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TCONS_00001565 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001565
Unique NameTCONS_00001565
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2615

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001565 ID=TCONS_00001565|Name=TCONS_00001565|organism=Clytia hemisphaerica|type=transcript|length=2615bp
CTGATCAATCGACTCTAGTCGAGGTACATGTAGAACTCAAATaggttttt
caataaaattattattagtattttttgttggaatattttttctttcaata
aaaaaaaagataattgttataaatttacaatttaattATCCTTAAAAAAG
TAGCTATTAAATTATAGAAGTTGTATTTAGTTATTTTAgttaattttaag
aaaaaagtatttttttgttgttttctttagTAATATAGTAATTATATAGT
ACTTTAATgtatttttcactaaaataatcttattaagctcttttaaagaa
aattttccagatttttttataagaaccactgaatttttgctgaggcgaaa
ccatttctaatttttcgtGCTTCTCTGGCTGAAAATAAGCTCTTGCCTCC
TTGCGTTTTGACATCTGAAGTCGAGATTGTCCTTAAAATTTGTTCTCGGT
TTTTACCGAAATTCAGCCTCTtttttctcataagaaaacgTGCAATATTC
GATGGCCTTCTTAGATCAGGTTTTACTGAACATTCTAACAAAAGTTACTG
TATGGGTTCTTTTTTATAGTAATATGTATGTATCTAAGAGGtatttttat
acaatttttcttttgtttactttgttattttgttatacTGTTATAAAGTT
TATTGTCTTACGAATCAAATTTTCATGTTGCTTTTTTCATGGTTATACAa
cagtttcttttttctttaaattttttatttgcgaTTTTGTGTTTAtatgt
attttttaaaaatcactttgttttatttatgatgttaaagtttttgtgtt
tttgtttgttATTCATAAGTTTAAGAAAATACTTAAAAgcaaatttttga
taacgtTATACCCTCGCCCTTTGGGAGATATCCTTTTTTATACAATATAC
CGGATATCTCAGTCACTTTGAAATTTAGTCCTGGGTGTTGTTGTGGCTAT
TATTGGTCAGTGGGTGAGCGAAAAAGCTCCAAAAGTTTTATTGTGATACT
TAATTTTAtgtgttttttataagtattCTTTTGGCAGAGTAGTTTTCACA
TGCTTTCGTCAAAtctttttgctttcaatttcaggagttaaaaataaatt
taatcgaaaaaaatataaaaattaaaacatctCAACCTTATGGTGCAAAA
AATGGACCAAGTTTGTCTTCATGAAAGGGTGACGTAGGTTATGTAAgtga
ttttgattatttttatccAGAATTATTCATCGACGATAAGTTTCCAAATG
TTTACTTTTCTGTATTAAGGCCATTAAATTATCTTGTATTCATTCTTAAT
TACGGATTTCTTTGATTCCATTTTCTCCATACAACTTTTTGGAGTCCATT
ACTTGTAATTTAACACCATTACCAAGTTggtctttattttcttctttttt
aaacaTCAGGCTCGGCTTCATGACGAATACCAAACGTATTGCAATATCAA
CAGCTGATCCAATCGCCTGTTGCCATCCTACCACATCCTTAAAGACATAC
ATCAAAACCACCCAATACCAATCACAAACAAAGAAAGCATACATGCAAAT
CATCTTGATAGACTTTGGTAAAATAACATTATTGTTGGTTTTTGGGAATA
ATTTTTGACGTAGTCCATCGAAATTGACGAAAGCTTGTAGAACACTTGCG
ATCATTAACCAACCAGCAATCATATACGTTGAACAATGTGCAGCTCTAGA
ATAGAAAGTAGGAAAAGCCAAAGCTGCGGTCACCATTATGGGTGACGTCA
CGATACCACATTCCTCATCATCAGCATCCCTCATTGCAGAATCATCCGAA
TCACTCCCTTCGTCTCCGCTTCGATGGCGATCCCTCTCAATCTCTGATAA
TCTTTTAATAGTACACTGGCTATCTACACGGTTTGAATTCTCAAAGATAC
GCATACTGCTGTCTAAGGAACGCAACTCGACTTGACTTGCGTTATTGATA
CTTAGAAGACTTCCCCACTTTTGGATTGCGACATCTTTGTATAAGACTGC
TTCTTCGTTGCCATCGAAACAACAACACCAACAAAACCCTTTACGCCCAC
GTTTTTTGTTCAATTTACGGAGGCGCCAAAAAGCTTGAcataaattcaaa
atggtagctgctAAGGTTGACATTCcaacgaaaatgaaaacaaaacatga
aacCATATAATAAGTGTTCTTTTGATTGTAAAATTTGACTTGTCGAGTTC
CTATAGTTAGAATGGTCAGCCACCAAAAATGGAAATGATCAATGAAAGAT
CCGTAATCTTGATTCATGGACGCTGTAGTAAAACTTGCTCCAACGATTAC
CGAAACTAAGAGAACCACAGTGATaaagaaacatttaaaatgtaaaaatt
tgatGTATCGTTTATATTTTTTGGCTGTTTTCAATTCAATCAACACCACA
AGTAATTTGATAGTGTTTAATATGGTTGAACCGAAATTTGTGTAAGTGAT
TATGGTGAATGAAATACCGAAAGTGGAGTAAACAATGGATGCGATTTTAC
TTGGAGCATTGTCAAGAATGATACCAAAACCTATGAAAAAAGAGTATTTT
TATTAGGTTATAACAGCACAAAGATGTGTTATACTcttcttaaaaaataa
ttctttagaTTAGAC
Run BLAST on NCBI

transcript from alignment at sc0000011:48114..64644+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001565 ID=TCONS_00001565|Name=TCONS_00001565|organism=Clytia hemisphaerica|type=transcript|length=16531bp|location=Sequence derived from alignment at sc0000011:48114..64644+ (Clytia hemisphaerica)
CTGATCAATCGACTCTAGTCGAGGTACATGTAGAACTCAAATaggttttt caataaaattattattagtattttttgttggaatattttttctttcaata aaaaaaaagataattgttataaatttacaatttaattATCCTTAAAAAAG TAGCTATTAAATTATAGAAGTTGTATTTAGTTATTTTAgttaattttaag aaaaaagtatttttttgttgttttctttagTAATATAGTAATTATATAGT ACTTTAATgtatttttcactaaaataatcttattaagctcttttaaagaa aattttccagatttttttataagaaccactgaatttttgctgaggcgaaa ccatttctaatttttcgtGCTTCTCTGGCTGAAAATAAGCTCTTGCCTCC TTGCGTTTTGACATCTGAAGTCGAGATTGTCCTTAAAATTTGTTCTCGGT TTTTACCGAAATTCAGCCTCTtttttctcataagaaaacgTGCAATATTC GATGGCCTTCTTAGATCAGGTTTTACTGAACATTCTAACAAAAGTTACTG TATGGGTTCTTTTTTATAGTAATATGTATGTATCTAAGAGGtatttttat acaatttttcttttgtttactttgttattttgttatacTGTTATAAAGTT TATTGTCTTACGAATCAAATTTTCATGTTGCTTTTTTCATGGTTATACAa cagtttcttttttctttaaattttttatttgcgaTTTTGTGTTTAtatgt attttttaaaaatcactttgttttatttatgatgttaaagtttttgtgtt tttgtttgttATTCATAAGTTTAAGAAAATACTTAAAAgcaaatttttga taacgtTATACCCTCGCCCTTTGGGAGATATCCTTTTTTATACAATATAC CGGATATCTCAGTCACTTTGAAATTTAGTCCTGGGTGTTGTTGTGGCTAT TATTGGTCAGTGGGTGAGCGAAAAAGCTCCAAAAGTTTTATTGTGATACT TAATTTTAtgtgttttttataagtattCTTTTGGCAGAGTAGTTTTCACA TGCTTTCGTCAAAtctttttgctttcaatttcaggagttaaaaataaatt taatcgaaaaaaatataaaaattaaaacatctCAACCTTATGGTGCAAAA AATGGACCAAGTTTGTCTTCATGAAAGGGTGACGTAGGTTATGTAAgtga ttttgattatttttatccAGAATTATTCATCGACGATAAGTTTCCAAATG TTTACTTTTCTGTATTAAGGCCATTAAATTATCTTGTATTCATTCTTAAT TACGGATTTCTTTGATTCCATTTTCTCCATACAACTTTTTGGAGTCCATT ACTTGTAATTTAACACCATTACCAAGTTggtctttattttcttctttttt aaacaTCAGGCTCGGCTTCATGACGAATACCAAACGTATTGCAATATCAA CAGCTGATCCAATCGCCTGTTGCCATCCTACCACATCCTTAAAGACATAC ATCAAAACCACCCAATACCAATCACAAACAAAGAAAGCATACATGCAAAT CATCTTGATAGACTTTGGTAAAATAACATTATTGTTGGTTTTTGGGAATA ATTTTTGACGTAGTCCATCGAAATTGACGAAAGCTTGTAGAACACTTGCG ATCATTAACCAACCAGCAATCATATACGTTGAACAATGTGCAGCTCTAGA ATAGAAAGTAGGAAAAGGTATTAAATCATTAAATTTCATTAATCTACTTT CATTATAGTCCATCTTAGATCGAGACCCaaagtattttttataatttaca TCCTGTTTTACTCCTTTCCTCCATTTCCACTTGGGATATAAAAAGAAATG GCTTATTCTCATTGAGTCTTGgtttttacaagttttgatttttaatcaAT TCTTTACTTGTGCAAGTCACAAGCTCTTTGAACAATGGCAGAAAGTTTTC CTATGGAATCATGGTCCCATGGAAACTGTCCCCCATAAAAAATGCACCCA TCAAATTTGACCAACATtggaattaaaattttcaaatttttcaaacatat tAACCCTTAGATCACGAGGGACGCGTATATGCGTCCAAACAAGCCAGAAT ACTCTCTCAATAAGTCTCAGACTTGAGGCCATAGCTCCTggccacttgat ttaaagggggataaaccgaatgcttttagaaagagtatgaaaatagcttt ccaatggtaccaaaaccattttctagatcaaaagctacaagcttcgatga cattttaaagttttgagtttaaaaaaaaaattagaaaaatttcaactttt tcaaaaaaaacagtGCACAAACATATTTAGGGTTACCTGGTATTGcagtt taaatcatgttttaaCCAGTAATGACCGAAGAGTGAGTCCCACTCCCATT GTGTGATATTCATCTGTGGACCatatttattttcgaatttATACTCAATA CTCTGCAATTCACATTGGAAAAACAAAGTTACAAAACCAATAATATTGAT TAAGATACATTCGTATATAACGTAAAAGTAATAGACGGTGCTCAACTCTC CCGTGTTTGTTGATTGTGTCGATGAGAAAATCTTCTTGGAAATCTTTGCC ATGTTTTCTTTAATATTTCATTTGTGTTGAACTGTATAATTTGACATTGA TTTTTTCACTGCTATTTTGATTTCTGTCCTTATCTTTCTTGCTCTATTCC ATTTAACCCGCAATGATATATTATCTACAAGGCTTTAAAACagtgttgtt tttgttttgtttgctcATGGTTTCACCTTTCGTTTCGTATCGTTTTATAC AAGCTTAAACGAGAATAGCCATTTGTATTACATAATGTCATCATTATTAT GGTTCGACCATGGACGAGGCCTTATCCTTCACAATCCCTTTCTAGACATC CCTGTCAGGGATCGCAATTCCAAGTTCCTGTCTCACAATCCCATTAACCT AGAAGATTAAATCCGGGAGTAAGATCTTTCTATCCCGATTGATGGTATTC AAGGGTTTCCGTAGAACTAATGTTTAGATAGTGTAAACCTATCCTAAATA TGTCGTCACGTGACTTTATTTTTGTACGCAACGAGAACCACCGGAAGTAT ACCTGACCTATTTAATGATATTAAAGTTATTCAATCCGCGAATAaattta taagatttttttttcttcaagacTTTTCATTTACGTATGAATATAGCCAA CGAAAAAGAAATCCCATAGGACCCTCCAGTGTAAGCGTTTGAGCGCCTTT TTCTCCAAAGATCACAATGACTTAAGTCATATACGCACTTTCACAAAAGC AACTTAGCCTCAGATTAATTTCCCAGCGTTGCTCTTTTTAACTTGATCTT AGTACATAACCAGGTTGACTGAGATTTTTAATCGGGATTAGAGCTCGAAG ATTAGTCTCACAGCTTGTATCCTactattgttttttttcactttataaAA TTGAAAGTGTGTGAGAAAGATCAAGTTATACTTTAAAGTTTAAATGTAGC ACCTTTCCTGGAATATTATCGGACAGGTTTTGTGCAATGGATAGTTCTTT TTTGCAGTCAAAAGATACCTCGGATTTATCACTAGTGCGACCATTTATTA AAAACTAAAACCATTCGATTCCAAAGAGGcccccaagcggttttcgtgat ttttttgcagtgtgattacgtgatttggaaattttttctgcgtgatcaga ggtcaaaactGATCGTGATTTGgaagatttttgagccgtgatacgtgatt tggactttttcaaagggatcgtgattgaagaaaaaaaaatgcgtgatatC GTGttcagagttaccgctgggggCCTCCCCAATGCACTTCGATTAAAACT CTTTTGGTCAATTCTCACCGAACCATACTGCGCATGTCAAATTATTACTA GAATCTTCCGAAAATTCAAATCAAGAAGTGATTCAATATCGAAGCTTTAT TAATGGAATTAAAGAATTTTCCTGTAGTTCTCCTGTATTTTTAACACATG CCCAGGCACGAcgaaagctttttatatctggtacggcgaatgaggaaatt taagcgattttatagcgattatACCGACAAAGACGACTATTTCggcgtac ctgccgtacccgttgcgtcgtgcctgaTGCCTATTTTTCAAGTGGTTAGT GATGTGAAAGGAAGGCTTTCTTTGACTATTTTGAAGTCTACACAAGGTTC TGAAACAGGGGTTCTTTTTTGACaatttggtaaattttttaaaaactttt caactttgCTTTTCAGTTTGAAATCTTTAACCTCAGGTTATGGTGAtaat cattttgtttttttcgttGCATCTCGAATgcagtgtttttctttttagta catttttattttcttccaaTCGAGCTCCTCTCAGCAAACTCGTAATTATC GAATGAAAACGAAGTTCTGCCAGAGGCTGTAGCATAATGGCATTAGAAaa agtttgattgtttttataaacCAAAAGAAACCGTACAATATTTACCACAC GAAATGGAAATCACTATCCGTTTGTTACAGTTTTTAAGTgtattatttga aaatttacgTAATAAATTTGCTTAAATTTACCATATTTGTattaatattt tcaagtttaaaatgcaatgtttttgtaatttaacatgttttaaaaatcga taaaaaatatcaaatttaaaaaaatgttaaaattttttaaaaatttcccg tCTCTGAAAACAACTTTAACGCGCCTATTTCATCTgttttttgaaagaag aaaattttaaacagtGAATTAGATTAACGTTTGAATGCAGGGTAGAAGAA TTTTGAAGTAAAGTCTTAGCGGTACCTGCTGTATTGTTTGACATATTTAT ACATAGTTGAACTTGTTATTTGTCACAAACAAAATAGTTGGATATCTGAG ACGAAAGGTctgaaaacaaaattaaattttgtttgatgcatgaaagaaag atttttaaggGAGAATAACTCTATACTCAATACTGTTCAAGTTGTTTCAA CGATacaaatgaaaaaatagtttgaaccAAACTGTCTGCCATTCAAGGTT ACACCccctaaagatatttcaatttcatATTCTACCGAATGAGAGCACTT TtgtgcaatctgattggttcttCTTAAATCCTATTGCAATCTAATTGGCT CAATTCTGAACTGCTCTTCTCTGATTGGCTGCGGTACAAATTGCAAAGGC GAAACGAATAAGGAGGTCAATATTTTAACATTATTAAATGATGATTTATA AGTTGGATCTCTTTATTAAACAAGTGAGTGTGTTTGCAAGCAGCCTCGTC GAGATACAGTAAATGTTATTGACAAGCCTTGGATTCGATTACAAAAACAT CTTCAGATTTTCAATTCAATCACATTgaaaaagctttcaaataaatttgG ACGAtagtttttctttcctttctttcATTGGACGCTTTTTATTGCTTGTA TACCGTGTTTTTATGCCAAAACGCCAAATCTGCTGGTTTGAGATTTACGA AAACAAATAATCTTTTGAAAGAGTGAGGAACAGGAAAGAATACATTCGGA TGACATATTGTTTGTGTGATATCTTTCACTATCTTGCTGTTTGTTGTtga tgttaagaacattttgttgATGATTAAGATAAACAATTTGGAATCATGAA TACGGTTGTTACTTCTGAATATTTACCAACTCCATTCCATGGAGGACGTG TTGGAGGAGGCTCAGTCCCAAATACATCTACAAATGACCTGAGTACAGAA AACACTTTTCGCTGGCCACACGCTGCTATCTCAGGTGAACGCACTTCGCC AGTTGCTATCACAACCAATGGATATAATTTCTTAACCGATCGCACCATAC CAACTGGTGCCCCTACAACTAATACTGATGCTTCTGGTGTCCACCGTTTC ACTGTGTCCACAGATCCTTACAAATTTACGCCTTATGATTCCGCCATTCC ACCATCGACCGCCCATCAACAGGATTTCCAACGTTTTGATCCTTATGGAA ATCAGTTTCGAAATGCTGCGAATTTCTATCGTAAATCAGATCTCAACGCA CAAGAACAAGTTAACGTTTCAATGACTTTGCCACCTGACACCAGAGGCTA TCCAACACCTCCCAATCAAACGGTCGCCAATTTGTCACAGCCTCCCCTAC CATCAGCTACACTTAACCAGCCTCCGCCGTCTGCATTCCAAAACACAATG TCTACTACAGGTTTTCAAACACCACCCACATATAAACCTGAACTAAGAAT GGACTTTCATGATGATGCCAACAGACCAAGAAGTTATAGTCAACCCAACT ATGTTGATAATAACTTTATACCGACGCCACACCATCATATGATGGAAGGC GCCCGCCCTACTTCGACGGGTCTAATGGGCGGTGAGATGATGCAACAGCC AAAACAAGACCAATCGCCTGAAAACAGTACGAAAAACGAAGTCCAGAAAA TCATGCAACAACAAATGAACAAAACTGAATCAAAAACACCTGAAAAGACA CAAGATGTTAAAAACGAACCCATATCCAAAGACAATACTACTAAAACTGG TACCAATAACGGTCAGCCACAAACAGAGAATGGTCTACCCAGCTACACAG CTATGATTGCACAAGctattttaaagaaagaaagtaGTAAAAGTACTTTG TCAGACATTTATGAATATATGGAGAAACATTTTCCTTCATTGGAAAAGCG TGGTACCGGATGGCGAAATTGTGTTCGTCACACGCTCTCATTAAATGACT GCTTCATCAAGTTACATCGACCGGAAAATGGCCGTAGCTGCAACTGGGCA ATTCATCCGACCTATTATGAAAGCTTCTCCAAAGGCGATTACCGGAAACG TCGGGCATTACGGAAAAGGCCACGTGGCTTACAATGGATTGATCCGGTCA TGCTTGCAGGGTACCAGTTCGCTCGAGAGCATGATGTCTACCCAGAAATG CACCAACAACCATCGCCCTTCTACCACTATCCGCCCCATCCGGCTACAGC ACCGCCCGCTACAAACATGCACCCTGGATCCCCTCAAGGATACTATCATT CATCATCGGTTGgtaatttcaatcaaaatttctcCGCCCCACCTTCCACC CATCTTCAACAACCACCCGCCGGTATTCAACATTATTCGCCACATCAGAA CTATGCTGGGCCACCACAGCCTGGCACAAGTGGCCACCATCACATGTCTA ACGCACCTCATTGTACGAACCCTGATTGTTATTGTCAATTTTCGAAGCAA ACAAGAACATATACCccctgaaaatgaaataatacTTTTGCCTTTAATTG TTTATGTTCGtgtaaataaattataaattttaatcTTCGaaattttccaa gttttaatTGGAATCTGTATATTTCTGATATGTGTTTTTAACGGTCTAGA GCTagaatttcagccatttttagCCTTTGTTAATAATAAATCTAGAACTC AACTGTTGCTTTTTAACCGATGGAAAAGTTAGGGtgcaagaaaattaatt ttaattctttGAGTGTGTACTCTTATAAGATTCTAGATGTGAGTGTTTAG TTTTTAGAATTCAGTGatctgtaatttttttatttatctaaTTTTTATGA CTTTGTTTAAGTATTTATAGAATGAATAATATTTATATGATAAATTCTTC AGttacaaaaaattgaacttGAATTTTCCTGATCATGTATTTCTTTGGAG ATcttaaaaaaagatatttaaaaacttTCGTCCAAACCAAAAAATGTTAT TCCATGTTAAACTCCTTATAATTTTACGTGAAAATTcgtaaaatttttga ttttattccgaaatttctgacgttttttcgaacattagaaagaaaatttc atatcaaattttgatCGGTATTTTAAGAATTTATGGCCTTTTAAGCAGGG ATATAACATAGACAATAAGaggaatcactatctaagaaataagccaaaag ccgaagaaaattcgcaaacagtctttttgccgaaaagagtttgcCAGCCT TCGAAAcgctcccgccgatttttttccttATACTGCCATAACGCCAtatt tcccgcctttactatcactgtaagtaaaggacgataacatcgtcccATCT TCTTGAATTAAAGGCGGATCCAACTGATCAGGCTGAAAAGTGGGAGACTG AAAATGAAACTCGTAAGAATGCTAGACGCCTGCTACATCCTCGGTAGCTT ATTCCGaccaaaaaagctttttgaaattattaaccTAAGACCttcctttt ttaacttttttggcaaaaaaatcttttttttacctttcCTCTGTAGAGCC CCTCGCCAGGCCCCCCCCCAAAGTCGACCCTTAATTCACGTATTCAGAca attttttgccaattcacgtattcacgttcgaaaaaaacaaaattctttag tttttctttaaacTTGCAACAGTTATATATTTTACgattccaacatttca tccaacatagaAATTGAAATGTTGGACAAATGTTGGATGAATTTTGGAAA GGTGTCGTCGCAATGTCCAacatcattttcatccaacatgggtgttcatt cattctttttttaatttattctttTCAATTTAGAAATAGCGAGGATTCTT ATACCCAGTGTAACCAGTGCCACTACTGCTGTTCATGCGGACAAAAGTTA TAGAACAATTGGACCCTTACAATGCAGAGAAAACTCTAGCGAAAAATtgc aatttcttgaaatttatttatctatttcaaggcaaaaaattttgcaacaa aaactaagTTTTCATTATTTACACAATTTTGGGAATCCTGAAAAACGTAC CTTTAAAGGGTCACACCTCTACGATAGATCGCTTAATTTCAGTGCCCCCT TGGTTTATTTTCcgtaaaaaaaacattgaagctacaatccgtgccataat atatttgcactttttgctaatttaccatttttcgaaaattgaagttcgag cgagaatgtcaatttcaggccctcaacttgatttcatcgattatttcgat ctgggagggatttattggtttctaggctatatttcaagccctactggatc atttttgaacttttggatcctcagatcctaagcggtcttaagtctagcgt taaaactcagagttaaaactctaccctttgaacctactttagagcacttt caaatcgattgtggtttcaaaacaccccggtgaatttcccttttatgcca agtattttgtccctgattgtaggAATCGTTTACCTCGGCCTTAATGCTGT GAGGGTGCGGCAAGAGATGACAATGCGAGAGTACATTGAGTATTTCAGTA GAAAGCTTCGACTGACTTCGGACACTAATTAAAACGAAAACCTTTGCCGA GTATACCGAATGGATTTTTTTCGAGACCCTTATGGTTTCCTCTACGACAG CTCAGAACGAATTTGAGACAACCTGAACACCCAATTTTGACCACCGGGGT CTGGAGGTTTTTGTCCAGGGGGACTCCTATCAATCCGTTTTTAAGACAAC TCAAAGGCATGTTGAATTTGAAACGAACTAAAAAAAAGTGCCTGAAAGGA CCTCGAGAATCATGCGAGAATCGACCTCGATAATTGTTGTAAAGAATATG GTGTTTATTCAATTTTGACAGTAGGCaaagaaacattttattttgatata tcCCATAGGAATTGTCAAAGTAAAGTAGTGTTTTTTTCAGTTGAgttgaa gtttttataagatgctcacataattggttattcaaaacaatagagatgac gtgttctttagaaaaatataataaaagtttttttttgaatagttaacgac caatccaatgacaaaaattcttctAAATGTTCATCTTGACCCgttttttt atcaagatttatcaatgtttatcaaagtttctcctGTGTCATATtacgcc gtgtcaattcaagacagccttaagtccattttttccattttgagataatt gactttaaaggttgggatgtgttggacttaaggctacacattttatgtca atgcttcatagaaaataaaatttgcactGAAATCtaggacttaaggctgt ttatggttgatatattatggaactttctaaatttttattttttttgaatt gcaaaatacacctctttcccattagaattatgtggacttaaggccgtttt tggaaagcgtgcatgctaaaatagggggttatggtcttaagtcaattttc agaaaaatggacttaagtctgtcttgaattgacacggcgattaattgtca tgagacatccGATACCCTGCGtcgttaagctgtagctgaagtTCTTGAAG TTCTTTGGATGTTGAAATTGGAAAGCATTGATCCGATTTAAGGAATCTAA AATTTTGCCTgcgtttttcttaaaaaacttttgaaacgaGATTACCCATC AAAGCAATatttactttttgatttttttggcatttttcgtAAACCAAAAA CAGTGATCATGTTCCAgtcaaaaacatttgaaacaagTTTACgatcaaaa cattttaaaggATCATCAAATTTAACAACAAACACCAAACCTCAGACGCT GTTAGTAAATCAAATCTATCTATATAGTAACATGTGAGAAACgtgaaatt tgttgttttatggGCCAAGCTACcgaaaaaagagggtcggtcggtcggcg aaataataaaaataaaagtagaatttcacctgCAAAACCACCTAAAAAga cagcaaaaactactaccaTCTTGGCGAAAATGcgtaaaagaaaataaaaa gacacagaaagctcgaattcatggataaaatgaaaaattgaacataaaat tctcgaaacctttgaaaaacaaccaaaattttaaaaattcactatgatat gttatgaaaattaattttatttttatttcgatttttgaaatttcagggtc ggtcgggcccgtaaaacaactaatcaaattggtctcgcgtTATGTGATTT TTTAAACTGCAGGGTATAGTGCTATACTGTTTTGAATCACATTTCACACA ACCTTTGGTGTATAAACGCCTTTTGAAGTATTTccgatttatgtaaaaat atcGTAGCAAAGAACTTTAGgatgcaaaaaaggaaaatttgtgCTTTTGG GCAAAGTTACAGCGTTGAAGACCACCCACAcatttgttttagttcttttc CCATCCCTTTTAatataaaatgcaaaaaaaaccgCAACAGCTGTACAGGG GAAATGCTCGACATTTGAAGAAGGAGCCTGAGAAAATTtgttcatgaaaa attgaagatttcTGTATGATTCTGTATGATCTTATAATCCAGTTACTTAG TAGGTGGTAAAAATCTTGCaatctttgaatatttttcagCTGTCAGAGTG ATGTTTTCCTACAGCCTTATTTTTGAAGTGAGAATTTCTAACTCAAGAGA GTaaatattctttattttctttttataagtaCTCCATAAATTAAGATGAG GCTTGTGACATAGTTTCTAGaggtaagaggacccccccccttaagtgcta accacacttaggaaattcatttaaaatttcacacccccataaaaaataag tataaaatgaaacgattgtacaagagtcataattcaaggaagatcccCCT TATTTAagagaccccccccccttaggtaagaagaccccccctaatacacc gtttaacagtgtcgactgcgcacgcgtatgaacaattttccattatgttt tgattttggcaatcacgggaaacttcactctcccccgtaaaaaatggtag gtaaacatccagttctcataagNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCcccccct aaatgtaggggggtagaaactatgtgtgatatttaaaaaattttaatttt tagtcaggcgagaccaatttgatcgggcccgaccgaccctgaaattccag aaatcgaaataaaaataaaattgattttggtagtacattttcATTCCTTT ACAGACTGCCGAATTCTCgaaattttgatagtttttccATGACTTTGAga actttattttcaatttttttattttatccataaattcgacctttttgtgt cttttcattttctatttcgcatttttgtcaagatgtagtagttttcgctg gctttttatttttatttttacgcCGACCGACcaaccctcttttttgggta gcttgggcccgtaaaacaaaaaattaagttgGCCTCGTCTCATAAGATTT TCTTTAGTGATTCTTAAATTCTTAAGGAGAGAAGGGAATTTTAAACAGGT TAAAATTTATAGTCTCGAACGTGTGTAGAAAATGAggaaagaaaaatcat aaatttgaaAAGTCCTTAACATGAATCATTCTAATAAGTTGTTTagaatt ttgcaaatttgagcCTTGTGATTAATtgccccagccccactggaaaattt ggccaaaatctcGTCCCCGATGGGaagaataccctacaatttcaccCCCA CTAgggaattgactttgatttcgtccccattcaaaattcaatgcttaaga attgcactccaaaaccatcctcacTGGCTTTTTTaatcttgaaacaatag aatttttatccccattgagatttcaataaaaatttcatcCTAACTGTGGG AAAatgtttcaccggggctgtgagacaggggtgtaaaaataGAATCACAA CATCCAAGAATATGTTGAAACATCAACCACACATTTTTCTGTATTTAAGT CCAATAGCTCTAGAGAATCTGTTAAGGATTTACTTAAATTCCCTTTTAAA CTCATTATGTCAGGccagtctgaatcgcagacctccacaaaaccgcaggt agtatagATTTCGTTAGAGGATGCAGGCAGCCTTCTTTCAGGCCAGTTTC aattcgtcaaaatttcttccctcgagaaattttatttgaaaatagggGAC TGGtaaataattgttttgtttttcttcataCATCCGACAAATAAATAACT GGATCACTAGATCATTTGCCTGTAGGTAAGTCATTTCTGAGGAAAAAATC TCAGTTCATATAAACAAAATGTTATTGATTCAATaaacattttcattgtt ttgattctgtATTTTCCGTCTGAACTGATACTTTAACTCTCAAGTTCTAT GGCAACTGAAAGTGCTTTTCATACATTTTCTATGTATatgaaatataata ttttatacTTAATTCACCTATAACTTGCTCTTTGTAAAGTAGCCAGCTAT CATATATAACATAAATAACTCAAATACTAGAAAGAGCAAATACTAGAAAA AGCTATTGGTATAACTGTCACAACAAATCTTTTTTGGGAATATGGATTGT ACAAAATTCAATGGTGGTTTTGAATTTGCATTAGCTACTTGCATCGTAAA CAGTGTTATTGGATTTTTAGCTGCGGTATTAAATGGGACAGTCATGATCA CTGTACTGAAAGACCCGTTGAAGAAATTGCGTACGCCCTTTAATTATTTG ATATTCAATCTATGTTTTTGTGACTTTCTTGTGGCGAGTGTTGTGGCTCC TATAACCGCTTATGCAGGgtataaagagaaaaatgtcGTTGTCTTTTGGA TGGACTTGGTAGCACCCGATATTATTATTCTAGCTGCAATATTTAGCGTC GGTGCTTTATCTTACGATCGCTACAAAGCCATCATAAATCCTATCAAGTA CCGTGTAAACATGAGCTGGCAACGGTGCGTCAAATATTCGATGacaattt ggattttggctattttagcaGCAGCTCCGATGAAATTTATCGATCATATT CCTTACGCTGTTATTATCCATTCGAATGTTATAACCGTGGGGCATGCGTT GCTCATGGTGTTCGTGTACATCCGTGTAAAATATGCGCTACGGGCACAAA ATAAcgaattcaaagaaaaactcaGTGCATCCTTAACAAATTCTCAAGAG GCAATTGGCCTTCgaataaaaactgaaaaaaatgtgGTTGGCGTTTTCAA CATCATTCTGGCTGTTGTGCTCTTATTTTTGATACCTGGTCTGATAGCAT TCGATTTATTTGCATTTGTATACCGACATGAATGCTTTTTTGGATTTGTC ACAGATAACATCCGACTTTTTGGCTTTATATTGAACAGCCTTGTAAACCC GTTGATTTGTATCTTTAAATTAAGAGACTTtcgaaaatcaatcaaagcGC TCATGTGCTGATTTGGGTATCAGACAGCCGTTTAATCACATGATTAAATT CATAAGGGCGTCTTCTATAAACAAGAACATTTTGGCTGTCTTCTTGACCA AAATTCTTTAATAACTTCTGATagactttaaaaattttcttagaatTTGG AGAGTATTATACTATAGGCCCGGGAGGGTACCTAGGCAAAATTGCGGGTA TAGGCTGCTCGATGGGCTGCTggtcagggtcacttttttaggctctgaag atatctgacagggtcccaaatttactaactTTCAAGATGTGCATCTGACA GGGTTGATTTCTGgttatttttgacagttttcagggtgaaaactttcaat ttttttgtctactttcagtcatttttcagtcatttttgCCATCTTttcat ggtgaaaataagaagaaTTTCGATCTTTCGTTTTGACAGGGTCCCAattt tcaaactccagtggcATCTCCCCGTCggggtcagtgcccccccccccgga ttagATTTATTTACGATCTCTGACCGGTTATGCCGTAAATAGGTATTTAG TTTTGCATAAAATACTGGCTGGTCTTTAAAATATCAACGGCCCAGATGGT CGAATTTTATAAATTAACTTTATTTGTCAACTATCACTGGTCGAAAGTTT CTATAAATCTTGGCATACGAGGGAAGAGGCCTCAAGGTCAATAGATCATA AAATCATcaagaaaaaatctgaaataaatcaaaattttatacaTTACTTA TTGAGATGATTTACTCCTTTAGGTCTAGGTCACCTAGTATCAAGCAAAGT TTTACTCAGTTTATTGGCGTCCTGTTTATACGAAATCAACAAAAGAATAT ATAATGACTAGTCATTTTTAATAAGTTAATTTCCGAtctattgaaaaata tataaatttgcTATCTTCGATTTAAATTAGTGTCTTTATTTGGAATGATT GGATGATGTAGAAATTTAATTTACTTGgctattcaaaaaaattctatttt ttgagcataatgttattatttttcctAACATGTTTTCTTTATTCTCAGGT TTCTATCATTAGTTATACTTGACGGTGCTTTTGAAGTGGGTAACAAGTTC ATCAACTAATATCATTGACCGTTCTTTTTGTAGCCAAAGCTGCGGTCACC ATTATGGGTGACGTCACGATACCACATTCCTCATCATCAGCATCCCTCAT TGCAGAATCATCCGAATCACTCCCTTCGTCTCCGCTTCGATGGCGATCCC TCTCAATCTCTGATAATCTTTTAATAGTACACTGGCTATCTACACGGTTT GAATTCTCAAAGATACGCATACTGCTGTCTAAGGAACGCAACTCGACTTG ACTTGCGTTATTGATACTTAGAAGACTTCCCCACTTTTGGATTGCGACAT CTTTGTATAAGACTGCTTCTTCGTTGCCATCGAAACAACAACACCAACAA AACCCTTTACGCCCACGTTTTTTGTTCAATTTACGGAGGCGCCAAAAAGC TTGAcataaattcaaaatggtagctgctAAGGTTGACATTCcaacgaaaa tgaaaacaaaacatgaaacCATATAATAAGTGTTCTTTTGATTGTAAAAT TTGACTTGTCGAGTTCCTATAGTTAGAATGGTCAGCCACCAAAAATGGAA ATGATCAATGAAAGATCCGTAATCTTGATTCATGGACGCTGTAGTAAAAC TTGCTCCAACGATTACCGAAACTAAGAGAACCACAGTGATaaagaaacat ttaaaatgtaaaaatttgatGTATCGTTTATATTTTTTGGCTGTTTTCAA TTCAATCAACACCACAAGTAATTTGATAGTGTTTAATATGGTTGAACCGA AATTTGTGTAAGTGATTATGGTGAATGAAATACCGAAAGTGGAGTAAACA ATGGATGCGATTTTACTTGGAGCATTGTCAAGAATGATACCAAAACCTAT GAAAAAAGAGTATTTTTATTAGGTTATAACAGCACAAAGATGTGTTATAC TcttcttaaaaaataattctttagaTTAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000818XLOC_000818Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001565-exon-sc0000011-1491911889:48114..49830TCONS_00001565-exon-sc0000011-1491911889:48114..49830Clytia hemisphaericaexon
TCONS_00001565-exon-sc0000011-1510915933:48114..49830TCONS_00001565-exon-sc0000011-1510915933:48114..49830Clytia hemisphaericaexon
TCONS_00001565-exon-sc0000011-1575043694:48114..49830TCONS_00001565-exon-sc0000011-1575043694:48114..49830Clytia hemisphaericaexon
TCONS_00001565-exon-sc0000011-1491911889:63747..64644TCONS_00001565-exon-sc0000011-1491911889:63747..64644Clytia hemisphaericaexon
TCONS_00001565-exon-sc0000011-1510915933:63747..64644TCONS_00001565-exon-sc0000011-1510915933:63747..64644Clytia hemisphaericaexon
TCONS_00001565-exon-sc0000011-1575043694:63747..64644TCONS_00001565-exon-sc0000011-1575043694:63747..64644Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:48114..64644 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.259918 0.227608 0.0878924 0 0.314761 0.0475402 2.3474 2.41243 1.35638 1.59247 0.693459 0.587642 1.90164 0.515878 1.52085 1.72053 0.000873836 0.927461 1.46701 2.7898 2.09258 1.17208 0.699968 0.32134 0.471144 1.50069 1.73638 1.46505 0.790989 0.00106247
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001565 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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