TCONS_00001465 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001465
Unique NameTCONS_00001465
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001465 ID=TCONS_00001465|Name=TCONS_00001465|organism=Clytia hemisphaerica|type=transcript|length=3152bp
tctttgtttggttAAAAATCTTACAGTATTAAAGAAAcaacttttccaaa
aaagaatttatttttattggttTTTATTTCGTCTTTGTCATACAACTAAT
CACGGGACTGCAGACAATACCTGACTTGACAAATTAGTTTAATCTCCATA
AAGTCGGGTTTGATTACTCACCATACAAAAGGACTTACTGGAGATTTTAT
TTCGTCATTGCAATAAAACTTTATCATGAATACAATAGATGATGGTAATG
ATACGTTTAGTCAAATGTTGAATTACCCCGATTACCAGGAACTCGAGGAA
TATAAATTACCTGATGATGGTTTTTTTGATATAGTGACTATACAAGAAGA
ACCAGAGGACCAGCCCTCTGAATATCAAAACCAACCTATATATTTAAACA
TCACATCTAAGAGAGATAGTATACAACACTATAGCTTACCAAAGATGAGT
GTTGTTTTGAACGCCAATACCGAGGGCGTTTTTCGCACTAATTATGGCGG
TGGTGTTGGATCAGATTTGGTGATCCATAACAAGGAATCAAGATCAGATT
CGATTAACAGTCAGGGTGGTAAACGTAAAGCGCCACCCAAACCGCCCCGC
TTGTCAAGATCTGATTCGTCTAATAGCAGTGGTAGTGGTGGGCGTGGTTC
GAGCCGAGGGAACAGTTTCTCGTTCCCAAACCCTCCATCATCACTCGAAA
GAAATCAGTATTTGAATTGTGAGCCGGACGAACACGGAAAAGGTATGGAC
GATATCATCGATTCGTATAAAAAGAATCGGGAAAGTTTACACGATACAAA
CGAAAACATCGTACTTCATAATGGGCACGAGAGCGATCAATATATGTGGG
TCCCGGCTGGACTAGACGCTAATCTAATCGAAGATTACATGGCTTCTCTA
CCACGTCACAAAGTTCCACATTTCAAGAATCCTGATGGCATCTCTTACCA
TAACAAACAACTTATCCAACAAATACCTCTACAAGATTCCAATTTCGAAA
ACATCTCCACTCTCGAAGATGATGAACGACAAATTTTTAACGGATTTAAA
AGAGAACGTGACTCCCAAATGGATTCGGGCAAAGTCATAGTGGCAGATGA
TAATTATGTCTGTCGAAAATGCGGAAAAGAAATCTACCAAGATGATTTAC
TAGTCAGGGCTTCAGCCCTCGGAGAAGAAGCTGTCTGGCATCCAGGCTGT
TTCGAATGTTGTAAATGCAACGAGCTGTTAGCAGATCTTATTTACTGCTA
CAAGGATGGTGATATTTTTTGCGTCCGCCATTTTGGAGAAGAGTTGAAAC
CAAGATGCTGTATGTGTGACGAGCTCATTTTCAACGGCGAATACGTGCGT
ACGGACGAGAAAGCATACCACGCTCAACATTTCGTGTGTCATATctgtga
atgtagtttaacagGAGAACAACATCTAGTTGACGATGGACTGCCCATCT
GCATTGCTTGTTATGATGATAAATTTGCATCGGTTTGCCACAAGTGCAAC
AAATCTATCGGTGTTGACGAAGAGGATGTCATTTACGATGACGAACATTG
GCATGATTACTGTTTAGTTTGTAGTCTTTGCAATTGCCGGTTAAGCGGTA
CAAGTTTTGTTATTCGTGATGACAATTTCTTATGCTCGGATTGCTACCAA
AAGACTGATGACAAAAGATGTAAAACGTGCGGCAAAGGATTTGAACCGGG
TGCCAAAAGgtTGGAACTGAAAGGAGAATTTTGGCATGACACGTGTTTCG
TATGTGATATCTGCAAGTCACCTATCACGTCCAAGAAATTCATTCAACAC
GAAGGATCACAAGTTTGTTGTCCGTGTTTCGATCAGAAATTCGCGAAACG
TTGCGCGAAATGTGAAGAGGTTTTACGCGAGGGAGGTGTAGCTTGCGGTG
GAGCTTTCTATCACCGTGATTGCTTCCAATGCGAGATTTGTAACGCGTCC
ATCGCTAATCAAGCTTTCCAACAGAAAGACGGATTCCGTTACTGCATGCC
GTGTTACAAACAACAGTACGCCAAACGTTGCGCCGGTTGTGATAGTTATA
TAGTGAACGGAGAGTACTATACTGTCGATTCAGATAGCTGGCATAAAGAG
TGTTTCAAATGTGAAGTTTGTCATATTGTTCTCCAACAACAAACGTTTGT
TCAAGAGAATGGTAAAGTTAAATTGGTATGTGAAAGCTGTCTTTAAACAA
AGAAGTGCGTTGTGGAATGTACCCTCTTCTTTGATTGGCTGTTGTAGAAG
GGCCTACCAAGTGCCGAAAAGAGAAGCTTTTGAATTCAACAAGGGTTTCA
TGGAGCTGATGGGTCTTGTGCATTCATAAGATCTACCTACAACGCTGTAA
AAAAGACTCTGTCGATTAAACCTAAGAACGCATTTATTATGAAAGAAGCC
GCATAAAAAGAAAGGAATATTTGGTATAGACAGACAAACTCATGAAGCAT
TATGGGAATGTTCTATGCGTTTAATCAATCCTGattcaaaaagtgaagaa
gtCAGGCATTGAAACTTACAAAATGAACCTTGCTTActtataaagtaaaa
aaaaagtaataccTTGAAGAAGTTTGACAAAATTGTAAATGAATAATGAA
CTGGAAAATTTCACATTCATATTTCTCAAatggaagaaaaagaaattaac
tATTTTGTATTAAAGGTTTTAATAGTATCATTAGTTgtcaattaattaat
taattatgtTTTTGTTTAACTAAAATGGTGCAGTCAGATGCTCAGGGAAT
ATATTCCTTAGTTTCTGTTAACTTGATTGTAAACTATCAAGGATGTAATC
GTAACTTCGGCATAGGCACCATAAACCTTGGGTTATCTGACTGTATTTTG
CTTTTAACTGCACTTTTTCTGTTAATTTTCTTATTACTTCACTTTAGATT
CTTTAGAGTTTAAAAGTTTGAGGGAAGGGGTTTCGGGGTTGTTGCAACCC
ATATTCAcacattgtttttattattcCACATGATACACtttcaattaatt
tattttGTGTTATCGTTAAATTATTTCGgttgtatttaattttttttttt
tttgcttttacattttttttacatcTCTAACAATAAAATTCTCTATTCTT
CTAAATCGGAAATGATAAAAATTCGATTAAAATTATCTGGATTTGTTGCA
AC
Run BLAST on NCBI

transcript from alignment at sc0000010:371541..384296-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001465 ID=TCONS_00001465|Name=TCONS_00001465|organism=Clytia hemisphaerica|type=transcript|length=12756bp|location=Sequence derived from alignment at sc0000010:371541..384296- (Clytia hemisphaerica)
TCTTTGTTTGGTTAAAAATCTTACAGTATTAAAGAAACAACTTTTCCAAA
AAAGAATTTATTTTTATTGGTTTTTATTTCGTCTTTGTCATACAACTAAT
CACGGGACTGCAGACAATACCTGACTTGACAAATTAGTTTAATCTCCATA
AAGTCGGGTTTGATTACTCACCATACAAAAGGACTTACTGGAGATTTTAT
TTCGTCATTGCAATAAAACTTTATCATGAATACAATAGATGATGGTAATG
ATACGTTTAGTCAAATGTTGAATTACCCCGATTACCAGGAACTCGAGGAA
TATAAATTACCTGATGATGGTTTTTTTGATATAGTGACTATACAAGAAGA
ACCAGAGGACCAGCCCTCTGAATATCAAAACCAACCTATATATTTAAACA
TCACATCTAAGAGAGATAGTATACAACACTATAGCTTACCAAAGATGAGT
GTTGTTTTGAACGCCAATACCGAGGGCGTTTTTCGCACTAATTATGGCGG
TGGTGTTGGATCAGATTTGGTGATCCATAACAAGGAATCAAGATCAGATT
CGATTAACAGTCAGGGTGGTAAACGTAAAGCGCCACCCAAACCGCCCCGC
TTGTCAAGATCTGATTCGTCTAATAGCAGTGGTAGTGGTGGGCGTGGTTC
GAGCCGAGGGAACAGTTTCTCGTTCCCAAACCCTCCATCATCACTCGAAA
GGTAAGTATCATGTTCTCTCTTAATTCAATTATTGTTTTCGTTTGTCGAT
GGCCTCACATTTTACTTTAAAGTGGTATTTAGAAACCGATATAGTTGGTT
ACTTTTCTTTAAATTCTCATAGAACAAGAAACCTCCATTTATAGGTTTGT
TACGTCTGCTAGAAATGTGACCATAGTGCAGTGGTAGAGCATCCGGCTAC
GGTTCGCAAGGTTGTGTGTTCAAATCCCAGCCGGGTCATAACAAGATTCC
CAAAATGATACTTGATGCCTCTCTGCTTGATGCTCCCCTACCTTCGGGTA
GATAACTATCGAAAGAGGATCCTTTGGGTCGCCTCCGACTGTGGTCGCAG
ACTTACTTACTAGAAATGTCTGGATTTAGGCCAAAGTCTGGAAAGTCTGG
AAAGAGTCTAGAATTGGCATACCTGTCTGGAAAACATATGGAATTGGAAA
CATATTAGATTTACATTTTTCCGAACTGATAACTTTGCAGATTTTTGCAT
CTTTTCTTTCTTACAGCTTGCATTGGGTTTATTATTGCAAATCTTTCGCC
ATTTTTAGCCAACTAAGGCCGACTTGCTCGATTAAACATGAATTACTGTA
TCAGCGTTCTGATATAAGTTGGAGGGTATTCTTCATTATATTCTCAACAA
TTCGGTTGAGTGTCTGTCCGACTGTTCAACATTTTTGGGGGTAACCCGAA
GTGACTGAAGATTTTCACATTTGCTACCAGGTTGTTCTTATTTCTCCTTT
TTTTTTATTGTAAGGACTTAAAGGGACAGTTCTTTTATCGAAATAAAGCT
AAATTTTTGGGGTCGCCTAAAGAAAAGTCCCACTATGTCATATGGTTAAT
GTAGTGTATTCAAGCACACTCGAACACGCTGTTTCTTCTTCGATGCAATC
ATTTTGCTTTGGTTTTCTTGTGCAATTTTTGTCCTTTCTCTCTCCATTTA
AAAAGTCACCCAACCAAATGTTACGGGATCGGTTGGCATCAATTTCAAAA
AAATGAGAATATCTTTTTTAAACCAATCAAATTAAAGCCTAAAGGGTAAT
CGTTTGTAGCTTAATAAAGTAAAAAAAATGAGATTCATTAAAACGATATC
ATCTCTTATTCTTTTGTATTGAAATTCAATTCCATTAAAATAGGGATTGA
TTGAGAGAGGTAAGAAGACAATTTAAATTCATTTGATGAAATTTCAATTA
AGATTACCTTAGTAACCGACCCAACTTTGCTGTCAATCTCTCAATTTTCT
ATATCTCATTTTTGATTGAAATCAAGTGTATTTGTAAAAACTAATTCATG
TGTTTTTGTTGTTGATGAGCGTGTTTTGAAAGCAGAAAAAGGGGGTAAAC
GATCCCACTGCCAGGCGTGTGGTAAGATAATTGAACAGCAAAGTCTATGG
TAAAGATTTTACAACGCAGTAATAGTCGTAAAATAAAGGTAAACTTTTTG
AAATTGTAACTCTGTGGAGAATGGTTTTCTTCGACATTAGTGTTCCAGGA
GAAGGTAGATAATCTTGTTCAACACCTTTCTTACTACAATTATGGACAGA
AATATTTGAGACAAACACTAGAAGTTACTTCAGAGATCCCTCTTTTTCCC
AAACTGCAATGTTCAGTGTGCGGTCGTCCCACCATTCATTGAACTTTGCA
AATGGGGGGGGGGGGGGGGAAGAGCTGGGAGTTTAATTTTTTTCTCCTAA
TTTTTGTCCATGATTTTTACCCCTACTACAACACATTTCACATTTTTTTT
TTTTAAATGTTCAAAGAAAGTGATCAATACAATCATGGTCGAAATATATT
GAGATTTTAGTGTATTTTAACGTTTTTCACAATTTAAAGTTCGGGTGAGA
ACTGCTAGTTCCAAGCCTTATTAAAGCAAATTTGAGCTTTTAAATCCTGA
GATCACACTTTCCAGCTGTAGTTGAACGTGTAGTTTTTAGTTCTCAGTGC
ATTGAGATATTGTTTTCAGCAAAGACTTTGAGACTTTGAGCCTTTGAGCC
ATTTGGGTTTAACTAAGATTGCTACGTATAGCTTTCGAGCTTGAATATCC
ATGCTAGTTCAAATGTAACGGGATTCAGGGTCATCCTTTTTGTTTACGTT
TCTAAGGGACGCGCAATATTATATTGACATTTAATAAGTCAGTAAGATGG
GAGTTCATTTTTTTGTACGTGAACTTTTTGTTTCTCTTTGATACTCATTC
GCTGATGTGTTTTTTTTGATGAATCAAAAAAATCAAATAAAAAAAGTCCT
TGAAAAGCTCTTAAACTTAAAAAAACTTTTATATTCAGTTAGATCTAACG
TCTACTTGATTTTCCTTTTGAGCTTAATTCGTCGGACATAGTAAATTCAA
TTCCCTTTGATGAGAACATAGATAAAATGTTTTTGTTTTCACTTGGGCTA
GTTAGTAGCTAGTAGCAGTACGTTTTAAGTTGGTTGGTCGGTCGGTCGTG
TGCAAAATTGTTTTTTGTCAAATTTTCTGTGTTTTGTGTTGACAAGACGG
GGTCGATTTTTTTGATAAAATTTCAAACAACCTTTTACAAGCTTAATATG
TAAATAAAAGAAAATACTGATCTCTCATTCTCTTTAGCTTTATTAAAAAC
TTTCTATGTGAAGCTCTTAAACTTTTTCGTCCTCTAGGAATCTTGTAAAA
AGCGATAAAGGGTTGTTGTATGTTGTCGTCTTTAGGTGATTTATCTGGTA
AGTTTTGGTAAAAATCTTGAACGAGGAGAAATTGATTAAGGAAAGTCTTT
TAGTTTTCTTTCGATTTTGAATTATTTTTCGACTAAATCCTAAAGTAGTA
CATAGCGTCAGCCCCCCCCTTTAACTGGATCAATTTTATGAAAGTGTCTA
GGGTCAAAAGTCCTGGGGGCTAACGAAAAATTCATAAATCTTTGGGGGAC
TTAAAATTCAGGGGGGACCTAATTTTTGCCTGGGACCTAAACCCAGGCTG
ACGCTATGTAGTAGCGTGGTGGCAGGGGACAGGGGGCAGTGACAGCTTAG
ATAATGGCAATTTTCGACCAAAAATAGAGAAAAAAAACCACAAGTCTTGC
AAAAGCCAATTAGTACTAGTACTTCATTTAATACCTTCTGAAACTGAAAA
TGAACCCCGTATGGGAAAGGGTGAAAGATTTTGAAACTTCCCAAATATAG
CAAATATATATGACTCAACTCTTTGAGAGATTTAGAATATTTTTCATAAT
ATTTTTCAAAGTTTCTTCTTATTCCTTTATACGCTGCCTGACCGCATTCA
TATATATTCTTTATAAGGAATTCCCTTGATTCCAAGGGGAGAGGTAAAAT
AATCTCTTTCGTATGTTCTAATTAAGCCTTATGGTATCACTGTTCAAGGG
TTACATCAAATGAACAAAGCCCTACGATACTCGCCAATACCCAGCTGGCG
CACAACGTTGTTTCGACGTTCATCTAAACTATATGCACGTTTTGAACGTT
GGATGAACGTTAAAATAACGTTGTGTGCAAGCTGAGCAGCTGTTAACCCA
CCCATGCTAAGAGGGTGTTTTCACTTGAAATCAAGCCAAAGTGAAGAAAA
ACACGAACAGGGCGAGAACTAGCATCTCATTGCCTTATATGTAGTTATCG
AATTTATTATGCATTTTCAAATTTTGATATATAAACGTACTACTGACTTT
AGACTTGTAAATTTCAGTCAAAAACGGTAAGAACTAGTAAGATAATTTTC
ATTAACATTCTTAGAAGGCCAATAAAAATTGTTGCCTTTTGCACGTACTT
TAAGGAACACAAGTTGAAGAGTCCACACATCATATATTGTATGGTAGGTT
ATGATAGGTTACTTGTTAAGCCAACTCTACTTAAGATTGCCTTTGATCGA
GTTCAGATACATAGGAAAAATGTAATCGGAAATGTCTCTTGGGGTTCAGT
TTATAGTGTCAACGTATCCACATTCTCCGATGCTGACTTCATTGATACAG
TTGACGCATTCTAATTCGATTTTTAAGGGGAATAGGATTGTCATCGAATA
AGGGAGCGTATTGAATAGTAGAACGTCAAGTTAGAGAGCGTCAACTGTAG
GTATTCATTGAATTCCAAGCCCGAAAGGCTAGACTCGAGACTCTTGGATG
GGAAATGCAACCACTTATTTCCCATCCAGAACACCCGCGCGCTTACACAA
ACGCCGGATTAAAACTAAAATCTATTCCAGCGATTTCAGAAAATGCAGTC
CTCAAAAACAAAGGAACCGCTAGATACCATCCGTCGTCATTATTACGGCG
CCTTCTAGGCGCGTTTTGGATAAGAAATAAGTGGCTTCACTTTTTCTTGC
CTAGGATTCTACTCTAGCCCTTCGGGCTTTAAACTCAATGGGTATATTCC
TTCAACAAAAAATATTACAAAAGCTTATACCTTGGGTTATTAAACAATAA
CAAAAAAATCTGTCTGAAGGCAAAACATGTCCTACAAACTTTTATCAATG
CAAATTTTTTACTCACGTTGAAAAAAAATGTCTTATCTCGTCCTGAAGGC
GGACATGACAAATAGAGTATTTGGAAATGACTGTAATCTCATTGACGTCA
CGCATGCATCATTGTTAGAGTCAGCAGCGGAGTCATGCGCTCGCTTCATT
CTTTACATTGTTATGTTAGTGTTTATCGTTATTGTTTCCAATTTCTGTTA
TAACCAAACATGGATATATCCGTCTCAAACTGAATCGTTCTTTTTAGCGA
GGGATCGGAAATAAGGTATTAATTACAGAAAATTACTCTCGTTCCTAACA
ACCGTCTTTTACCAATTTGGATATTTTCTTTTCTTTTCTTTTTTGACTAT
CTCTTGTTGAAGAGTGATTTCGTTGGTTTTGATATCAGAGGTGAATGGTC
GTAAATTTTTTTTTGCCAGACGAACGAAGTACTGTATATGCCCTTAAAGT
GCTATGATCTCTAATTTTATCGAGAAATATTTGTTTGGATTGTGTGTAGT
ATATACTGCAAAGTGTAATGTTTTTGTTTTTGTTTTGGCGTGCCACTCAA
AGGCTTAATAAAAAATCTTATAATGTGATTCCTTACACATTCTTAAACCG
TTTTATTTATCTTTTCTAGTGTAGTGTAGTGGGTGAGTTTCGATGTTAAC
AAAAATCCTGTGAGAAAACTTTCAAGTTAAAGCGTTTTTTGTTGTTTTCG
GCTAATTCAACTTTATATTACAAGCTTTCATTTTCGTCATTTTTACGTTC
TCGCAATTTTTGATATAGTTGTTATGACTTTAGTTTGAAACAAGAGAGAC
AAAAACTAGAAATATAATAGTTCTATNTGTTATGACTTTAGTTTGAAACA
AGAGAGACAAAAACTAGAAATATATTAGTTCTATATTGTTCTTGTTTTGT
CTTTTCAAATGATCTGGTCTGCCATCCACCAGCTTCTACATTTTTAAAGA
CTTTCTAGAAAAACTAAATAGAATTTGAAGTAACTTTTGCAAATAGTAAT
TCGTAAAAATACTTTTTTCGGGTTTCTTTACTTTTGCTGCTCAGAACTTT
TTGGAAGCATTATACCTTATAGTTGTTAAGAAGTTTTTATAATCTTACTT
GCTTTTTAATCAAAACAAAGTTAATTCCATTCAAGTACTTATTTTGAGAG
TTCAGTGAGGATTTTAACGTCTTGTTATCTGATGTGATGCACACATATTT
AGGTTTTTCTTGTTTAAAATTCTTTCCTTATATCCTTATTTGGACTTTAT
TGAAATTGCGAGGAGTTGATTTACTACGTCTATTTGGATTTATCTGAAAC
TCGGAGAGATAAGATTTCTCTTGTTTCTCTGTTAAGCAATTGAGAAATTG
GAGTAGGCTTTCAAAAAGATTTTATCTTCANCTGTTTCTCTGTTAACCAA
TTGAGAAATTGGAGTAGGCTTTTAAAAAGGTTTTATCTTCATAACGGTTT
CACTGCTTTTTTATTTCTTAAGATTTTCATTTAACTGTCTGAACAATCTA
CAACCACAATTTTTTCGGTTATTCTGTGTCTTTTTGGAAGATTTTAAAAA
GAAAAATTTTTTAATGCTAATTCAAATTACTATCATTGACAGAACTGGCG
TCCATCGCAACCTTCGACTAGTGGGAGACGGTGGATAAAAAGCTCTGTCC
AAGATTATAGATTAAACTTTTTTAACAGGTGTATGTACTAAAAACTTTTC
TCTCCATTTTCTCTCTTCAGAAATCAGTATTTGAATTGTGAGCCGGACGA
ACACGGAAAAGGTATGGACGATATCATCGATTCGTATAAAAAGAATCGGG
AAAGTTTACACGATACAAACGAAAACATCGTACTTCATAATGGGCACGAG
AGCGATCAATATATGTGGGTCCCGGCTGGACTAGACGCTAATCTAGTACG
TAAACCTTTTTATTGATTCTGGTTTTCTTACTTATCAAAATATTGAGCTT
CTCACTATTTTTAATAGGCGAGTTTATGTATCGGAGGATATCGAGGGCGA
CGGTAAGTGAAGTCGACGCAAAACAAAGTCGATAGTTGGTATACAGCTCT
ATATCGCCTTTACTCACCTAAACAGACGACGGTATTATGGGTGTTTTTAC
CGTTGTCGAGTAAAATGGACTTTGCTTTATATCGTCTCCTAGAATTTATC
TCACACTAATTCGCTATTAAGTGACATCAGGCCTTTGGATCTGCTAGTTT
CGAAATCTTGACGAAACACTGTGGTCTAAGATTAAGGTCTGTAGCCTAGA
AAAAAATAGGATATCTCTTATATCTAGCATTCTAGTCTATCTGAAGTATG
TTTGTAACAGCGGATATATCAAATCGCTTTGCTAAGCATGATTTTCATAC
TATTTCTGGCCATGTTTTTTTGAAAACGACTTCCACATTTTGAAGTTCCT
GATCCTGTTTTTGTTTTTGTTTTGAATTCCGAGGCTTATGATGTGAGGTC
CTCATAACCACGTGCGTTTACAATAGGATATTATTGGTGGTCGATAGTTT
ACGTCGAAACTCTCCCGGCTATTGACTTTCAAACTCAACATAGTATTTTC
ATACGCAGACCATTTTATTTACCAGTGAACCTTGTTATTTCGGAGAAAAC
TATCCAAGGTTCTAACATTTACTTAAAGATTAATGCAATAAACTAAAATT
ATTCTAAAAAAATCTATTTTCACCTTTAAACAGATCGAAGATTACATGGC
TTCTCTACCACGTCACAAAGTTCCACATTTCAAGAATCCTGATGGCATCT
CTTACCATAACAAACAACTTATCCAACAAATACCTCTACAAGATTCCAAT
TTCGAAAACATCTCCACTCTCGAAGATGATGAACGACAAATTTTTAACGG
ATTTAAAAGAGAACGTGACTCCCAAATGGATTCGGGCAAAGTCATAGTGG
CAGATGATAATTATGTAAGCTTAAAGTTTGGTTTCATACAGTTAAAACCT
TCTTCTTGTCATTTACCCTAAAGTTTTCATAATGCATTTTTATTTCAGTC
TTTTACCTTTCAGCCTTTCGATTTTAACTGACTTGACAGAAAGTTATTGT
AGATGGTGAATAAGATGATCATTTTGTTATTATTGAATCCTTATTAGGTC
TGTCGAAAATGCGGAAAAGAAATCTACCAAGATGATTTACTAGTCAGGGC
TTCAGCCCTCGGAGAAGAAGCTGTCTGGCATCCAGGCTGTTTCGAATGTT
GTAAATGCAACGAGCTGTTAGCAGATCTTATTTACTGCTACAAGGATGGT
GATATTTTTTGCGTCCGCCATTTTGGAGAAGAGTTGAAACCAAGATGCTG
TATGTGTGACGAGGTTGGTCATTGTTCGCTTTTCACTGTTCATTTTACAC
GCGAGGAATCGGATTTTCATAAATTACCTCGCGAGCAACGCTTACCTCGT
TTTAAAGAATTGCTATGGTAATTGTTTCCCGGAGGAGTTCATAAGAAGTC
TAAAACGAGGCAGTCGTTGTACTCGAAATAATTCATGAAAAAGGTCTATT
TATTTCTCGTGAACCCGTGCTTTGAAGGTAAAAGTGAGAATAATATGTAG
TACTCTCAGGTACCTAACAAACGGGAAGGAGCTGGGAAAATTCTTCGAAA
TTCAATAAAGGGGGGAGGTGGTACCTCATTGTGGGGGGGGGGGGGACCTA
ATTTCCGGGGGTTTGAAATTGTACATCTAAGTTCCCCAAATATTTTCAAA
TTTAATTTAAGGGGGTCCTAATAAGGTCCTGGGGAAAATTATCGAAAAAT
GAACGAAAAAATTAACAAGCGGGGAAGCGTTTATGATGCACATAAGTAGT
AATGTGAAAAAGAGTATCACTTTTTTTCTGAAGCAAATAAAAATGTTTCA
ATTAAACGTTGATCTAGTATAATACGGTATCAAATTACTTTCCGGCAGCC
TGTCTATAATAGGCGGCCGCCTATCTTACCGTTTCTGGTCTGAAATTTAT
TTTCAAATCGTAGGTAGCCGCTCTTTATAATGAAATTTCAGGCGGCTGCT
TCACTTTACTCAGGCGGCCGCCTAATTTTAATTCGCATCTTCGACATGAA
AAAACAAACAAAATGGCTTCAACGAATTTAGAGGTACAAAGATGCTCCTG
TCTTTGACTTCAATAAGGTAAACTAAACGTTTTTATTGTTTTATTTTTCT
AATGGAAGGAGAGACCGGAATCTTTTCCTTATTCTTCAGCTCAACAGCAT
TGAAAATGCTGAATCCTGCTGCAAAGAAGAAAAAAAAAGTTACTGTGCAG
TGAAGGTGAAGCGAGGGATCAGCTGTTGCACAGCAAAAAGTTACCATTTT
GTTAGATTTCGACAGGCGGCCGCCTGGGTTGAGACAACAAAATAACAGAC
CAGAATATTATCAAGATAGGCGGCCACCTTACCTAAAACGTTAAGTCAGG
CGGCCGCTTAAGATTTCAGGCAGCCGCCTGACCTTTACTGCCCATCCAAG
ATAGGGACAGGGTTGGCCATATCAGCCACGGTATTATTCTTTTGCGGTCG
GTCCATCTGTTATTGTTTGTAATGACCTCTTAAATAGTGTTTTTGAAATT
AAGGATTCAAAAATAATTTGATTCTCGTGTATAAACTAATGGGCTAAATT
AAGATTATGACTACATATGTCGTAATTTCTCATAAATCTGATAATCATTT
CGTTATATAGTTGAGCTTTTCAAATCCTTTGTCCCTTTTTCCCAAATGAT
ATTAATGCTCTACTCTACTACGTTTATAGCAATTTTCAAGAATAGAGCAA
TGGCTTGGTAATAAAAGATGACCAAGACCATTTAAAAATTTAGGATATCT
CTAAGAGCGTCAAATTTTTCCTTTTTTTTAGTTTTTAGTTTTGATTTTTG
GCCCAAATATACCTGTCACAAAGTACTAAACCCCATCCCCTAGGGATAGC
ATTATTACAACAGGAAGTTGAAAACAATCCAACATTTAAAAATTTATTTT
CTCATTCCAGCTCATTTTCAACGGCGAATACGTGCGTACGGACGAGAAAG
CATACCACGCTCAACATTTCGTGTGTCATATCTGTGAATGTAGTTTAACA
GGAGAACAACATCTAGTTGACGATGGACTGCCCATCTGCATTGCTTGTTA
TGATGATAAATTTGCATCGGTTTGCCACAAGTGCAACAAATCTATCGGTA
AGATTCTCAGTTTGGTAAAAGTGGCTAAAAATATATTAGCTTTTTTTTTT
CCTTTTTGTATTGACTGGTTGGGACAACTTGATTTTTTTTTACTTTTCTT
GTGATTTAGTTGATCATGCCCAACAATGACATTGTTTCATTGACAAATTT
TTTTAAATATATTTCATAAAATGCTAGGCACTTATAGCGGTGACAGGAAA
ACTGCCTGCCTAAATTCACCCTCTAAAATTACCTAAAGTCTACTGATCGT
TATGTTTTCATTTCTGGTTGACAGTCCACACTGGGCTTTGAATGTTTCGA
AATGCAAGCATTCGCTACATTGTAGTCGTAGTTATGGAATAAACTTTATA
TAACTCCATAACTCGAACATACAGGGAACACAGTTATTTCAAGTTAAGGA
GGTTCGAGTTACAGATATCCCAATGTATTATGGAAGAGGGTATTTAGCGC
AGATATCATAAAACAACTTTTCTTTTTCATTCAAACAGGTGTTGACGAAG
AGGATGTCATTTACGATGACGAACATTGGCATGATTACTGTTTAGTTTGT
AGTCTTTGCAATTGCCGGTTAAGCGGTACAAGTTTTGTTATTCGTGATGA
CAATTTCTTATGCTCGGATTGCTACCAAAAGACTGATGACAAAAGATGTA
AAACGTGCGGCAAAGGATTTGAACCGGGTGCCAAAAGGTTTGTAAAGTTT
TTGTGACAGCGTAACCTATGCTTATTTTTTCATTCGGGTCGGAGATAAGA
TTTGGCGAACCAAAAATGTCGAAAAAATTTTCGGATTTATTATTTTAGCG
AATCTGCGTTTAAAAAAAAAAATCCCAGATTTCGCGACTCGTTAATTTCG
TTAACAAAGGCCCTTAAACCGCCAATTTTCGTCAAAATTAGTAGATTCAC
AGTGTATTTTATACCGAAAATCTTTTTTCGCGAGTTAACGATTCCAGGTG
ATTACTAAATAAATTCGAAAGCTTTAAATTTGTTTACACTTTCTTACTCT
TTTAAATTTTCAGGTTGGAACTGAAAGGAGAATTTTGGCATGACACGTGT
TTCGTATGTGATATCTGCAAGTCACCTATCACGTCCAAGAAATTCATTCA
ACACGAAGGATCACAAGTTTGTTGTCCGTGTTTCGATCAGAAATTCGCGA
AACGTTGCGCGAAATGTGAAGAGGTTTTACGCGAGGGAGGTGTAGCTTGC
GGTGGAGCTTTCTATCACCGTGATTGCTTCCAATGCGAGATTTGTAACGC
GTCCATCGCTAATCAAGCTTTCCAACAGAAAGACGGATTCCGTTACTGCA
TGCCGTGTTACAAACAACAGTACGCCAAACGTTGCGCCGGTTGTGATAGT
TATATAGTGAACGGAGAGTACTATACTGTCGATTCAGATAGCTGGCATAA
AGAGTGTTTCAAATGTGAAGTTTGTCATATTGTTCTCCAACAACAAACGT
TTGTTCAAGAGAATGGTAAAGTTAAATTGGTATGTGAAAGCTGTCTTTAA
ACAAAGAAGTGCGTTGTGGAATGTACCCTCTTCTTTGATTGGCTGTTGTA
GAAGGGCCTACCAAGTGCCGAAAAGAGAAGCTTTTGAATTCAACAAGGGT
TTCATGGAGCTGATGGGTCTTGTGCATTCATAAGATCTACCTACAACGCT
GTAAAAAAGACTCTGTCGATTAAACCTAAGAACGCATTTATTATGAAAGA
AGCCGCATAAAAAGAAAGGAATATTTGGTATAGACAGACAAACTCATGAA
GCATTATGGGAATGTTCTATGCGTTTAATCAATCCTGATTCAAAAAGTGA
AGAAGTCAGGCATTGAAACTTACAAAATGAACCTTGCTTACTTATAAAGT
AAAAAAAAAGTAATACCTTGAAGAAGTTTGACAAAATTGTAAATGAATAA
TGAACTGGAAAATTTCACATTCATATTTCTCAAATGGAAGAAAAAGAAAT
TAACTATTTTGTATTAAAGGTTTTAATAGTATCATTAGTTGTCAATTAAT
TAATTAATTATGTTTTTGTTTAACTAAAATGGTGCAGTCAGATGCTCAGG
GAATATATTCCTTAGTTTCTGTTAACTTGATTGTAAACTATCAAGGATGT
AATCGTAACTTCGGCATAGGCACCATAAACCTTGGGTTATCTGACTGTAT
TTTGCTTTTAACTGCACTTTTTCTGTTAATTTTCTTATTACTTCACTTTA
GATTCTTTAGAGTTTAAAAGTTTGAGGGAAGGGGTTTCGGGGTTGTTGCA
ACCCATATTCACACATTGTTTTTATTATTCCACATGATACACTTTCAATT
AATTTATTTTGTGTTATCGTTAAATTATTTCGGTTGTATTTAATTTTTTT
TTTTTTTGCTTTTACATTTTTTTTACATCTCTAACAATAAAATTCTCTAT
TCTTCTAAATCGGAAATGATAAAAATTCGATTAAAATTATCTGGATTTGT
TGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000750XLOC_000750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001465-exon-sc0000010-1575043694:383596..384296TCONS_00001465-exon-sc0000010-1575043694:383596..384296Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:377252..377426TCONS_00001465-exon-sc0000010-1575043694:377252..377426Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:376233..376463TCONS_00001465-exon-sc0000010-1575043694:376233..376463Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:375834..376049TCONS_00001465-exon-sc0000010-1575043694:375834..376049Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:374000..374186TCONS_00001465-exon-sc0000010-1575043694:374000..374186Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:373310..373508TCONS_00001465-exon-sc0000010-1575043694:373310..373508Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:371541..372983TCONS_00001465-exon-sc0000010-1575043694:371541..372983Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:383596..384296TCONS_00001465-exon-sc0000010-1510915933:383596..384296Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:377252..377426TCONS_00001465-exon-sc0000010-1510915933:377252..377426Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:376233..376463TCONS_00001465-exon-sc0000010-1510915933:376233..376463Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:375834..376049TCONS_00001465-exon-sc0000010-1510915933:375834..376049Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:374000..374186TCONS_00001465-exon-sc0000010-1510915933:374000..374186Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:373310..373508TCONS_00001465-exon-sc0000010-1510915933:373310..373508Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:371541..372983TCONS_00001465-exon-sc0000010-1510915933:371541..372983Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:383596..384296TCONS_00001465-exon-sc0000010-1491911889:383596..384296Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:377252..377426TCONS_00001465-exon-sc0000010-1491911889:377252..377426Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:376233..376463TCONS_00001465-exon-sc0000010-1491911889:376233..376463Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:375834..376049TCONS_00001465-exon-sc0000010-1491911889:375834..376049Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:374000..374186TCONS_00001465-exon-sc0000010-1491911889:374000..374186Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:373310..373508TCONS_00001465-exon-sc0000010-1491911889:373310..373508Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:371541..372983TCONS_00001465-exon-sc0000010-1491911889:371541..372983Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:371541..384296 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.239116	0.0597627	0.0648729	0.0595075	2.29039	1.28298	8.68649	10.3001	10.7238	9.77179	3.33387	6.98764	6.5499	4.70781	6.57389	6.26049	3.45859	2.48315	9.01243	12.9323	5.00203	5.71134	6.97562	10.0944	9.93856	7.90848	13.1276	10.5112	40.5691	52.5777
Blast
[Close]
BLAST of TCONS_00001465 vs. Swiss-Prot (Human)
Match: FHL5 (Four and a half LIM domains protein 5 OS=Homo sapiens GN=FHL5 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.331e-59
Identity = 92/269 (34.20%), Postives = 146/269 (54.28%), Query Frame = 1 
Query: 1372 AQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAFYHRDCFQCEICNASIANQAFQQKDGFRYCMPCYKQQYAKRCAGCD---SYIVNGEYYTVDSDSWHKECFKCEVCHIVLQQQTFVQENGKV 2169
              HF C  C  SL G+++++ D  P C+ CYD  F++ C +C K I  D +D+ Y D HWH+ C  C+ CN  L    F  +D+  LC++CY      +C  C +   PG++++E KG +WH+TCFVC+ C+ PI +K  I  E    C PCF+++FA  C  C++V+  GG+      +H++CF C  C   +  + F  +D + +C+ CY   YA +C  C    S +   ++       WH ECF C  C + L  + F+ +N ++
Sbjct:    3 TAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEI 271

HSP 2 Score: 96.6709 bits (239), Expect = 2.047e-21
Identity = 62/214 (28.97%), Postives = 89/214 (41.59%), Query Frame = 1 
Query: 1186 WHPGCFECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELIFNGEY-VRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFE--PGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVC 1818
            WH GCF+C KCN  L +  +  KD  + C   +  E   +C  C   I  G   +      +H   FVC  C   +  +  +  +    C+ C++ +FA  C+ C K I      + + D+ WH  C +CS C   L    F+ RDD   C DCY      +C  C K      GAK +  +   WH  CF C  C   +  K F+       C
Sbjct:   62 WHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVI--TSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFC 273

HSP 3 Score: 87.8113 bits (216), Expect = 1.758e-18
Identity = 63/276 (22.83%), Postives = 113/276 (40.94%), Query Frame = 1 
Query: 1201 FECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELI-FNGEYVRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAF-------YHRDCFQCEICNASIANQAFQQKDGFRYCMPC 2004
            F C  C   L    Y  KD   +CV  +       C  C + I  + + +   ++ +H   F C  C  SL  +     D   +C  CY ++ +S C  C ++I      + +   +WH+ C VC  C   +     + ++    C  C++K     C  C K    G   +    + WH  CF+C  C+  +  ++F+  +    C  C++  +A +C  C + +   G+  G  F       +H +CF C  C+ S+  + F  ++   +C  C
Sbjct:    6 FYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGG--ITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPI--SGLT-GAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKC 276
The following BLAST results are available for this feature:
BLAST of TCONS_00001465 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FHL54.331e-5934.20Four and a half LIM domains protein 5 OS=Homo sapi... [more]
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