location=Sequence derived from alignment at sc0000011:137830..139192 (Clytia hemisphaerica)
ACAAATATTGCCATTGTAACACACATGCAAAATTTATCGTTATTTTAAAC
CACATATACGTACTTAAATTCCTGTGATAAACAAAGAATGAATCcatagg
ggtggtacagtcactttgggtcggggttgtggacagcaaaatttgttgtt
ctttttgtctatttttagtaatgcaggatttgttACATAGACTCCCTCAT
ATtcaaatttcaagttttatgaTGTCATCAATCAAATCATCTTCTTTTGA
AGTATAAATGACCATGCCTAAAGCCCTCAGTTTTCCGTGCCTACCTATTT
TTTACCTAGAatatctgttatcaggttataaggatcgtgttcaaaaataa
aggcctgttttgtgacattttcaaagttggctgacaattatgttaataaa
atgagtatttttggtgGCTAACCGTTTATTTNNNAAGCTATAATAATGTA
AGGAAATTTCTAATTAAAATAGGTACAGAGGCGAATCTTACAAAAATAGA
TACACTCATGCTGTcatgaagaaaaatatttttaatttaattttagacAA
TGTTCGGAACGCCTCAAACTTTAGATGTTTTCAAAATCCTGAATTTGACC
CTAGCTTGAACCAACAAAGTAATTTATCAATGATTTCTGAGTCCATCCCG
CCACACCCATGCTACTAAGCTGTTGcagaaaattgaaatatctaGAAATT
GGAAAtatcagtcagggaaatccctcaattgcagTAATACCGCAGTTGAA
GGATATCCCTGACTGAATATGGGTGAAAACAGACCTCACACAGGTTTAAT
TGGCTGGGTGTGGGATTTTGTCACCTGCACTAAGAAGGACAGCTCCTGGC
TGATCTAGTACAAAATCTCTTAATAACCAGACCTGCCAACTCTCATGCAT
TGAACGTGTGACTCGTGCATTTCAAAATTGTATCTCCCTGGTTTTCTGAT
TTCccgaaaaaatatttccaaatatCCTGCTTTTTGGAAAGAAGTTTCCC
taattttctgatttctggAAAAAGTTTCCCCAGtttctgattttggaaaa
tcggAAAACTGGGTTAAGTTTGGGatttcacttggaaatttttatctcac
gcaGAATGGACATCTCAAAGTTGGCAGGTCTGAATAACACCCCTCGCTAT
GTTCAGATGTTACGTGTGCCCAATCTAAGTATTCAGACCATTCTGTTTTT
GTAAGACGTGTTATATACCATTTTCAATCCAAAATTTGCAAGGAAAACaa
tgggaggtcgtcagtagtccgacactttctagtccgacagtaaaaatgtc
cgacgttggatttgacgaatgcgtcagtattccgacaacaattttgtccg
acaacgagtaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001712-exon-sc0000011-1491911889:137830..139192 | TCONS_00001712-exon-sc0000011-1491911889:137830..139192 | Clytia hemisphaerica | exon |
| TCONS_00001712-exon-sc0000011-1510915933:137830..139192 | TCONS_00001712-exon-sc0000011-1510915933:137830..139192 | Clytia hemisphaerica | exon |
| TCONS_00001712-exon-sc0000011-1575043694:137830..139192 | TCONS_00001712-exon-sc0000011-1575043694:137830..139192 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011 | supercontig | sc0000011:137830..139192 . |
Blast
The following BLAST results are available for this feature:
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