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TCONS_00001568 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001568
Unique NameTCONS_00001568
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1878

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001568 ID=TCONS_00001568|Name=TCONS_00001568|organism=Clytia hemisphaerica|type=transcript|length=1878bp
AACTAAACATAAATGAAGTCTACTTACAGTTCGAGCACCTGTGATTTCTG
CTAAAGCATCCTGGATTGCACCACCGTCATTACGATTGTCTAATTCAATG
ACAACATATTTTGCTCCAACTTTATCAAGACTTCCCTTTGCCATTTTACA
GTATGGACAAtatgtctttgaaaatacaacAACTTTGTCTTTGAGAAAGT
ATCAAATGGAGTCTATTTTATCTCTCCTGCAAAATAACAAGGAACTTGAC
AATGTGGAATTAATGTCTGAGATTGCACTGTTTGCATACCTTAGTGACAA
TGCTTATGGTAAAAATGCTTTGAAACTCGTCACTGGTGCAAAAGTCATCC
AAGAATTGTATCGTCGGTTCACTAAACAAGACCAAATTATTGAAGCTCTG
AGGGCTGATGCAGTTCGAAAGATAGCATTGTATGTTGAGAAAAACCCTCG
TGCAAGTACAAATGATCAAGCTCGTGAAATTCAAAAACACGTGGATGATT
TTGCCGCTAAAGTTGCCTTAGTCAATGGTGCATAATTAATTTGTACAATA
TTTAGAATATGTAGCTATTATTTAAATCTttacgaaagcagccggcgagg
cgacctttttttccgatgtgttctgagagcatatttcagctagaaatttt
gatcttttcTGATCAgagcttcgaaaattaatcagctagaaataatgatg
tgttctgacgagacaggggtataatcaaatTCATCTAACGTgctcttgtt
gtctaggtaaccctagaaagcttcagaacacatcttttaaggagaccgag
gtataatcaagagaaaattgatgtaatctttcgtggaaaaaaacaaatat
ctttcaAGTTTATCTTGCCAACTGTTTTTCCTATATTTGAGGACACATCA
AACCATGATGTAGTGACAAGTTTAGGaagacaaatagtgcgataaggttt
cctagaaatcagaacacataatttgcataaaaatttgaaaggtcataata
tttggtctcctagaagaaaagaacacatatttctaaaaaatctctccgcc
ggctgcttctgtcTTTATATATAAATTACAATTTAAAACATTCTTTTCCA
TATATTATCATGTGCACTTTAAGATTTTATGGGGTTTTATAAGCAGGTTT
GGTTTTAAACGAGTTTGATTTTGGATAATAACCATTTTATCTTGATCGGT
AAACACAAATATTTCTTCCatcaaaatttggtttttctttAACTACACTT
TTCGACAAGTTTAGTATTCAGTTATTCTATCTTAttttcaacttcagttg
agctaaaATCCCAGAATGTATGTTTGTCcgcaaactttggggcagcgtag
AGAGCGGAATAATTGATTTACggagatgaaatttggcacgCACCTTCCTT
AGGATAAAACTtagagattttatttttttccccgaGTTATCCCCATTTAA
CTGAAATTTTGCGCTCATTTAACGTCATTAAATTGAAATAgttaacttga
aatttttttttgaattctaaaaatacaaaaaaataatcacCCTGGGGTTA
CAATCGGGTCTCTCTTATCCCGAACACCTATAACTCTGGGTAATGTCGAG
AGAGAGCTCATCACTCtgtttaaaaaaagtgtttacaattgggctTCCAC
TTTCACACgagttgagcccagtgcttcAGCACGTtatagttttcatttat
ttgtataatttgataatttttttcagataattaTTTGTATGATTATTATA
GAGGATGTATATAATAAACTCAACATGAAATTCTCGATCAAACacttttt
ttgccaattttactaaaatattcAAACATATTCCCTCAAACAATCAAgta
ctttaaaggaagaaattttcgcgaggcg
Run BLAST on NCBI

protein sequence of TCONS_00001568-protein

>TCONS_00001568-protein ID=TCONS_00001568-protein|Name=TCONS_00001568-protein|organism=Clytia hemisphaerica|type=polypeptide|length=145bp
MTTYFAPTLSRLPFAILQYGQYVFENTTTLSLRKYQMESILSLLQNNKEL
DNVELMSEIALFAYLSDNAYGKNALKLVTGAKVIQELYRRFTKQDQIIEA
LRADAVRKIALYVEKNPRASTNDQAREIQKHVDDFAAKVALVNGA
Run BLAST on NCBI

transcript from alignment at sc0000011:101035..109826+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001568 ID=TCONS_00001568|Name=TCONS_00001568|organism=Clytia hemisphaerica|type=transcript|length=8792bp|location=Sequence derived from alignment at sc0000011:101035..109826+ (Clytia hemisphaerica)
AACTAAACATAAATGAAGTCTACTTACAGTTCGAGCACCTGTGATTTCTG CTAAAGCATCCTGGATTGCACCACCGTCATTACGATTGTCTAATTCAATG ACAACATATTTTGCTCCAACTTTATCAAGACTTCCCTTTGCCATTTTACA GTATGGACAAtatgtctttgaaaatacaacAACTTTGTCTTTGGCAATAG CCTCTTCAACAAATTTCCTTGCTTGTTCTTTACCCatcttgttttttgtt ttgctggcttttgatgctttttttatttcttttttactgCTGGTACCTCC ACTTGCTTTTTTGTCAGTCACTTTGATTTGTGAATATAATTTAATGATGA AAAATAGTAAATGAAAAATGCAATATATAGTGCTATACCTGAATGCTGAC GATGATGACAAGGCGTTTGTATGTTGTGCAAAACTTAAATTTGATGACTT TTAATTGTGCTGACACACCTTTCCTTGGACCCTGACAATGCTGAAATAgc ctaccattttgaaaagtaGAGCAGCCCAACCGAGTTCGAATATAACCTAA AATTTAATctaaaaatctcttttgaattGAGCGGACAGGTGGATGGTATC TAGGCTATCAGGCTATCGCAGATTCTGATTAGTCAAAAGTTACGTCATCA TTTCTATGATATGGCGGaggtttttttatcaaaacaaaaccaaaaatttc caCAAAGTCTTTATATTTTCCATATAGTTTTATTCTTCCTGTTTAGAGAA AGTATCAAATGGAGTCTATTTTATCTCTCCTGCAAAATAACAAGGAACTT GACAATGTGGAATTAATGTCTGAGGTATGAATTCAAGCATGTTTTTTTCT ACagcaaaattcattttttatccTTCTATTCTGCTTCGTCTTCTTTTTTA TACTCTTTTTTTATCCAGTCTGGAATTGGCCCGTACACACACCAATATAT TTGGCGTGAGCATCGACCTCGGGTTGGAGGTTGGCATAGTATTTGAACGG CAAACGAGGCCCTCTTTAGACACAAAAAGTATGGGCTTTTGGGACTGCTG CTTAGCAACACAGGAGGCATGCAGGGGCTTGCTCTACCCCCTCTCTAGAC CTGTTTTTGTGGGTCTTACTTACAAAACATCCCGCCAAAAACACTGTGGG TTGGCGGCTGCATACAGATTTCAGCTTGAGTTTCTGCGCACAAACAGAAA GTTGTGAAAACCTATTTAGCGTACCTTGTGGTGCAAGAATTCTACATGAT CGGTTTatggttgataatgtttttcTTGCTTATTTTGCAGTCACTTCTTC AAATAGTTCATACTAAAGTGTGGCTGAAATTTGTATCAAAGGTTAATGCT GCAAAAAGAGCTTTTTTGTTTAccttaaaaggaaaaaaagggaaattttc aaaaatttcgccttttttgtgaaatataatCCCTCTCGAAGATTTACACT CATCTCTATCTCACTAAATTCACGAAGCTTAATCCtctcaaaaattaagt tttttcaCGCTAAAAATTATAAGTTTTTTGATAGGCTAAGAAACCCTATA AAATGAGTCTCCATACTCGAATAACACTATAAATCgaataaattttcatt cctcgtagccgtttgagttatggagactctactgctGTACACACAAAATC TCGTAATTAAACTaacaaaaaatgtgaaaatctgaaaatatttgccaata cgcaaaattaaatccttgCACAAAATTGCAGTCGAAGTTAGTAGCAAAAA TAAgtcccgcaaaaattaaattattaattattaaattatttcgcgAAGGA AGCTGTCTCGCGAAAACTGGTtgccgcaaaaattaattcccttaaggtac tttaTTCACAAGCAAAAGAATGCACtacaaaacttctaaaggggtttatg aaaaaataaacgagttactttttaatgaaattagcattttcaaaaacttt tgagccatgaatgaaaatatttgacccaactcaaaaactaatttgaaaaa caactttccaagaaaaagatctaacAGGGAGAAGACACCCACCTAGACCC GCACACTGCTGAATAGGCCATTTCCTGGTTATTTTGACTGACCTCAAACA TAagcagaagcataattacataaTACATCACGCAGGCCTCCCATTTGTCA TAAATTCctaaatttggtaaaaatgtcataaattgtcataaattttgaag atttgtcatataaatttcataaatttcttaCAAACTTTCCCATCAATCAC TCTAGTTTAATTAagtcattctttagaaaagATCAACTTTTTATCGATCT TCAGCCAGCTCTAACCCATATCTTTGTATCGTAACTTTTGGTCAACCAAC ATGATGTTCTATTGGAAGATTTGTTGTTAATCCTGGAATGCGACTGAggc catgaacatataaacgactggacatccatttcctttgtatttttgaagat aacactgctagctttGTTGCATCCtcgataaaaaaataaaaggaaacaat gaattttgatgatataccacttgggaataccttgctaacaacgtcaaaac tttcGACAACAGTCTATGTTGTTCTACTCTTTTTAAGTATTTTATCTATA ttataacaaagataacagagacaaaatcatcgtcagcttgtcaaaactct gactaatatttctaaatttttacttaaaagtgTCGagtaattttagagag tgtcacactcaaatttcactcaaaaaaaattattggagtgacaaaagtga ttcaaaacgcagttgaaattctgcatttcagagacgaaagtgttgataaa atatattgcaaatgtgtgaaaaaattcgagaataattttttttgtgaatt atGACTGATGTTCAAGCTCTATTAATCCTTTTacttaaataattcaaaga aataaaattatgacggaatatcgtcggatttttcatatcaattttgaaat aaaggcggcaacgaagctcgcttcaaagagacaataaaatatagatgtcc agtcgtttatatgttcatgctgaGGCCGAGCCAATATCATGAAAGATTCA TGttgaatttaataaaaatgagTTGGAATAATCAATTTATTTGTGTACAT AATCAATCTATTTCAATGCTAggctgaaaaaaagtttttgtttagtTTCA TTCTTTAGTTTTCCTTGTTTAAGTTTTTCTGAACCAGACGATGTCAGTCG AACCATCGAACAATCGAGCTAATCGAATTTCATCAAACTAATCGAATTTC ATCGAACTAAaagaacgatagctgttcgattaccaaaCCTCATCGAACAG TTATCGAACTGAGAAATCCCCGTAAAGTTTGATTGTGTTCGATAACTGTT CGATGTGTTCGATTTCAATTCCATAGACCTCAACCTCCACTCGTTCTCAG GGGCGGCCACAGATGCACCATCAGGGTGGGGCAGAAGTAGTTGGCTTCCA CCCCGTAAAACAAACAGATTTATTTAAGATCTACAAACTAATAGAACTCT ATTTAAACTTTAAACGAACTTAATCGACAATAATTAACAATATATTATTA TCGAACTATAATCGAACAGTAATTTCcggtaaagttcgattactgttcga tttgttcggtaatcgaacagtttAGTTCGATGaaattcgattgttcgatt aCAAATATTGGTTTGATAACGTTCGGTTGACATCGTCTGGTCTGAACCCA AGTTTTGCATTTTATACTTCCTTTTATGTAATTATTGTTCATTTAGTTAT TTTGATTAAACAGATAATGAATACACAGTGATTACAGTGTCACAATTATC AGAGGGCCATGATTTACATAATTTCTATTCCGCTTTTACTGGACTTGAAT TCATAGGGCTTAAAACCTGTTCTAaacaataattttaaaacaataatTTG AAAGAGGGCAACAATTTCTGTCATAAAAATGTCCTaacttttgttgaaat ttcataaattatcataaattttacacccaaaaatgtcataaaatgtcCTA AAAAAGCATTAGAAACTGTcataaattcataaaaaaattggctAAATCAA GAGTGGGAGaccatcagtattttcgtttcaatcattaaaaatgataatta gctgtctaaatgaccttttttgTATAAAGGGAGGATGAATTTCAATGGaa tgaagaaaattcgtcgaaaaaggccgaaaaatctggtaaaattcattaaA GTACATCAAATACGGGTTTTGAGGTAGATCCAGTCTTACacagactttat ccagtctagaaccaaaaatctgagaaaaatttcggtaaaagtaaattaaa gtgattttgatgaagattttaaactctttcaacccttcagtttcaaaatt tatgtattTAGTTACTGAAAAAAGCTCTTAATCGTGTAAAGGCAATtgtg attgccaattttaaaataaaaatttgataggtcgattttcaacgttttcg agcactttctgaaagtatctttttcattcaattgagcataacttttgatc taatgaatcgaatgtaataaatgacccatcaaaatttaagtttatctttc ttctttccaatgcaatagtgatggttcttttaaaatttttagatttcgag aaaattagtttcgaagagagaaacttttttatggcgcacccggtacaaaA TATCCTATTTAAAGGATTTCAAAGACAAATTATCAGCCCCAAATATTGAC GAAAATGACACCAAaacataaattattttcttgaaCCAAATTTGAGTTAT AACTGAAACTGTGTGATTGGCTTGCGCTTGCTTGCTTTCACCCCTGTAAC ACTTGTACTATACATAACAGCCACAGGTCTGTGTTATACACGACACAGAA TGCAAAAGCACATGGTAAGCATTTGGATAAATTCTTTTGACCATTAAGAA GGTTCTAGATGAATAGAGAATACCTTCAGTATGATAATTTTGATGATAGC aggtgtttttcaaacattttcttttgtgttttacagtaattaaagctgac ctgttgacctgtgacctgcgtttcaaAGCAGCGGTATTTACATGTGcgca attatttttattttagcgtGTAATCAAGGCCTAACAAATTAAAGCGTTAC ATTATTTACCTATAACAATAATCCAAAAGTTTCCTTAGCAATCAATTGGG ATTTTGGCActtttgattgttaagggaacttttggattgttataggtaag tACAGTATTATAATGGACCTTTTTCTAGACTCGATAAAATCCCTTTTATT AATCAAAATGTCATGTTAAATGATTAAAAGCTCcagcattaaaacaatga aacgCATAATTGTCATATGATTGCACTTATTTTTTCtcatcattgttttg atgctgctgGATCTATATTCTATTCAACATGAAATTCTAATTAGGGATTG GGATATTGAATTTCTGTTGAATTTCTCATCATAAGTTAAAGTATACCAAG TGATCgatattgattttgatattttaagaTTATTTTGATATACTGGAGTG TAACAAGTTCTTCTGCGACAAAGATTTTTCATGCTCAATATGATAAAAAT ACATAAGAACTTGACATTTTTGGGATACATTaacttcaaaatttattttt ttgaaaactgctTCTATATATCATCTTACTCGGCAAATATTTGTCTAAAA AAAGGTTGCCTTCGTCTTTTTTATTGAATGAAATAAGTATAtacatagtg tgcacccccccctAAATTAAGGGGGGTTTTGTTGATTTGGGTTCAAAATC TTTAGATGGGACTTccgattttttggatttcagggGGGGAACAGGATTAG GTGGGACCTGATTTTTTAAGGTGGGATTAAGGTGGTTTGGTTGTAAAATT GAAACATCTCATCaacatcaatttatattttCCATCCCATGTATGGCCAT ACATTCCCTTtccatttctattttttaaatgtttcaatTATCGAAATTCT GCTgggaattcaaatttttcaaaatcttggtgGGGGATATACTTAGTGGT GGGACCATGCATGATTGATTCTAGGTGGGGGTTTTAATGTGTGCTGGGAC CTTATTTTTTTGGTGGGACCTGGACCCCCCCCTGCACACTATGTAATATA TGTAAGACCTAATCTGAAAAACTTTGTAACCTTTTTCTAGAAAAATCTTT TCTCTGTCAGATTGAAAACACCacataaatttaaaaatattttaaaaatc atttttataatGAAGACAGCACCTTGAACAGCGCCTTGAACAGCACCTTG AACAAACACCTTGAACAAACACCTTGAACAAACACCTTGAACAAACACCC AATTCCCTTCACATTGCATTGGTTGATCTAAGCGAATGTTCATTCGCTGG CCAAGTGAAACTCTGCGAGTGAGAATCAATCCATAGTGGAGGTGGGGTGC TCTaaattatacacccctgtctcacagccccggcgGTGAAAggtttccct cagtggggataagaaTTCCTATCGAAATGCCAATatgaatagaaattcta ttgtttcgaGCTCAAAGATCCAGTGGATATATTTTTAGGGTGCAagtttt ccattggattttaagtGGGGATGATATCAAACTTAATTTCCCAAtcgggc tgaaattgtagggtattttttccatcGACGAGATTTTGAGAAAGTTTTCC AGCAGaagtctgtgacacaggggtgtaactTTACTAAAAAGGGGACAAAG GGCCTCTTCTTTAttctattaatttttttcttctttttcatcgcTAGATT GCACTGTTTGCATACCTTAGTGACAATGCTTATGGTAAAAATGCTTTGAA ACTCGTCACTGGTGCAAAAGTCATCCAAGAATTGTATCGTCGGTTCACTA AACAAGACCAAATTATTGAAGCTCTGAGGGTAAGCTATGATCCTtctgta cacatttttttataagcaaccaaaGTTGCTAAGGCTCAAGCCCTGAAATT AGCCAAttcactatctcgtaaagtaaaaggtTTTAATATAATCTAAGCAT GACAATAGCCCTTGACCCAAAAAGCATAAATATTATATAATATAAGGGGT GgtcaaggaaaattttttagaaaatgagctagaatgccaAGTAACCCCAG CCCTGATGACccaaaaattggagttgcttataaaaaaatgtgtattatca caataatttttttgcgcaataaAATATTTCACGAAATGTATAAAATAATC AATGCATATCATAAAGTTTTGCAAATCAGTGGGATAAACTTTTAAACTTA AACAAACGTAAAGGCTGAATTTTCGGAATATCAAGATTTGTatcaatttt ggaaatttccatTTTAGGCTGATGCAGTTCGAAAGATAGCATTGTATGTT GAGAAAAACCCTCGTGCAAGTACAAATGATCAAGCTCGTGAAATTCAAAA ACACGTGGATGATTTTGCCGCTAAAGTTGCCTTAGTCAATGGTGCATAAT TAATTTGTACAATATTTAGAATATGTAGCTATTATTTAAATCTttacgaa agcagccggcgaggcgacctttttttccgatgtgttctgagagcatattt cagctagaaattttgatcttttcTGATCAgagcttcgaaaattaatcagc tagaaataatgatgtgttctgacgagacaggggtataatcaaatTCATCT AACGTgctcttgttgtctaggtaaccctagaaagcttcagaacacatctt ttaaggagaccgaggtataatcaagagaaaattgatgtaatctttcgtgg aaaaaaacaaatatctttcaAGTTTATCTTGCCAACTGTTTTTCCTATAT TTGAGGACACATCAAACCATGATGTAGTGACAAGTTTAGGaagacaaata gtgcgataaggtttcctagaaatcagaacacataatttgcataaaaattt gaaaggtcataatatttggtctcctagaagaaaagaacacatatttctaa aaaatctctccgccggctgcttctgtcTTTATATATAAATTACAATTTAA AACATTCTTTTCCATATATTATCATGTGCACTTTAAGATTTTATGGGGTT TTATAAGCAGGTTTGGTTTTAAACGAGTTTGATTTTGGATAATAACCATT TTATCTTGATCGGTAAACACAAATATTTCTTCCatcaaaatttggttttt ctttAACTACACTTTTCGACAAGTTTAGTATTCAGTTATTCTATCTTAtt ttcaacttcagttgagctaaaATCCCAGAATGTATGTTTGTCcgcaaact ttggggcagcgtagAGAGCGGAATAATTGATTTACggagatgaaatttgg cacgCACCTTCCTTAGGATAAAACTtagagattttatttttttccccgaG TTATCCCCATTTAACTGAAATTTTGCGCTCATTTAACGTCATTAAATTGA AATAgttaacttgaaatttttttttgaattctaaaaatacaaaaaaataa tcacCCTGGGGTTACAATCGGGTCTCTCTTATCCCGAACACCTATAACTC TGGGTAATGTCGAGAGAGAGCTCATCACTCtgtttaaaaaaagtgtttac aattgggctTCCACTTTCACACgagttgagcccagtgcttcAGCACGTta tagttttcatttatttgtataatttgataatttttttcagataattaTTT GTATGATTATTATAGAGGATGTATATAATAAACTCAACATGAAATTCTCG ATCAAACactttttttgccaattttactaaaatattcAAACATATTCCCT CAAACAATCAAgtactttaaaggaagaaattttcgcgaggcg

Coding sequence (CDS) from alignment at sc0000011:101035..109826+

>TCONS_00001568 ID=TCONS_00001568|Name=TCONS_00001568|organism=Clytia hemisphaerica|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000011:101035..109826+ (Clytia hemisphaerica)
ATGACAACATATTTTGCTCCAACTTTATCAAGACTTCCCTTTGCCATTTT
ACAGTATGGACAAtatgtctttgaaaatacaacAACTTTGTCTTTGAGAA
AGTATCAAATGGAGTCTATTTTATCTCTCCTGCAAAATAACAAGGAACTT
GACAATGTGGAATTAATGTCTGAGATTGCACTGTTTGCATACCTTAGTGA
CAATGCTTATGGTAAAAATGCTTTGAAACTCGTCACTGGTGCAAAAGTCA
TCCAAGAATTGTATCGTCGGTTCACTAAACAAGACCAAATTATTGAAGCT
CTGAGGGCTGATGCAGTTCGAAAGATAGCATTGTATGTTGAGAAAAACCC
TCGTGCAAGTACAAATGATCAAGCTCGTGAAATTCAAAAACACGTGGATG
ATTTTGCCGCTAAAGTTGCCTTAGTCAATGGTGCATAAATGACAACATAT
TTTGCTCCAACTTTATCAAGACTTCCCTTTGCCATTTTACAGTATGGACA
AtatgtctttgaaaatacaacAACTTTGTCTTTGAGAAAGTATCAAATGG
AGTCTATTTTATCTCTCCTGCAAAATAACAAGGAACTTGACAATGTGGAA
TTAATGTCTGAGATTGCACTGTTTGCATACCTTAGTGACAATGCTTATGG
TAAAAATGCTTTGAAACTCGTCACTGGTGCAAAAGTCATCCAAGAATTGT
ATCGTCGGTTCACTAAACAAGACCAAATTATTGAAGCTCTGAGGGCTGAT
GCAGTTCGAAAGATAGCATTGTATGTTGAGAAAAACCCTCGTGCAAGTAC
AAATGATCAAGCTCGTGAAATTCAAAAACACGTGGATGATTTTGCCGCTA
AAGTTGCCTTAGTCAATGGTGCATAAATGACAACATATTTTGCTCCAACT
TTATCAAGACTTCCCTTTGCCATTTTACAGTATGGACAAtatgtctttga
aaatacaacAACTTTGTCTTTGAGAAAGTATCAAATGGAGTCTATTTTAT
CTCTCCTGCAAAATAACAAGGAACTTGACAATGTGGAATTAATGTCTGAG
ATTGCACTGTTTGCATACCTTAGTGACAATGCTTATGGTAAAAATGCTTT
GAAACTCGTCACTGGTGCAAAAGTCATCCAAGAATTGTATCGTCGGTTCA
CTAAACAAGACCAAATTATTGAAGCTCTGAGGGCTGATGCAGTTCGAAAG
ATAGCATTGTATGTTGAGAAAAACCCTCGTGCAAGTACAAATGATCAAGC
TCGTGAAATTCAAAAACACGTGGATGATTTTGCCGCTAAAGTTGCCTTAG
TCAATGGTGCATAAATGACAACATATTTTGCTCCAACTTTATCAAGACTT
CCCTTTGCCATTTTACAGTATGGACAAtatgtctttgaaaatacaacAAC
TTTGTCTTTGAGAAAGTATCAAATGGAGTCTATTTTATCTCTCCTGCAAA
ATAACAAGGAACTTGACAATGTGGAATTAATGTCTGAGATTGCACTGTTT
GCATACCTTAGTGACAATGCTTATGGTAAAAATGCTTTGAAACTCGTCAC
TGGTGCAAAAGTCATCCAAGAATTGTATCGTCGGTTCACTAAACAAGACC
AAATTATTGAAGCTCTGAGGGCTGATGCAGTTCGAAAGATAGCATTGTAT
GTTGAGAAAAACCCTCGTGCAAGTACAAATGATCAAGCTCGTGAAATTCA
AAAACACGTGGATGATTTTGCCGCTAAAGTTGCCTTAGTCAATGGTGCAT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000819XLOC_000819Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001568-exon-sc0000011-1491911889:101035..101227TCONS_00001568-exon-sc0000011-1491911889:101035..101227Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1510915933:101035..101227TCONS_00001568-exon-sc0000011-1510915933:101035..101227Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1575043694:101035..101227TCONS_00001568-exon-sc0000011-1575043694:101035..101227Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1491911889:101781..101858TCONS_00001568-exon-sc0000011-1491911889:101781..101858Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1510915933:101781..101858TCONS_00001568-exon-sc0000011-1510915933:101781..101858Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1575043694:101781..101858TCONS_00001568-exon-sc0000011-1575043694:101781..101858Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1491911889:107782..107913TCONS_00001568-exon-sc0000011-1491911889:107782..107913Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1510915933:107782..107913TCONS_00001568-exon-sc0000011-1510915933:107782..107913Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1575043694:107782..107913TCONS_00001568-exon-sc0000011-1575043694:107782..107913Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1491911889:108352..109826TCONS_00001568-exon-sc0000011-1491911889:108352..109826Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1510915933:108352..109826TCONS_00001568-exon-sc0000011-1510915933:108352..109826Clytia hemisphaericaexon
TCONS_00001568-exon-sc0000011-1575043694:108352..109826TCONS_00001568-exon-sc0000011-1575043694:108352..109826Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001568-proteinTCONS_00001568-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:101035..109826 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.0079 22.3812 17.9494 19.0134 20.2157 16.3461 30.9819 34.2903 44.2424 36.7096 41.9725 34.3018 46.6884 39.0099 23.5113 25.7439 44.653 49.741 43.9422 58.7619 75.3817 66.9341 36.0596 40.1049 51.046 56.0962 66.6531 60.821 34.4695 32.0402
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001568 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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