TCONS_00001574 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001574
Unique NameTCONS_00001574
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3618

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001574 ID=TCONS_00001574|Name=TCONS_00001574|organism=Clytia hemisphaerica|type=transcript|length=3618bp
ataattttgcTTTGTGTGTCGTTGGAATAGAACTTTTAATGTGGCTTTCT
TTTTGTCAATACAGTCAATATGTGTTTTTTAAGCTCATATAGATAGCATA
GCTAAAGAGAAATTGACTTATTAATGATATCGTTATGTTTTGTCAAGTCA
TAAACTTTGAGAGGAAATTCGtgttgttttgaatatttttaactgGAAGG
AGTGGCTCGAGTAGTAGTTCAGTAGTGATTTCCATTCAGTTTTTGGTGAT
ATTTGACTGCAGGAATTAAAACAATCAATTCCATCAGTCGATAGCTCATT
ATGGCTCAGACAGTAAAGACAGCAAAGACTTTTATAGTCCATATCGATGG
CACATTAAATACTCAAATTTCttcattcaaaacaaagtttcttGCACCTC
TCGTCTTTGCAAAACCAATCGAAAccatcaatcaaatcaaaatgaaagaA
GAGGATTTGCAGACCAAATTAGAAGAAAAATTGACAGAATTTCACGCGGT
CTTCATTGTGACATCTGAAAATTTCGCTAAatttttcaacgatgaaatga
ATAAGGGGAAAACACACGAGGGAATATTACCGTCACCTTTGTACGAGAAT
TCAGAGGTCACTTATGACACATTCAAAACATTCTTTGATTCAGAAGTTCA
AAAGGAAAAACCTAAACTATTTTTGGTATACACTCTTGATGACAATGGAG
ATAAACTTGATGCACATTTACCTAAATGCCTCGATGGTTTAAAGGCGAAA
GGTAATGTTATTGAGGTATCGttgaagaagaaagataaaacaACCAAAAA
ACTGATCGGTTATGATAAAGTATGCGGACATGTGCGTGCTTTTCTACCTT
AAGCTCGATAAGAAGTCCTGCCGAATCAAGGAGTGATAATTTTCAGATAA
TTTATGatgataaaaaaacataaaaaattcaaacattaCTACGCGCAGAG
TACAACTACGATTCGTTTCGCATAACAATCGACATTGTagtttttcaatt
ataatttgcTTGTTTTCCATAATAAAAAAGTACATGCAAGATATAACAAA
GTTAATGAACATTATTCACTAAATTATTACGAGCTTTTTGCGGCTCTTTT
ATGTGCTAACATAGATTTACTTTTTCATTCAGTTACTGTAAAATTTACCA
TAATGAACAGCATGTAAATAAAGTcttaaaaaacaagaaaaaataatttt
cttccaTGCCATTTCTTCAGAGAGTGAGATGAGGAACCAATGCGATTACG
GAGAAATTTTGAGTCTTCATATTTAAAATTCGGTGGGTCTTCAAATTATT
ACATTTTGATGTCCGGATAGAAATTCCGGAAAAATGGGTGAAAGATacca
aaaaagtaaacaaaccagAGAATggcttatttttgaaaattataaatcAG
TCTTTTGGATTTGAAATACATTTTTGAATTGTGGAAAAAGAGATGTATGA
TAGTACTAAAGATAGTATACCACTGATGGAGCAGAAAAACCAATCAGTTG
TTGACATTTCTTCACACAGTGACTTCATAAAAAATCCCTTTCGCCATGAT
GACTCCAACTACGATTTTTGGGAAAAGGTTAATAACTTACACAATGAAGG
AAAAACGTGGGACAATGCACTCACAACAGTGCAAGCAGAAGAGTTCAAAG
AAAAATGCGATGATAAGGATCCAATTATGTGCTTACTTGAAATACATGAC
AGATTCGTTAATCTAGAAGGACTTGAGGATAGACAATTGTCTGGCTTTAT
CAGTCAGTTCACAAAACTTGGAGCAAAGATTTTACAAATTGATAAAGAGT
ATGCAGAGGCAAATGATGAGTGCCCGGTGTATGAAGATCCTTTCCCTGAC
AGTGAAGATCAGACCCTATTGCATATCTTGGCTTCTAAAAACCTTATTGA
TCTATGCGAGATCTATGTAAGAGATTACTACCCTGATCATCTGTACGCAC
CAACTGATCCTCAAATGCAAGAAATTTCTGTTGAAGATGGTAACAGAAAA
AATGCTTATAAGGGTCCCAAAGTTCCCTTTGAGCTTGCGTATGAGAAGCA
CCACGATAAAACAGCAGCATTCCTAGCTGGAGAAATGAAGCCGTTTAGGC
TCCGGCAATTATTTGAACGACGAGACGATGGAGTTCTTCAATGTAGCTTT
GCAGAGGTTATTAATAATGATATGCAGTTAACAGCTATTAAAGTACTTGA
TAGTTGTATGAACCCTGATTGGCCTTACGTACCGGTCAACCCTCTTGAAG
AAGATGATGAAACTCTGTGTAAATTGAAGGATGACCCTACTTCATATCAT
TTCTATTATCACATACTGGATAGTGACCAAAGTGGTCGAGCACCTAAGAA
GCCAGTTGAAAGCGAGGCTGAAAAAGATAGGTTCAACCACATTGAATCGT
CTCCATTCCAACTCTTGGTTACAAATAAAGTCACCAAACAGGCGGCTATT
TCTCACCCCACTGTTCGTGGTTTAGTGAATAGAAAATGGGAGCACTTTGG
AGAGACTCGAGTCAAAGTGTTTCTAGGCTTTTATATACTCTTTCTGCTGA
TGTTGGCGCTTGGACTTTTCTTCAGTGAAGATTGGGGATCTAATGTTGAC
ATTGTCATCAAATTGATCGTTGTCATCTTCAATATTGTTTACACCTTTGA
AGAAATCGACCAAATGACAAAAGAAGGCCGTGATTATCTTGCCTGGACCA
ATCTATTTGATTTACTTGGTATCCTAACAATTTATGCGTTGATTCCTCTG
TACGCGTTTGGTGAATACAAGATATATTATGGAGTTGCATCGGCTGCTTT
TATCCTCAACTTCTTTCGCGTGCTGAAATTCTTCGCAACTTTTGAAGTTG
GAAATTATGCAAGAGTGTTTATGTTTCTGTTGAAAGAAGACGTTTGGGTT
TTCCTTCAATTCTTTGCAGTCCTCATGGTTGCATTCACTGGAGCTGTTTT
CTTGGCTTTGAAATCCGAAATGTCCAATGGCGGAAAAATAATCGATGGGC
AAAATGAAACGTTGACAATTTGGTCAACCATGTTAAGAGAAGCACGTGCT
CTGGCTGAAGGAAAAGAGTTTGCTGATGACTATGATGGTGTCTATACGGC
TCCACTTATCATTTTTCTCTTACTCAACATGGCGGCCATTATTGTGGTTC
TGAGTAACATTTTGATCGGTCAAATCAGTGCACGTTATGAAGACGCTGCA
AAAGATGCCAAAGTCCAAAGTGACATTGCTAAAGCAAAAGTCATTTGTAA
AATTGAGAAAAGTCGATTCGTTTGGAGGAATTTACGAATCAAATATTACA
CACCAGGCGACTATGTAACAGATGAGGGTCTCGTTAAAGGTATACTTTAT
CGGCTCACTTGTGATCAAGAAGtacacgtttttgttttttttaagaaaca
cacttttaagaaacatgaggctcagaatgcctaaaaactaagaaacatct
aagaaacatgctgaagctgagaatgagaaaataacattttttaattcgtt
ttttttaagaaccttccaatccagcctttcataaggctgattatgtcaaa
aagtttagaaacatgtaagaaacatttaaggctcaaaaggccgatttctt
aagaaacattgaggctgc
Run BLAST on NCBI

transcript from alignment at sc0000011:169602..181372+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001574 ID=TCONS_00001574|Name=TCONS_00001574|organism=Clytia hemisphaerica|type=transcript|length=11771bp|location=Sequence derived from alignment at sc0000011:169602..181372+ (Clytia hemisphaerica)
ataattttgcTTTGTGTGTCGTTGGAATAGAACTTTTAATGTGGCTTTCT
TTTTGTCAATACAGTCAATATGTGTTTTTTAAGCTCATATAGATAGCATA
GCTAAAGAGAAATTGACTTATTAATGATATCGTTATGTTTTGTCAAGTCA
TAAACTTTGAGAGGAAATTCGtgttgttttgaatatttttaactgGAAGG
AGTGGCTCGAGTAGTAGTTCAGTAGTGATTTCCATTCAGTTTTTGGTGAT
ATTTGACTGCAGGAATTAAAACAAGTATGGATTTTGTTGTTGCTTTTGTT
TACTATTGtgttttcaaaacaagaaattacttgaatttattgaattttgt
gGGGGAAATTATAAACCGTTTATACTTTTATTCAAATTACAGACCAAATT
TTGTTATGCTTGTAATATATAACAGTTCCCTTACATAGCTCCTCGAGGAT
GGGTGGATTGTAAACATGAGGGCGGAATTAAATCACCATTTTCTGAGGAG
AGCATTCCGCCAATTCTCCATAAATAATTTTAAGATGATAAAAAGTATTT
GGCTATTTTAGAAATCCCTTTAATTTCAAAaggtcaattttcaattatat
tggattttgaaatttaactgattttttaaattctatttcAGTCAATTCCA
TCAGTCGATAGCTCATTATGGCTCAGACAGTAAAGACAGCAAAGACTTTT
ATAGTCCATATCGATGGCACATTAAATACTCAAATTTCttcattcaaaac
aaagtttcttGCACCTCTCGTCTTTGCAAAACCAATCGAAAccatcaatc
aaatcaaaatgaaagaAGAGGATTTGCAGACCAAATTAGAAGAAAAATTG
ACAGAATTTCACGCGGTCTTCATTGTGACATCTGAAAATTTCGCTAAatt
tttcaacgatgaaatgaATAAGGGGAAAACACACGAGGGAATATTACCGT
CACCTTTGTACGAGAATTCAGAGGTCACTTATGACACATTCAAAACATTC
TTTGATTCAGAAGTTCAAAAGGAAAAACCTAAACTATTTTTGGTATACAC
TCTTGATGACAATGGAGATAAACTTGATGCACATTTACCTAAATGCCTCG
ATGGTTTAAAGGCGAAAGGTAATGTTATTGAGGTATCGttgaagaagaaa
gataaaacaACCAAAAAACTGATCGGTTATGATAAAGTATGCGGACATGT
GCGTGCTTTTCTACCTTAAGCTCGATAAGAAGTCCTGCCGAATCAAGGAG
TGATAATTTTCAGATAATTTATGatgataaaaaaacataaaaaattcaaa
cattaCTACGCGCAGAGTACAACTACGATTCGTTTCGCATAACAATCGAC
ATTGTagtttttcaattataatttgcTTGTTTTCCATAATAAAAAAGTAC
ATGCAAGATATAACAAAGTTAATGAACATTATTCACTAAATTATTACGAG
CTTTTTGCGGCTCTTTTATGTGCTAACATAGATTTACTTTTTCATTCAGT
TACTGTAAAATTTACCATAATGAACAGCATGTAAATAAAGTcttaaaaaa
caagaaaaaataattttcttccaTGCCATTTCTTCAGAGAGTGAGATGAG
GAACCAATGCGATTACGGAGAAATTTTGAGTCTTCATATTTAAAATTCGG
TGGGTCTTCAAATTATTACATTTTGATGTCCGGATAGAAATTCCGGAAAA
ATGGGTGAAAGATaccaaaaaagtaaacaaaccagAGAATggcttatttt
tgaaaattataaatcAGTCTTTTGGATTTGAAATACATTTTTGAATTGTG
GAAAAAGAGATGTATGATAGTACTAAAGATAGTATACCACTGATGGAGCA
GAAAAACCAATCAGTTGTTGACATTTCTTCACACAGTGACTTCATAAAAA
ATCCCTTTCGCCATGATGACTCCAACTACGATTTTTGGGAAAAGGTAACa
cattttttagttttcttttttactaTAGCTTAGCAATATCAGTTTGAATT
CTGTTATTAAAATATAATCGAAAGTGATTGAAATAATCGAACAACCACTT
ATTATATAtgaatctcttttatcaccagtAGAATggtatataaacaaaaa
tatgtacaggttaaaaagaagaaaataatcaacataaaagggcttgcgga
acgagcgttctgttttcgcaaagcgaagaaatctaTCTCAAAATGTACTA
CTCCATTATTAATTAATgcagaattacaaaaaaaagaaaaactaatagGA
CCTTACAATTCACGTTGAATGTATTGCCAGTGAGAATGTTTAAGAAATTA
GAAATGTATGAAGACAGAGGTGTTCCAAAAGCACCTGGGGGTATTTGAAA
AGTCATTTTGTGATACTTTTATAacagctttaaaaaattttgctgatcaa
aattacaaaaatatctgCTCAATACAACTTTCCACAGGGTAcagtaaaat
aacaaaagataatatcaaaaataaaaaataaaactctaaaaatttgcATC
ATAGCTCATATTGAGAGTATTCTATACATGGCTtttgaactaaaaataat
ttgatgtgtCTTAAAAAAAGCATCATGTAGtctttcttttgattgttttg
ccTTTGTAGTTTTTGAATATTCAAGGTGAAATCGTGATCAagaaaataga
gcttttgataAGTAGGATGTCCTAACTAatcaaaaaaacaaatcttGCAA
TGACTTTTACCCATCTCTTGTGTATATAAACCTCTTGGAACATTATTAGA
TTGTAGTAAGACAGCAATCATTGCATTCAAACATTCACAATTTATCCCTT
TCTTGTGTTGTATTATATCGAAATTGTATATATTGGACGAGGATTGAGAA
AAAATACCATTATATGCTacaaatttccaacatgtttcgaCCAGAGCAGT
TTTCAAGGTATCGAATTGTATTTTATCGAATCTGGATGATGGGAATCGTG
TAATgtttgcttgatctcaaaccacaacaaagtccttataattttataat
gatTAAAAACTCCTGAAAATATTGTGTCTCCTCGCCTCAACGAATATTAC
TGACCACAATCACCCAATATTCAATGTTCTTTTGTAAAAGCGTTACTCAA
ATTGTTAAACAACGGCAAcgtgacaaaaaaatcattgtttggcAACAATG
CCCGCTGAATGTAAAATTTAACGATGACATTTCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATGCATCCAGtag
cttaaaaaatcagcaggattctgccttgacaaaaatcgccatctttgttt
atgtttcgcaagtgtgcaaaagtgaaagtagcaaTGACACAAAAACAgac
atctcgcacttgattggatagtcaaactcgatataattttagTACTACTT
TTACTTCTTTCAAAAGTATgtttattaaaaacaaaaaactacaaaatcag
aaccaaagttttacttaatttaattttcaataaaattacgAGGTAAGTGA
TTCTTTTTGCTGGCTAGACAGGTGCCATTTTTCAATACAGAGCAAAGTCG
ACATTTTTCGTTGGAGGTAGCAGTTTTGGGGACATTTTTTTGAACatata
tacaaatttacgccccgcgtacgcagatcttgccaaaggatgctacactc
cctattcgggcgcttcgcgccctcaaaacggtcgttccgcaaaaacAAGA
CTACGTTAAATATAATACATGAACAGTCAACATGCGAGAACAGGGACGGA
TTTGAACAGGATAAAAGAAAGAAGTAAAGAGACAGAGGTCAGATCCCTGT
TCTCGCTCTGATGACGTGTTCTTCTAACATTGCTTTGAAAGCAACCCGAT
TATCATAAACATGCCAGTTTTGAATATAATCATTGTACTTAATCAAAGAT
ATCTGAGGGCAGttgatcaaaacattgaataatACGGTGTCTTTTGCCGA
GTAGTGTTTCTGTGAAGGATATGTTGTTAAGATCGATTATTCTTTGACAT
TTGTTGAGAAAGCTGAATTCTACGTTCGTGTGAGTAGACAGTAAAAAGCA
GATATAACTCTTGGTAGATTCATTAAAGCACTAACTGCCTGAGTAAGTTC
AGACGACGTTCATCGATAATGCTGCATACATTGGGAATACTGTACAGTCG
ATGAATGTCGTTTTTGCTTCTCTTCGATACATTGAATAGAGATTTTAAAC
AAGCTGTGGTTCTTTAAGCATagatgatttttcttttattgattaacaat
tgaatttcaagtaccaaaatttcaaaaaaattgtgagtattcaatCACTT
TATTTTACCAACCATTCCAAGACTCGATCAACCGTTtaagtactttgatt
gttattacATTAATGTGTCATTGCTTTAATGCTagaattttaaattattc
aacatgattCCTTAAACTAGCAAAAGGTCTTTTTATTTCTCTGTGGAACA
AAAGCAAGAAAgaggtaacctgataacagctgttcataattttcttacgc
gcacagtaaacctctgaaggcgcttgaaaattgaacatctgaAGGAAAAG
AGTCTTCCCTGggaaattctacaacaagaatcttttgtgcgccagaaagt
caaaaactcaTATGGCGCCCTATGGTCATTAAACACGTTAATTAaatctg
ctgacgtcagcaaaatatttaaatttttttcttggatCGTTTCCTTTTAT
TGATTTAcacattttgtaaaatttgaagtcaaaagCTTTCTCCTACTAGA
AGttattcaaattcttatttctgtgtaaaaatcataaaaattgattaaaa
aattagttttttttcaaaaaattttcagcaaGTGAGACCATTTGACCATG
CCTCATCTCATTTTCTATATCGAAATGCTttgaaaaacctaaaaaacatt
TACGCTAAGGGGAGAAACTTAATGCAACCATTGGGGAGTGCCTTAGGTAC
CCCGAGATCGCTAAGTATAATCAAGCCTATTCTAATAAAATCTTAAGTAT
CCATTGATCTTCAATAGGATTTTTTACACAATTGGCTATCCATTAtgacc
aatcaatcaatcaataggTTATTAAActtccaaaacttttaaaacaggct
ttaaatgattttccttcaaaaatacataaaatgattttccttcaaaaata
cataaaatgattttccttcaaaaatacataaaatgattttccttcaaaaa
tacataaaattattttccttcaaaaatacataattagtttccttcaaaaa
tacataagattatttttcttcaaaaaaatacattttccaATCAAAGATGT
ATTTTCTTTTCAGTGTTTTGGAGATTTGCCTACCCTGAATCCTTAGTGTA
GATCTATTTAAGCAGTCTTAGATTCCAAAGATAGTCCAATTCTTTATGTA
ATTCATTTGTATTTGAAGGTGTTCTTTTAAATCCTTTCATTCTGGGTAAA
CATAAAATGAATACTTTTTTTCATCAGGTTAATAACTTACACAATGAAGG
AAAAACGTGGGACAATGCACTCACAACAGTGCAAGCAGAAGAGTTCAAAG
AAAAATGCGATGATAAGGATCCAATTATGTGCTTACTTGAAATACATGAC
AGATTCGTTAATCTAGAAGGACTTGAGGATAGACAATTGTCTGGCTTTAT
CAGTCAGgtatattgttttattttaatgctttttgaaagGAGCAAACTCA
TAGTAATTTTGCAAGTGTACTGAACTCCAATTATTTGtatgggaaatttt
tttttgtgaaagtgACTTTTtcagctattttacaaattgatGCATTTTTC
TGCTATGAAATAAGCTGACAAGGTTTTTCGTAAAAAATCCGTTTTTCTGA
TTATAAAGAACAACCATAAATACGTATATAGAAATCAAAGACTTAAGTCA
TTTGACactaattttttccaaaatctacATTTTTCTAGTTCACAAAACTT
GGAGCAAAGATTTTACAAATTGATAAAGAGTATGCAGAGGCAAATGATGA
GTGCCCGGTGTATGAAGATCCTTTCCCTGACAGTGAAGATCAGACCCTAT
TGCATATCTTGGCTTCTAAAAACCTTATTGATCTATGCGAGATCTATGTA
AGAGATTACTACCCTGATCATCTGTACGCACCAACTGATCCTCAAATGCA
AGAAATTTCTGTTGAAGATGGTAACAGAAAAAATGCTTATAAGGGTCCCA
AAGTTCCCTTTGAGCTTGCGTATGAGAAGCACCACGATAAAACAGCAGCA
TTCCTAGCTGGAGAAATGAAGCCGTTTAGGTATAATGAATTTAATCTGAC
TGAGAAAACAGGGCTAAGAGGATACTCGAAAAAGTGAACAACAAAATTAT
AAATGATTCGCCATTAATGATACGTGTCTTATGTATAAAATCTTTTGGAC
CTTGTCTCTTGTATAACTTTTTCCACCGGATTTAAAAGTATTGGGAGTGC
TTGCCTTTGTATTGATACATCCTGCTATACACGATATACACGATTCCTAT
AATGCTTTCATTGTCTTACTATATGTATTTTTCATGATTCAGGCTCCGGC
AATTATTTGAACGACGAGACGATGGAGTTCTTCAATGTAGCTTTGCAGAG
GTTATTAATAATGATATGCAGGTAAAGTTTGAAGTTGAATTGACAATCTC
CCAAGGAAAATGTTGGATTTAAAGTTAACGTTTGGGTTTGTTAGTCTAGA
AATTTTCCTGCATGATTTTCTTTGCATAACCTGATCAGAGTGTCCAAAGA
ACTTTTATATTCATCCCCAGTCATCCCACTATGGGTAAAAAGTCAAAGTA
CCCGCAAACCATTGTGCTATCTGGTgtaatcaaatttgaaaaaatagcct
aaataattttttcattttctacagTTAACAGCTATTAAAGTACTTGATAG
TTGTATGAACCCTGATTGGCCTTACGTACCGGTCAACCCTCTTGAAGAAG
ATGATGAAACTCTGTGTAAATTGAAGGATGACCCTACTTCATATCATTTC
TATTATCACATACTGGATAGTGACCAAAGTGGTAAGTGTATCTCTCGTGA
TTTTAAAGCGAATTTTGTCAACAAGTCAATAGtattagtttaaaaaaaaa
gaacttgTACCTAGTTTCGCCCTGGATGCATGATTTTGATACCAAAAGGC
TCACTGTTCTTAATGAGCACCACACCAATCCCTGTTATACTGAACTTGTT
GACCTTAGAATTCCATAAAATTATAATGTCTCAATAGATATAATACTCTT
CACGTACAAATAATTATTCTTCATTGCTTTGACCTTTAAAATTTACGAAT
TCACGGGAATTGGTATGGTAACAGAATACCAACAGAATCGAGTTATTTAT
TGAACCTTGAAAGATCCAAgcaaaatgcaaaataatttgATCCAACGTTC
CCATATTTGTTAGGTCGAGCACCTAAGAAGCCAGTTGAAAGCGAGGCTGA
AAAAGATAGGTTCAACCACATTGAATCGTCTCCATTCCAACTCTTGGTTA
CAAATAAAGTCACCAAACAGGTTTGATTCCTTTAGATTTATGACTCTGTA
CTTGGCCTTTTTACATAccttaaaagtaaataaatttcGCTCTTCGAAAC
CTTTACANCTTTTTACATAccttaaaagtaaataaatttcGCTCTTCAAA
ACCTTTACATGATTTCACGATAACTACTCTGCACTAGTGTGCATCTCGTG
ATTATAGCTCCTTTAGATACAGTGCTTGATGATTCAGAGAACAAATTAAC
TGGTTTCCACGTTAAGtcggtaaaaaaacttttctttctaAAGATTCGAA
AACGTGTAATATTTACGTACTTATTCACGTATTTTAATTTCGTTTCTTTC
ACAACAGGCGGCTATTTCTCACCCCACTGTTCGTGGTTTAGTGAATAGAA
AATGGGAGCACTTTGGAGAGACTCGAGTCAAGTAAGCTTATTTGCTAGTT
GTCAAAAATTTAAGATGTCTGTAGATCTCAAACCTATGATACAATAGAGA
TCACCATATTTATTATGGTTTTTGTATTTAGACACGTGACATGTTTATGA
TTTTGATTAGCAGCGAATACAGcgaatgtttacaaatttcacTAGAACTT
CAATGTCCCTCTAGTTGGACGTTACTCGTGTATCGCATTAAAGTTATTAC
CTGTCAATAACAATAAGGAAATACAAGAAAATAGTTTTGAATAGTTtagt
tttaatatttttaattaatttatatTAATTAATTTCTCTATTTAGAGTGT
TTCTAGGCTTTTATATACTCTTTCTGCTGATGTTGGCGCTTGGACTTTTC
TTCAGTGAAGATTGGGGATCTAATGTTGACATTGTCATCAAATTGATCGT
TGTCATCTTCAATATTGTTTACACCTTTGAAGAAATCGACCAAATGACAA
AGTAAGAACCGAACTTTGGCCAAATTCTGTTTATTTCAAGAATTTCATAG
GATGAATGGctattgttttttgattttaagatCTCCACCATTTTGagctt
tgtttttctttagtttCTTAAAATGAGGAAAGAGTACCAGGAATTAATCA
ATTGTTGTTGAATAtctattcattctttttttttcgatttttacagAGAA
GGCCGTGATTATCTTGCCTGGACCAATCTATTTGATTTACTTGGTATCCT
AACAATTTATGCGTTGATTCCTCTGTACGCGTTTGGTGAATACAAGATAT
ATTATGGAGTTGCATCGGCTGCTTTTATCCTCAACTTCTTTCGCGTGCTG
AAATTCTTCGCAACTTTTGAGTAagtttttgaattctttttgatttttgt
taatCGTAGTGTTTTTCTGAAACTTTGATTTCCGGGCCTGAACAAGATTT
TCCCGAAATGAGCCCAGAACAGTTTGCCTTTGGCTTGGGGCACTTTCTTG
GTGAATACGGTATTTTTTCTTCTCCTTTCGAAATAACTAATACTAATAAC
AACTTTTCACTTATAGAGTTGGAAATTATGCAAGAGTGTTTATGTTTCTG
TTGAAAGAAGACGTTTGGGTTTTCCTTCAATTCTTTGCAGTCCTCATGGT
TGCATTCACTGGAGCTGTTTTCTTGGCTTTGAAATCCGAAATGTCCAATG
GCGGAAAAATGTAAGTAATAATATAAAGATTTAATGTAAAGATTCCTCAA
AGGTTTTCTACGGGAATAAGATgagcttattttaggcagtgTCTTCATGC
TGAGTCAGATAAATTAAAGCTAATTTTTAACGCAACGATATTctgcaaac
aagtgaaagatcgaaagttgtttcgaggtgtgacctcacattctattgtt
tttgtaaacaaaaaatagcaaagtcgATTTCGAGCAAATTTAAAATCCAA
ACGTTCTATTTATtctaaacataaaaacattcgaaagagtcCCTTTGTTT
GAGATATGTTGTattattcaatgtattttcattttttcaaaacctttttc
taatcttgtcgcacttgtttttactacatcagcatcatTAGATCTTTCAA
TGAGAACAAATCCTTTTAAAGGTACTAATATTTGGAGGTTGTTTGTGTGT
AAttaaatttttccaatttttggctGTTGGAAGAATACATGCTGTTATGT
GGACcttatttttcatttgagaaacttaaaaaaaacttgtgaAGAAGAAT
TCGCAAAAACTGCAAAATTTTCATTCTCGAAAAAGTTTTAATCGTTTATA
GCATAGTTTTTATCTCTTTTTCATAGAATCGATGGGCAAAATGAAACGTT
GACAATTTGGTCAACCATGTTAAGAGAAGCACGTGCTCTGGCTGAAGGAA
AAGAGTTTGCTGATGACTATGATGGTGTCTATACGTAAGTTCAATTGGTA
CCAGATCTCCTAATTGATCTTAATTTTAATTATCTTGTCCTATACAGTAG
AGTGTCTTTAACTCACACCTCTGTTACTCTGTTACTCaaagtctccttaa
ctcgaacaaatctgTTCTCCCAGtgggtgttcgagttatggagactcagc
TGTATTATGTTTTAGTTTTAAATAAATTACAAGATAACTTAATGGATCTA
TTTCTTTTTAGGGCTCCACTTATCATTTTTCTCTTACTCAACATGGCGGC
CATTATTGTGGTTCTGAGTAACATTTTGATCGGTCAAATCAGTGCACGTT
ATGAAGACGCTGCAAAAGATGCCAAAGTCCAAAGTGACATTGCTAAAGCA
AAAGTCATTTGTAAAATTGAGAAAAGTCGATTCGTTTGGAGGGTAAGAGA
CTTGTATATTATTAAGTTGTCTTTGATCTTCAGTCATTATCTATTttatt
actttaatcgtagaaattttagcgagattaattttagcgtatattagcga
gtcaggaaaatcttgatttttttggatttattttagcgaatcacgatttc
aaaaaatttcgcgtggataaagtttaccgaatactcgtattacattattg
actgaattcgaTTTCTAGTatatttctttgcactgaaacccttcctattg
ataaaaatgtatcagcAATATaagcaatataaccagaaatttcgcgcgga
taaattttagcgatctgtcgattcggcgtgttttagtgagatttatttta
gcgaaaatagggaaaactctaAAATTAGtcttgctaaaatttctacgatt
aaagtagtctagcatgctagacgactgcTTAACACATTgtataacaccca
tattactgtattgcaaggattataaacgactccagtctactatTTTTTGA
GTGATAAGAATGATATGAAGTTGAAGTCCCTCCCTTTAAGTATTGTTTGC
ATTGGCTCATGCGTTTTCTCTTTGTATTTAGAATTTACGAATCAAATATT
ACACACCAGGCGACTATGTAACAGATGAGGGTCTCGTTAAAGGTATACTT
TATCGGCTCACTTGTGATCAAGAAGtacacgtttttgttttttttaagaa
acacacttttaagaaacatgaggctcagaatgcctaaaaactaagaaaca
tctaagaaacatgctgaagctgagaatgagaaaataacattttttaattc
gttttttttaagaaccttccaatccagcctttcataaggctgattatgtc
aaaaagtttagaaacatgtaagaaacatttaaggctcaaaaggccgattt
cttaagaaacattgaggctgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000821XLOC_000821Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001574-exon-sc0000011-1491911889:169602..169875TCONS_00001574-exon-sc0000011-1491911889:169602..169875Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:169602..169875TCONS_00001574-exon-sc0000011-1510915933:169602..169875Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:169602..169875TCONS_00001574-exon-sc0000011-1575043694:169602..169875Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:170243..171545TCONS_00001574-exon-sc0000011-1491911889:170243..171545Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:170243..171545TCONS_00001574-exon-sc0000011-1510915933:170243..171545Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:170243..171545TCONS_00001574-exon-sc0000011-1575043694:170243..171545Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:175679..175858TCONS_00001574-exon-sc0000011-1491911889:175679..175858Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:175679..175858TCONS_00001574-exon-sc0000011-1510915933:175679..175858Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:175679..175858TCONS_00001574-exon-sc0000011-1575043694:175679..175858Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:176140..176480TCONS_00001574-exon-sc0000011-1491911889:176140..176480Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:176140..176480TCONS_00001574-exon-sc0000011-1510915933:176140..176480Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:176140..176480TCONS_00001574-exon-sc0000011-1575043694:176140..176480Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:176744..176822TCONS_00001574-exon-sc0000011-1491911889:176744..176822Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:176744..176822TCONS_00001574-exon-sc0000011-1510915933:176744..176822Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:176744..176822TCONS_00001574-exon-sc0000011-1575043694:176744..176822Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:177076..177232TCONS_00001574-exon-sc0000011-1491911889:177076..177232Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:177076..177232TCONS_00001574-exon-sc0000011-1510915933:177076..177232Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:177076..177232TCONS_00001574-exon-sc0000011-1575043694:177076..177232Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:177615..177721TCONS_00001574-exon-sc0000011-1491911889:177615..177721Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:177615..177721TCONS_00001574-exon-sc0000011-1510915933:177615..177721Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:177615..177721TCONS_00001574-exon-sc0000011-1575043694:177615..177721Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:178059..178132TCONS_00001574-exon-sc0000011-1491911889:178059..178132Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:178059..178132TCONS_00001574-exon-sc0000011-1510915933:178059..178132Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:178059..178132TCONS_00001574-exon-sc0000011-1575043694:178059..178132Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:178447..178602TCONS_00001574-exon-sc0000011-1491911889:178447..178602Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:178447..178602TCONS_00001574-exon-sc0000011-1510915933:178447..178602Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:178447..178602TCONS_00001574-exon-sc0000011-1575043694:178447..178602Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:178798..178971TCONS_00001574-exon-sc0000011-1491911889:178798..178971Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:178798..178971TCONS_00001574-exon-sc0000011-1510915933:178798..178971Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:178798..178971TCONS_00001574-exon-sc0000011-1575043694:178798..178971Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:179168..179311TCONS_00001574-exon-sc0000011-1491911889:179168..179311Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:179168..179311TCONS_00001574-exon-sc0000011-1510915933:179168..179311Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:179168..179311TCONS_00001574-exon-sc0000011-1575043694:179168..179311Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:179928..180035TCONS_00001574-exon-sc0000011-1491911889:179928..180035Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:179928..180035TCONS_00001574-exon-sc0000011-1510915933:179928..180035Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:179928..180035TCONS_00001574-exon-sc0000011-1575043694:179928..180035Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:180263..180443TCONS_00001574-exon-sc0000011-1491911889:180263..180443Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:180263..180443TCONS_00001574-exon-sc0000011-1510915933:180263..180443Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:180263..180443TCONS_00001574-exon-sc0000011-1575043694:180263..180443Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:181033..181372TCONS_00001574-exon-sc0000011-1491911889:181033..181372Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:181033..181372TCONS_00001574-exon-sc0000011-1510915933:181033..181372Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:181033..181372TCONS_00001574-exon-sc0000011-1575043694:181033..181372Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:169602..181372 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.366132	0.152161	0.309751	0.939079	9.90379	8.07329	22.2636	22.2812	18.404	13.9455	10.2572	15.0384	10.355	7.56144	5.75169	6.78046	10.329	10.9528	9.94185	11.1354	11.922	12.6713	6.3586	9.2949	6.69762	8.71232	12.8498	9.59371	0.918091	1.52577
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001574 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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