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TCONS_00001600 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001600
Unique NameTCONS_00001600
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1541

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001600 ID=TCONS_00001600|Name=TCONS_00001600|organism=Clytia hemisphaerica|type=transcript|length=1541bp
aatcatTCGTCTTTTCCGTATATAAGGAGAATACTAATGAGTTTAATTAG
ATATTGAAATAAAGATTTCACGTCCGACTGAAAAAAACACTGATTTCTAA
ATCCTCTAGTTGATtaattttgttgtatttttttggAGACAAGTTTTAAA
GGAGATCAACATGGAAGAATTAAAGATACAATCCAAGTTTTGTTGCAATG
GGGAGCGTTGTCAAAGAGAAAACGAAGAAacgaaaaaatattaagaaagg
AACGAGCACGAAAAGCCAAGACTACGAAATCGACGATCTAATTCAAGAGG
AGTTGAAAGACGAAGAAATACGCAAACNCAACCAGCACGAAAAGCCAAGA
CTACGAAATCGACGATCTAATTCAAGAGGAGTTGAAAGACGAAGAAATAC
GCAAACAAAGACAGAAAGAATTGGACGAAATCACACGTAACACTGCTTTA
GATCTCGTAAACGAATTTATAGAGAACGAAACTAGAAGTTCGTTCAAACG
TAACACAAAAAAGTCGACCGCAAAAGCGTCGAACGTCGATACAGAAAAAC
CAGTTAAaccgaaaacaaagaaaaagaaagcgaaGAAAGAGACAATCTTA
GAGATGGAGGACCACGAGACCAAGATCGATTTATTGCACCTAGATGAAGA
GAACACCCAGTCACAAACGTCTGTGAAAAGCGCAaccaagaagaaaacaa
aacccaaacagactaaaaacaaacagaaatgGGAAACATTTGAGGAGAAT
TCAACAGAGAAATCAGCTTCAAATAAAGAAGGTACCGAGAAAACgacaaa
gaaaacgaaaaagcCAAAGGTTAATAAGATCTCACCAACTCCGCCTCCCG
ATAACGGTCAGCAGGATCGTAAGAAACGGATAAGCAAAGATACCAATGAT
TTGAAATTACAGAGTTTCTCTGAGGATACCGATTTAGAGGTTGATAGTTC
ATGCTTGACCATGCTTCTTATGGCAATCTCACTTGAAAGTGAACTACCAC
CGAAATTCTACGCAAAATTATTGAATAGTAAGCGATTTAAGGGAGCCTTA
AAGAACATGACTCTTGAAGAACGAGAATTAGTGCTTGCCATGATGAGTGA
TGTGGAGCCTGAAGTTGATTATTTGCCGatcagaaatgaaattttcattg
atAGTTTCAAAGATCGTTTGACCGTCCCAACTTAAAAGATATGGAGAACT
TCTTACCATAAAAGTCTAGGGTAATAAGAGGTATCGAACAGTCAGTAAAA
CtgaaattcttaaaaatgaaaagttcttctTCGCCGAAGAGACCATCAGA
TTGTATATTGAAAGGTCAAATGTAAACTCTTGCGAATGCTTATTAAAATG
ATGTGATACAGTTATGAGAATTCAAATACGGTATAATATGACTTTAGACT
GgattttcaagttaaaaaaagGACGATAAAAGCAACGCAAACTGGCATAA
AACCAAAACACCCTTAATATAATCGGTCTCGGACAAACGGTTTACTGGGA
TGCAACAAAATCTCATTGTCATTTACGAATGGGatgttact
Run BLAST on NCBI

transcript from alignment at sc0000011:750730..767676+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001600 ID=TCONS_00001600|Name=TCONS_00001600|organism=Clytia hemisphaerica|type=transcript|length=16947bp|location=Sequence derived from alignment at sc0000011:750730..767676+ (Clytia hemisphaerica)
aatcatTCGTCTTTTCCGTATATAAGGAGAATACTAATGAGTTTAATTAG ATATTGAAATAAAGATTTCACGTCCGACTGAAAAAAACACTGATTTCTAA ATCCTCTAGTTGATtaattttgttgtatttttttggAGACAAGTTTTAAA GGAGATCAACATGGAAGAATTAAAGATACAATCCAAGGTAAATTTTCtga tcaatattttcatttaaagCCAAACGAAGTCTTTACCAAAAAATGGGTTC TAAAGAACAATTCCTTTTCAGTCAAACGAACCCTTGGGAAGGGGGTACTA GGGtagactttcgaccctcggacccttagtgagactaaaaaggagaatAA ATGAGGAAAGTATCGTTAACTTTTTACCCTtacttattgggactaatttg acaaaatttcgatctttcgagatttaaatttcagattttttcagcccTTA CAGGTTCTAAATAGGCACCTTTAAcacggcacatacccgtacccttcact ACCCCCCCCCGACCAAAATTGGCTTTTCTACAAAGCATCATGGGGACTCT TATGCGGATTTTATATCTGTCCTTAGACAAAGAAATAAAAGTTAAGATCA TTTTTACGTGGATAGGACGGTTATTTAAACAGTAAAACAAATCCTTTGTA GTTATAAAACCATCAACAGTCGTATACAAATGCACTAAATATTctcaact ttcaatttttcttctcctgttcctctttctcttcttcttctttcctCTTC AAATCTTCACGAATCTCACGAATTTGTTTTGGCCATACTTTGGAAACTTT CATATCGCCGTTCATTCCATTCCCAAAATTCTCCTTAAAAAACATTCGCT CTGCCAGATGTTTCTTTTCTAGATTAAAATGAGGTAGTATCTCGATCAAA CTACGCGATCGGTTGATTTTCTCATAAAACTTCGGTGGCATTTCgaaata gaacattgacatCATGATTACGTAATTCATATGATCGTTCAACTCGCGCT CTTCTTGTAATGATAAAACCGGATCATATGTAACCCGATTTTCTGTTTTC GGATCATCTTGTGTAGCTGTTGATTTACTTGGTGTGTCTCTAAGCGATGC GATATAGCTTTCTTCGATATCTGAGTCGACGTCAAAATCATAAGGATCGA ACGTCCCTTGTCGTTGCAACTGATTCTCTTTGGAGCGATACATTTTGTTA CTCGCGCGTGATTTATCTCTGTATTACAATAACTGTAGGATATTTTTCGA ACTTTGCGAGTAAACCTTAAGTTAAATCTATCTTTCCAACTCTCTCAGTA TAGTCTCTCTAGATGTAACAAGAAAGAACTACTTTTTGTTacacaaatat ttttatctatttaCCAAACTGTAGCCATACAACAGATTCTTCACGAAGTT TGATTGAATTAAGCTATTTATTTCTTCTTTGAATTCTCAATcgagaagaa atatttttctgtgTAATTGCAACAAGCTTTCTTCGCCGATTGTTTAAGTT TCTCACTCCAAAATCTTACTATTCTAGTAGAATATTTGATTAAGTTTAAG AATACTTCCTTTATGCTGTTAGATTCTTCACACTTTTGATGACTCTTCTG TGAAGCTGTCAAAACAACCATTACGCGCAGAGCATATATTGGATGCTTTA TTAGAAGCcatatacatgtttttataagaacaaactatataaaacaagca acatgctgaacggacctacctggtgaccaaaatcagataaaaataggaca aatagcaagatagtaagaaagtgtaatgagcagcttgaatataggcactt ttctgcccaaatttgctcaaaaagttattttttcgaaaatcaggctccat cagaagttaaatattaccattttatagcactatgcaaaaaataagaaaag aaacaccaagccaatctcgagaaatgctcattttccctaaatatgacaaa agggagtttccccaaataagaaaatccgatttttacagcCAAAAAAATTT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTGA GTTACGTTTTAGAGATACTTGCCTtttatctttgtccaaaaaatttgaaa aaactaatgaagcaatttcacacaaagtctaGAAAACCccatttggccaa aatttgcctcaaaaaattattttttgaaaatcgggcttcatcagatttta aagattaccattggccaaaatttgcctcaaaaaattattttttgaaaatc aggcttcatcagattttaaagattaccattttacatcaaagtgcaaaaaa tcagaaaaggaTATTGATCatattggccaaaatttgcctcaaaaaattat tttttgaaaatcgggcttcatcagattttaaagattaccattttacatca aagtgcaaaaaatcagaaaaggaTATTGATCCAATCGCGAGAAATcttct ttttccctaaaaatgacataagggaatttccccaaataagaaaatccaag TTTTACggccaaagaaaattttccggaaaaaaagGCTTCAGTTGtgtttt agagaaccttgccttttatctttgtccaaaaaatttgaaaaaactaatga agcaatttcacacaaagtccagaaaaccccatttttaggcacatttttgg ctcaaatttgcgaaaatccgtattttacgacgaaaaaaaattttccgaga aaaatcacttcagccacattttagggtaccttgcactctatctttctgcc aaaaatcaggaaaaactaatgaaacaattttgcacaaagtccaaaaaacc ttatttttaggtagcttttggcccaaatttgcccccaaaatttttttttc aaaaatcgggctccgtcactttttaggcattgctattttgtatcattgtg caaaaaataaaaaaaaactaatgagccaatcccgagaaaagcttgtaaca gacgaacggacaacggtcaaattaaaggacctcccggtaggtccaaaaat aaggcttcaatggccaaagtatcaagaacaagttaagaacattttaaggc ttcacggactctaaaacacccaatttcttaggaaattgcacaaaaatact gaaaaatggagaaagaaggcttgaaactcaaagaGCTAAGAATATCTGAA GGCTTCAGGAATTTTGGATATTTGGAAGCCGTATTTCTTTTCTTGaaaca tttagtaaaaactattttcttataccttcacgttttttataagaacaaac tatacaagacCTTGATGGCCCAATAAAAAGTCGTGGGACTCCACAGcatc cgatttcttaggaagatAGACAAAACACTCAcataatggtgaaaataaga acatgttaagaacacttttaggcttaaaactcgaaTTCTTACGATTTTCT TACATCTATTACCAATGCAGCAGTTTAAACAACTTCATCAACGCCGTGCC catgtatcccaggctttatttatgttactgggtgacgccagagaataccc tggtgttggctgatgcgagttccccctctcagagggaGAACTTCTAAAAA TAATACTTCAAAAAATATCTGACGTAACAAAATTACAGCGCAATTATCTA ACGCtgtcagtaagcataaaaaagctgataatgtgCAGGGAACGAGGTGG TAACTTCGTCATGCCCTTCTCAAATCAATTTCAGTAAAGTTAAGAAACTT TTATACtgatttttctcgaaaatttttggttaatacacatctttgtgcaa aaaatcaaaaaaaactaatgatgaaatctcgagaaattcccggcattttc ggccggaaatgattttttttcgaaaatcgggctcagtcacattttgggca tcaccattttgcatttttgtgccaaaaatcagaaaaaacaatgatcctaT CTTGAGAAAAGCTTCTAACAGACGAACAGAAGGACGGACGGACAACGGTT attttataggacctccaggtaggtctaaaaaaacttttgaagacACCCTA GTAGAGTGGTTTGCGTTGTTGTGATTCTAATTATTTTTAGCGTGATGTCG TGGTTATGATTTTGGCATGATTGAGTAAAAATTTGAGGAGTGATGTGATA TGTGATTAGGGTTAGTTTTCGCTATTTCTTAGCCGATAAACCAATTTTCG CAATTTTGCATGATGGCGTGATGGTGCCGCTGGGGCAGCTTATTTTTATC GTGATTTATAACTTTTAAGGTCGATGTGTTACTTCAGTAATGAATCAAAA CAATGTCCCGAGGATACCGTAGTGATATAATCGCGTAACCATACTGTAAC TATGCTGTAACCATGACCTTTCAtaagtgaaggtagagagtctatcacca tattttcctaacaccctgcctggatGTGCTTGGGACACACAATCCATGAT CTTTCATGGTAAGACTCAATAGGTTCTTCTTTCGTTTCTTTTTAAAAACT AAATTACTCCTATGTAAACAGAACTTGTAAAtatcaacagaaaattttta tataagaagTTTTACCCTCGTTTTGGGCTTAACCTAGTATCAACGCCCTT TaaatgaaacttttgaaaaattaagaaaaacaaCCACAGGCATTCACTCA AGGATCAAGTGAACGAAGTTTCGGTcgaatccgaccatttttgaagtctc cagcctgccccaaagttttgaggTGACAGAAAGaaggacagacagacaga cattctcaggTTCTAGTCATCATAGTGATTTTAGAGGGATGTCATTGTGA AGTATTTGGGTTCACCTTGACGATCATCTAAATTGGAAGGCTCATACTTC TTTCGTTGCTGCgtagtaaaaagtaaaaagcgcaaaaatggagaaaaaaa caagCCGGTgataaattaaagaaaataactggaaagtaaacaaatatttt gcagCTCTAGCTTTAGCCAGATTCACGCTGACACCTTAGAAATTAATCTC CTTAACGGTTATAACTGCAATTCTCACGAGCGATTCTTTGATCTTAAGAA ACTTTAAAACTTCTAATTCCTTTTGGCTCTTCGTatctatttaaaatttt tgacggTATATTAATTGTAAATTAATCAATGCCCAATTCCCACATTTGAC TTATTCAATTGCGGAATTTGCTTTCGATTAATTTCCTGGACAGTCggatt tttattcaattttcaattttcccaGTATTCCTGTAATTCGATCCGATtct attcttttattttcaagtgtattaggaacaagttaagtttaaggctttgc gggaCTCTAAAACACGTGATTTCTTAGTAAAATGGACGAAAATACTCACA TTATGGTGAAAATGAGAACGTGTTGACAAAATTTTAGGattaaaattcaa aaggttatGAACATCGGAATGcttcaaaaaacctttgaaaaaactCGTAG TAGTAGTACAGAAGCAGATGGCGaagcattttttgagaaatGTGCGTTCT TATGGGATTCTTATTTTCTAGAAGATCCACTTATCactagactggcacgc cagtcgggctggaacggtatcacgcgggaaaagtgagcgtaggagttagg taagcgtaggaagaaattttgtcggcggcgagGGCTGAAAGCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCTTATATATACTTACGTAGAGGGAAATTTAGC AGAatttatggagaaaattaagaattctcagtttggcaacaaaaatttct caaacgtACTGTACACATAGCATAGTACCTACTATAACTTTAAATAaaca tttacatatttttaaattgccagattagtgtggcaagaaaactcattttt ttcattcagccaTAAATCTTCAAGTGTGAAGTTAATTTTATAGTACACAT ACTTACTTctattatttctatttctatagaAATAATAGAAGTAAGTATGT GTACTATAAAATTAACTTACATTTTACTTTAATTacaatttacagaaaaa tgggTGATAAGTATATGTCACATGTTCAACAACCCATTTTTTCCACAGCT TACTTGTTCAACAAATTCTTGTCAAATTGAATGTCAAACAAGTGGGTTGT GGAACAAATGGGTGCCAAAATGATTGACAACCCAGTTGATTGACaatcca cttgttcgacaatctaTATAGTTGTTCAACAGACCAGTTGTTTGAGAGAA GAGTGTCGAACAACCATGCAGTCAAGCAAATGGGTGTCGAGCTAATAACT GTCAAACAACCGGTCTAACAAATGTACCGTCGGAcaagtatactgtcgaa caagtgggatttccccaaaattaTAGTTGTACGTAGATGAAAANAGGGAT AATCTTTGGAGTTTCTTTAAACTAACCAGGAAACGCTTTTTATTCTCACG ATAacctaaaaatagttttcaaaccgtaccaaaaacatttttggtatGGC TTGAAAACCTGTGTTAGGTTATCGTGAGATattaaaagtgtcagaattat tgattattatgatatgttattattcttaaaatagtgtcaaaattttttca NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGCACTCC TCCGTTCTCACAACCTCCAAAATGAAGCCGTGGCAGAATGTTCTAGTCTG tatatcagcagcctctcaccaactttggctcgctctcctacgcagctcct attctagcaaacgcccgccgcctttatgttcccgccctctgacatgatta atttacagactagtttgctagtctaacTTATCACTTGCTTGTCTGAAGAC CAACTTATCATTTATTTATGATAGTTTGATTCCAAAAAGTATgacatgaa aagttctttttcaaggttttctaAGTTTTGGCTCCAAGAAAATCTTTATT ATTCAggattttgttttcaaagtttttgaggTCCCGTagaatttcgagaa aaatttACCCTGGATCCCAAAAACACGAAAATCATGGACAAAGCTGGAAA ATActggaaaatataaaaatgatgAGGACCAGTGAGGACCAAAAGAAAAG GGGAGATCAATATACCGACTAAAAGTAAAGTGAGAAAACACCCTGGTGAG TCGGTCTCAAGTTCGTAAAGAAATAAAATAGTTGCAAAAGCTCTATATAT TGATTTGAGATGAGGGGtataacaaatatttttccaggaANAAAATAGTT GCACAAGCTCTATATATTGATTTGAGATGAGGGGtataacaaatattttt ccaggaAGCTTTTTATTAGAGAATATGCCTGTAAttaactttttggaaaa atacttaaaaataggccataattttagcaaaattgacATATACTGTCACG TCTCAAAATCTAAATCTTAAACAGCTAGAGTAGTCGTACAATTTATAACT CATAACAGACCTTACTAGTCTTGCCGAGACTTCTCTCTgaatacaaggaa aaaaatacttcaataaATTCTTATAGGGAATATGAAGTATGGAAGGTTGA ATATCCAAGAAGAGAAGAACGCCTACTAAATTCAGGGTGTCAATAAATAT TTGTTAGTATAATTTCCATCCCAATGGAGGGGAGAATAAAGATGAAAAGG GCAAATTTATTCTTCAATTCAGCAATACAATActagttgttttttttcat agataaaagtattatttttctactctcaacaaaatttcgacactaacatG ATTATATTCGAAGTGAGGAGCGCGTGATGTTTGTATTGGTTTAGTTTCGA TGGATGAATTAATATCATTTCATGAGGAAATATAATAGGGGCAGAGAAAT TTGAGGGAGAGATTTCTTTCAAGCGCAGAATATTCATTCTAGTTGAACGA AGACGGAAGACTAAACGCTGAACCAAACAACAGAGCATCCAAGAAATTAA TTTAGGAATTAATTTTGGTAGTGGCTTTTCCCTTTGGGAATAAAGGTAAG tagctattttgaaaaaataaataagtagATATGTAATTAACACGAACTAA TTTCGTGTTGGTTTAGTTTTaatttagactggagtcgtttataatgcatg taataataataataaacacaaataatgatacgggatttagtttgtataaa cgactggaagaatccggtgttccagccttatagataccgggcctagctac gcagaaacttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttt gtttggagttagtgcacaaaggtttctagacgactaaaatttactttttt gctttatttctaatatgtctgaattagtcgtctagcttgctagactagtt tTAATTTAAATCCCTTCCATTAAAACCAtccgtggtgtccttgaaaacta gcaaaaaaaattcttgttttttttgcatcgtaatttcaaggccgttcaAT ACTTTTGTCTACTTAAAAGGTATCTACAattatggacaaaatatttgaga taaATGGGATTTCCCGACGAAATTTAAGacttaaaaacttaaatttaCTC GTACAAGGCTTACCATATAGCCTAGAATCCACCAAACccttctaaaatcg aaatattcaatgaaagaaactggaagtgctaaaatagcaattctcgcccg aactttaaattctgaaaaacgttaaaatacactaaaactttcaatatatt ttgaccataaTTTTACTTGTATTCGAGTAATAAGGTATTCTCAAGTAGTT TGTGGCGAACAGACAATGACAGTAAACGGCAACGAATTTTGACATTTACG TAGATATCAGGTCAGGTACAATAGGATGTGAAATAACGCCACTAGGTTAC TTCATTTAAGAATGTGGTTTTAGTTTTGTATCCAATTGAATCTGCTAAAT TGTTTGGGTATGTTGGTTCATGGGTTGAATTGGTGCTTTTTGACCGATTT GAAGCGAGAAATTGACCCAAGCAAACGGAGCTTTTTGTTCGGGGTGCGTT TGTCAATTTTGTACGTGGTTGTGTGGGTTAAAATATATCTGTGTTGGTTA TGAAACTTTTTTGCATGCGTCGATAATCCCCACGCAATTAtgaactgaaa aaatgaaagaagagaCTTACGAAATCGTTTATGTTGTAGCTTTTCTTTAC AATACACCAAATCCCATAAAATCATTCCAAATAGTCAATAATCATCGAAT AAATCCCTAAAAAGAGAGGTTTGTAATATGTGATTATTAGCTTTGGATTG TGTTAGACGTAGAcaaggtgaaaaaaaatttcagtttaGCTTTTCAGAAT TCTTAGGCCCATCGATTTAGAACTAAAGGCCCTTTTCTAGGccactaaaa tgaaaacatctTGAAGGTGAAAAATGGTAGTCTACTGTATCAGACCGCTC CGAGCTTTAGGCTAGGAAGGAGAGGAGGTTTAACGAACGGAGCGAGGGAG ATATGGCGTAGCCTAGAAAAATGGTGGTTAATACGAGGAGTCGATTTTTT CCAGTGAAAAACCCTGCCTGACTGGGCATTTGCAGATTCTGAGACTGGTA GGAGAATGATGTTTATTAAGTGGGCAGAATCCGTTGAAAAATCACGCAAT GTAAAACAAGGTCCATTTCCGTGACATTTGAAATATGGCCGATATCCTAT AGGTAcacaataacttttttttatatgagctgaaagcaatgatagtaata tTTCAAAAcctgtaaaaatttgaaacatcGATCCTGATATTGCCAtggat ttaaaaattgtttcaatatttttagttgGATTTAACAAGAGTAGTTGACA AAGTTCAGACTTTTACAACACGGAAAGGTTGTACGCTTATTTCTAACAAG CCGAATCAAACTAATGAAAGTGAAAGAGACGACAAAGTAATATAAATCGG AAAACGTCGGGATAAAATTGTAGATAAAGTAAAGtaacatttcaaaaata attagcgaagtaaagaaaaatttgaaaatttgaaaaatcaaccttttttg taagaacaggTTATCAAAAGAAATACAAACTGCCATTATTcctaaaaata atttatcaagTCCGTGAGCATTCAAACAAAAGACTTGATTCATTTGATAC GAGCGGTAATAATGTTGATAATTTCAACATCCTCTTTAAAAACAACACAA CAAGCATTCTTACTGGACAGTACacttttgaaatgaatttttctttcaaa aaaaatatgaataaaaatagaTTCAAGAAAGGTGTAAATTGACCGAAAAG AGGacagatttttataaaaaaatatggaaaaagaataaaatttcaaactt atatTTCATTTTGATCTTTTGTAAgacgaaattttgaataacgTTTGGTC GCACTCAAGGGTATGGACACCAGTCAGTAATAAAGGTAAAGGATACGATA CAGTGGGTGCATCTTGcaattcctgcattaataacacgcacgcgtaattt gtcgttcttttaaaccacttGTAGTTAATTCCCGGGATAAACAAACAGAA ATGAATCGCTAAAGGTGATCCAATTattttcggtcggggttgtgaacggc aaaaatatgaaatttggcGTTCTTTTCtgtcgttttttataaaatttgtc gttttttttgtctattttcggTAATGCAGGATTTGTAAGATAGAGCCTCT CATACGataagttatttaaaaaaaatttatttcaaaatatcttttaaagA TGCATAATTTAGCTGTCCTCGATCAATCAATTTTAACGTTTGATACACTA AAAACTAATTTAcgttattttatcaaaaaccgGTTGTGATTTGCTGAAGC ATTAAAAGCATGTGAAAACATGACAACCTCTTTAGAACCTGTCTTTTGAA GCATGTCTaatcaatgtcaattgaataacAAACTTGGTCTGGAAGTCAgg ttattttgaatttcaagattGAGACTTTTTTGCCTATActttttaatcac atgatcagaATCCGCGTTAGAGCGTTAATTGTCGCAGTGAAAGGTAATGT GACATCGCCCATTTAATTAGCCCGGGGTCCAGTTAAAGTTTTTTGATTGA CTGAATAGCGCTAATAAGAGGCCCGGCGTAATTTGGCGGTAGCAAATACA TGCACTAAatccagtccctttttggaaaaacaaacaaacagaaaacGACC AATAGAccaaatttttttcagatttttgaggtatttacatgtttttatta tagtttcataagttttgatggggttttagaatattattttattgatttgt tgttttcttataatttttgaaaacgaaagtgaaaaaaatcaagatggcgA TATCCTCTAGTCCGGACTTCCTGAGCAGGTGGATATCTAGCCCGGGGTCc tcttaaagctttttttatagactggatggcgcaattaagtggcccggtag tatatggtaatatgcttttgcctaggcggactgtaaaacagtccgccaga ttttagttgtttttggaaggtaaaaacagtatgtagcaatgtttttatac gagaataagggattgcaaacctgttattgatgtttgtttctcatttttga ttatatctttcaacttcgagtagttttattgttatttggatttttaacat tttttttcaaaatggcgacctcgccaaatgctcctagtctacttcactgg actcagcgtcataaaaaattgtcaaaaagcaaagttcagccaaaagtaga ctctagtctagtggATATCCAAATTGACAATGTTCAGATTGTTTAATTTA GCGTATCTTTCAAAGAGAAATTTTAGATCATTCATTCTGGATCTAAATGA GTTTTAGTTGTAGTGTGACTGGAAATTTCCAGGTGAGACAAACAGATGAT TTGTGTTCAAAACACGAAATTCAcgtgttttttcttcttcaatcttCAAT AAATGAGCTTGAAAATTGGAAATTAGAAGTTTGTTCAAGATTTTCAAGTT GGAAATCACCTATCTTAGTTGGTATAAGAGCATATATAAAGGAAAAATGA TGGAACAAGAACGACAGGGAGCACGAGATTTTGAAATCAGTATGTAACTT TCTTCTTCAAAAGTAGAACCTAAAATCATTCAAACTGCgggaaaatcttc attttcattctcATTTTTACTCTGGTGTTGATCAAAAGTAAATTAAGCTC CAACAAATTTAATCAAGGAAGCTTCCAGAAAATAAAGTGACTTTTTTATT GGTTAAAATTGATGTTGGCCATGAGAAACGCTTTGAAAAATGCCTCCTTT GTTTTAGAGCAATTTATTTTCGTTTGGTTATATACTCTAGATTAGGCTtg agaaatagaaaaattaccttttttatAGGTATTGGCTAAACAAGTTCTAA GACATTTTAGGTTGATTATTTTATCATGCTGGATGAGAGAGCTTAGCATA CCCGGTGGAaaaaccgtaaaagtggggaggctgaagactcaaatgggata aaattcgcactaggaatttgagaaaaatggttagaaaagaagattgtttt gttgttgggAGATTTTATTGTCGCTCTATTATATAGAATAAAAGCTTCGA AAATATTACAAAGTCTGCCAATCTTTGGAATTATCAATTAGTTTGAAAGG GCCTTCGGAGGTCAAATGACGTAGAATTTCGCCCACTCATATTAAGATTT GTCAACTGTTAAAAAGCTAGGCAAGAAGAAATCGATAAAATTATTAACAT TGAAAGCAAAAAAAGGGAATCGATAGGGGGAAAGTAataattattcaatt tttatgtttctatatttctattttcactCATCTTCAAGTGGCTAGTACAA TAGGAATATAGATTGAACAGTAACGAGTGATCTATTTTTTTCACAGCGAA ATTATTTATGTGGCCACCAAGAGGTATTCGTTCGAAAAcagttttctatt tttttaatattttcctacgttttttcttccttttttccttcAGTTTTGTT GCAATGGGGAGCGTTGTCAAAGAGAAAACGAAGAAacgaaaaaatattaa gaaaggAACGAGCACGAAAAGCCAAGACTACGAAATCGACGATCTAATTC AAGAGGAGTTGAAAGACGAAGAAATACGCAAACNCAACCAGCACGAAAAG CCAAGACTACGAAATCGACGATCTAATTCAAGAGGAGTTGAAAGACGAAG AAATACGCAAACAAAGACAGAAAGAATTGGACGAAATCACACGTAACACT GCTTTAGATCTCGTAAACGAATTTATAGAGAACGAAACTAGAAGTTCGTT CAAACGTAACACAAAAAAGTCGACCGCAAAAGCGTCGAACGTCGATACAG AAAAACCAGTTAAaccgaaaacaaagaaaaagaaagcgaaGAAAGAGACA ATCTTAGAGATGGAGGACCACGAGACCAAGATCGATTTATTGCACCTAGA TGAAGAGAACACCCAGTCACAAACGTCTGTGAAAAGCGCAaccaagaaga aaacaaaacccaaacagactaaaaacaaacagaaatgGGAAACATTTGAG GAGAATTCAACAGAGAAATCAGCTTCAAATAAAGAAGGTACCGAGAAAAC gacaaagaaaacgaaaaagcCAAAGGTTAATAAGATCTCACCAACTCCGC CTCCCGATAACGGTCAGCAGGATCGTAAGAAACGGATAAGCAAAGATACC AATGATTTGAAATTACAGAGTTTCTCTGAGGATACCGATTTAGAGGTTGA TAGTTCATGCTTGACCATGCTTCTTATGGCAATCTCACTTGAAAGTGAAC TACCACCGAAATTCTACGCAAAATTATTGAATAGTAAGCGATTTAAGGGA GCCTTAAAGAACATGACTCTTGAAGAACGAGAATTAGTGCTTGCCATGAT GAGTGATGTGGAGCCTGAAGTTGATTATTTGCCGatcagaaatgaaattt tcattgatAGTTTCAAAGATCGTTTGACCGTCCCAACTTAAAAGATATGG AGAACTTCTTACCATAAAAGTCTAGGGTAATAAGAGGTATCGAACAGTCA GTAAAACtgaaattcttaaaaatgaaaagttcttctTCGCCGAAGAGACC ATCAGATTGTATATTGAAAGGTCAAATGTAAACTCTTGCGAATGCTTATT AAAATGATGTGATACAGTTATGAGAATTCAAATACGGTATAATATGACTT TAGACTGgattttcaagttaaaaaaagGACGATAAAAGCAACGCAAACTG GCATAAAACCAAAACACCCTTAATATAATCGGTCTCGGACAAACGGTTTA CTGGGATGCAACAAAATCTCATTGTCATTTACGAATGGGatgttact
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000834XLOC_000834Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001600-exon-sc0000011-1491911889:750730..750916TCONS_00001600-exon-sc0000011-1491911889:750730..750916Clytia hemisphaericaexon
TCONS_00001600-exon-sc0000011-1510915933:750730..750916TCONS_00001600-exon-sc0000011-1510915933:750730..750916Clytia hemisphaericaexon
TCONS_00001600-exon-sc0000011-1575043694:750730..750916TCONS_00001600-exon-sc0000011-1575043694:750730..750916Clytia hemisphaericaexon
TCONS_00001600-exon-sc0000011-1491911889:766323..767676TCONS_00001600-exon-sc0000011-1491911889:766323..767676Clytia hemisphaericaexon
TCONS_00001600-exon-sc0000011-1510915933:766323..767676TCONS_00001600-exon-sc0000011-1510915933:766323..767676Clytia hemisphaericaexon
TCONS_00001600-exon-sc0000011-1575043694:766323..767676TCONS_00001600-exon-sc0000011-1575043694:766323..767676Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:750730..767676 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.20653 0 0 6.88704 7.25122 2.53134 5.15213 0 2.01404 0.589206 0.915513 0.156166 0 0.82583 0 2.07934 4.30274 3.17314 1.08581 0.767502 1.15507 1.43739 1.28284 0.754217 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001600 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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