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TCONS_00001574 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001574
Unique NameTCONS_00001574
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3618

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001574 ID=TCONS_00001574|Name=TCONS_00001574|organism=Clytia hemisphaerica|type=transcript|length=3618bp
ataattttgcTTTGTGTGTCGTTGGAATAGAACTTTTAATGTGGCTTTCT
TTTTGTCAATACAGTCAATATGTGTTTTTTAAGCTCATATAGATAGCATA
GCTAAAGAGAAATTGACTTATTAATGATATCGTTATGTTTTGTCAAGTCA
TAAACTTTGAGAGGAAATTCGtgttgttttgaatatttttaactgGAAGG
AGTGGCTCGAGTAGTAGTTCAGTAGTGATTTCCATTCAGTTTTTGGTGAT
ATTTGACTGCAGGAATTAAAACAATCAATTCCATCAGTCGATAGCTCATT
ATGGCTCAGACAGTAAAGACAGCAAAGACTTTTATAGTCCATATCGATGG
CACATTAAATACTCAAATTTCttcattcaaaacaaagtttcttGCACCTC
TCGTCTTTGCAAAACCAATCGAAAccatcaatcaaatcaaaatgaaagaA
GAGGATTTGCAGACCAAATTAGAAGAAAAATTGACAGAATTTCACGCGGT
CTTCATTGTGACATCTGAAAATTTCGCTAAatttttcaacgatgaaatga
ATAAGGGGAAAACACACGAGGGAATATTACCGTCACCTTTGTACGAGAAT
TCAGAGGTCACTTATGACACATTCAAAACATTCTTTGATTCAGAAGTTCA
AAAGGAAAAACCTAAACTATTTTTGGTATACACTCTTGATGACAATGGAG
ATAAACTTGATGCACATTTACCTAAATGCCTCGATGGTTTAAAGGCGAAA
GGTAATGTTATTGAGGTATCGttgaagaagaaagataaaacaACCAAAAA
ACTGATCGGTTATGATAAAGTATGCGGACATGTGCGTGCTTTTCTACCTT
AAGCTCGATAAGAAGTCCTGCCGAATCAAGGAGTGATAATTTTCAGATAA
TTTATGatgataaaaaaacataaaaaattcaaacattaCTACGCGCAGAG
TACAACTACGATTCGTTTCGCATAACAATCGACATTGTagtttttcaatt
ataatttgcTTGTTTTCCATAATAAAAAAGTACATGCAAGATATAACAAA
GTTAATGAACATTATTCACTAAATTATTACGAGCTTTTTGCGGCTCTTTT
ATGTGCTAACATAGATTTACTTTTTCATTCAGTTACTGTAAAATTTACCA
TAATGAACAGCATGTAAATAAAGTcttaaaaaacaagaaaaaataatttt
cttccaTGCCATTTCTTCAGAGAGTGAGATGAGGAACCAATGCGATTACG
GAGAAATTTTGAGTCTTCATATTTAAAATTCGGTGGGTCTTCAAATTATT
ACATTTTGATGTCCGGATAGAAATTCCGGAAAAATGGGTGAAAGATacca
aaaaagtaaacaaaccagAGAATggcttatttttgaaaattataaatcAG
TCTTTTGGATTTGAAATACATTTTTGAATTGTGGAAAAAGAGATGTATGA
TAGTACTAAAGATAGTATACCACTGATGGAGCAGAAAAACCAATCAGTTG
TTGACATTTCTTCACACAGTGACTTCATAAAAAATCCCTTTCGCCATGAT
GACTCCAACTACGATTTTTGGGAAAAGGTTAATAACTTACACAATGAAGG
AAAAACGTGGGACAATGCACTCACAACAGTGCAAGCAGAAGAGTTCAAAG
AAAAATGCGATGATAAGGATCCAATTATGTGCTTACTTGAAATACATGAC
AGATTCGTTAATCTAGAAGGACTTGAGGATAGACAATTGTCTGGCTTTAT
CAGTCAGTTCACAAAACTTGGAGCAAAGATTTTACAAATTGATAAAGAGT
ATGCAGAGGCAAATGATGAGTGCCCGGTGTATGAAGATCCTTTCCCTGAC
AGTGAAGATCAGACCCTATTGCATATCTTGGCTTCTAAAAACCTTATTGA
TCTATGCGAGATCTATGTAAGAGATTACTACCCTGATCATCTGTACGCAC
CAACTGATCCTCAAATGCAAGAAATTTCTGTTGAAGATGGTAACAGAAAA
AATGCTTATAAGGGTCCCAAAGTTCCCTTTGAGCTTGCGTATGAGAAGCA
CCACGATAAAACAGCAGCATTCCTAGCTGGAGAAATGAAGCCGTTTAGGC
TCCGGCAATTATTTGAACGACGAGACGATGGAGTTCTTCAATGTAGCTTT
GCAGAGGTTATTAATAATGATATGCAGTTAACAGCTATTAAAGTACTTGA
TAGTTGTATGAACCCTGATTGGCCTTACGTACCGGTCAACCCTCTTGAAG
AAGATGATGAAACTCTGTGTAAATTGAAGGATGACCCTACTTCATATCAT
TTCTATTATCACATACTGGATAGTGACCAAAGTGGTCGAGCACCTAAGAA
GCCAGTTGAAAGCGAGGCTGAAAAAGATAGGTTCAACCACATTGAATCGT
CTCCATTCCAACTCTTGGTTACAAATAAAGTCACCAAACAGGCGGCTATT
TCTCACCCCACTGTTCGTGGTTTAGTGAATAGAAAATGGGAGCACTTTGG
AGAGACTCGAGTCAAAGTGTTTCTAGGCTTTTATATACTCTTTCTGCTGA
TGTTGGCGCTTGGACTTTTCTTCAGTGAAGATTGGGGATCTAATGTTGAC
ATTGTCATCAAATTGATCGTTGTCATCTTCAATATTGTTTACACCTTTGA
AGAAATCGACCAAATGACAAAAGAAGGCCGTGATTATCTTGCCTGGACCA
ATCTATTTGATTTACTTGGTATCCTAACAATTTATGCGTTGATTCCTCTG
TACGCGTTTGGTGAATACAAGATATATTATGGAGTTGCATCGGCTGCTTT
TATCCTCAACTTCTTTCGCGTGCTGAAATTCTTCGCAACTTTTGAAGTTG
GAAATTATGCAAGAGTGTTTATGTTTCTGTTGAAAGAAGACGTTTGGGTT
TTCCTTCAATTCTTTGCAGTCCTCATGGTTGCATTCACTGGAGCTGTTTT
CTTGGCTTTGAAATCCGAAATGTCCAATGGCGGAAAAATAATCGATGGGC
AAAATGAAACGTTGACAATTTGGTCAACCATGTTAAGAGAAGCACGTGCT
CTGGCTGAAGGAAAAGAGTTTGCTGATGACTATGATGGTGTCTATACGGC
TCCACTTATCATTTTTCTCTTACTCAACATGGCGGCCATTATTGTGGTTC
TGAGTAACATTTTGATCGGTCAAATCAGTGCACGTTATGAAGACGCTGCA
AAAGATGCCAAAGTCCAAAGTGACATTGCTAAAGCAAAAGTCATTTGTAA
AATTGAGAAAAGTCGATTCGTTTGGAGGAATTTACGAATCAAATATTACA
CACCAGGCGACTATGTAACAGATGAGGGTCTCGTTAAAGGTATACTTTAT
CGGCTCACTTGTGATCAAGAAGtacacgtttttgttttttttaagaaaca
cacttttaagaaacatgaggctcagaatgcctaaaaactaagaaacatct
aagaaacatgctgaagctgagaatgagaaaataacattttttaattcgtt
ttttttaagaaccttccaatccagcctttcataaggctgattatgtcaaa
aagtttagaaacatgtaagaaacatttaaggctcaaaaggccgatttctt
aagaaacattgaggctgc
Run BLAST on NCBI

transcript from alignment at sc0000011:169602..181372+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001574 ID=TCONS_00001574|Name=TCONS_00001574|organism=Clytia hemisphaerica|type=transcript|length=11771bp|location=Sequence derived from alignment at sc0000011:169602..181372+ (Clytia hemisphaerica)
ataattttgcTTTGTGTGTCGTTGGAATAGAACTTTTAATGTGGCTTTCT TTTTGTCAATACAGTCAATATGTGTTTTTTAAGCTCATATAGATAGCATA GCTAAAGAGAAATTGACTTATTAATGATATCGTTATGTTTTGTCAAGTCA TAAACTTTGAGAGGAAATTCGtgttgttttgaatatttttaactgGAAGG AGTGGCTCGAGTAGTAGTTCAGTAGTGATTTCCATTCAGTTTTTGGTGAT ATTTGACTGCAGGAATTAAAACAAGTATGGATTTTGTTGTTGCTTTTGTT TACTATTGtgttttcaaaacaagaaattacttgaatttattgaattttgt gGGGGAAATTATAAACCGTTTATACTTTTATTCAAATTACAGACCAAATT TTGTTATGCTTGTAATATATAACAGTTCCCTTACATAGCTCCTCGAGGAT GGGTGGATTGTAAACATGAGGGCGGAATTAAATCACCATTTTCTGAGGAG AGCATTCCGCCAATTCTCCATAAATAATTTTAAGATGATAAAAAGTATTT GGCTATTTTAGAAATCCCTTTAATTTCAAAaggtcaattttcaattatat tggattttgaaatttaactgattttttaaattctatttcAGTCAATTCCA TCAGTCGATAGCTCATTATGGCTCAGACAGTAAAGACAGCAAAGACTTTT ATAGTCCATATCGATGGCACATTAAATACTCAAATTTCttcattcaaaac aaagtttcttGCACCTCTCGTCTTTGCAAAACCAATCGAAAccatcaatc aaatcaaaatgaaagaAGAGGATTTGCAGACCAAATTAGAAGAAAAATTG ACAGAATTTCACGCGGTCTTCATTGTGACATCTGAAAATTTCGCTAAatt tttcaacgatgaaatgaATAAGGGGAAAACACACGAGGGAATATTACCGT CACCTTTGTACGAGAATTCAGAGGTCACTTATGACACATTCAAAACATTC TTTGATTCAGAAGTTCAAAAGGAAAAACCTAAACTATTTTTGGTATACAC TCTTGATGACAATGGAGATAAACTTGATGCACATTTACCTAAATGCCTCG ATGGTTTAAAGGCGAAAGGTAATGTTATTGAGGTATCGttgaagaagaaa gataaaacaACCAAAAAACTGATCGGTTATGATAAAGTATGCGGACATGT GCGTGCTTTTCTACCTTAAGCTCGATAAGAAGTCCTGCCGAATCAAGGAG TGATAATTTTCAGATAATTTATGatgataaaaaaacataaaaaattcaaa cattaCTACGCGCAGAGTACAACTACGATTCGTTTCGCATAACAATCGAC ATTGTagtttttcaattataatttgcTTGTTTTCCATAATAAAAAAGTAC ATGCAAGATATAACAAAGTTAATGAACATTATTCACTAAATTATTACGAG CTTTTTGCGGCTCTTTTATGTGCTAACATAGATTTACTTTTTCATTCAGT TACTGTAAAATTTACCATAATGAACAGCATGTAAATAAAGTcttaaaaaa caagaaaaaataattttcttccaTGCCATTTCTTCAGAGAGTGAGATGAG GAACCAATGCGATTACGGAGAAATTTTGAGTCTTCATATTTAAAATTCGG TGGGTCTTCAAATTATTACATTTTGATGTCCGGATAGAAATTCCGGAAAA ATGGGTGAAAGATaccaaaaaagtaaacaaaccagAGAATggcttatttt tgaaaattataaatcAGTCTTTTGGATTTGAAATACATTTTTGAATTGTG GAAAAAGAGATGTATGATAGTACTAAAGATAGTATACCACTGATGGAGCA GAAAAACCAATCAGTTGTTGACATTTCTTCACACAGTGACTTCATAAAAA ATCCCTTTCGCCATGATGACTCCAACTACGATTTTTGGGAAAAGGTAACa cattttttagttttcttttttactaTAGCTTAGCAATATCAGTTTGAATT CTGTTATTAAAATATAATCGAAAGTGATTGAAATAATCGAACAACCACTT ATTATATAtgaatctcttttatcaccagtAGAATggtatataaacaaaaa tatgtacaggttaaaaagaagaaaataatcaacataaaagggcttgcgga acgagcgttctgttttcgcaaagcgaagaaatctaTCTCAAAATGTACTA CTCCATTATTAATTAATgcagaattacaaaaaaaagaaaaactaatagGA CCTTACAATTCACGTTGAATGTATTGCCAGTGAGAATGTTTAAGAAATTA GAAATGTATGAAGACAGAGGTGTTCCAAAAGCACCTGGGGGTATTTGAAA AGTCATTTTGTGATACTTTTATAacagctttaaaaaattttgctgatcaa aattacaaaaatatctgCTCAATACAACTTTCCACAGGGTAcagtaaaat aacaaaagataatatcaaaaataaaaaataaaactctaaaaatttgcATC ATAGCTCATATTGAGAGTATTCTATACATGGCTtttgaactaaaaataat ttgatgtgtCTTAAAAAAAGCATCATGTAGtctttcttttgattgttttg ccTTTGTAGTTTTTGAATATTCAAGGTGAAATCGTGATCAagaaaataga gcttttgataAGTAGGATGTCCTAACTAatcaaaaaaacaaatcttGCAA TGACTTTTACCCATCTCTTGTGTATATAAACCTCTTGGAACATTATTAGA TTGTAGTAAGACAGCAATCATTGCATTCAAACATTCACAATTTATCCCTT TCTTGTGTTGTATTATATCGAAATTGTATATATTGGACGAGGATTGAGAA AAAATACCATTATATGCTacaaatttccaacatgtttcgaCCAGAGCAGT TTTCAAGGTATCGAATTGTATTTTATCGAATCTGGATGATGGGAATCGTG TAATgtttgcttgatctcaaaccacaacaaagtccttataattttataat gatTAAAAACTCCTGAAAATATTGTGTCTCCTCGCCTCAACGAATATTAC TGACCACAATCACCCAATATTCAATGTTCTTTTGTAAAAGCGTTACTCAA ATTGTTAAACAACGGCAAcgtgacaaaaaaatcattgtttggcAACAATG CCCGCTGAATGTAAAATTTAACGATGACATTTCNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATGCATCCAGtag cttaaaaaatcagcaggattctgccttgacaaaaatcgccatctttgttt atgtttcgcaagtgtgcaaaagtgaaagtagcaaTGACACAAAAACAgac atctcgcacttgattggatagtcaaactcgatataattttagTACTACTT TTACTTCTTTCAAAAGTATgtttattaaaaacaaaaaactacaaaatcag aaccaaagttttacttaatttaattttcaataaaattacgAGGTAAGTGA TTCTTTTTGCTGGCTAGACAGGTGCCATTTTTCAATACAGAGCAAAGTCG ACATTTTTCGTTGGAGGTAGCAGTTTTGGGGACATTTTTTTGAACatata tacaaatttacgccccgcgtacgcagatcttgccaaaggatgctacactc cctattcgggcgcttcgcgccctcaaaacggtcgttccgcaaaaacAAGA CTACGTTAAATATAATACATGAACAGTCAACATGCGAGAACAGGGACGGA TTTGAACAGGATAAAAGAAAGAAGTAAAGAGACAGAGGTCAGATCCCTGT TCTCGCTCTGATGACGTGTTCTTCTAACATTGCTTTGAAAGCAACCCGAT TATCATAAACATGCCAGTTTTGAATATAATCATTGTACTTAATCAAAGAT ATCTGAGGGCAGttgatcaaaacattgaataatACGGTGTCTTTTGCCGA GTAGTGTTTCTGTGAAGGATATGTTGTTAAGATCGATTATTCTTTGACAT TTGTTGAGAAAGCTGAATTCTACGTTCGTGTGAGTAGACAGTAAAAAGCA GATATAACTCTTGGTAGATTCATTAAAGCACTAACTGCCTGAGTAAGTTC AGACGACGTTCATCGATAATGCTGCATACATTGGGAATACTGTACAGTCG ATGAATGTCGTTTTTGCTTCTCTTCGATACATTGAATAGAGATTTTAAAC AAGCTGTGGTTCTTTAAGCATagatgatttttcttttattgattaacaat tgaatttcaagtaccaaaatttcaaaaaaattgtgagtattcaatCACTT TATTTTACCAACCATTCCAAGACTCGATCAACCGTTtaagtactttgatt gttattacATTAATGTGTCATTGCTTTAATGCTagaattttaaattattc aacatgattCCTTAAACTAGCAAAAGGTCTTTTTATTTCTCTGTGGAACA AAAGCAAGAAAgaggtaacctgataacagctgttcataattttcttacgc gcacagtaaacctctgaaggcgcttgaaaattgaacatctgaAGGAAAAG AGTCTTCCCTGggaaattctacaacaagaatcttttgtgcgccagaaagt caaaaactcaTATGGCGCCCTATGGTCATTAAACACGTTAATTAaatctg ctgacgtcagcaaaatatttaaatttttttcttggatCGTTTCCTTTTAT TGATTTAcacattttgtaaaatttgaagtcaaaagCTTTCTCCTACTAGA AGttattcaaattcttatttctgtgtaaaaatcataaaaattgattaaaa aattagttttttttcaaaaaattttcagcaaGTGAGACCATTTGACCATG CCTCATCTCATTTTCTATATCGAAATGCTttgaaaaacctaaaaaacatt TACGCTAAGGGGAGAAACTTAATGCAACCATTGGGGAGTGCCTTAGGTAC CCCGAGATCGCTAAGTATAATCAAGCCTATTCTAATAAAATCTTAAGTAT CCATTGATCTTCAATAGGATTTTTTACACAATTGGCTATCCATTAtgacc aatcaatcaatcaataggTTATTAAActtccaaaacttttaaaacaggct ttaaatgattttccttcaaaaatacataaaatgattttccttcaaaaata cataaaatgattttccttcaaaaatacataaaatgattttccttcaaaaa tacataaaattattttccttcaaaaatacataattagtttccttcaaaaa tacataagattatttttcttcaaaaaaatacattttccaATCAAAGATGT ATTTTCTTTTCAGTGTTTTGGAGATTTGCCTACCCTGAATCCTTAGTGTA GATCTATTTAAGCAGTCTTAGATTCCAAAGATAGTCCAATTCTTTATGTA ATTCATTTGTATTTGAAGGTGTTCTTTTAAATCCTTTCATTCTGGGTAAA CATAAAATGAATACTTTTTTTCATCAGGTTAATAACTTACACAATGAAGG AAAAACGTGGGACAATGCACTCACAACAGTGCAAGCAGAAGAGTTCAAAG AAAAATGCGATGATAAGGATCCAATTATGTGCTTACTTGAAATACATGAC AGATTCGTTAATCTAGAAGGACTTGAGGATAGACAATTGTCTGGCTTTAT CAGTCAGgtatattgttttattttaatgctttttgaaagGAGCAAACTCA TAGTAATTTTGCAAGTGTACTGAACTCCAATTATTTGtatgggaaatttt tttttgtgaaagtgACTTTTtcagctattttacaaattgatGCATTTTTC TGCTATGAAATAAGCTGACAAGGTTTTTCGTAAAAAATCCGTTTTTCTGA TTATAAAGAACAACCATAAATACGTATATAGAAATCAAAGACTTAAGTCA TTTGACactaattttttccaaaatctacATTTTTCTAGTTCACAAAACTT GGAGCAAAGATTTTACAAATTGATAAAGAGTATGCAGAGGCAAATGATGA GTGCCCGGTGTATGAAGATCCTTTCCCTGACAGTGAAGATCAGACCCTAT TGCATATCTTGGCTTCTAAAAACCTTATTGATCTATGCGAGATCTATGTA AGAGATTACTACCCTGATCATCTGTACGCACCAACTGATCCTCAAATGCA AGAAATTTCTGTTGAAGATGGTAACAGAAAAAATGCTTATAAGGGTCCCA AAGTTCCCTTTGAGCTTGCGTATGAGAAGCACCACGATAAAACAGCAGCA TTCCTAGCTGGAGAAATGAAGCCGTTTAGGTATAATGAATTTAATCTGAC TGAGAAAACAGGGCTAAGAGGATACTCGAAAAAGTGAACAACAAAATTAT AAATGATTCGCCATTAATGATACGTGTCTTATGTATAAAATCTTTTGGAC CTTGTCTCTTGTATAACTTTTTCCACCGGATTTAAAAGTATTGGGAGTGC TTGCCTTTGTATTGATACATCCTGCTATACACGATATACACGATTCCTAT AATGCTTTCATTGTCTTACTATATGTATTTTTCATGATTCAGGCTCCGGC AATTATTTGAACGACGAGACGATGGAGTTCTTCAATGTAGCTTTGCAGAG GTTATTAATAATGATATGCAGGTAAAGTTTGAAGTTGAATTGACAATCTC CCAAGGAAAATGTTGGATTTAAAGTTAACGTTTGGGTTTGTTAGTCTAGA AATTTTCCTGCATGATTTTCTTTGCATAACCTGATCAGAGTGTCCAAAGA ACTTTTATATTCATCCCCAGTCATCCCACTATGGGTAAAAAGTCAAAGTA CCCGCAAACCATTGTGCTATCTGGTgtaatcaaatttgaaaaaatagcct aaataattttttcattttctacagTTAACAGCTATTAAAGTACTTGATAG TTGTATGAACCCTGATTGGCCTTACGTACCGGTCAACCCTCTTGAAGAAG ATGATGAAACTCTGTGTAAATTGAAGGATGACCCTACTTCATATCATTTC TATTATCACATACTGGATAGTGACCAAAGTGGTAAGTGTATCTCTCGTGA TTTTAAAGCGAATTTTGTCAACAAGTCAATAGtattagtttaaaaaaaaa gaacttgTACCTAGTTTCGCCCTGGATGCATGATTTTGATACCAAAAGGC TCACTGTTCTTAATGAGCACCACACCAATCCCTGTTATACTGAACTTGTT GACCTTAGAATTCCATAAAATTATAATGTCTCAATAGATATAATACTCTT CACGTACAAATAATTATTCTTCATTGCTTTGACCTTTAAAATTTACGAAT TCACGGGAATTGGTATGGTAACAGAATACCAACAGAATCGAGTTATTTAT TGAACCTTGAAAGATCCAAgcaaaatgcaaaataatttgATCCAACGTTC CCATATTTGTTAGGTCGAGCACCTAAGAAGCCAGTTGAAAGCGAGGCTGA AAAAGATAGGTTCAACCACATTGAATCGTCTCCATTCCAACTCTTGGTTA CAAATAAAGTCACCAAACAGGTTTGATTCCTTTAGATTTATGACTCTGTA CTTGGCCTTTTTACATAccttaaaagtaaataaatttcGCTCTTCGAAAC CTTTACANCTTTTTACATAccttaaaagtaaataaatttcGCTCTTCAAA ACCTTTACATGATTTCACGATAACTACTCTGCACTAGTGTGCATCTCGTG ATTATAGCTCCTTTAGATACAGTGCTTGATGATTCAGAGAACAAATTAAC TGGTTTCCACGTTAAGtcggtaaaaaaacttttctttctaAAGATTCGAA AACGTGTAATATTTACGTACTTATTCACGTATTTTAATTTCGTTTCTTTC ACAACAGGCGGCTATTTCTCACCCCACTGTTCGTGGTTTAGTGAATAGAA AATGGGAGCACTTTGGAGAGACTCGAGTCAAGTAAGCTTATTTGCTAGTT GTCAAAAATTTAAGATGTCTGTAGATCTCAAACCTATGATACAATAGAGA TCACCATATTTATTATGGTTTTTGTATTTAGACACGTGACATGTTTATGA TTTTGATTAGCAGCGAATACAGcgaatgtttacaaatttcacTAGAACTT CAATGTCCCTCTAGTTGGACGTTACTCGTGTATCGCATTAAAGTTATTAC CTGTCAATAACAATAAGGAAATACAAGAAAATAGTTTTGAATAGTTtagt tttaatatttttaattaatttatatTAATTAATTTCTCTATTTAGAGTGT TTCTAGGCTTTTATATACTCTTTCTGCTGATGTTGGCGCTTGGACTTTTC TTCAGTGAAGATTGGGGATCTAATGTTGACATTGTCATCAAATTGATCGT TGTCATCTTCAATATTGTTTACACCTTTGAAGAAATCGACCAAATGACAA AGTAAGAACCGAACTTTGGCCAAATTCTGTTTATTTCAAGAATTTCATAG GATGAATGGctattgttttttgattttaagatCTCCACCATTTTGagctt tgtttttctttagtttCTTAAAATGAGGAAAGAGTACCAGGAATTAATCA ATTGTTGTTGAATAtctattcattctttttttttcgatttttacagAGAA GGCCGTGATTATCTTGCCTGGACCAATCTATTTGATTTACTTGGTATCCT AACAATTTATGCGTTGATTCCTCTGTACGCGTTTGGTGAATACAAGATAT ATTATGGAGTTGCATCGGCTGCTTTTATCCTCAACTTCTTTCGCGTGCTG AAATTCTTCGCAACTTTTGAGTAagtttttgaattctttttgatttttgt taatCGTAGTGTTTTTCTGAAACTTTGATTTCCGGGCCTGAACAAGATTT TCCCGAAATGAGCCCAGAACAGTTTGCCTTTGGCTTGGGGCACTTTCTTG GTGAATACGGTATTTTTTCTTCTCCTTTCGAAATAACTAATACTAATAAC AACTTTTCACTTATAGAGTTGGAAATTATGCAAGAGTGTTTATGTTTCTG TTGAAAGAAGACGTTTGGGTTTTCCTTCAATTCTTTGCAGTCCTCATGGT TGCATTCACTGGAGCTGTTTTCTTGGCTTTGAAATCCGAAATGTCCAATG GCGGAAAAATGTAAGTAATAATATAAAGATTTAATGTAAAGATTCCTCAA AGGTTTTCTACGGGAATAAGATgagcttattttaggcagtgTCTTCATGC TGAGTCAGATAAATTAAAGCTAATTTTTAACGCAACGATATTctgcaaac aagtgaaagatcgaaagttgtttcgaggtgtgacctcacattctattgtt tttgtaaacaaaaaatagcaaagtcgATTTCGAGCAAATTTAAAATCCAA ACGTTCTATTTATtctaaacataaaaacattcgaaagagtcCCTTTGTTT GAGATATGTTGTattattcaatgtattttcattttttcaaaacctttttc taatcttgtcgcacttgtttttactacatcagcatcatTAGATCTTTCAA TGAGAACAAATCCTTTTAAAGGTACTAATATTTGGAGGTTGTTTGTGTGT AAttaaatttttccaatttttggctGTTGGAAGAATACATGCTGTTATGT GGACcttatttttcatttgagaaacttaaaaaaaacttgtgaAGAAGAAT TCGCAAAAACTGCAAAATTTTCATTCTCGAAAAAGTTTTAATCGTTTATA GCATAGTTTTTATCTCTTTTTCATAGAATCGATGGGCAAAATGAAACGTT GACAATTTGGTCAACCATGTTAAGAGAAGCACGTGCTCTGGCTGAAGGAA AAGAGTTTGCTGATGACTATGATGGTGTCTATACGTAAGTTCAATTGGTA CCAGATCTCCTAATTGATCTTAATTTTAATTATCTTGTCCTATACAGTAG AGTGTCTTTAACTCACACCTCTGTTACTCTGTTACTCaaagtctccttaa ctcgaacaaatctgTTCTCCCAGtgggtgttcgagttatggagactcagc TGTATTATGTTTTAGTTTTAAATAAATTACAAGATAACTTAATGGATCTA TTTCTTTTTAGGGCTCCACTTATCATTTTTCTCTTACTCAACATGGCGGC CATTATTGTGGTTCTGAGTAACATTTTGATCGGTCAAATCAGTGCACGTT ATGAAGACGCTGCAAAAGATGCCAAAGTCCAAAGTGACATTGCTAAAGCA AAAGTCATTTGTAAAATTGAGAAAAGTCGATTCGTTTGGAGGGTAAGAGA CTTGTATATTATTAAGTTGTCTTTGATCTTCAGTCATTATCTATTttatt actttaatcgtagaaattttagcgagattaattttagcgtatattagcga gtcaggaaaatcttgatttttttggatttattttagcgaatcacgatttc aaaaaatttcgcgtggataaagtttaccgaatactcgtattacattattg actgaattcgaTTTCTAGTatatttctttgcactgaaacccttcctattg ataaaaatgtatcagcAATATaagcaatataaccagaaatttcgcgcgga taaattttagcgatctgtcgattcggcgtgttttagtgagatttatttta gcgaaaatagggaaaactctaAAATTAGtcttgctaaaatttctacgatt aaagtagtctagcatgctagacgactgcTTAACACATTgtataacaccca tattactgtattgcaaggattataaacgactccagtctactatTTTTTGA GTGATAAGAATGATATGAAGTTGAAGTCCCTCCCTTTAAGTATTGTTTGC ATTGGCTCATGCGTTTTCTCTTTGTATTTAGAATTTACGAATCAAATATT ACACACCAGGCGACTATGTAACAGATGAGGGTCTCGTTAAAGGTATACTT TATCGGCTCACTTGTGATCAAGAAGtacacgtttttgttttttttaagaa acacacttttaagaaacatgaggctcagaatgcctaaaaactaagaaaca tctaagaaacatgctgaagctgagaatgagaaaataacattttttaattc gttttttttaagaaccttccaatccagcctttcataaggctgattatgtc aaaaagtttagaaacatgtaagaaacatttaaggctcaaaaggccgattt cttaagaaacattgaggctgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000821XLOC_000821Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001574-exon-sc0000011-1491911889:169602..169875TCONS_00001574-exon-sc0000011-1491911889:169602..169875Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:169602..169875TCONS_00001574-exon-sc0000011-1510915933:169602..169875Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:169602..169875TCONS_00001574-exon-sc0000011-1575043694:169602..169875Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:170243..171545TCONS_00001574-exon-sc0000011-1491911889:170243..171545Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:170243..171545TCONS_00001574-exon-sc0000011-1510915933:170243..171545Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:170243..171545TCONS_00001574-exon-sc0000011-1575043694:170243..171545Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:175679..175858TCONS_00001574-exon-sc0000011-1491911889:175679..175858Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:175679..175858TCONS_00001574-exon-sc0000011-1510915933:175679..175858Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:175679..175858TCONS_00001574-exon-sc0000011-1575043694:175679..175858Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:176140..176480TCONS_00001574-exon-sc0000011-1491911889:176140..176480Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:176140..176480TCONS_00001574-exon-sc0000011-1510915933:176140..176480Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:176140..176480TCONS_00001574-exon-sc0000011-1575043694:176140..176480Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:176744..176822TCONS_00001574-exon-sc0000011-1491911889:176744..176822Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:176744..176822TCONS_00001574-exon-sc0000011-1510915933:176744..176822Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:176744..176822TCONS_00001574-exon-sc0000011-1575043694:176744..176822Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:177076..177232TCONS_00001574-exon-sc0000011-1491911889:177076..177232Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:177076..177232TCONS_00001574-exon-sc0000011-1510915933:177076..177232Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:177076..177232TCONS_00001574-exon-sc0000011-1575043694:177076..177232Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:177615..177721TCONS_00001574-exon-sc0000011-1491911889:177615..177721Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:177615..177721TCONS_00001574-exon-sc0000011-1510915933:177615..177721Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:177615..177721TCONS_00001574-exon-sc0000011-1575043694:177615..177721Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:178059..178132TCONS_00001574-exon-sc0000011-1491911889:178059..178132Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:178059..178132TCONS_00001574-exon-sc0000011-1510915933:178059..178132Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:178059..178132TCONS_00001574-exon-sc0000011-1575043694:178059..178132Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:178447..178602TCONS_00001574-exon-sc0000011-1491911889:178447..178602Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:178447..178602TCONS_00001574-exon-sc0000011-1510915933:178447..178602Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:178447..178602TCONS_00001574-exon-sc0000011-1575043694:178447..178602Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:178798..178971TCONS_00001574-exon-sc0000011-1491911889:178798..178971Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:178798..178971TCONS_00001574-exon-sc0000011-1510915933:178798..178971Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:178798..178971TCONS_00001574-exon-sc0000011-1575043694:178798..178971Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:179168..179311TCONS_00001574-exon-sc0000011-1491911889:179168..179311Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:179168..179311TCONS_00001574-exon-sc0000011-1510915933:179168..179311Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:179168..179311TCONS_00001574-exon-sc0000011-1575043694:179168..179311Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:179928..180035TCONS_00001574-exon-sc0000011-1491911889:179928..180035Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:179928..180035TCONS_00001574-exon-sc0000011-1510915933:179928..180035Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:179928..180035TCONS_00001574-exon-sc0000011-1575043694:179928..180035Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:180263..180443TCONS_00001574-exon-sc0000011-1491911889:180263..180443Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:180263..180443TCONS_00001574-exon-sc0000011-1510915933:180263..180443Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:180263..180443TCONS_00001574-exon-sc0000011-1575043694:180263..180443Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1491911889:181033..181372TCONS_00001574-exon-sc0000011-1491911889:181033..181372Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1510915933:181033..181372TCONS_00001574-exon-sc0000011-1510915933:181033..181372Clytia hemisphaericaexon
TCONS_00001574-exon-sc0000011-1575043694:181033..181372TCONS_00001574-exon-sc0000011-1575043694:181033..181372Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:169602..181372 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.366132 0.152161 0.309751 0.939079 9.90379 8.07329 22.2636 22.2812 18.404 13.9455 10.2572 15.0384 10.355 7.56144 5.75169 6.78046 10.329 10.9528 9.94185 11.1354 11.922 12.6713 6.3586 9.2949 6.69762 8.71232 12.8498 9.59371 0.918091 1.52577
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001574 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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