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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001488 ID=TCONS_00001488|Name=TCONS_00001488|organism=Clytia hemisphaerica|type=transcript|length=964bp
CGGCAAACCGACAATTTTACGACAATTGGTTACTAAGATTTTTCTTGACC
ATCcaagatatttttaaagatttctctACAAAAACTGTTTACCAATCAAG
AATTTTTGCTGAATGATCTTGTGGAATGTTTGAACTACACAAAACATATC
AAGAGAGAGAAGAAGCATGCTTATGAGATGAGATTTGGCGAAGAAAAGTT
GAAGgataattttttctttacattttaGGGGGTCTTATTTAAAGTTAGGT
AGCTACTCGtggaattttcgaaatataATGTGTGCATCGTTATGAAAAGT
ATAGAAGTGTGGCTTTCTTGTGGTACATAGATCTTTTGCATACATATAGG
ATTTAAATTCTAGTAGAGCACTTAAAATTCTGAATTTTCGGTTTGAAAAC
TTCCGAGAATTTGTcctccattttgttttttacagcAAGAAAGTAATATA
CATCATGTAATACCGTAGAAAACAAAACGTCAGCTTTGGAAAGAGAACAC
AGGAAAAATTGGATGATTCATGTATGAGTGTGTGGAAAGAAAGTTGTATT
TGATTACAAAACAGTATTTCTTCAACATTTTGGAATCAGATTTGAATAGC
TACACACAagGTCAATCCCAACAAAGTTTGTATTTGCCTGCAACTTTTGG
CTGTCACTGTCACGTTCTCCACACCAAAGCATCATGTACCATCTGTAATG
GAGCTTGATTGTGGTAAAGGAAGGAAGAATGATGGAAAAATTTAATAGAA
AACGTTGAATGAAGTAATGCTGTGACtgtcgaaaaattttataaCATACC
ATGCATAACCTGTCAAGAAATAACTTATTGAACAACTTGGAACAATAATC
ATGTACAACCTGCTATTGATTTAACATTGAAATTTAATGAGGATTTCTCA
TGGGAAATGTTTGTACAGGCCTGTACATGGTCAGGAGTACTCAACAATTT
TGGTTTACTGTCNN Run BLAST on NCBI transcript from alignment at sc0000010:486691..487885- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001488 ID=TCONS_00001488|Name=TCONS_00001488|organism=Clytia hemisphaerica|type=transcript|length=1195bp|location=Sequence derived from alignment at sc0000010:486691..487885- (Clytia hemisphaerica)
CGGCAAACCGACAATTTTACGACAATTGGTTACTAAGATTTTTCTTGACC
ATCCAAGATATTTTTAAAGATTTCTCTACAAAAACTGTTTACCAATCAAG
AATTTTTGCTGAATGATCTTGTGGAATGTTTGAACTACACAAAACATATC
AAGAGAGAGAAGAAGCATGCTTATGAGATGAGATTTGGCGAAGAAAAGTT
GAAGGATAATTTTTTCTTTACATTTTAGGGGGTCTTATTTAAAGTTAGGT
AGCTACTCGTGGAATTTTCGAAATATAATGTGTGCATCGTTATGAAAAGT
ATAGAAGTGTGGCTTTCTTGTGGTACATAGATCTTTTGCATACATATAGG
ATTTAAATTCTAGTAGAGCACTTAAAATTCTGAATTTTCGGTTTGAAAAC
TTCCGAGAATTTGTCCTCCATTTTGTTTTTTACAGCAAGAAAGTAATATA
CATCATGTAATACCGTAGAAAACAAAACGTCAGCTTTGGAAAGAGAACAC
AGGAAAAATTGGATGATTCATGTATGAGTGTGTGGAAAGAAAGTTGTATT
TGATTACAAAACAGTATTTCTTCAACATTTTGGAATCAGATTTGAATAGC
TACACACAAGGTAAATTATGTTTTTTAAAGAGTCTCCCTACTGTATTCCT
GGCTATTTTTTGTAAGCCAGAGAGGGTATTATGTTTTCAGTTTTTCTTTG
GGATGGCAAGAATTGACCAAAAGGGAGTTATACTCTGTTATACTGTTGGT
TCATGAGTATCTTTTAATTTGTCAGAGAAAATTTTCATCACCTTTCTTCA
AGTCGCTTAGCTATTAAAATTTTATTTCTTTCATTATCTAGGTCAATCCC
AACAAAGTTTGTATTTGCCTGCAACTTTTGGCTGTCACTGTCACGTTCTC
CACACCAAAGCATCATGTACCATCTGTAATGGAGCTTGATTGTGGTAAAG
GAAGGAAGAATGATGGAAAAATTTAATAGAAAACGTTGAATGAAGTAATG
CTGTGACTGTCGAAAAATTTTATAACATACCATGCATAACCTGTCAAGAA
ATAACTTATTGAACAACTTGGAACAATAATCATGTACAACCTGCTATTGA
TTTAACATTGAAATTTAATGAGGATTTCTCATGGGAAATGTTTGTACAGG
CCTGTACATGGTCAGGAGTACTCAACAATTTTGGTTTACTGTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001488-exon-sc0000010-1575043694:487276..487885 | TCONS_00001488-exon-sc0000010-1575043694:487276..487885 | Clytia hemisphaerica | exon |
| TCONS_00001488-exon-sc0000010-1575043694:486691..487044 | TCONS_00001488-exon-sc0000010-1575043694:486691..487044 | Clytia hemisphaerica | exon |
| TCONS_00001488-exon-sc0000010-1510915933:487276..487885 | TCONS_00001488-exon-sc0000010-1510915933:487276..487885 | Clytia hemisphaerica | exon |
| TCONS_00001488-exon-sc0000010-1510915933:486691..487044 | TCONS_00001488-exon-sc0000010-1510915933:486691..487044 | Clytia hemisphaerica | exon |
| TCONS_00001488-exon-sc0000010-1491911889:487276..487885 | TCONS_00001488-exon-sc0000010-1491911889:487276..487885 | Clytia hemisphaerica | exon |
| TCONS_00001488-exon-sc0000010-1491911889:486691..487044 | TCONS_00001488-exon-sc0000010-1491911889:486691..487044 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010 | supercontig | sc0000010:486691..487885 - |
Blast
The following BLAST results are available for this feature:
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