TCONS_00001697 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001697
Unique NameTCONS_00001697
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001697 ID=TCONS_00001697|Name=TCONS_00001697|organism=Clytia hemisphaerica|type=transcript|length=159bp
TAACAATGCATTGCAGCAGGTCATCAAAATCTTACCAGGAGAACTCAATG
GACCAGAATCTATTCAAGTGGACAGAGACGGAAATATATATACGGGATTA
CACGACGGAAGAATCATAAAGATCTTACCGTCCGGCAAAATAGTTCATTT
AGTGCGAAC
Run BLAST on NCBI

transcript from alignment at sc0000011:866994..867320-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001697 ID=TCONS_00001697|Name=TCONS_00001697|organism=Clytia hemisphaerica|type=transcript|length=327bp|location=Sequence derived from alignment at sc0000011:866994..867320- (Clytia hemisphaerica)
TAACAATGCATTGCAGCAGGTCATCAAAATCTTACCAGGAGAACTCAATG
GACCAGAATCTATTCAAGTGGACAGAGACGGTAAGTATCGAGACTTTTGG
CTAATATCTTATCAGGGAAAAAAGTCGGAGGAAAGTATTGCTTTAAACAC
GCTCTTCAGGCAATACAGTGTATTGTATATTTTAATTTCATTCTTTTTCA
ATTTTTGAACTTGCTTGTTATATTATTTTCATTTTTACTTTCTTCTAGGA
AATATATATACGGGATTACACGACGGAAGAATCATAAAGATCTTACCGTC
CGGCAAAATAGTTCATTTAGTGCGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000884XLOC_000884Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001697-exon-sc0000011-1575043694:867241..867320TCONS_00001697-exon-sc0000011-1575043694:867241..867320Clytia hemisphaericaexon
TCONS_00001697-exon-sc0000011-1575043694:866994..867072TCONS_00001697-exon-sc0000011-1575043694:866994..867072Clytia hemisphaericaexon
TCONS_00001697-exon-sc0000011-1510915933:867241..867320TCONS_00001697-exon-sc0000011-1510915933:867241..867320Clytia hemisphaericaexon
TCONS_00001697-exon-sc0000011-1510915933:866994..867072TCONS_00001697-exon-sc0000011-1510915933:866994..867072Clytia hemisphaericaexon
TCONS_00001697-exon-sc0000011-1491911889:867241..867320TCONS_00001697-exon-sc0000011-1491911889:867241..867320Clytia hemisphaericaexon
TCONS_00001697-exon-sc0000011-1491911889:866994..867072TCONS_00001697-exon-sc0000011-1491911889:866994..867072Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:866994..867320 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001697 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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