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TCONS_00001572 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001572
Unique NameTCONS_00001572
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3738

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001572 ID=TCONS_00001572|Name=TCONS_00001572|organism=Clytia hemisphaerica|type=transcript|length=3738bp
TGATCtaaacaaaaaatcaagaagAGCGTTTTTCTTGAAGAAATACATTT
CAAAAAGTCAATTCCATCAGTCGATAGCTCATTATGGCTCAGACAGTAAA
GACAGCAAAGACTTTTATAGTCCATATCGATGGCACATTAAATACTCAAA
TTTCttcattcaaaacaaagtttcttGCACCTCTCGTCTTTGCAAAACCA
ATCGAAAccatcaatcaaatcaaaatgaaagaAGAGGATTTGCAGACCAA
ATTAGAAGAAAAATTGACAGAATTTCACGCGGTCTTCATTGTGACATCTG
AAAATTTCGCTAAatttttcaacgatgaaatgaATAAGGGGAAAACACAC
GAGGGAATATTACCGTCACCTTTGTACGAGAATTCAGAGGTCACTTATGA
CACATTCAAAACATTCTTTGATTCAGAAGTTCAAAAGGAAAAACCTAAAC
TATTTTTGGTATACACTCTTGATGACAATGGAGATAAACTTGATGCACAT
TTACCTAAATGCCTCGATGGTTTAAAGGCGAAAGGTAATGTTATTGAGGT
ATCGttgaagaagaaagataaaacaACCAAAAAACTGATCGGTTATGATA
AAGTATGCGGACATGTGCGTGCTTTTCTACCTTAAGCTCGATAAGAAGTC
CTGCCGAATCAAGGAGTGATAATTTTCAGATAATTTATGatgataaaaaa
acataaaaaattcaaacattaCTACGCGCAGAGTACAACTACGATTCGTT
TCGCATAACAATCGACATTGTagtttttcaattataatttgcTTGTTTTC
CATAATAAAAAAGTACATGCAAGATATAACAAAGTTAATGAACATTATTC
ACTAAATTATTACGAGCTTTTTGCGGCTCTTTTATGTGCTAACATAGATT
TACTTTTTCATTCAGTTACTGTAAAATTTACCATAATGAACAGCATGTAA
ATAAAGTcttaaaaaacaagaaaaaataattttcttccaTGCCATTTCTT
CAGAGAGTGAGATGAGGAACCAATGCGATTACGGAGAAATTTTGAGTCTT
CATATTTAAAATTCGGTGGGTCTTCAAATTATTACATTTTGATGTCCGGA
TAGAAATTCCGGAAAAATGGGTGAAAGATaccaaaaaagtaaacaaacca
gAGAATggcttatttttgaaaattataaatcAGTCTTTTGGATTTGAAAT
ACATTTTTGAATTGTGGAAAAAGAGATGTATGATAGTACTAAAGATAGTA
TACCACTGATGGAGCAGAAAAACCAATCAGTTGTTGACATTTCTTCACAC
AGTGACTTCATAAAAAATCCCTTTCGCCATGATGACTCCAACTACGATTT
TTGGGAAAAGGTTAATAACTTACACAATGAAGGAAAAACGTGGGACAATG
CACTCACAACAGTGCAAGCAGAAGAGTTCAAAGAAAAATGCGATGATAAG
GATCCAATTATGTGCTTACTTGAAATACATGACAGATTCGTTAATCTAGA
AGGACTTGAGGATAGACAATTGTCTGGCTTTATCAGTCAGTTCACAAAAC
TTGGAGCAAAGATTTTACAAATTGATAAAGAGTATGCAGAGGCAAATGAT
GAGTGCCCGGTGTATGAAGATCCTTTCCCTGACAGTGAAGATCAGACCCT
ATTGCATATCTTGGCTTCTAAAAACCTTATTGATCTATGCGAGATCTATG
TAAGAGATTACTACCCTGATCATCTGTACGCACCAACTGATCCTCAAATG
CAAGAAATTTCTGTTGAAGATGGTAACAGAAAAAATGCTTATAAGGGTCC
CAAAGTTCCCTTTGAGCTTGCGTATGAGAAGCACCACGATAAAACAGCAG
CATTCCTAGCTGGAGAAATGAAGCCGTTTAGGCTCCGGCAATTATTTGAA
CGACGAGACGATGGAGTTCTTCAATGTAGCTTTGCAGAGGTTATTAATAA
TGATATGCAGTTAACAGCTATTAAAGTACTTGATAGTTGTATGAACCCTG
ATTGGCCTTACGTACCGGTCAACCCTCTTGAAGAAGATGATGAAACTCTG
TGTAAATTGAAGGATGACCCTACTTCATATCATTTCTATTATCACATACT
GGATAGTGACCAAAGTGGTCGAGCACCTAAGAAGCCAGTTGAAAGCGAGG
CTGAAAAAGATAGGTTCAACCACATTGAATCGTCTCCATTCCAACTCTTG
GTTACAAATAAAGTCACCAAACAGGTTTGATTCCTTTAGATTTATGACTC
TGTACTTGGCCTTTTTACATAccttaaaagtaaataaatttcGCTCTTCG
AAACCTTTACANCTTTTTACATAccttaaaagtaaataaatttcGCTCTT
CAAAACCTTTACATGATTTCACGATAACTACTCTGCACTAGTGTGCATCT
CGTGATTATAGCTCCTTTAGATACAGTGCTTGATGATTCAGAGAACAAAT
TAACTGGTTTCCACGTTAAGtcggtaaaaaaacttttctttctaAAGATT
CGAAAACGTGTAATATTTACGTACTTATTCACGTATTTTAATTTCGTTTC
TTTCACAACAGGCGGCTATTTCTCACCCCACTGTTCGTGGTTTAGTGAAT
AGAAAATGGGAGCACTTTGGAGAGACTCGAGTCAAAGTGTTTCTAGGCTT
TTATATACTCTTTCTGCTGATGTTGGCGCTTGGACTTTTCTTCAGTGAAG
ATTGGGGATCTAATGTTGACATTGTCATCAAATTGATCGTTGTCATCTTC
AATATTGTTTACACCTTTGAAGAAATCGACCAAATGACAAAAGAAGGCCG
TGATTATCTTGCCTGGACCAATCTATTTGATTTACTTGGTATCCTAACAA
TTTATGCGTTGATTCCTCTGTACGCGTTTGGTGAATACAAGATATATTAT
GGAGTTGCATCGGCTGCTTTTATCCTCAACTTCTTTCGCGTGCTGAAATT
CTTCGCAACTTTTGAAGTTGGAAATTATGCAAGAGTGTTTATGTTTCTGT
TGAAAGAAGACGTTTGGGTTTTCCTTCAATTCTTTGCAGTCCTCATGGTT
GCATTCACTGGAGCTGTTTTCTTGGCTTTGAAATCCGAAATGTCCAATGG
CGGAAAAATAATCGATGGGCAAAATGAAACGTTGACAATTTGGTCAACCA
TGTTAAGAGAAGCACGTGCTCTGGCTGAAGGAAAAGAGTTTGCTGATGAC
TATGATGGTGTCTATACGGCTCCACTTATCATTTTTCTCTTACTCAACAT
GGCGGCCATTATTGTGGTTCTGAGTAACATTTTGATCGGTCAAATCAGTG
CACGTTATGAAGACGCTGCAAAAGATGCCAAAGTCCAAAGTGACATTGCT
AAAGCAAAAGTCATTTGTAAAATTGAGAAAAGTCGATTCGTTTGGAGGAA
TTTACGAATCAAATATTACACACCAGGCGACTATGTAACAGATGAGGGTC
TCGTTAAAGGTATACTTTATCGGCTCACTTGTGATCAAGAAGtacacgtt
tttgttttttttaagaaacacacttttaagaaacatgaggctcagaatgc
ctaaaaactaagaaacatctaagaaacatgctgaagctgagaatgagaaa
ataacattttttaattcgttttttttaagaaccttccaatccagcctttc
ataaggctgattatgtcaaaaagtttagaaacatgtaagaaacatttaag
gctcaaaaggccgatttcttaagaaacattgaggctgc
Run BLAST on NCBI

transcript from alignment at sc0000011:164970..181372+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001572 ID=TCONS_00001572|Name=TCONS_00001572|organism=Clytia hemisphaerica|type=transcript|length=16403bp|location=Sequence derived from alignment at sc0000011:164970..181372+ (Clytia hemisphaerica)
TGATCtaaacaaaaaatcaagaagAGCGTTTTTCTTGAAGAAATACATTT CAAAAAGGTAAACTCCGTTAGTTATCTGCTCGTTTCCGTTaatatttttt cagccagtggggataaaaataatggactgaaaCACGATAGTGATTGATAT TCCTATGTTTTTAATGGCTgaagatttaaattcttttgttttgaagtcAG ATAATTCAGTGAGGatagataaaatattttgcagcgaggattggtctatt tgattattttcagttgggACAAAAATtgtaggataattttccaccaggac gatattttggccaatttttccagtgggaaggggtcctaTTGGGTCTTTGA GAAGGGTGTGTTTTCGTGAAAAACATGTTTGCTTTTTGTAACCTTGATAA CAACCGCAACTGTATCAAGGCCTATCAACGTCTAAACTCAAAAAGTGGTA CAAAGCGATTCCATTGTTTGAAGCTCAAAATCTAGTTGTTACAGTCTAAG TTTAGGTATCAATTCAGTATtgccaaattttatttcttatGCTTTCTTTA CCTTCTAGAGAAtaggctgttccattaaatttccatacagtggggtggac gaaccttttcaaggcaaaaaaagaTCCTTAGAAATGTGTGGAAAACCTCT GGAATATGgtaaaatttgtaaaagaaAAGCCCTTGGGAAAATGCTTCTCA TACTTTGAAAAGTGGGGCGTgtggtatttcggaattgcggaaattgGGAA AAATCCCTTCGGTATTTAGGAAATCGCGTActccgtacgcccccccccat tgaaagtgagggtggacgaactaaattCGGTGTTTTACCCCCTGCAATTT CAGAATAGCTTTTTACAccctagaaaatgaaaaacaactcCTTTATACAC TTTGGAAATTCTTCTCCtttataccccctggaaatgttcgtccaccccct gtatggatataaaatggaacggCTCAATTGTTAAGCCTACCGCTAAATTT GATTAAGATTAAGAGCTTTGTTCAAAAAGTATTACCCATCTAGTGTGGTA ACGTTTTTCGAATTACCCTTAAATTTTTACCCCTTCGAGGTATTGTTATA CATCCCACCCCATTGGGAAAACCACTATTAAACTAAGAGAATCATCACTT GAATTATGAGATTTCGTGACACTCACTTATGAAAGCCAAATCCCGGTTTT CCCCACAGCTCTCGTTCTTTTTCTCCTAAATTCCCACCAGGCCACTAAGG TAAAGGGTTCCTCCATTACTTCTCATACTATaatatcccggggggggggg gggggggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccttagtgagac ttttttgtaattttttctctcaaaatcaaaatttttttctaaaaatcgtg atttttcccacccttagagagactactttgaaatttcctgatttttgtaa cccttagagagactttgaaaggtgaaaaccccgacccttaccgtccgcac atacccagcacctatttttgcctaagtacctccCCCGGGTACCTCCGGGT CCCTCATCAATTTCAATCCAATTTACCTTTGCATACTAATTAATCTCCCC TTACTCCCTTCACAGTTTTTCCTGTGTCAACAACATCAAAATACTTTGTC AGATATCTTTGCTGTGTAAGAATACCCTACGAAATAGGATACTTCTTTAC TAACTTACTACCAAGTGTGATAGCTTTATACCCAGTCCAAGAGTTTGAAT GAAAAGTATTTTGACATTATAGGTATAAAAAACTAGTTAAAATTTATAAC TAATGCTTCACGAAATCAGTTTGATCTACACACCATTTCCTTTAATCTGT TGCCTGGATACGATATGCATTGGTCATCGCTCATACTTTTTCCCATAGCA GTGCAAAGGTGTGATGAAACCACTGGCTCATTTTAAGTACTCAATTGAGC TAAGAATTAGAAATGTATTTTTACAACTTAAAAACTAACTTTTTAGCGAA GAAATTCATTATATATTGTGGAAACCCAGAAGGTCCAATCCTTTGCTTTT CTTACCCTGTTTCATGGGATGGTTTTCATGATCGAGCTTGAGTAAATACT CGCCAAAGAGCcaaagaaagtttcagctaCATAACTAAATCCGATTTATA AAGATCTTCACTTTCTCCTTAATTTTTAGAGCGTTCAGAAACTTGGTTCG TTTGGAATGATATAATAATTTGATACATCTAGACTAGAGATAAAGCAATT CTAATTCATTAACACATATTATTGTTAATCGAGAGCTGGATACTATTATA CTTCTTCTTACAATCTTGTaaactagccataattttcattaaagtgccac cgcagaagaacgatcaaataagttgttgaattttgaaagaaatgttactg atagcctttacttctgttagaatggcatctcatctgaagcaaaatttagt ctacaaatattagcaagTTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNgaagctatgaatgccatcctcggaagctt taggcttcctgcggtggcaaatATAACACACCTCCTTGGATACGGAATCC GTTAAACATTAGCgacgaaaaaacaatttttcccGCGCGGGCGTTCGAAA AGCAGCCTTAGAAAGATAAGGGGGCGGGGACATTGATTTCGGAAGATAAA TACTACGGAATCACCCGTCTTTAGATAAAGAGtattaatttacagaccag aaattTTCTCGCGCGCGCGGCAAGCAGCCCATCGAGCGAACTGTGCAGAA AATGCGTAAATCGTGGAATAAAAAATAAGCAATCGACTTCAACCTTTTTT CCACTACATATTTCATCCACGGACGGCTGTATTTGGAGAGATTATATAAA AAACAACACATGTCATTTGAAATAGCCATGTTTTTGAGATATGAAACCTT TAACAATGAGGGGGATTCAGTGCAAAATCCTTAATAGAGATCGTTGATGG GTTTTGAAGAACCCTAAAAAATCTGAGACAAATTATCTTAAGAAGGATTC ATCGTATTAAAGTCACTTCAATGCGCATCTGAGAGCTTAAAGTCGAAATC GCTCGCTCGCGCGCAGACATCACAACGCTAAGCGGGCGCTTTATAAACCA CTTGTCATCACTAGATAGATTTGATATTAAACGGTGACGTCAATGTACCA CACGGAAAGAGGGCCCTGGGACCTAGTTTCAAACAATGTAGAGGGAGAGT TAGAGGCCTCGGACCTAGGTTGGCTGCAATTACAATCCGCTCAAAAGCTT TCAAGAATACTGGATTGTTTTGTTGAATAACTTATAAACAATCCTTTTAT TGAATATCGATTTTGTCTTTCcaattttgataataattttgcTTTGTGTG TCGTTGGAATAGAACTTTTAATGTGGCTTTCTTTTTGTCAATACAGTCAA TATGTGTTTTTTAAGCTCATATAGATAGCATAGCTAAAGAGAAATTGACT TATTAATGATATCGTTATGTTTTGTCAAGTCATAAACTTTGAGAGGAAAT TCGtgttgttttgaatatttttaactgGAAGGAGTGGCTCGAGTAGTAGT TCAGTAGTGATTTCCATTCAGTTTTTGGTGATATTTGACTGCAGGAATTA AAACAAGTATGGATTTTGTTGTTGCTTTTGTTTACTATTGtgttttcaaa acaagaaattacttgaatttattgaattttgtgGGGGAAATTATAAACCG TTTATACTTTTATTCAAATTACAGACCAAATTTTGTTATGCTTGTAATAT ATAACAGTTCCCTTACATAGCTCCTCGAGGATGGGTGGATTGTAAACATG AGGGCGGAATTAAATCACCATTTTCTGAGGAGAGCATTCCGCCAATTCTC CATAAATAATTTTAAGATGATAAAAAGTATTTGGCTATTTTAGAAATCCC TTTAATTTCAAAaggtcaattttcaattatattggattttgaaatttaac tgattttttaaattctatttcAGTCAATTCCATCAGTCGATAGCTCATTA TGGCTCAGACAGTAAAGACAGCAAAGACTTTTATAGTCCATATCGATGGC ACATTAAATACTCAAATTTCttcattcaaaacaaagtttcttGCACCTCT CGTCTTTGCAAAACCAATCGAAAccatcaatcaaatcaaaatgaaagaAG AGGATTTGCAGACCAAATTAGAAGAAAAATTGACAGAATTTCACGCGGTC TTCATTGTGACATCTGAAAATTTCGCTAAatttttcaacgatgaaatgaA TAAGGGGAAAACACACGAGGGAATATTACCGTCACCTTTGTACGAGAATT CAGAGGTCACTTATGACACATTCAAAACATTCTTTGATTCAGAAGTTCAA AAGGAAAAACCTAAACTATTTTTGGTATACACTCTTGATGACAATGGAGA TAAACTTGATGCACATTTACCTAAATGCCTCGATGGTTTAAAGGCGAAAG GTAATGTTATTGAGGTATCGttgaagaagaaagataaaacaACCAAAAAA CTGATCGGTTATGATAAAGTATGCGGACATGTGCGTGCTTTTCTACCTTA AGCTCGATAAGAAGTCCTGCCGAATCAAGGAGTGATAATTTTCAGATAAT TTATGatgataaaaaaacataaaaaattcaaacattaCTACGCGCAGAGT ACAACTACGATTCGTTTCGCATAACAATCGACATTGTagtttttcaatta taatttgcTTGTTTTCCATAATAAAAAAGTACATGCAAGATATAACAAAG TTAATGAACATTATTCACTAAATTATTACGAGCTTTTTGCGGCTCTTTTA TGTGCTAACATAGATTTACTTTTTCATTCAGTTACTGTAAAATTTACCAT AATGAACAGCATGTAAATAAAGTcttaaaaaacaagaaaaaataattttc ttccaTGCCATTTCTTCAGAGAGTGAGATGAGGAACCAATGCGATTACGG AGAAATTTTGAGTCTTCATATTTAAAATTCGGTGGGTCTTCAAATTATTA CATTTTGATGTCCGGATAGAAATTCCGGAAAAATGGGTGAAAGATaccaa aaaagtaaacaaaccagAGAATggcttatttttgaaaattataaatcAGT CTTTTGGATTTGAAATACATTTTTGAATTGTGGAAAAAGAGATGTATGAT AGTACTAAAGATAGTATACCACTGATGGAGCAGAAAAACCAATCAGTTGT TGACATTTCTTCACACAGTGACTTCATAAAAAATCCCTTTCGCCATGATG ACTCCAACTACGATTTTTGGGAAAAGGTAACacattttttagttttcttt tttactaTAGCTTAGCAATATCAGTTTGAATTCTGTTATTAAAATATAAT CGAAAGTGATTGAAATAATCGAACAACCACTTATTATATAtgaatctctt ttatcaccagtAGAATggtatataaacaaaaatatgtacaggttaaaaag aagaaaataatcaacataaaagggcttgcggaacgagcgttctgttttcg caaagcgaagaaatctaTCTCAAAATGTACTACTCCATTATTAATTAATg cagaattacaaaaaaaagaaaaactaatagGACCTTACAATTCACGTTGA ATGTATTGCCAGTGAGAATGTTTAAGAAATTAGAAATGTATGAAGACAGA GGTGTTCCAAAAGCACCTGGGGGTATTTGAAAAGTCATTTTGTGATACTT TTATAacagctttaaaaaattttgctgatcaaaattacaaaaatatctgC TCAATACAACTTTCCACAGGGTAcagtaaaataacaaaagataatatcaa aaataaaaaataaaactctaaaaatttgcATCATAGCTCATATTGAGAGT ATTCTATACATGGCTtttgaactaaaaataatttgatgtgtCTTAAAAAA AGCATCATGTAGtctttcttttgattgttttgccTTTGTAGTTTTTGAAT ATTCAAGGTGAAATCGTGATCAagaaaatagagcttttgataAGTAGGAT GTCCTAACTAatcaaaaaaacaaatcttGCAATGACTTTTACCCATCTCT TGTGTATATAAACCTCTTGGAACATTATTAGATTGTAGTAAGACAGCAAT CATTGCATTCAAACATTCACAATTTATCCCTTTCTTGTGTTGTATTATAT CGAAATTGTATATATTGGACGAGGATTGAGAAAAAATACCATTATATGCT acaaatttccaacatgtttcgaCCAGAGCAGTTTTCAAGGTATCGAATTG TATTTTATCGAATCTGGATGATGGGAATCGTGTAATgtttgcttgatctc aaaccacaacaaagtccttataattttataatgatTAAAAACTCCTGAAA ATATTGTGTCTCCTCGCCTCAACGAATATTACTGACCACAATCACCCAAT ATTCAATGTTCTTTTGTAAAAGCGTTACTCAAATTGTTAAACAACGGCAA cgtgacaaaaaaatcattgtttggcAACAATGCCCGCTGAATGTAAAATT TAACGATGACATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNAGGATGCATCCAGtagcttaaaaaatcagcagga ttctgccttgacaaaaatcgccatctttgtttatgtttcgcaagtgtgca aaagtgaaagtagcaaTGACACAAAAACAgacatctcgcacttgattgga tagtcaaactcgatataattttagTACTACTTTTACTTCTTTCAAAAGTA Tgtttattaaaaacaaaaaactacaaaatcagaaccaaagttttacttaa tttaattttcaataaaattacgAGGTAAGTGATTCTTTTTGCTGGCTAGA CAGGTGCCATTTTTCAATACAGAGCAAAGTCGACATTTTTCGTTGGAGGT AGCAGTTTTGGGGACATTTTTTTGAACatatatacaaatttacgccccgc gtacgcagatcttgccaaaggatgctacactccctattcgggcgcttcgc gccctcaaaacggtcgttccgcaaaaacAAGACTACGTTAAATATAATAC ATGAACAGTCAACATGCGAGAACAGGGACGGATTTGAACAGGATAAAAGA AAGAAGTAAAGAGACAGAGGTCAGATCCCTGTTCTCGCTCTGATGACGTG TTCTTCTAACATTGCTTTGAAAGCAACCCGATTATCATAAACATGCCAGT TTTGAATATAATCATTGTACTTAATCAAAGATATCTGAGGGCAGttgatc aaaacattgaataatACGGTGTCTTTTGCCGAGTAGTGTTTCTGTGAAGG ATATGTTGTTAAGATCGATTATTCTTTGACATTTGTTGAGAAAGCTGAAT TCTACGTTCGTGTGAGTAGACAGTAAAAAGCAGATATAACTCTTGGTAGA TTCATTAAAGCACTAACTGCCTGAGTAAGTTCAGACGACGTTCATCGATA ATGCTGCATACATTGGGAATACTGTACAGTCGATGAATGTCGTTTTTGCT TCTCTTCGATACATTGAATAGAGATTTTAAACAAGCTGTGGTTCTTTAAG CATagatgatttttcttttattgattaacaattgaatttcaagtaccaaa atttcaaaaaaattgtgagtattcaatCACTTTATTTTACCAACCATTCC AAGACTCGATCAACCGTTtaagtactttgattgttattacATTAATGTGT CATTGCTTTAATGCTagaattttaaattattcaacatgattCCTTAAACT AGCAAAAGGTCTTTTTATTTCTCTGTGGAACAAAAGCAAGAAAgaggtaa cctgataacagctgttcataattttcttacgcgcacagtaaacctctgaa ggcgcttgaaaattgaacatctgaAGGAAAAGAGTCTTCCCTGggaaatt ctacaacaagaatcttttgtgcgccagaaagtcaaaaactcaTATGGCGC CCTATGGTCATTAAACACGTTAATTAaatctgctgacgtcagcaaaatat ttaaatttttttcttggatCGTTTCCTTTTATTGATTTAcacattttgta aaatttgaagtcaaaagCTTTCTCCTACTAGAAGttattcaaattcttat ttctgtgtaaaaatcataaaaattgattaaaaaattagttttttttcaaa aaattttcagcaaGTGAGACCATTTGACCATGCCTCATCTCATTTTCTAT ATCGAAATGCTttgaaaaacctaaaaaacattTACGCTAAGGGGAGAAAC TTAATGCAACCATTGGGGAGTGCCTTAGGTACCCCGAGATCGCTAAGTAT AATCAAGCCTATTCTAATAAAATCTTAAGTATCCATTGATCTTCAATAGG ATTTTTTACACAATTGGCTATCCATTAtgaccaatcaatcaatcaatagg TTATTAAActtccaaaacttttaaaacaggctttaaatgattttccttca aaaatacataaaatgattttccttcaaaaatacataaaatgattttcctt caaaaatacataaaatgattttccttcaaaaatacataaaattattttcc ttcaaaaatacataattagtttccttcaaaaatacataagattatttttc ttcaaaaaaatacattttccaATCAAAGATGTATTTTCTTTTCAGTGTTT TGGAGATTTGCCTACCCTGAATCCTTAGTGTAGATCTATTTAAGCAGTCT TAGATTCCAAAGATAGTCCAATTCTTTATGTAATTCATTTGTATTTGAAG GTGTTCTTTTAAATCCTTTCATTCTGGGTAAACATAAAATGAATACTTTT TTTCATCAGGTTAATAACTTACACAATGAAGGAAAAACGTGGGACAATGC ACTCACAACAGTGCAAGCAGAAGAGTTCAAAGAAAAATGCGATGATAAGG ATCCAATTATGTGCTTACTTGAAATACATGACAGATTCGTTAATCTAGAA GGACTTGAGGATAGACAATTGTCTGGCTTTATCAGTCAGgtatattgttt tattttaatgctttttgaaagGAGCAAACTCATAGTAATTTTGCAAGTGT ACTGAACTCCAATTATTTGtatgggaaatttttttttgtgaaagtgACTT TTtcagctattttacaaattgatGCATTTTTCTGCTATGAAATAAGCTGA CAAGGTTTTTCGTAAAAAATCCGTTTTTCTGATTATAAAGAACAACCATA AATACGTATATAGAAATCAAAGACTTAAGTCATTTGACactaattttttc caaaatctacATTTTTCTAGTTCACAAAACTTGGAGCAAAGATTTTACAA ATTGATAAAGAGTATGCAGAGGCAAATGATGAGTGCCCGGTGTATGAAGA TCCTTTCCCTGACAGTGAAGATCAGACCCTATTGCATATCTTGGCTTCTA AAAACCTTATTGATCTATGCGAGATCTATGTAAGAGATTACTACCCTGAT CATCTGTACGCACCAACTGATCCTCAAATGCAAGAAATTTCTGTTGAAGA TGGTAACAGAAAAAATGCTTATAAGGGTCCCAAAGTTCCCTTTGAGCTTG CGTATGAGAAGCACCACGATAAAACAGCAGCATTCCTAGCTGGAGAAATG AAGCCGTTTAGGTATAATGAATTTAATCTGACTGAGAAAACAGGGCTAAG AGGATACTCGAAAAAGTGAACAACAAAATTATAAATGATTCGCCATTAAT GATACGTGTCTTATGTATAAAATCTTTTGGACCTTGTCTCTTGTATAACT TTTTCCACCGGATTTAAAAGTATTGGGAGTGCTTGCCTTTGTATTGATAC ATCCTGCTATACACGATATACACGATTCCTATAATGCTTTCATTGTCTTA CTATATGTATTTTTCATGATTCAGGCTCCGGCAATTATTTGAACGACGAG ACGATGGAGTTCTTCAATGTAGCTTTGCAGAGGTTATTAATAATGATATG CAGGTAAAGTTTGAAGTTGAATTGACAATCTCCCAAGGAAAATGTTGGAT TTAAAGTTAACGTTTGGGTTTGTTAGTCTAGAAATTTTCCTGCATGATTT TCTTTGCATAACCTGATCAGAGTGTCCAAAGAACTTTTATATTCATCCCC AGTCATCCCACTATGGGTAAAAAGTCAAAGTACCCGCAAACCATTGTGCT ATCTGGTgtaatcaaatttgaaaaaatagcctaaataattttttcatttt ctacagTTAACAGCTATTAAAGTACTTGATAGTTGTATGAACCCTGATTG GCCTTACGTACCGGTCAACCCTCTTGAAGAAGATGATGAAACTCTGTGTA AATTGAAGGATGACCCTACTTCATATCATTTCTATTATCACATACTGGAT AGTGACCAAAGTGGTAAGTGTATCTCTCGTGATTTTAAAGCGAATTTTGT CAACAAGTCAATAGtattagtttaaaaaaaaagaacttgTACCTAGTTTC GCCCTGGATGCATGATTTTGATACCAAAAGGCTCACTGTTCTTAATGAGC ACCACACCAATCCCTGTTATACTGAACTTGTTGACCTTAGAATTCCATAA AATTATAATGTCTCAATAGATATAATACTCTTCACGTACAAATAATTATT CTTCATTGCTTTGACCTTTAAAATTTACGAATTCACGGGAATTGGTATGG TAACAGAATACCAACAGAATCGAGTTATTTATTGAACCTTGAAAGATCCA AgcaaaatgcaaaataatttgATCCAACGTTCCCATATTTGTTAGGTCGA GCACCTAAGAAGCCAGTTGAAAGCGAGGCTGAAAAAGATAGGTTCAACCA CATTGAATCGTCTCCATTCCAACTCTTGGTTACAAATAAAGTCACCAAAC AGGTTTGATTCCTTTAGATTTATGACTCTGTACTTGGCCTTTTTACATAc cttaaaagtaaataaatttcGCTCTTCGAAACCTTTACANCTTTTTACAT AccttaaaagtaaataaatttcGCTCTTCAAAACCTTTACATGATTTCAC GATAACTACTCTGCACTAGTGTGCATCTCGTGATTATAGCTCCTTTAGAT ACAGTGCTTGATGATTCAGAGAACAAATTAACTGGTTTCCACGTTAAGtc ggtaaaaaaacttttctttctaAAGATTCGAAAACGTGTAATATTTACGT ACTTATTCACGTATTTTAATTTCGTTTCTTTCACAACAGGCGGCTATTTC TCACCCCACTGTTCGTGGTTTAGTGAATAGAAAATGGGAGCACTTTGGAG AGACTCGAGTCAAGTAAGCTTATTTGCTAGTTGTCAAAAATTTAAGATGT CTGTAGATCTCAAACCTATGATACAATAGAGATCACCATATTTATTATGG TTTTTGTATTTAGACACGTGACATGTTTATGATTTTGATTAGCAGCGAAT ACAGcgaatgtttacaaatttcacTAGAACTTCAATGTCCCTCTAGTTGG ACGTTACTCGTGTATCGCATTAAAGTTATTACCTGTCAATAACAATAAGG AAATACAAGAAAATAGTTTTGAATAGTTtagttttaatatttttaattaa tttatatTAATTAATTTCTCTATTTAGAGTGTTTCTAGGCTTTTATATAC TCTTTCTGCTGATGTTGGCGCTTGGACTTTTCTTCAGTGAAGATTGGGGA TCTAATGTTGACATTGTCATCAAATTGATCGTTGTCATCTTCAATATTGT TTACACCTTTGAAGAAATCGACCAAATGACAAAGTAAGAACCGAACTTTG GCCAAATTCTGTTTATTTCAAGAATTTCATAGGATGAATGGctattgttt tttgattttaagatCTCCACCATTTTGagctttgtttttctttagtttCT TAAAATGAGGAAAGAGTACCAGGAATTAATCAATTGTTGTTGAATAtcta ttcattctttttttttcgatttttacagAGAAGGCCGTGATTATCTTGCC TGGACCAATCTATTTGATTTACTTGGTATCCTAACAATTTATGCGTTGAT TCCTCTGTACGCGTTTGGTGAATACAAGATATATTATGGAGTTGCATCGG CTGCTTTTATCCTCAACTTCTTTCGCGTGCTGAAATTCTTCGCAACTTTT GAGTAagtttttgaattctttttgatttttgttaatCGTAGTGTTTTTCT GAAACTTTGATTTCCGGGCCTGAACAAGATTTTCCCGAAATGAGCCCAGA ACAGTTTGCCTTTGGCTTGGGGCACTTTCTTGGTGAATACGGTATTTTTT CTTCTCCTTTCGAAATAACTAATACTAATAACAACTTTTCACTTATAGAG TTGGAAATTATGCAAGAGTGTTTATGTTTCTGTTGAAAGAAGACGTTTGG GTTTTCCTTCAATTCTTTGCAGTCCTCATGGTTGCATTCACTGGAGCTGT TTTCTTGGCTTTGAAATCCGAAATGTCCAATGGCGGAAAAATGTAAGTAA TAATATAAAGATTTAATGTAAAGATTCCTCAAAGGTTTTCTACGGGAATA AGATgagcttattttaggcagtgTCTTCATGCTGAGTCAGATAAATTAAA GCTAATTTTTAACGCAACGATATTctgcaaacaagtgaaagatcgaaagt tgtttcgaggtgtgacctcacattctattgtttttgtaaacaaaaaatag caaagtcgATTTCGAGCAAATTTAAAATCCAAACGTTCTATTTATtctaa acataaaaacattcgaaagagtcCCTTTGTTTGAGATATGTTGTattatt caatgtattttcattttttcaaaacctttttctaatcttgtcgcacttgt ttttactacatcagcatcatTAGATCTTTCAATGAGAACAAATCCTTTTA AAGGTACTAATATTTGGAGGTTGTTTGTGTGTAAttaaatttttccaatt tttggctGTTGGAAGAATACATGCTGTTATGTGGACcttatttttcattt gagaaacttaaaaaaaacttgtgaAGAAGAATTCGCAAAAACTGCAAAAT TTTCATTCTCGAAAAAGTTTTAATCGTTTATAGCATAGTTTTTATCTCTT TTTCATAGAATCGATGGGCAAAATGAAACGTTGACAATTTGGTCAACCAT GTTAAGAGAAGCACGTGCTCTGGCTGAAGGAAAAGAGTTTGCTGATGACT ATGATGGTGTCTATACGTAAGTTCAATTGGTACCAGATCTCCTAATTGAT CTTAATTTTAATTATCTTGTCCTATACAGTAGAGTGTCTTTAACTCACAC CTCTGTTACTCTGTTACTCaaagtctccttaactcgaacaaatctgTTCT CCCAGtgggtgttcgagttatggagactcagcTGTATTATGTTTTAGTTT TAAATAAATTACAAGATAACTTAATGGATCTATTTCTTTTTAGGGCTCCA CTTATCATTTTTCTCTTACTCAACATGGCGGCCATTATTGTGGTTCTGAG TAACATTTTGATCGGTCAAATCAGTGCACGTTATGAAGACGCTGCAAAAG ATGCCAAAGTCCAAAGTGACATTGCTAAAGCAAAAGTCATTTGTAAAATT GAGAAAAGTCGATTCGTTTGGAGGGTAAGAGACTTGTATATTATTAAGTT GTCTTTGATCTTCAGTCATTATCTATTttattactttaatcgtagaaatt ttagcgagattaattttagcgtatattagcgagtcaggaaaatcttgatt tttttggatttattttagcgaatcacgatttcaaaaaatttcgcgtggat aaagtttaccgaatactcgtattacattattgactgaattcgaTTTCTAG TatatttctttgcactgaaacccttcctattgataaaaatgtatcagcAA TATaagcaatataaccagaaatttcgcgcggataaattttagcgatctgt cgattcggcgtgttttagtgagatttattttagcgaaaatagggaaaact ctaAAATTAGtcttgctaaaatttctacgattaaagtagtctagcatgct agacgactgcTTAACACATTgtataacacccatattactgtattgcaagg attataaacgactccagtctactatTTTTTGAGTGATAAGAATGATATGA AGTTGAAGTCCCTCCCTTTAAGTATTGTTTGCATTGGCTCATGCGTTTTC TCTTTGTATTTAGAATTTACGAATCAAATATTACACACCAGGCGACTATG TAACAGATGAGGGTCTCGTTAAAGGTATACTTTATCGGCTCACTTGTGAT CAAGAAGtacacgtttttgttttttttaagaaacacacttttaagaaaca tgaggctcagaatgcctaaaaactaagaaacatctaagaaacatgctgaa gctgagaatgagaaaataacattttttaattcgttttttttaagaacctt ccaatccagcctttcataaggctgattatgtcaaaaagtttagaaacatg taagaaacatttaaggctcaaaaggccgatttcttaagaaacattgaggc tgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000821XLOC_000821Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001572-exon-sc0000011-1491911889:164970..165026TCONS_00001572-exon-sc0000011-1491911889:164970..165026Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:164970..165026TCONS_00001572-exon-sc0000011-1510915933:164970..165026Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:164970..165026TCONS_00001572-exon-sc0000011-1575043694:164970..165026Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:170243..171545TCONS_00001572-exon-sc0000011-1491911889:170243..171545Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:170243..171545TCONS_00001572-exon-sc0000011-1510915933:170243..171545Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:170243..171545TCONS_00001572-exon-sc0000011-1575043694:170243..171545Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:175679..175858TCONS_00001572-exon-sc0000011-1491911889:175679..175858Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:175679..175858TCONS_00001572-exon-sc0000011-1510915933:175679..175858Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:175679..175858TCONS_00001572-exon-sc0000011-1575043694:175679..175858Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:176140..176480TCONS_00001572-exon-sc0000011-1491911889:176140..176480Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:176140..176480TCONS_00001572-exon-sc0000011-1510915933:176140..176480Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:176140..176480TCONS_00001572-exon-sc0000011-1575043694:176140..176480Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:176744..176822TCONS_00001572-exon-sc0000011-1491911889:176744..176822Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:176744..176822TCONS_00001572-exon-sc0000011-1510915933:176744..176822Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:176744..176822TCONS_00001572-exon-sc0000011-1575043694:176744..176822Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:177076..177232TCONS_00001572-exon-sc0000011-1491911889:177076..177232Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:177076..177232TCONS_00001572-exon-sc0000011-1510915933:177076..177232Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:177076..177232TCONS_00001572-exon-sc0000011-1575043694:177076..177232Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:177615..178132TCONS_00001572-exon-sc0000011-1491911889:177615..178132Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:177615..178132TCONS_00001572-exon-sc0000011-1510915933:177615..178132Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:177615..178132TCONS_00001572-exon-sc0000011-1575043694:177615..178132Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:178447..178602TCONS_00001572-exon-sc0000011-1491911889:178447..178602Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:178447..178602TCONS_00001572-exon-sc0000011-1510915933:178447..178602Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:178447..178602TCONS_00001572-exon-sc0000011-1575043694:178447..178602Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:178798..178971TCONS_00001572-exon-sc0000011-1491911889:178798..178971Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:178798..178971TCONS_00001572-exon-sc0000011-1510915933:178798..178971Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:178798..178971TCONS_00001572-exon-sc0000011-1575043694:178798..178971Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:179168..179311TCONS_00001572-exon-sc0000011-1491911889:179168..179311Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:179168..179311TCONS_00001572-exon-sc0000011-1510915933:179168..179311Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:179168..179311TCONS_00001572-exon-sc0000011-1575043694:179168..179311Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:179928..180035TCONS_00001572-exon-sc0000011-1491911889:179928..180035Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:179928..180035TCONS_00001572-exon-sc0000011-1510915933:179928..180035Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:179928..180035TCONS_00001572-exon-sc0000011-1575043694:179928..180035Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:180263..180443TCONS_00001572-exon-sc0000011-1491911889:180263..180443Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:180263..180443TCONS_00001572-exon-sc0000011-1510915933:180263..180443Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:180263..180443TCONS_00001572-exon-sc0000011-1575043694:180263..180443Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1491911889:181033..181372TCONS_00001572-exon-sc0000011-1491911889:181033..181372Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1510915933:181033..181372TCONS_00001572-exon-sc0000011-1510915933:181033..181372Clytia hemisphaericaexon
TCONS_00001572-exon-sc0000011-1575043694:181033..181372TCONS_00001572-exon-sc0000011-1575043694:181033..181372Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:164970..181372 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0906401 0 0 0 0 0 0 0.19458 0.0943091 0.149848 0.377035 0 0.0290386 0 0.0290835 0 0 0 0 0.245387 0.547185 0 0 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001572 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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