TCONS_00001529 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001529
Unique NameTCONS_00001529
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length64

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001529 ID=TCONS_00001529|Name=TCONS_00001529|organism=Clytia hemisphaerica|type=transcript|length=64bp
CTTCAGAAATCGTTGAAATTACCACAACTGAAGTCGTTGTAGTGGAATCT
AACGAAACAAAATC
Run BLAST on NCBI

transcript from alignment at sc0000010:414449..414512

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001529 ID=TCONS_00001529|Name=TCONS_00001529|organism=Clytia hemisphaerica|type=transcript|length=64bp|location=Sequence derived from alignment at sc0000010:414449..414512 (Clytia hemisphaerica)
GATTTTGTTTCGTTAGATTCCACTACAACGACTTCAGTTGTGGTAATTTC
AACGATTTCTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000788XLOC_000788Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001529-exon-sc0000010-1491911889:414449..414512TCONS_00001529-exon-sc0000010-1491911889:414449..414512Clytia hemisphaericaexon
TCONS_00001529-exon-sc0000010-1510915933:414449..414512TCONS_00001529-exon-sc0000010-1510915933:414449..414512Clytia hemisphaericaexon
TCONS_00001529-exon-sc0000010-1575043694:414449..414512TCONS_00001529-exon-sc0000010-1575043694:414449..414512Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:414449..414512 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001529 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top