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TCONS_00001569 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001569
Unique NameTCONS_00001569
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3418

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001569 ID=TCONS_00001569|Name=TCONS_00001569|organism=Clytia hemisphaerica|type=transcript|length=3418bp
TTTTATTCTAGTTTTGATGAGAAAACCTCTGTCAGcatgtttgtttttaa
atgacCCCCTGAAAATTACTGTATTCGAAATAGAGCTTCGTACTGAGACC
TTTTTGCTAAAATtcaatgaattttctttcttcGCTTCATGGAGACTGGG
TCCGAGACGGTCAATAACAAGACCTTCTTTTGCTGATTCtgcaaaataat
tttagatgtAAACAAGAGCCGGAGAAGatcgtttgaaaaaaatttgctgg
taggaaaatttatatattttattttaaattgcctAATTGATGTAAACAGC
TCGTAAAGAAGATGTCAATTTTGCAAAGAGATGAAGAACTGATAATCTTT
TTCTAATGGAGCGTATTGCTTTTTGTGAAGACTCCATTTTTTGCAGCAAT
GGCACAGGTTTCCTGTTCAAATGGTTTTTCTTCAACAGAGGAAACTTCCA
AGATGGCTGCCGACCAAGCCTTGCTAAAAAACTCAAATGCTAATATCTTT
GGAGATATTGAATCCATGAGATGTGAAAAAtgcaaaagcaaaaagaaaaa
ggtgACCGTTGTCTGTATTGACTGTGGAGAACTTGCTTTATGCAATGATT
GTAACCGCAAAGTACATGAAAATAATAAAGTTCAACATCAGCTGCATGAA
TTGAGACCAAAAACACAGACTCTAGCCAAAGAAAAGCAAATTAATGGAAC
ATTGAATGGATCAATTAATGGAACAATTCATCACAAGAAGAACAATAGTA
TTGCAAAGCTTGACATAGTGCACAATGACAAACCAAAAAGTTTATTATTG
ATTGACAGTACAGAAAGATTGCAGGTAACAAAAGAGGGTGATTTCAAGCA
TTTACTTGGTTGTGATGATGATCCTCGAGTGAAAGTTGTTTCAATCTTTG
GAAACACAGGAGATGGAAAATCACATACTCTGAATCATACATTTTTTGAC
GGCGCTGAAGTATTTGATACATCACCATCCCAAAAATCATGTACCGTTGG
TGTATGGGTTTCCTACTGCCCGAACCAGAAAGCCATCATCGTGGATACAG
AAGGTCTGCTTGGtgtttcagaaaatgcaaataagAGGATGAGATTGTTG
ATGAAGATTCTTGCTGTCTCGGATGTTGTGATTTATCGTACAAGAGCAGA
ACGCCTACATTCTGATATGTTTACTTTCTTGGGTGATGCTTCAGAAGCCT
ACatcaaatatttcacaaaagaTCTTCAATCAGTTCAACAAAGAGGCCAT
ATGGAGAATGTTCCCTTGTGTAGCTTAGGTCCCTCTATTGTTATCTTTCA
AGAGACACATTACACTACACCACTTGGTTTTGAAAATGATCCATCAGAAC
ATGATAACAGTCCAGAAGAGATTTTGAGatccaattttttcaacattggA
CGCAATCCAGCTGCATTTAGTTCCATCAATTATGTTGGTACAAGAACGAC
TACCCAATCCACTGATTTCTCTATCCTCTTGAATGAAGTGAAGAAAAACC
TCAAGAACAAGACCGTTCGTTCTGCAAGACCTGTTTCTGTCATTTTCAAT
GCTTTGATgTTTTTGAATGACAAATTCGGTGATGATATCAATGACATCCT
ACCAAACAGTTTCCCTGATGAATATTTTACATGTGTTTCAAAATGTTTAT
CATGCAGTGCTCGATGTGGAAAAAACATGAATCAtgagaaagaagagaaa
gaacatCGCTCAGAACAAAAGTGTACATATCAAGCACAATTTGACAACAA
AGTATATACGTGCAAGGCATGCCATGAGAAAGGCGTTGAATCACTTGTGA
TACCCAAAACTGCTGAAACTCAAGATTCTCCCTTGGTTGGTCTTGCAAAA
TATGCTTGGTCAGGATATGTTCTTGAATGTCCAAAATGTGGTGTTATTTA
CCGAAGTCGACAATTTTGGTATGGCAATGGTGAAGTAGAGAATTTTGTGC
GCATTGAAATCAAACATGTCTGGCCAGGGACACGACTTCCAAACACTAGT
CAAAATTCAGCACGACGCATTTTGGATGGTATGATGAACTTGGCAGATGC
AATCACCAATGTTAGTGCAAAACCTACTAAAGCTGTCACCAGTTGGGTTA
CTGATAAAGTTGCTCCAACCTACTGGACACCTAACTATCTCATTATTGAC
TGTGCAAAATGTGGCCATGATTTTGAAGAGACAGAGAAGAAACATCATTG
TCGAGCCTGTGGTCGAGGTTATTGTGACTCGTGTACACAACATAGGATTC
CTGTACCGGACAGAGGCTGGGGAGACACGCCCGTTCGTGTTTGTGATGAT
TGCTTCACTAAATCCGGACAAGTCGATCAATCGAGTGTGCAGAAGAATTC
GATCGATATCAGTGAGTTGTTGGAAGCGATTGATGATGACCCTGAAATCG
ATACAGGTGAAATGGTAGCCATCAAAACCGCCAAAAACATACCCACCCGC
CACCCGCCTGAAGTTCTCACAACACGGAAAGTAACCGAGCAAGTCCAGTC
CACACTTTCATTCCTATCAAGCTCTTTAGAATATCCCTTGGAGTATTTAG
TGGATTCGGCCAGACCTGATTATTGGGTTCCAGATTCCAAGATTTTGAAT
TGCCACTCATGCGAAATGGAATTCTCAAAAAAAGATTCTAAGCATCATTG
TCGCAAGTGTGGAAAGGGCTTTTGTGATCCATGCTCAAAGTCTAGAGTGC
CGGTACCGAGTCGTGGTTGGGATTATCCAGTTCGTGTTTGTAACGGATGT
TCGTTGAAGAAAGGTCCTTTGTAATGATTGAGGGTATGATGTCATCATTT
ATAATGATCTGTTGATGGTTGGCTTTATTTGGCTttattatgttttgatt
taactttctGCTTAAAAAAAGATATCTACAACCTATGCTGTTGTTTTCCA
TATAACTTTATCGTGATGCTCTTGAATGTAAAGTATCCACACATACTTGA
agcttttttgaatttattcaaAGCTGTGTGAAGAGCATCTCGCTACTTTT
CTTCATGTCTTTTTTGTATCTCTAAACTTGTAACTAGAACTGTATGAATT
GTCATCCCAAAGTTGTTCGTTGTCCCCTAGGACCAGTTATGAATCCTAGT
GGGACACTTCTTTGGAAATGATGAAGTAGACTTAGCTTTTATATCCTAAA
TCATAATCATAATTTTTATCGCTGTACTGTActttactttcgtttttaac
ccTAGTTTCTAAGGGTGCTTGTTCCTTATGTTGAGTTAAGTAGTTAGAGA
ATtgtgttgttttttaattttttacatCACTTTGTGGCTACTGAAAGGTC
CCGTCGAGTTTCTTCAAGTTTTAACCAAATGGGGCCAGATCAAGGATCAC
AGacgggtcaaattaaattctcttTACCTTATAATTACGAAGCGTTTCAG
TTTCATTTTTGAGATGAC
Run BLAST on NCBI

transcript from alignment at sc0000011:141230..153715+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001569 ID=TCONS_00001569|Name=TCONS_00001569|organism=Clytia hemisphaerica|type=transcript|length=12486bp|location=Sequence derived from alignment at sc0000011:141230..153715+ (Clytia hemisphaerica)
TTTTATTCTAGTTTTGATGAGAAAACCTCTGTCAGcatgtttgtttttaa atgacCCCCTGAAAATTACTGTATTCGAAATAGAGCTTCGTACTGAGACC TTTTTGCTAAAATtcaatgaattttctttcttcGCTTCATGGAGACTGGG TCCGAGACGGTCAATAACAAGACCTTCTTTTGCTGATTCtgcaaaataat tttagatgtAAACAAGAGCCGGAGAAGatcgtttgaaaaaaatttgctgg taggaaaatttatatattttattttaaattgcctAATTGATGTAAACAGC TCGTAAAGAAGATGTCAATTTTGCAAAGAGATGAAGAACTGATAATCTTT TTCTAATGGAGCGTATTGCTTTTTGTGAAGACTCCATTTTTTGCAGCAAT GGCACAGGTTTCCTGTTCAAATGGTTTTTCTTCAACAGAGGAAACTTCCA AGATGGCTGCCGACCAAGCCTTGCTAAAAAACTCAAATGCTAATATCTTT GGAGATATTGAATCCATGAGATGTGAAAAAtgcaaaagcaaaaagaaaaa ggtgACCGTTGTCTGTATTGACTGTGGAGAACTTGCTTTATGCAATGATT GTAACCGCAAAGTACATGAAAATAATAAAGTTCAACATCAGCTGCATGAA TTGAGACCAAAAACACAGACTCTAGCCAAAGAAAAGCAAATTAATGGAAC ATTGAATGGATCAATTAATGGAACAATTCATCACAAGAAGAACAATAGTA TTGCAAAGCTTGACATAGTGCACAATGACAAACCAAAAAGTTTATTATTG ATTGACAGTACAGAAAGATTGCAGGTATGTAtatttttttcacaaagtca AAAACTTCCAAATCATGAGGCAAGAGTAATCAATGAACGGGTTTACCATT GCTTTggataaaatattttatgtatatAATGATTTAAAGTTCATCAGTCA TAATCCATCATTTTCCAATACACAACCTTGTACACACAAGAAGATAAGCA GTCCAGCTTTCTACTTTCTGTGTGATTttgagcttgattttttgtcaaaa aattcatATGGAACAAAGGAAAATAGTCAAAGATcgacagtcaggcacat cctggcaaatgaacggggtgagcatagaccttttttcaaagaggatgtcc tgttgaataattatgtagtccagccataaaaacaatgatagagccatgca taattacagTATCATGCATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNaaaagcgtgaaaatgaataaaaatgaacttcaaac tgaaaaagggaaaaaaggaagaaaactgggaactttattttttcattaaa agtttcttcaatcttcaatcaagacaaaattgacccatggaaaaaaaatt tcatctatgcagttctttgaaatgaagcaaaatatttccaaccctgttca attaaactgggtattcggcgctattacgtcactttcgttttcgaccccat tcatttgccaatggtcgcaagtgaaaaatacgccgttcatttgccaggat gtgcctgactgatcAAAGAAATTTACCTTTACTTTCAATTGCAATTGCAT TAATAGAAAGTACAGGGGCTTTCAAAGCTTTATGAAATAGGGACTTCCAC AAGCTGCTAGAAAAAAGCCTTCAGATTGAAGACGAAAAAAATTTGCATTG TCATGATGGAGCACATGAAAAAATGAGCACATGAATAAAACCTGAGTAAG CTGTTAAATAAATATCACTCTAACTACTTTGCAGACCAGACAGTTGCTAT gacggaattagacaaggtacTGTGAGTTGGTCTAATCAgcgaggctggaa cttcgatttttaaggattacgattttaccagctttttagcgaatTTTGCC TTGCTAATCCAAATTTTGCTAATCTAAAGTTTTTCAGTGTTCcgaaaaaa cgcatagcagaaattatttcatcttcacaggatcgattctcagcATTAAA ATACATCTTATGATTAGCTCGCgttctcgcgcgggcgaataaagatgagg cgacAATCTTGCACTAAGGgtgctaccgtcaactgctctaacttgggact atctgacaaaacatgggacggcaattcggccaccatttcaccgaatgtcc aaagtcatttggtttgagttaaggaacagtatttaaaaatacaggatttc tctttcaattttacagtaagtgaaaatacagaccagatatgcaacagtcc catgttgcgaccaatcgtcccaagttagagcagttgacggtacttaGTTT CTGCCCTATTTTGCGCCAACAATAGAATGGTTCAAATACAGGgatattcc aaatgataaatgaTGTtgttttgtaagtgtttattttctgagagatacaa ataatatattgaatattattaacttatttattcaagtatttttgagcgca aatttaaattttaaatttaaatttgatgtCAGATTTTTTCTGTGCTGCCA CGATcctgaaaatgcaaaaatatggcagaaatcaacgaaaattctaacaa tgaaattcaacaaaattatgGATATTGCACACCCAATAACTGTTTAACAA ACACCATCATAGCAGATAACGACACCTTACAATGTAGGAGATGTGATAGA CTTGTCCATTATGCTTGCTCTGAGCTCCCGGCCTATATGATTCAGCTTTG TCTGCAATATAAAAGCTGGCGCTTCGAATGTGGAAATTGTGTTACAATAA CGCCACTCTTACTTGAGAGGATTAAAACAAGCAGACAAAAAGCTCGCAGT AACATCACAACGAAAGAAGTAGATAAAGATGAACATCATAGATTGAAATT AGGTTTCAACGAGAGAATAACCTTTCTAGAAAGGAAAGTCGAGAAgctaa tgaataaaaaagacGTCAACAAAGAGAGGAACAACAAACGATCTGAAACA CAGCTCGACAacacagaaacaaaaaaacaatcatatgcagaagtcaccaa agaagatctacaaaaacaagaggtgaccataaaaagtttcatcaaatcAG TGAACCAAGAGGAGCGTTGACTCAAATCAACCAAGTGCAACATCATAGTG CATGATTTAGGtgaaaacaaacacaaaaacaaagaaGAGCAACAAGTTGG TGACAAAGATTTTATAGAAAGAATACTGAAACAACAAATGGGTTTCGACG TGATGATAATCAAGGTAGAACGCATAGGTGCTGGCAAAGATGAATTGTAT ACAAATGAACGATGGAGACCATTAAAAGTTACTCTCGGGAGTGAAGAAGA AAGGATTAGAATACTTGCATCAGCCCACAAACTAGATAAAGATGATTTCA GAGTAtcagacgatttttcaaggaaagaatgggagataataaaacaatgg catcataaagcaaaagaaaaaacatcgaaagaaaaagacaagagtcatat atggaaagtgagaggtagtcctaggactaaactctatttaaagaaattta cgacgGAAACAACATGATTGTAAGAAGAGTGGGTTAGAGGCCAGAATTGA CAGATgaatggaatgataagatctataaattgtaaagatgtaagattgtt tcatagaggtcaatagacctgagaaatacacttctataaataaaaaaata aataccgtaaatcctcgaataagcgccccgcttgaataagtgccccgctc gaataagcgcctcCCTTTTAGTTGAAATAATATTATAAGCGCCctgcttg aataagcgcccccctttgAATAAGCACCCCCTCCAGGGAGAAGTTTTTAT TTATGGGTAAGGTTGGTACTACTTTCAGATGTGTGTGGAGAGGTGCACGT ACACGTGTGCATTGCACACCTCAAATGATTCAGTCTTAAGAAGTCTGAAA ATTGGACAAGAAATAGATACCTAGATGATTCAATTGAAGGGAAACAACAA TGAAATAAACCAAATCAAGTCCAGCCTTATAATATTTGACTATTAAATTA AACCCAAGCTGCTCTCAGATTTTTTCTCCAANTCTGATTGACAACAATAG AATGATTAGTATTATAGAATCTTTTTATAtgtgttttcaaagtttttaca aCTTGGAGCTTTGGTTCTTCTATACTCTTCATTTTTCCCATAGGATCATA GACCACATAGATAAATCAGTAATTGTTTCAGACAGTTTGAGATTTTCAAA GTATTTCTGcaaatttcaacaaaaggatgggatcaaaaaattttttgctt cATAAGGCATTACCTTTTAAAAAACTGTGTAATCTGGTGTAATCGAggtt ttattatttatttggatttcaGGTAGAACAATAATTTTGTACATTTCTAG GTAACAAAAGAGGGTGATTTCAAGCATTTACTTGGTTGTGATGATGATCC TCGAGTGAAAGTTGTTTCAATCTTTGGAAACACAGGAGATGGAAAATCAC ATACTCTGAATCATACATTTTTTGACGGCGCTGAAGTATTTGATACATCA CCATCCCAAAAATCATGTACCGTTGGTGTATGGGTTTCCTACTGCCCGAA CCAGAAAGCCATCATCGTGGATACAGAAGGTCTGCTTGGtgtttcagaaa atgcaaataagAGGATGAGATTGTTGATGAAGATTCTTGCTGTCTCGGAT GTTGTGATTTATCGTACAAGAGCAGAACGCCTACATTCTGATATGTTTAC TTTCTTGGGTGATGCTTCAGAAGCCTACatcaaatatttcacaaaagaTC TTCAATCAGTTCAACAAAGAGGCCATATGGAGAATGTTCCCTTGTGTAGC TTAGGTCCCTCTATTGTTATCTTTCAAGAGACACATTACACTACACCACT TGGTTTTGAAAATGATCCATCAGAACAGTAAGTAAATTATGACAGAAGGT CAATTTGTACTCTCTGGAAAGACTTCTTGAATTAATTCTctccaaaaact tttaaaacttggCACTCttttttgtaaacgaaaaagaGGGGTTGATAACA AAGCTACACAGCTTTTCACCTTGAGTTTACACAAAAGTAACATAGATTTC TCTGAATAATCTTTTTGGTATATTCGTTCAATTGAGCACCAATTGATGCT GAATAATCCAAATACATCGATTTGACAATCTTAGAATacttcaaatttgt ttttattttcactttacAGTGATAACAGTCCAGAAGAGATTTTGAGatcc aattttttcaacattggACGCAATCCAGCTGCATNTAaataccgtaaatc ctcgaataagcgccccgcttgaataagtgccccgctcgaataagcgcctc CCTTTTAGTTGAAATAATATTATAAGCGCCctgcttgaataagcgccccc ctttgAATAAGCACCCCCTCCAGGGAGAAGTTTTTATTTATGGGTAAGGT TGGTACTACTTTCAGATGTGTGTGGAGAGGTGCACGTACACGTGTGCATT GCACACCTCAAATGATTCAGTCTTAAGAAGTCTGAAAATTGGACAAGAAA TAGATACCTAGATGATTCAATTGAAGGGAAACAACAATGAAATAAACCAA ATCAAGTCCAGCCTTATAATATTTGACTATTAAATTAAACCCAAGCTGCT CTcagattttttctccaattcaaGAATTGAATTTACATAATATTCCTAAG TGAAAGACTTGGAATGTCTCTTGAAAGGTACTTTCAGATAAGTATCCTTG GTAGATTTTTTTAATCGATTAAATGTGATAAACCTTCTTGGAAAATACTA GAATTTTAAGCTAAATTTGATTGGGTAATTTTGATTTGGAAATACAAGGA ATTTTAAGGCAATTTTGCTTTAGAAAAATAAGAGGTAATTGTCCTGAGGA AGTACAATAAGTGAtgtatgtaatttttctttgagataCAAGGAAGTGTT TATTAATGGATCGTTTAGTAAATCCAATTTCGAATTTGACAGATAGTCTG GCCGGAATACAATAAAATAGGGGTGAACGTAGAAAAAAATTCCGCGTAGA CtttcttggtaccgttggaagcgaaattttatgtagattatcaTACTCAA AGCCTCNGTGATGATGATCCTCGAGTGAAAGTTGTTTCAATCTTTGGAAA CACAGGAGATGGAAAATCACATACTCTGAATCATACATTTTTTGACGGCG CTGAAGTATTTGATACATCACCATCCCAAAAATCATGTACCGTTGGTGTA TGGGTTTCCTACTGCCCGAACCAGAAAGCCATCATCGTGGATACAGAAGG TCTGCTTGGtgtttcagaaaatgcaaataagAGGATGAGATTGTTGATGA AGATTCTTGCTGTCTCAGATGTTGTGATTTATCGTACAAGAGCAGAACGC CTACATTCTGATATGTTTACTTTCTTGGGTGATGCTTCAGAAGCCTACat caaatatttcacaaaagaTCTTCAATCAGTTCAACAAAGAGGCCATATGG AGAATGTTCCCTTGTGTAGCTTAGGTCCCTCTATTGTTATCTTTCAAGAG ACACATTACACTACACCACTTGGTTTTGAAAATGATCCATCAGAACAGTA AGTAAATTATGACAGAAGGTCAATTTGTACTCTCTGGAAAGACTTCTTGA ATTAATTCTctccaaaaacttttaaaacttggCACNCTCTGGAAAGACTT CTTGAATTATTTCTctccaaaaacttttaaaacttggCACTCttttttgt aaacgaaaaagaGGGGTTGATAACAAAGCTACACAGCTTTTCACCTTGAG TTTACACAAAAGTAACATAGATTTCTCTGAATAATCTTTTTGGTATATTC GTTCAATTGAGCACCAATTGATGCTGAATAATCCAAATACATCGATTTGA CAATCTTAGAATacttcaaatttgtttttattttcactttacAGTGATAA CAGTCCAGAAGAGATTTTGAGatccaattttttcaacattggACGCAATC CAGCTGCATTTAGTTCCATCAATTATGTTGGTACAAGAACGACTACCCAA TCCACTGATTTCTCTATCCTCTTGAATGAAGTGAAGAAAAACCTCAAGAA CAAGACCGTTCGTTCTGCAAGACCTGTTTCTGTCATTTTCAATGCTTTGA Tggtaaatttgattttaaagattatgttcttttttatatgatataaaagt tgttctttcttttgtttaaaaatgctgtctAAGCAATTGTTAGGAGAtac attaaattaaattttaaaataattaaaaaaataactaTTAAGAACGTTCT TAAACCTTTGGAAATTGTTATTCTTCTACAATTCTTTCTTCTTTAGTTCT ATTGCCAATAAGCTGAGTGTTTGTATTTAAGCGCACTCCTTTGAGTCTGA GATTTATATCAGTGGATCGGGCGTGCACTGACGATAACCACTCTTTACCT TTATTGTAGTTTTTGAATGACAAATTCGGTGATGATATCAATGACATCCT ACCAAACAGTTTCCCTGATGAATATTTTACATGTGTTTCAAAATGTTTAT CATGCAGGTATGTTTAATGTTCTTGGAATATCTATTCAATTTATAGAGGA TTTTAATCAGTGTTAATCCTTGTTATTCTGTTGTAATGGAATCCTTAAAA GAATTTGGAAGTAGAACTGCGCAAAATCTAGCAGAACTTGTTTATAGAAT CCTTAAAATCATTTTACTGTGGACCGAACTGACTTGATCACTGTACGGAA CCAATTCTATGTTTTTTTCGAAAGATATCAATCAACTTTCGATCCAGCTC CCAAGCAACTCTAGACATTTCCAACAGAACCTTCTCCAATACCTTCCATT CTTTCTAATAGTGCTCGATGTGGAAAAAACATGAATCAtgagaaagaaga gaaagaacatCGCTCAGAACAAAAGTGTACATATCAAGCACAATTTGACA ACAAAGTATATACGTGCAAGGTACGTCTGATTTTTATCTACTTTTATTTT GAAGTAATGTCAGTAAAAGTTTTGCCGTCTCGGTCCGCTTTTTGTCTCAG CTTTGCCAGCTAGTCTAAAAAGTTAGCAAAAAATCTATAGAATCTGTTGG AATTTGTTGTGTAAagttaatttttatttgatacgctacttttgttttca tttgttttgttAATCGCGAGTGTTGGTAGAGTCTTTTATTATAAACAAGG CAATAGTCGACCAATTTTAAACCTGTTTATTTCCTAGGCATGCCATGAGA AAGGCGTTGAATCACTTGTGATACCCAAAACTGCTGAAACTCAAGATTCT CCCTTGGTTGGTCTTGCAAAATATGCTTGGTCAGGGTATGTTCTCATTGT GTTTGTGATTTGTATTAAGAAAAGAAGTTGTATTTAGAATGCtgtgtttt gatttctttttcaatgtatttttcattaaaagttatACATAACATTGAAT TCGCACctttaaaattaagaaaattgcaGAGAAAAAGATTGCATTTTGTT AAtacttttaaattaaaatagttTTCAGAAGATACACTAAAATCGactgt ttgttttttaataCACGATACTGAATAGCATTTGGCTTCCAGAGCAGAAC AGGCTCCTTACATTGTTATTTCACAAAATAATTtcactaaaaagttcaaa agtgATTAATTCTGACGACGttttatttttggaaagtttttctttttaga ttttgtCTGGATTTCTCCTATACCTTTCAAACTGGCTGTCTGTAGATAAT CCAAGTTATATTCAAATACACGATTTTCGTATTGCCAGTTAGATGAGCTT GGACTTAAAATGGTCCGCTAAATAAAAGATTTGTAATGATTTTCGtccag aatcacaaaatatggTCCAAACAAGTTTTtctatcttttaattttttgga ggATTGTTTCTTGAATTTACATCCATAAGACTTTTTGTACAGTCGTTTGT CATGCAACGAATAATGATACAAAAATTAGTATCTTTTCTTTTCCCTAGAT ATGTTCTTGAATGTCCAAAATGTGGTGTTATTTACCGAAGTCGACAATTT TGGTATGGCAATGGTGAAGTAGAGAATTTTGTGCGCATTGAAATCAAACA TGTCTGGCCAGGGgtaagattttgatattttctgttCATCGCGTATACAA GTCTCTCATTCCAAGCTTCTTCAAATTTGTAGCCAAGAGTGTCGTGAGAA GTACATGAATGCAAAGCTCATAAAGAGAACTTTACccaaaaagctaaaac tttaCTTTAGTTTATACTGAATTGTGTCTAGAGCTTTTTAATTCTGTTNA AACTTTACTTTAGTTTATAATGAATTGTGTCTAGAGCTTTTTAAATATGT TGATGAACGATTTGCTTGAAAATAGACTCACTTCACAATCAATGCATTCC TCTACCACATTTCGaaattataagaatattaatTCGTTTGCAGACACGAC TTCCAAACACTAGTCAAAATTCAGCACGACGCATTTTGGATGGTATGATG AACTTGGCAGATGCAATCACCAATGTTAGTGCAAAACCTACTAAAGCTGT CACCAGTTGGGTTACTGATAAAGTTGCTCCAACCTACTGGACACCTAACT ATCTCATTATTGTAAGttcttttgttatattttcgaatatattgTGTCTT TGAGAGATATGTTGTTGAACGATGGAAAAAATTGTGATCCGCTCTCaatg atatttttatttgtgTCTTTGAAAGATAAACTTTTGGAATCTATAATGTA TtaaattggagaaaaatttgTCCAATGGCCCTGAATGGCCATGCTTAAGA AGATGTTGTAAAATATGAAAGATTCGAGGTTTTTTCTTTTGGACAAACTA TTCAAATTAAAAGGGCTATTCAAATATGCAATTTCTAGGTAAAAATTAGC ATGGTAAAAAGGGTGTGTCATTTGtcgattggaattttttttgtctaAAG TAATTATATGGGAAGTTCATATAATTCCACtgttttcaaagaaaagtttt gtttatttttgagtAATGAGTAACTGCGAGTTTGAAAGTCGTTTTTTCCT CCAATTAATATCAGACCTGGTGGGAGGGCAGAAGGCTGGAAGaaagaatg aagaagaagaaaacaatcCATTCATGTTTTctccttaaaatgttttttat aagaaaatcacTTTCAAGAAAGTACTTGATTAAACCTTAAACTTTGCCAG CCAATCTCTTGGATGGACAAAAAttcttcgaatttttttacaatattatg gtgaaaatatttgaaatatatCTCACTTCGATTTTTCACCCTCTCTAGGA CTGTGCAAAATGTGGCCATGATTTTGAAGAGACAGAGAAGAAACATCATT GTCGAGCCTGTGGTCGAGGTTATTGTGACTCGTGTACACAACATAGGATT CCTGTACCGGACAGAGGCTGGGGAGACACGCCCGTTCGTGTTTGTGATGA TTGCTTCACTAAATCCGGACAAGTCGATCAATCGAGTGTGCAGAAGAATT CGATCGATATCAGGTAAGAAAATTTCCAGTTTGTTAAATGTGCAAGATTT TGAGTTGCAAACATCGTTAAgaataacacccccttctcactgaCACGGTA GGATTCTTTCAGCCTggaataaaaataacggactgaaattcgatggggat taacattcccatattttttatggcttgggatttcaattcttttgttttca agtcacaaaattcagtggggatagaaagaatagtataatattttgcagtg aagattggtttatttgattattttcagtggggataaaaattggaggataa ttttcaactatggacgatatttttgccaatttttccagtgtgaaggggtc ccagtaggtctgtgagaaggggtttaAGAATAGTACACGAaggaatcttt taaaaaaatcgcaaaagctcaaagtttcaaatttaaaaactgAACCACCT TCATATTATTTGCATGCTTTCTTTTACCAAAAACGCAATGTTAAAATCGA TAATGACGACGATATAGTACCCAAAAGGCAAGGGTTAGACCTATGGTTTt cctagaaaaaaattaaagccGGTTCTCGGTATAGTCTAAATCACATCCCT TTGTAAAACCGCAGGTCTAAGGAGCtagaatccgttagtggatgctaGCA GCAGTAGAATTTTCTTGTGATATCATTGGAATATCTTTATAGATGCCTTT TTAGGAATTCtagctttacagatctgtgaatATTATCAAATCGAAAATTG ACCATCTTTTCTCTCTCCTTCCATCCATAGTGAGTTGTTGGAAGCGATTG ATGATGACCCTGAAATCGATACAGGTGAAATGGTAGCCATCAAAACCGCC AAAAACATACCCACCCGCCACCCGCCTGAAGTTCTCACAACACGGAAAGT AACCGAGCAAGTCCAGTCCACACTTTCATTCCTATCAAGCTCTTTAGAAT ATCCCTTGGAGTATTTAGTGGATTCGGCCAGACCTGATTATTGGGTTCCA GATTCCAAGATTTTGAATTGCCACTCATGCGAAATGGAATTCTCAAAAAA AGATTCTAAGCATCATTGTCGCAAGTGTGGAAAGGGCTTTTGTGATCCAT GCTCAAAGTCTAGAGTGCCGGTACCGAGTCGTGGTTGGGATTATCCAGTT CGTGTTTGTAACGGATGTTCGTTGAAGAAAGGTCCTTTGTAATGATTGAG GGTATGATGTCATCATTTATAATGATCTGTTGATGGTTGGCTTTATTTGG CTttattatgttttgatttaactttctGCTTAAAAAAAGATATCTACAAC CTATGCTGTTGTTTTCCATATAACTTTATCGTGATGCTCTTGAATGTAAA GTATCCACACATACTTGAagcttttttgaatttattcaaAGCTGTGTGAA GAGCATCTCGCTACTTTTCTTCATGTCTTTTTTGTATCTCTAAACTTGTA ACTAGAACTGTATGAATTGTCATCCCAAAGTTGTTCGTTGTCCCCTAGGA CCAGTTATGAATCCTAGTGGGACACTTCTTTGGAAATGATGAAGTAGACT TAGCTTTTATATCCTAAATCATAATCATAATTTTTATCGCTGTACTGTAc tttactttcgtttttaacccTAGTTTCTAAGGGTGCTTGTTCCTTATGTT GAGTTAAGTAGTTAGAGAATtgtgttgttttttaattttttacatCACTT TGTGGCTACTGAAAGGTCCCGTCGAGTTTCTTCAAGTTTTAACCAAATGG GGCCAGATCAAGGATCACAGacgggtcaaattaaattctcttTACCTTAT AATTACGAAGCGTTTCAGTTTCATTTTTGAGATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000820XLOC_000820Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001569-exon-sc0000011-1491911889:141230..142053TCONS_00001569-exon-sc0000011-1491911889:141230..142053Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:141230..142053TCONS_00001569-exon-sc0000011-1510915933:141230..142053Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:141230..142053TCONS_00001569-exon-sc0000011-1575043694:141230..142053Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:145780..146306TCONS_00001569-exon-sc0000011-1491911889:145780..146306Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:145780..146306TCONS_00001569-exon-sc0000011-1510915933:145780..146306Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:145780..146306TCONS_00001569-exon-sc0000011-1575043694:145780..146306Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:148324..148531TCONS_00001569-exon-sc0000011-1491911889:148324..148531Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:148324..148531TCONS_00001569-exon-sc0000011-1510915933:148324..148531Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:148324..148531TCONS_00001569-exon-sc0000011-1575043694:148324..148531Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:148839..148936TCONS_00001569-exon-sc0000011-1491911889:148839..148936Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:148839..148936TCONS_00001569-exon-sc0000011-1510915933:148839..148936Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:148839..148936TCONS_00001569-exon-sc0000011-1575043694:148839..148936Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:149241..149349TCONS_00001569-exon-sc0000011-1491911889:149241..149349Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:149241..149349TCONS_00001569-exon-sc0000011-1510915933:149241..149349Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:149241..149349TCONS_00001569-exon-sc0000011-1575043694:149241..149349Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:149617..149714TCONS_00001569-exon-sc0000011-1491911889:149617..149714Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:149617..149714TCONS_00001569-exon-sc0000011-1510915933:149617..149714Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:149617..149714TCONS_00001569-exon-sc0000011-1575043694:149617..149714Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:150378..150492TCONS_00001569-exon-sc0000011-1491911889:150378..150492Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:150378..150492TCONS_00001569-exon-sc0000011-1510915933:150378..150492Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:150378..150492TCONS_00001569-exon-sc0000011-1575043694:150378..150492Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:150823..150990TCONS_00001569-exon-sc0000011-1491911889:150823..150990Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:150823..150990TCONS_00001569-exon-sc0000011-1510915933:150823..150990Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:150823..150990TCONS_00001569-exon-sc0000011-1575043694:150823..150990Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:151678..151892TCONS_00001569-exon-sc0000011-1491911889:151678..151892Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:151678..151892TCONS_00001569-exon-sc0000011-1510915933:151678..151892Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:151678..151892TCONS_00001569-exon-sc0000011-1575043694:151678..151892Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1491911889:152660..153715TCONS_00001569-exon-sc0000011-1491911889:152660..153715Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1510915933:152660..153715TCONS_00001569-exon-sc0000011-1510915933:152660..153715Clytia hemisphaericaexon
TCONS_00001569-exon-sc0000011-1575043694:152660..153715TCONS_00001569-exon-sc0000011-1575043694:152660..153715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:141230..153715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.233406 0.227608 0.264274 1.03421 1.57381 0.497457 2.10056 0.561863 0.590061 0.487257 0.472944 1.39904 0 0.322418 0.132536 0.995618 0.876086 0.179592 0.248116 0 2.03103 1.98133 0.802861 0.973218 0.501196 4.02575 1.92028 2.04937 0.777213 1.31972
Blast
BLAST of TCONS_00001569 vs. Swiss-Prot (Human)
Match: ZFYV1 (Zinc finger FYVE domain-containing protein 1 OS=Homo sapiens GN=ZFYVE1 PE=1 SV=1)

HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0
Identity = 351/670 (52.39%), Postives = 461/670 (68.81%), Query Frame = 3
Query:  777 DKPKSLLLIDSTERLQVTKEGDFKHLLGCDDDPRVKVVSIFGNTGDGKSHTLNHTFFDGAEVFDTSPSQKSCTVGVWVSYCPNQKAIIVDTEGLLGVSENANKRMRLLMKILAVSDVVIYRTRAERLHSDMFTFLGDASEAYIKYFTKDLQSVQQRGHMENVPLCSLGPSIVIFQETHYTTPLGFENDPSEHDNSPEEILRSNFFNIGRNPAAFSSINYVGTRTTTQSTDFSIXXXXXXXXXXXXTVRSARPVSVIFNALMFLNDKFGDDI-NDILPNS--FPDEYFTCVSKCLSCSARCGKNMNXXXXXXXXRSEQKCTYQAQFDNKVYTCKACHEKGVESLVIPKTAETQDSPLVGLAKYAWSGYVLECPKCGVIYRSRQFWYGNGE-VENFVRIEIKHVWPGTR-LPNTSQNSARRILDGMMNLADAITNVSAKPTKAVTSWVTDKVAPTYWTPNYLIIDCAKCGHDFEETEKKHHCRACGRGYCDSCTQHRIPVPDRGWGDTPVRVCDDCFTKSGQVDQSSVQKNSIDISELLEAIDDDPEIDTGEMVAIKTAKNIPTRHPPEVLTTRKVTEQVQSTXXXXXXXXXXXXXXXVDSARPDYWVPDSKILNCHSCEMEFSKKDSKHHCRKCGKGFCDPCSKSRVPVPSRGWDYPVRVCNGCSLKKGPL 2771
            +K  S LL+D  E +QVT E DF   L C  D  +KVVSIFGNTGDGKSHTLNHTFF G EVF TSP+Q+SCTVGVW +Y P  K  ++DTEGLLG + N ++R RLL+K+LA+SD+VIYRT A+RLH+D+F FLGDASEAY+K+FTK+L++   R  + +VPL +LGP+++IF ET +T  LG  + PSE    PE++++  F  +GR P AFSSI+Y GTRT    TDFS L   +++ L+N T RS R   VIF AL  L+D+F  +I +D + +S  FPDEYFTC S CLSC   C K+MNH KE   H ++ +C Y  Q+DN+VYTCKAC+E+G E  V+PKT+ + DSP +GLAKYAWSGYV+ECP CGV+YRSRQ+W+GN + V+  VR EI HVWPGT      + N+A+R+LDGM  +A +++ +S  PTKAVTSW+TD++AP YW PN  I+ C KC   F++ + KHHCRACG G+CDSC+    PVP+RGWG  PVRVCD+C+           +  ++ ++     +DD    + G ++A                  RKV E VQ+TL  + ++++ PL  + D+ARP YWVPD +IL+CH+C  EFS K SKHHCR CG+GFCD CS  R  VPSRGWD+PVRVC  C+ K G L
Sbjct:  146 EKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHLKVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLLGATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTARCGL-DVPLSTLGPAVIIFHETVHTQLLG-SDHPSE---VPEKLIQDRFRKLGRFPEAFSSIHYKGTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSSFFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCY-----------EARNVQLAVTEAQVDD----EGGTLIA------------------RKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL 777          
The following BLAST results are available for this feature:
BLAST of TCONS_00001569 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFYV10.000e+052.39Zinc finger FYVE domain-containing protein 1 OS=Ho... [more]
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