TCONS_00001465 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001465
Unique NameTCONS_00001465
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3152

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001465 ID=TCONS_00001465|Name=TCONS_00001465|organism=Clytia hemisphaerica|type=transcript|length=3152bp
tctttgtttggttAAAAATCTTACAGTATTAAAGAAAcaacttttccaaa
aaagaatttatttttattggttTTTATTTCGTCTTTGTCATACAACTAAT
CACGGGACTGCAGACAATACCTGACTTGACAAATTAGTTTAATCTCCATA
AAGTCGGGTTTGATTACTCACCATACAAAAGGACTTACTGGAGATTTTAT
TTCGTCATTGCAATAAAACTTTATCATGAATACAATAGATGATGGTAATG
ATACGTTTAGTCAAATGTTGAATTACCCCGATTACCAGGAACTCGAGGAA
TATAAATTACCTGATGATGGTTTTTTTGATATAGTGACTATACAAGAAGA
ACCAGAGGACCAGCCCTCTGAATATCAAAACCAACCTATATATTTAAACA
TCACATCTAAGAGAGATAGTATACAACACTATAGCTTACCAAAGATGAGT
GTTGTTTTGAACGCCAATACCGAGGGCGTTTTTCGCACTAATTATGGCGG
TGGTGTTGGATCAGATTTGGTGATCCATAACAAGGAATCAAGATCAGATT
CGATTAACAGTCAGGGTGGTAAACGTAAAGCGCCACCCAAACCGCCCCGC
TTGTCAAGATCTGATTCGTCTAATAGCAGTGGTAGTGGTGGGCGTGGTTC
GAGCCGAGGGAACAGTTTCTCGTTCCCAAACCCTCCATCATCACTCGAAA
GAAATCAGTATTTGAATTGTGAGCCGGACGAACACGGAAAAGGTATGGAC
GATATCATCGATTCGTATAAAAAGAATCGGGAAAGTTTACACGATACAAA
CGAAAACATCGTACTTCATAATGGGCACGAGAGCGATCAATATATGTGGG
TCCCGGCTGGACTAGACGCTAATCTAATCGAAGATTACATGGCTTCTCTA
CCACGTCACAAAGTTCCACATTTCAAGAATCCTGATGGCATCTCTTACCA
TAACAAACAACTTATCCAACAAATACCTCTACAAGATTCCAATTTCGAAA
ACATCTCCACTCTCGAAGATGATGAACGACAAATTTTTAACGGATTTAAA
AGAGAACGTGACTCCCAAATGGATTCGGGCAAAGTCATAGTGGCAGATGA
TAATTATGTCTGTCGAAAATGCGGAAAAGAAATCTACCAAGATGATTTAC
TAGTCAGGGCTTCAGCCCTCGGAGAAGAAGCTGTCTGGCATCCAGGCTGT
TTCGAATGTTGTAAATGCAACGAGCTGTTAGCAGATCTTATTTACTGCTA
CAAGGATGGTGATATTTTTTGCGTCCGCCATTTTGGAGAAGAGTTGAAAC
CAAGATGCTGTATGTGTGACGAGCTCATTTTCAACGGCGAATACGTGCGT
ACGGACGAGAAAGCATACCACGCTCAACATTTCGTGTGTCATATctgtga
atgtagtttaacagGAGAACAACATCTAGTTGACGATGGACTGCCCATCT
GCATTGCTTGTTATGATGATAAATTTGCATCGGTTTGCCACAAGTGCAAC
AAATCTATCGGTGTTGACGAAGAGGATGTCATTTACGATGACGAACATTG
GCATGATTACTGTTTAGTTTGTAGTCTTTGCAATTGCCGGTTAAGCGGTA
CAAGTTTTGTTATTCGTGATGACAATTTCTTATGCTCGGATTGCTACCAA
AAGACTGATGACAAAAGATGTAAAACGTGCGGCAAAGGATTTGAACCGGG
TGCCAAAAGgtTGGAACTGAAAGGAGAATTTTGGCATGACACGTGTTTCG
TATGTGATATCTGCAAGTCACCTATCACGTCCAAGAAATTCATTCAACAC
GAAGGATCACAAGTTTGTTGTCCGTGTTTCGATCAGAAATTCGCGAAACG
TTGCGCGAAATGTGAAGAGGTTTTACGCGAGGGAGGTGTAGCTTGCGGTG
GAGCTTTCTATCACCGTGATTGCTTCCAATGCGAGATTTGTAACGCGTCC
ATCGCTAATCAAGCTTTCCAACAGAAAGACGGATTCCGTTACTGCATGCC
GTGTTACAAACAACAGTACGCCAAACGTTGCGCCGGTTGTGATAGTTATA
TAGTGAACGGAGAGTACTATACTGTCGATTCAGATAGCTGGCATAAAGAG
TGTTTCAAATGTGAAGTTTGTCATATTGTTCTCCAACAACAAACGTTTGT
TCAAGAGAATGGTAAAGTTAAATTGGTATGTGAAAGCTGTCTTTAAACAA
AGAAGTGCGTTGTGGAATGTACCCTCTTCTTTGATTGGCTGTTGTAGAAG
GGCCTACCAAGTGCCGAAAAGAGAAGCTTTTGAATTCAACAAGGGTTTCA
TGGAGCTGATGGGTCTTGTGCATTCATAAGATCTACCTACAACGCTGTAA
AAAAGACTCTGTCGATTAAACCTAAGAACGCATTTATTATGAAAGAAGCC
GCATAAAAAGAAAGGAATATTTGGTATAGACAGACAAACTCATGAAGCAT
TATGGGAATGTTCTATGCGTTTAATCAATCCTGattcaaaaagtgaagaa
gtCAGGCATTGAAACTTACAAAATGAACCTTGCTTActtataaagtaaaa
aaaaagtaataccTTGAAGAAGTTTGACAAAATTGTAAATGAATAATGAA
CTGGAAAATTTCACATTCATATTTCTCAAatggaagaaaaagaaattaac
tATTTTGTATTAAAGGTTTTAATAGTATCATTAGTTgtcaattaattaat
taattatgtTTTTGTTTAACTAAAATGGTGCAGTCAGATGCTCAGGGAAT
ATATTCCTTAGTTTCTGTTAACTTGATTGTAAACTATCAAGGATGTAATC
GTAACTTCGGCATAGGCACCATAAACCTTGGGTTATCTGACTGTATTTTG
CTTTTAACTGCACTTTTTCTGTTAATTTTCTTATTACTTCACTTTAGATT
CTTTAGAGTTTAAAAGTTTGAGGGAAGGGGTTTCGGGGTTGTTGCAACCC
ATATTCAcacattgtttttattattcCACATGATACACtttcaattaatt
tattttGTGTTATCGTTAAATTATTTCGgttgtatttaattttttttttt
tttgcttttacattttttttacatcTCTAACAATAAAATTCTCTATTCTT
CTAAATCGGAAATGATAAAAATTCGATTAAAATTATCTGGATTTGTTGCA
AC
Run BLAST on NCBI

transcript from alignment at sc0000010:371541..384296-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001465 ID=TCONS_00001465|Name=TCONS_00001465|organism=Clytia hemisphaerica|type=transcript|length=12756bp|location=Sequence derived from alignment at sc0000010:371541..384296- (Clytia hemisphaerica)
TCTTTGTTTGGTTAAAAATCTTACAGTATTAAAGAAACAACTTTTCCAAA AAAGAATTTATTTTTATTGGTTTTTATTTCGTCTTTGTCATACAACTAAT CACGGGACTGCAGACAATACCTGACTTGACAAATTAGTTTAATCTCCATA AAGTCGGGTTTGATTACTCACCATACAAAAGGACTTACTGGAGATTTTAT TTCGTCATTGCAATAAAACTTTATCATGAATACAATAGATGATGGTAATG ATACGTTTAGTCAAATGTTGAATTACCCCGATTACCAGGAACTCGAGGAA TATAAATTACCTGATGATGGTTTTTTTGATATAGTGACTATACAAGAAGA ACCAGAGGACCAGCCCTCTGAATATCAAAACCAACCTATATATTTAAACA TCACATCTAAGAGAGATAGTATACAACACTATAGCTTACCAAAGATGAGT GTTGTTTTGAACGCCAATACCGAGGGCGTTTTTCGCACTAATTATGGCGG TGGTGTTGGATCAGATTTGGTGATCCATAACAAGGAATCAAGATCAGATT CGATTAACAGTCAGGGTGGTAAACGTAAAGCGCCACCCAAACCGCCCCGC TTGTCAAGATCTGATTCGTCTAATAGCAGTGGTAGTGGTGGGCGTGGTTC GAGCCGAGGGAACAGTTTCTCGTTCCCAAACCCTCCATCATCACTCGAAA GGTAAGTATCATGTTCTCTCTTAATTCAATTATTGTTTTCGTTTGTCGAT GGCCTCACATTTTACTTTAAAGTGGTATTTAGAAACCGATATAGTTGGTT ACTTTTCTTTAAATTCTCATAGAACAAGAAACCTCCATTTATAGGTTTGT TACGTCTGCTAGAAATGTGACCATAGTGCAGTGGTAGAGCATCCGGCTAC GGTTCGCAAGGTTGTGTGTTCAAATCCCAGCCGGGTCATAACAAGATTCC CAAAATGATACTTGATGCCTCTCTGCTTGATGCTCCCCTACCTTCGGGTA GATAACTATCGAAAGAGGATCCTTTGGGTCGCCTCCGACTGTGGTCGCAG ACTTACTTACTAGAAATGTCTGGATTTAGGCCAAAGTCTGGAAAGTCTGG AAAGAGTCTAGAATTGGCATACCTGTCTGGAAAACATATGGAATTGGAAA CATATTAGATTTACATTTTTCCGAACTGATAACTTTGCAGATTTTTGCAT CTTTTCTTTCTTACAGCTTGCATTGGGTTTATTATTGCAAATCTTTCGCC ATTTTTAGCCAACTAAGGCCGACTTGCTCGATTAAACATGAATTACTGTA TCAGCGTTCTGATATAAGTTGGAGGGTATTCTTCATTATATTCTCAACAA TTCGGTTGAGTGTCTGTCCGACTGTTCAACATTTTTGGGGGTAACCCGAA GTGACTGAAGATTTTCACATTTGCTACCAGGTTGTTCTTATTTCTCCTTT TTTTTTATTGTAAGGACTTAAAGGGACAGTTCTTTTATCGAAATAAAGCT AAATTTTTGGGGTCGCCTAAAGAAAAGTCCCACTATGTCATATGGTTAAT GTAGTGTATTCAAGCACACTCGAACACGCTGTTTCTTCTTCGATGCAATC ATTTTGCTTTGGTTTTCTTGTGCAATTTTTGTCCTTTCTCTCTCCATTTA AAAAGTCACCCAACCAAATGTTACGGGATCGGTTGGCATCAATTTCAAAA AAATGAGAATATCTTTTTTAAACCAATCAAATTAAAGCCTAAAGGGTAAT CGTTTGTAGCTTAATAAAGTAAAAAAAATGAGATTCATTAAAACGATATC ATCTCTTATTCTTTTGTATTGAAATTCAATTCCATTAAAATAGGGATTGA TTGAGAGAGGTAAGAAGACAATTTAAATTCATTTGATGAAATTTCAATTA AGATTACCTTAGTAACCGACCCAACTTTGCTGTCAATCTCTCAATTTTCT ATATCTCATTTTTGATTGAAATCAAGTGTATTTGTAAAAACTAATTCATG TGTTTTTGTTGTTGATGAGCGTGTTTTGAAAGCAGAAAAAGGGGGTAAAC GATCCCACTGCCAGGCGTGTGGTAAGATAATTGAACAGCAAAGTCTATGG TAAAGATTTTACAACGCAGTAATAGTCGTAAAATAAAGGTAAACTTTTTG AAATTGTAACTCTGTGGAGAATGGTTTTCTTCGACATTAGTGTTCCAGGA GAAGGTAGATAATCTTGTTCAACACCTTTCTTACTACAATTATGGACAGA AATATTTGAGACAAACACTAGAAGTTACTTCAGAGATCCCTCTTTTTCCC AAACTGCAATGTTCAGTGTGCGGTCGTCCCACCATTCATTGAACTTTGCA AATGGGGGGGGGGGGGGGGAAGAGCTGGGAGTTTAATTTTTTTCTCCTAA TTTTTGTCCATGATTTTTACCCCTACTACAACACATTTCACATTTTTTTT TTTTAAATGTTCAAAGAAAGTGATCAATACAATCATGGTCGAAATATATT GAGATTTTAGTGTATTTTAACGTTTTTCACAATTTAAAGTTCGGGTGAGA ACTGCTAGTTCCAAGCCTTATTAAAGCAAATTTGAGCTTTTAAATCCTGA GATCACACTTTCCAGCTGTAGTTGAACGTGTAGTTTTTAGTTCTCAGTGC ATTGAGATATTGTTTTCAGCAAAGACTTTGAGACTTTGAGCCTTTGAGCC ATTTGGGTTTAACTAAGATTGCTACGTATAGCTTTCGAGCTTGAATATCC ATGCTAGTTCAAATGTAACGGGATTCAGGGTCATCCTTTTTGTTTACGTT TCTAAGGGACGCGCAATATTATATTGACATTTAATAAGTCAGTAAGATGG GAGTTCATTTTTTTGTACGTGAACTTTTTGTTTCTCTTTGATACTCATTC GCTGATGTGTTTTTTTTGATGAATCAAAAAAATCAAATAAAAAAAGTCCT TGAAAAGCTCTTAAACTTAAAAAAACTTTTATATTCAGTTAGATCTAACG TCTACTTGATTTTCCTTTTGAGCTTAATTCGTCGGACATAGTAAATTCAA TTCCCTTTGATGAGAACATAGATAAAATGTTTTTGTTTTCACTTGGGCTA GTTAGTAGCTAGTAGCAGTACGTTTTAAGTTGGTTGGTCGGTCGGTCGTG TGCAAAATTGTTTTTTGTCAAATTTTCTGTGTTTTGTGTTGACAAGACGG GGTCGATTTTTTTGATAAAATTTCAAACAACCTTTTACAAGCTTAATATG TAAATAAAAGAAAATACTGATCTCTCATTCTCTTTAGCTTTATTAAAAAC TTTCTATGTGAAGCTCTTAAACTTTTTCGTCCTCTAGGAATCTTGTAAAA AGCGATAAAGGGTTGTTGTATGTTGTCGTCTTTAGGTGATTTATCTGGTA AGTTTTGGTAAAAATCTTGAACGAGGAGAAATTGATTAAGGAAAGTCTTT TAGTTTTCTTTCGATTTTGAATTATTTTTCGACTAAATCCTAAAGTAGTA CATAGCGTCAGCCCCCCCCTTTAACTGGATCAATTTTATGAAAGTGTCTA GGGTCAAAAGTCCTGGGGGCTAACGAAAAATTCATAAATCTTTGGGGGAC TTAAAATTCAGGGGGGACCTAATTTTTGCCTGGGACCTAAACCCAGGCTG ACGCTATGTAGTAGCGTGGTGGCAGGGGACAGGGGGCAGTGACAGCTTAG ATAATGGCAATTTTCGACCAAAAATAGAGAAAAAAAACCACAAGTCTTGC AAAAGCCAATTAGTACTAGTACTTCATTTAATACCTTCTGAAACTGAAAA TGAACCCCGTATGGGAAAGGGTGAAAGATTTTGAAACTTCCCAAATATAG CAAATATATATGACTCAACTCTTTGAGAGATTTAGAATATTTTTCATAAT ATTTTTCAAAGTTTCTTCTTATTCCTTTATACGCTGCCTGACCGCATTCA TATATATTCTTTATAAGGAATTCCCTTGATTCCAAGGGGAGAGGTAAAAT AATCTCTTTCGTATGTTCTAATTAAGCCTTATGGTATCACTGTTCAAGGG TTACATCAAATGAACAAAGCCCTACGATACTCGCCAATACCCAGCTGGCG CACAACGTTGTTTCGACGTTCATCTAAACTATATGCACGTTTTGAACGTT GGATGAACGTTAAAATAACGTTGTGTGCAAGCTGAGCAGCTGTTAACCCA CCCATGCTAAGAGGGTGTTTTCACTTGAAATCAAGCCAAAGTGAAGAAAA ACACGAACAGGGCGAGAACTAGCATCTCATTGCCTTATATGTAGTTATCG AATTTATTATGCATTTTCAAATTTTGATATATAAACGTACTACTGACTTT AGACTTGTAAATTTCAGTCAAAAACGGTAAGAACTAGTAAGATAATTTTC ATTAACATTCTTAGAAGGCCAATAAAAATTGTTGCCTTTTGCACGTACTT TAAGGAACACAAGTTGAAGAGTCCACACATCATATATTGTATGGTAGGTT ATGATAGGTTACTTGTTAAGCCAACTCTACTTAAGATTGCCTTTGATCGA GTTCAGATACATAGGAAAAATGTAATCGGAAATGTCTCTTGGGGTTCAGT TTATAGTGTCAACGTATCCACATTCTCCGATGCTGACTTCATTGATACAG TTGACGCATTCTAATTCGATTTTTAAGGGGAATAGGATTGTCATCGAATA AGGGAGCGTATTGAATAGTAGAACGTCAAGTTAGAGAGCGTCAACTGTAG GTATTCATTGAATTCCAAGCCCGAAAGGCTAGACTCGAGACTCTTGGATG GGAAATGCAACCACTTATTTCCCATCCAGAACACCCGCGCGCTTACACAA ACGCCGGATTAAAACTAAAATCTATTCCAGCGATTTCAGAAAATGCAGTC CTCAAAAACAAAGGAACCGCTAGATACCATCCGTCGTCATTATTACGGCG CCTTCTAGGCGCGTTTTGGATAAGAAATAAGTGGCTTCACTTTTTCTTGC CTAGGATTCTACTCTAGCCCTTCGGGCTTTAAACTCAATGGGTATATTCC TTCAACAAAAAATATTACAAAAGCTTATACCTTGGGTTATTAAACAATAA CAAAAAAATCTGTCTGAAGGCAAAACATGTCCTACAAACTTTTATCAATG CAAATTTTTTACTCACGTTGAAAAAAAATGTCTTATCTCGTCCTGAAGGC GGACATGACAAATAGAGTATTTGGAAATGACTGTAATCTCATTGACGTCA CGCATGCATCATTGTTAGAGTCAGCAGCGGAGTCATGCGCTCGCTTCATT CTTTACATTGTTATGTTAGTGTTTATCGTTATTGTTTCCAATTTCTGTTA TAACCAAACATGGATATATCCGTCTCAAACTGAATCGTTCTTTTTAGCGA GGGATCGGAAATAAGGTATTAATTACAGAAAATTACTCTCGTTCCTAACA ACCGTCTTTTACCAATTTGGATATTTTCTTTTCTTTTCTTTTTTGACTAT CTCTTGTTGAAGAGTGATTTCGTTGGTTTTGATATCAGAGGTGAATGGTC GTAAATTTTTTTTTGCCAGACGAACGAAGTACTGTATATGCCCTTAAAGT GCTATGATCTCTAATTTTATCGAGAAATATTTGTTTGGATTGTGTGTAGT ATATACTGCAAAGTGTAATGTTTTTGTTTTTGTTTTGGCGTGCCACTCAA AGGCTTAATAAAAAATCTTATAATGTGATTCCTTACACATTCTTAAACCG TTTTATTTATCTTTTCTAGTGTAGTGTAGTGGGTGAGTTTCGATGTTAAC AAAAATCCTGTGAGAAAACTTTCAAGTTAAAGCGTTTTTTGTTGTTTTCG GCTAATTCAACTTTATATTACAAGCTTTCATTTTCGTCATTTTTACGTTC TCGCAATTTTTGATATAGTTGTTATGACTTTAGTTTGAAACAAGAGAGAC AAAAACTAGAAATATAATAGTTCTATNTGTTATGACTTTAGTTTGAAACA AGAGAGACAAAAACTAGAAATATATTAGTTCTATATTGTTCTTGTTTTGT CTTTTCAAATGATCTGGTCTGCCATCCACCAGCTTCTACATTTTTAAAGA CTTTCTAGAAAAACTAAATAGAATTTGAAGTAACTTTTGCAAATAGTAAT TCGTAAAAATACTTTTTTCGGGTTTCTTTACTTTTGCTGCTCAGAACTTT TTGGAAGCATTATACCTTATAGTTGTTAAGAAGTTTTTATAATCTTACTT GCTTTTTAATCAAAACAAAGTTAATTCCATTCAAGTACTTATTTTGAGAG TTCAGTGAGGATTTTAACGTCTTGTTATCTGATGTGATGCACACATATTT AGGTTTTTCTTGTTTAAAATTCTTTCCTTATATCCTTATTTGGACTTTAT TGAAATTGCGAGGAGTTGATTTACTACGTCTATTTGGATTTATCTGAAAC TCGGAGAGATAAGATTTCTCTTGTTTCTCTGTTAAGCAATTGAGAAATTG GAGTAGGCTTTCAAAAAGATTTTATCTTCANCTGTTTCTCTGTTAACCAA TTGAGAAATTGGAGTAGGCTTTTAAAAAGGTTTTATCTTCATAACGGTTT CACTGCTTTTTTATTTCTTAAGATTTTCATTTAACTGTCTGAACAATCTA CAACCACAATTTTTTCGGTTATTCTGTGTCTTTTTGGAAGATTTTAAAAA GAAAAATTTTTTAATGCTAATTCAAATTACTATCATTGACAGAACTGGCG TCCATCGCAACCTTCGACTAGTGGGAGACGGTGGATAAAAAGCTCTGTCC AAGATTATAGATTAAACTTTTTTAACAGGTGTATGTACTAAAAACTTTTC TCTCCATTTTCTCTCTTCAGAAATCAGTATTTGAATTGTGAGCCGGACGA ACACGGAAAAGGTATGGACGATATCATCGATTCGTATAAAAAGAATCGGG AAAGTTTACACGATACAAACGAAAACATCGTACTTCATAATGGGCACGAG AGCGATCAATATATGTGGGTCCCGGCTGGACTAGACGCTAATCTAGTACG TAAACCTTTTTATTGATTCTGGTTTTCTTACTTATCAAAATATTGAGCTT CTCACTATTTTTAATAGGCGAGTTTATGTATCGGAGGATATCGAGGGCGA CGGTAAGTGAAGTCGACGCAAAACAAAGTCGATAGTTGGTATACAGCTCT ATATCGCCTTTACTCACCTAAACAGACGACGGTATTATGGGTGTTTTTAC CGTTGTCGAGTAAAATGGACTTTGCTTTATATCGTCTCCTAGAATTTATC TCACACTAATTCGCTATTAAGTGACATCAGGCCTTTGGATCTGCTAGTTT CGAAATCTTGACGAAACACTGTGGTCTAAGATTAAGGTCTGTAGCCTAGA AAAAAATAGGATATCTCTTATATCTAGCATTCTAGTCTATCTGAAGTATG TTTGTAACAGCGGATATATCAAATCGCTTTGCTAAGCATGATTTTCATAC TATTTCTGGCCATGTTTTTTTGAAAACGACTTCCACATTTTGAAGTTCCT GATCCTGTTTTTGTTTTTGTTTTGAATTCCGAGGCTTATGATGTGAGGTC CTCATAACCACGTGCGTTTACAATAGGATATTATTGGTGGTCGATAGTTT ACGTCGAAACTCTCCCGGCTATTGACTTTCAAACTCAACATAGTATTTTC ATACGCAGACCATTTTATTTACCAGTGAACCTTGTTATTTCGGAGAAAAC TATCCAAGGTTCTAACATTTACTTAAAGATTAATGCAATAAACTAAAATT ATTCTAAAAAAATCTATTTTCACCTTTAAACAGATCGAAGATTACATGGC TTCTCTACCACGTCACAAAGTTCCACATTTCAAGAATCCTGATGGCATCT CTTACCATAACAAACAACTTATCCAACAAATACCTCTACAAGATTCCAAT TTCGAAAACATCTCCACTCTCGAAGATGATGAACGACAAATTTTTAACGG ATTTAAAAGAGAACGTGACTCCCAAATGGATTCGGGCAAAGTCATAGTGG CAGATGATAATTATGTAAGCTTAAAGTTTGGTTTCATACAGTTAAAACCT TCTTCTTGTCATTTACCCTAAAGTTTTCATAATGCATTTTTATTTCAGTC TTTTACCTTTCAGCCTTTCGATTTTAACTGACTTGACAGAAAGTTATTGT AGATGGTGAATAAGATGATCATTTTGTTATTATTGAATCCTTATTAGGTC TGTCGAAAATGCGGAAAAGAAATCTACCAAGATGATTTACTAGTCAGGGC TTCAGCCCTCGGAGAAGAAGCTGTCTGGCATCCAGGCTGTTTCGAATGTT GTAAATGCAACGAGCTGTTAGCAGATCTTATTTACTGCTACAAGGATGGT GATATTTTTTGCGTCCGCCATTTTGGAGAAGAGTTGAAACCAAGATGCTG TATGTGTGACGAGGTTGGTCATTGTTCGCTTTTCACTGTTCATTTTACAC GCGAGGAATCGGATTTTCATAAATTACCTCGCGAGCAACGCTTACCTCGT TTTAAAGAATTGCTATGGTAATTGTTTCCCGGAGGAGTTCATAAGAAGTC TAAAACGAGGCAGTCGTTGTACTCGAAATAATTCATGAAAAAGGTCTATT TATTTCTCGTGAACCCGTGCTTTGAAGGTAAAAGTGAGAATAATATGTAG TACTCTCAGGTACCTAACAAACGGGAAGGAGCTGGGAAAATTCTTCGAAA TTCAATAAAGGGGGGAGGTGGTACCTCATTGTGGGGGGGGGGGGGACCTA ATTTCCGGGGGTTTGAAATTGTACATCTAAGTTCCCCAAATATTTTCAAA TTTAATTTAAGGGGGTCCTAATAAGGTCCTGGGGAAAATTATCGAAAAAT GAACGAAAAAATTAACAAGCGGGGAAGCGTTTATGATGCACATAAGTAGT AATGTGAAAAAGAGTATCACTTTTTTTCTGAAGCAAATAAAAATGTTTCA ATTAAACGTTGATCTAGTATAATACGGTATCAAATTACTTTCCGGCAGCC TGTCTATAATAGGCGGCCGCCTATCTTACCGTTTCTGGTCTGAAATTTAT TTTCAAATCGTAGGTAGCCGCTCTTTATAATGAAATTTCAGGCGGCTGCT TCACTTTACTCAGGCGGCCGCCTAATTTTAATTCGCATCTTCGACATGAA AAAACAAACAAAATGGCTTCAACGAATTTAGAGGTACAAAGATGCTCCTG TCTTTGACTTCAATAAGGTAAACTAAACGTTTTTATTGTTTTATTTTTCT AATGGAAGGAGAGACCGGAATCTTTTCCTTATTCTTCAGCTCAACAGCAT TGAAAATGCTGAATCCTGCTGCAAAGAAGAAAAAAAAAGTTACTGTGCAG TGAAGGTGAAGCGAGGGATCAGCTGTTGCACAGCAAAAAGTTACCATTTT GTTAGATTTCGACAGGCGGCCGCCTGGGTTGAGACAACAAAATAACAGAC CAGAATATTATCAAGATAGGCGGCCACCTTACCTAAAACGTTAAGTCAGG CGGCCGCTTAAGATTTCAGGCAGCCGCCTGACCTTTACTGCCCATCCAAG ATAGGGACAGGGTTGGCCATATCAGCCACGGTATTATTCTTTTGCGGTCG GTCCATCTGTTATTGTTTGTAATGACCTCTTAAATAGTGTTTTTGAAATT AAGGATTCAAAAATAATTTGATTCTCGTGTATAAACTAATGGGCTAAATT AAGATTATGACTACATATGTCGTAATTTCTCATAAATCTGATAATCATTT CGTTATATAGTTGAGCTTTTCAAATCCTTTGTCCCTTTTTCCCAAATGAT ATTAATGCTCTACTCTACTACGTTTATAGCAATTTTCAAGAATAGAGCAA TGGCTTGGTAATAAAAGATGACCAAGACCATTTAAAAATTTAGGATATCT CTAAGAGCGTCAAATTTTTCCTTTTTTTTAGTTTTTAGTTTTGATTTTTG GCCCAAATATACCTGTCACAAAGTACTAAACCCCATCCCCTAGGGATAGC ATTATTACAACAGGAAGTTGAAAACAATCCAACATTTAAAAATTTATTTT CTCATTCCAGCTCATTTTCAACGGCGAATACGTGCGTACGGACGAGAAAG CATACCACGCTCAACATTTCGTGTGTCATATCTGTGAATGTAGTTTAACA GGAGAACAACATCTAGTTGACGATGGACTGCCCATCTGCATTGCTTGTTA TGATGATAAATTTGCATCGGTTTGCCACAAGTGCAACAAATCTATCGGTA AGATTCTCAGTTTGGTAAAAGTGGCTAAAAATATATTAGCTTTTTTTTTT CCTTTTTGTATTGACTGGTTGGGACAACTTGATTTTTTTTTACTTTTCTT GTGATTTAGTTGATCATGCCCAACAATGACATTGTTTCATTGACAAATTT TTTTAAATATATTTCATAAAATGCTAGGCACTTATAGCGGTGACAGGAAA ACTGCCTGCCTAAATTCACCCTCTAAAATTACCTAAAGTCTACTGATCGT TATGTTTTCATTTCTGGTTGACAGTCCACACTGGGCTTTGAATGTTTCGA AATGCAAGCATTCGCTACATTGTAGTCGTAGTTATGGAATAAACTTTATA TAACTCCATAACTCGAACATACAGGGAACACAGTTATTTCAAGTTAAGGA GGTTCGAGTTACAGATATCCCAATGTATTATGGAAGAGGGTATTTAGCGC AGATATCATAAAACAACTTTTCTTTTTCATTCAAACAGGTGTTGACGAAG AGGATGTCATTTACGATGACGAACATTGGCATGATTACTGTTTAGTTTGT AGTCTTTGCAATTGCCGGTTAAGCGGTACAAGTTTTGTTATTCGTGATGA CAATTTCTTATGCTCGGATTGCTACCAAAAGACTGATGACAAAAGATGTA AAACGTGCGGCAAAGGATTTGAACCGGGTGCCAAAAGGTTTGTAAAGTTT TTGTGACAGCGTAACCTATGCTTATTTTTTCATTCGGGTCGGAGATAAGA TTTGGCGAACCAAAAATGTCGAAAAAATTTTCGGATTTATTATTTTAGCG AATCTGCGTTTAAAAAAAAAAATCCCAGATTTCGCGACTCGTTAATTTCG TTAACAAAGGCCCTTAAACCGCCAATTTTCGTCAAAATTAGTAGATTCAC AGTGTATTTTATACCGAAAATCTTTTTTCGCGAGTTAACGATTCCAGGTG ATTACTAAATAAATTCGAAAGCTTTAAATTTGTTTACACTTTCTTACTCT TTTAAATTTTCAGGTTGGAACTGAAAGGAGAATTTTGGCATGACACGTGT TTCGTATGTGATATCTGCAAGTCACCTATCACGTCCAAGAAATTCATTCA ACACGAAGGATCACAAGTTTGTTGTCCGTGTTTCGATCAGAAATTCGCGA AACGTTGCGCGAAATGTGAAGAGGTTTTACGCGAGGGAGGTGTAGCTTGC GGTGGAGCTTTCTATCACCGTGATTGCTTCCAATGCGAGATTTGTAACGC GTCCATCGCTAATCAAGCTTTCCAACAGAAAGACGGATTCCGTTACTGCA TGCCGTGTTACAAACAACAGTACGCCAAACGTTGCGCCGGTTGTGATAGT TATATAGTGAACGGAGAGTACTATACTGTCGATTCAGATAGCTGGCATAA AGAGTGTTTCAAATGTGAAGTTTGTCATATTGTTCTCCAACAACAAACGT TTGTTCAAGAGAATGGTAAAGTTAAATTGGTATGTGAAAGCTGTCTTTAA ACAAAGAAGTGCGTTGTGGAATGTACCCTCTTCTTTGATTGGCTGTTGTA GAAGGGCCTACCAAGTGCCGAAAAGAGAAGCTTTTGAATTCAACAAGGGT TTCATGGAGCTGATGGGTCTTGTGCATTCATAAGATCTACCTACAACGCT GTAAAAAAGACTCTGTCGATTAAACCTAAGAACGCATTTATTATGAAAGA AGCCGCATAAAAAGAAAGGAATATTTGGTATAGACAGACAAACTCATGAA GCATTATGGGAATGTTCTATGCGTTTAATCAATCCTGATTCAAAAAGTGA AGAAGTCAGGCATTGAAACTTACAAAATGAACCTTGCTTACTTATAAAGT AAAAAAAAAGTAATACCTTGAAGAAGTTTGACAAAATTGTAAATGAATAA TGAACTGGAAAATTTCACATTCATATTTCTCAAATGGAAGAAAAAGAAAT TAACTATTTTGTATTAAAGGTTTTAATAGTATCATTAGTTGTCAATTAAT TAATTAATTATGTTTTTGTTTAACTAAAATGGTGCAGTCAGATGCTCAGG GAATATATTCCTTAGTTTCTGTTAACTTGATTGTAAACTATCAAGGATGT AATCGTAACTTCGGCATAGGCACCATAAACCTTGGGTTATCTGACTGTAT TTTGCTTTTAACTGCACTTTTTCTGTTAATTTTCTTATTACTTCACTTTA GATTCTTTAGAGTTTAAAAGTTTGAGGGAAGGGGTTTCGGGGTTGTTGCA ACCCATATTCACACATTGTTTTTATTATTCCACATGATACACTTTCAATT AATTTATTTTGTGTTATCGTTAAATTATTTCGGTTGTATTTAATTTTTTT TTTTTTTGCTTTTACATTTTTTTTACATCTCTAACAATAAAATTCTCTAT TCTTCTAAATCGGAAATGATAAAAATTCGATTAAAATTATCTGGATTTGT TGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000750XLOC_000750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001465-exon-sc0000010-1575043694:383596..384296TCONS_00001465-exon-sc0000010-1575043694:383596..384296Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:377252..377426TCONS_00001465-exon-sc0000010-1575043694:377252..377426Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:376233..376463TCONS_00001465-exon-sc0000010-1575043694:376233..376463Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:375834..376049TCONS_00001465-exon-sc0000010-1575043694:375834..376049Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:374000..374186TCONS_00001465-exon-sc0000010-1575043694:374000..374186Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:373310..373508TCONS_00001465-exon-sc0000010-1575043694:373310..373508Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1575043694:371541..372983TCONS_00001465-exon-sc0000010-1575043694:371541..372983Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:383596..384296TCONS_00001465-exon-sc0000010-1510915933:383596..384296Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:377252..377426TCONS_00001465-exon-sc0000010-1510915933:377252..377426Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:376233..376463TCONS_00001465-exon-sc0000010-1510915933:376233..376463Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:375834..376049TCONS_00001465-exon-sc0000010-1510915933:375834..376049Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:374000..374186TCONS_00001465-exon-sc0000010-1510915933:374000..374186Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:373310..373508TCONS_00001465-exon-sc0000010-1510915933:373310..373508Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1510915933:371541..372983TCONS_00001465-exon-sc0000010-1510915933:371541..372983Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:383596..384296TCONS_00001465-exon-sc0000010-1491911889:383596..384296Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:377252..377426TCONS_00001465-exon-sc0000010-1491911889:377252..377426Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:376233..376463TCONS_00001465-exon-sc0000010-1491911889:376233..376463Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:375834..376049TCONS_00001465-exon-sc0000010-1491911889:375834..376049Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:374000..374186TCONS_00001465-exon-sc0000010-1491911889:374000..374186Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:373310..373508TCONS_00001465-exon-sc0000010-1491911889:373310..373508Clytia hemisphaericaexon
TCONS_00001465-exon-sc0000010-1491911889:371541..372983TCONS_00001465-exon-sc0000010-1491911889:371541..372983Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:371541..384296 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.239116 0.0597627 0.0648729 0.0595075 2.29039 1.28298 8.68649 10.3001 10.7238 9.77179 3.33387 6.98764 6.5499 4.70781 6.57389 6.26049 3.45859 2.48315 9.01243 12.9323 5.00203 5.71134 6.97562 10.0944 9.93856 7.90848 13.1276 10.5112 40.5691 52.5777
Blast
BLAST of TCONS_00001465 vs. Swiss-Prot (Human)
Match: FHL5 (Four and a half LIM domains protein 5 OS=Homo sapiens GN=FHL5 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.331e-59
Identity = 92/269 (34.20%), Postives = 146/269 (54.28%), Query Frame = 1
Query: 1372 AQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAFYHRDCFQCEICNASIANQAFQQKDGFRYCMPCYKQQYAKRCAGCD---SYIVNGEYYTVDSDSWHKECFKCEVCHIVLQQQTFVQENGKV 2169
              HF C  C  SL G+++++ D  P C+ CYD  F++ C +C K I  D +D+ Y D HWH+ C  C+ CN  L    F  +D+  LC++CY      +C  C +   PG++++E KG +WH+TCFVC+ C+ PI +K  I  E    C PCF+++FA  C  C++V+  GG+      +H++CF C  C   +  + F  +D + +C+ CY   YA +C  C    S +   ++       WH ECF C  C + L  + F+ +N ++
Sbjct:    3 TAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEI 271          

HSP 2 Score: 96.6709 bits (239), Expect = 2.047e-21
Identity = 62/214 (28.97%), Postives = 89/214 (41.59%), Query Frame = 1
Query: 1186 WHPGCFECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELIFNGEY-VRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFE--PGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVC 1818
            WH GCF+C KCN  L +  +  KD  + C   +  E   +C  C   I  G   +      +H   FVC  C   +  +  +  +    C+ C++ +FA  C+ C K I      + + D+ WH  C +CS C   L    F+ RDD   C DCY      +C  C K      GAK +  +   WH  CF C  C   +  K F+       C
Sbjct:   62 WHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVI--TSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFC 273          

HSP 3 Score: 87.8113 bits (216), Expect = 1.758e-18
Identity = 63/276 (22.83%), Postives = 113/276 (40.94%), Query Frame = 1
Query: 1201 FECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELI-FNGEYVRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAF-------YHRDCFQCEICNASIANQAFQQKDGFRYCMPC 2004
            F C  C   L    Y  KD   +CV  +       C  C + I  + + +   ++ +H   F C  C  SL  +     D   +C  CY ++ +S C  C ++I      + +   +WH+ C VC  C   +     + ++    C  C++K     C  C K    G   +    + WH  CF+C  C+  +  ++F+  +    C  C++  +A +C  C + +   G+  G  F       +H +CF C  C+ S+  + F  ++   +C  C
Sbjct:    6 FYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGG--ITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPI--SGLT-GAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKC 276          
The following BLAST results are available for this feature:
BLAST of TCONS_00001465 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FHL54.331e-5934.20Four and a half LIM domains protein 5 OS=Homo sapi... [more]
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