TCONS_00001464 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001464
Unique NameTCONS_00001464
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2588

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001464 ID=TCONS_00001464|Name=TCONS_00001464|organism=Clytia hemisphaerica|type=transcript|length=2588bp
GTTTTTGTTGTTGATGAGCGTGTTTTGAAAGCAGAAAAAGGGGGTAAACG
ATCCCACTGCCAGGCGTGTGGTAAGATAATTGAACAGCAAAGTCTATGGT
AAAGATTTTACAACGCAGTAATAGTCGTAAAATAAAgAAATCAGTATTTG
AATTGTGAGCCGGACGAACACGGAAAAGGTATGGACGATATCATCGATTC
GTATAAAAAGAATCGGGAAAGTTTACACGATACAAACGAAAACATCGTAC
TTCATAATGGGCACGAGAGCGATCAATATATGTGGGTCCCGGCTGGACTA
GACGCTAATCTAATCGAAGATTACATGGCTTCTCTACCACGTCACAAAGT
TCCACATTTCAAGAATCCTGATGGCATCTCTTACCATAACAAACAACTTA
TCCAACAAATACCTCTACAAGATTCCAATTTCGAAAACATCTCCACTCTC
GAAGATGATGAACGACAAATTTTTAACGGATTTAAAAGAGAACGTGACTC
CCAAATGGATTCGGGCAAAGTCATAGTGGCAGATGATAATTATGTCTGTC
GAAAATGCGGAAAAGAAATCTACCAAGATGATTTACTAGTCAGGGCTTCA
GCCCTCGGAGAAGAAGCTGTCTGGCATCCAGGCTGTTTCGAATGTTGTAA
ATGCAACGAGCTGTTAGCAGATCTTATTTACTGCTACAAGGATGGTGATA
TTTTTTGCGTCCGCCATTTTGGAGAAGAGTTGAAACCAAGATGCTGTATG
TGTGACGAGCTCATTTTCAACGGCGAATACGTGCGTACGGACGAGAAAGC
ATACCACGCTCAACATTTCGTGTGTCATATctgtgaatgtagtttaacag
GAGAACAACATCTAGTTGACGATGGACTGCCCATCTGCATTGCTTGTTAT
GATGATAAATTTGCATCGGTTTGCCACAAGTGCAACAAATCTATCGGTGT
TGACGAAGAGGATGTCATTTACGATGACGAACATTGGCATGATTACTGTT
TAGTTTGTAGTCTTTGCAATTGCCGGTTAAGCGGTACAAGTTTTGTTATT
CGTGATGACAATTTCTTATGCTCGGATTGCTACCAAAAGACTGATGACAA
AAGATGTAAAACGTGCGGCAAAGGATTTGAACCGGGTGCCAAAAGgtTGG
AACTGAAAGGAGAATTTTGGCATGACACGTGTTTCGTATGTGATATCTGC
AAGTCACCTATCACGTCCAAGAAATTCATTCAACACGAAGGATCACAAGT
TTGTTGTCCGTGTTTCGATCAGAAATTCGCGAAACGTTGCGCGAAATGTG
AAGAGGTTTTACGCGAGGGAGGTGTAGCTTGCGGTGGAGCTTTCTATCAC
CGTGATTGCTTCCAATGCGAGATTTGTAACGCGTCCATCGCTAATCAAGC
TTTCCAACAGAAAGACGGATTCCGTTACTGCATGCCGTGTTACAAACAAC
AGTACGCCAAACGTTGCGCCGGTTGTGATAGTTATATAGTGAACGGAGAG
TACTATACTGTCGATTCAGATAGCTGGCATAAAGAGTGTTTCAAATGTGA
AGTTTGTCATATTGTTCTCCAACAACAAACGTTTGTTCAAGAGAATGGTA
AAGTTAAATTGGTATGTGAAAGCTGTCTTTAAACAAAGAAGTGCGTTGTG
GAATGTACCCTCTTCTTTGATTGGCTGTTGTAGAAGGGCCTACCAAGTGC
CGAAAAGAGAAGCTTTTGAATTCAACAAGGGTTTCATGGAGCTGATGGGT
CTTGTGCATTCATAAGATCTACCTACAACGCTGTAAAAAAGACTCTGTCG
ATTAAACCTAAGAACGCATTTATTATGAAAGAAGCCGCATAAAAAGAAAG
GAATATTTGGTATAGACAGACAAACTCATGAAGCATTATGGGAATGTTCT
ATGCGTTTAATCAATCCTGattcaaaaagtgaagaagtCAGGCATTGAAA
CTTACAAAATGAACCTTGCTTActtataaagtaaaaaaaaagtaataccT
TGAAGAAGTTTGACAAAATTGTAAATGAATAATGAACTGGAAAATTTCAC
ATTCATATTTCTCAAatggaagaaaaagaaattaactATTTTGTATTAAA
GGTTTTAATAGTATCATTAGTTgtcaattaattaattaattatgtTTTTG
TTTAACTAAAATGGTGCAGTCAGATGCTCAGGGAATATATTCCTTAGTTT
CTGTTAACTTGATTGTAAACTATCAAGGATGTAATCGTAACTTCGGCATA
GGCACCATAAACCTTGGGTTATCTGACTGTATTTTGCTTTTAACTGCACT
TTTTCTGTTAATTTTCTTATTACTTCACTTTAGATTCTTTAGAGTTTAAA
AGTTTGAGGGAAGGGGTTTCGGGGTTGTTGCAACCCATATTCAcacattg
tttttattattcCACATGATACACtttcaattaatttattttGTGTTATC
GTTAAATTATTTCGgttgtatttaattttttttttttttgcttttacatt
ttttttacatcTCTAACAATAAAATTCTCTATTCTTCTAAATCGGAAATG
ATAAAAATTCGATTAAAATTATCTGGATTTGTTGCAAC
Run BLAST on NCBI

transcript from alignment at sc0000010:371541..382295-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001464 ID=TCONS_00001464|Name=TCONS_00001464|organism=Clytia hemisphaerica|type=transcript|length=10755bp|location=Sequence derived from alignment at sc0000010:371541..382295- (Clytia hemisphaerica)
GTTTTTGTTGTTGATGAGCGTGTTTTGAAAGCAGAAAAAGGGGGTAAACG
ATCCCACTGCCAGGCGTGTGGTAAGATAATTGAACAGCAAAGTCTATGGT
AAAGATTTTACAACGCAGTAATAGTCGTAAAATAAAGGTAAACTTTTTGA
AATTGTAACTCTGTGGAGAATGGTTTTCTTCGACATTAGTGTTCCAGGAG
AAGGTAGATAATCTTGTTCAACACCTTTCTTACTACAATTATGGACAGAA
ATATTTGAGACAAACACTAGAAGTTACTTCAGAGATCCCTCTTTTTCCCA
AACTGCAATGTTCAGTGTGCGGTCGTCCCACCATTCATTGAACTTTGCAA
ATGGGGGGGGGGGGGGGGAAGAGCTGGGAGTTTAATTTTTTTCTCCTAAT
TTTTGTCCATGATTTTTACCCCTACTACAACACATTTCACATTTTTTTTT
TTTAAATGTTCAAAGAAAGTGATCAATACAATCATGGTCGAAATATATTG
AGATTTTAGTGTATTTTAACGTTTTTCACAATTTAAAGTTCGGGTGAGAA
CTGCTAGTTCCAAGCCTTATTAAAGCAAATTTGAGCTTTTAAATCCTGAG
ATCACACTTTCCAGCTGTAGTTGAACGTGTAGTTTTTAGTTCTCAGTGCA
TTGAGATATTGTTTTCAGCAAAGACTTTGAGACTTTGAGCCTTTGAGCCA
TTTGGGTTTAACTAAGATTGCTACGTATAGCTTTCGAGCTTGAATATCCA
TGCTAGTTCAAATGTAACGGGATTCAGGGTCATCCTTTTTGTTTACGTTT
CTAAGGGACGCGCAATATTATATTGACATTTAATAAGTCAGTAAGATGGG
AGTTCATTTTTTTGTACGTGAACTTTTTGTTTCTCTTTGATACTCATTCG
CTGATGTGTTTTTTTTGATGAATCAAAAAAATCAAATAAAAAAAGTCCTT
GAAAAGCTCTTAAACTTAAAAAAACTTTTATATTCAGTTAGATCTAACGT
CTACTTGATTTTCCTTTTGAGCTTAATTCGTCGGACATAGTAAATTCAAT
TCCCTTTGATGAGAACATAGATAAAATGTTTTTGTTTTCACTTGGGCTAG
TTAGTAGCTAGTAGCAGTACGTTTTAAGTTGGTTGGTCGGTCGGTCGTGT
GCAAAATTGTTTTTTGTCAAATTTTCTGTGTTTTGTGTTGACAAGACGGG
GTCGATTTTTTTGATAAAATTTCAAACAACCTTTTACAAGCTTAATATGT
AAATAAAAGAAAATACTGATCTCTCATTCTCTTTAGCTTTATTAAAAACT
TTCTATGTGAAGCTCTTAAACTTTTTCGTCCTCTAGGAATCTTGTAAAAA
GCGATAAAGGGTTGTTGTATGTTGTCGTCTTTAGGTGATTTATCTGGTAA
GTTTTGGTAAAAATCTTGAACGAGGAGAAATTGATTAAGGAAAGTCTTTT
AGTTTTCTTTCGATTTTGAATTATTTTTCGACTAAATCCTAAAGTAGTAC
ATAGCGTCAGCCCCCCCCTTTAACTGGATCAATTTTATGAAAGTGTCTAG
GGTCAAAAGTCCTGGGGGCTAACGAAAAATTCATAAATCTTTGGGGGACT
TAAAATTCAGGGGGGACCTAATTTTTGCCTGGGACCTAAACCCAGGCTGA
CGCTATGTAGTAGCGTGGTGGCAGGGGACAGGGGGCAGTGACAGCTTAGA
TAATGGCAATTTTCGACCAAAAATAGAGAAAAAAAACCACAAGTCTTGCA
AAAGCCAATTAGTACTAGTACTTCATTTAATACCTTCTGAAACTGAAAAT
GAACCCCGTATGGGAAAGGGTGAAAGATTTTGAAACTTCCCAAATATAGC
AAATATATATGACTCAACTCTTTGAGAGATTTAGAATATTTTTCATAATA
TTTTTCAAAGTTTCTTCTTATTCCTTTATACGCTGCCTGACCGCATTCAT
ATATATTCTTTATAAGGAATTCCCTTGATTCCAAGGGGAGAGGTAAAATA
ATCTCTTTCGTATGTTCTAATTAAGCCTTATGGTATCACTGTTCAAGGGT
TACATCAAATGAACAAAGCCCTACGATACTCGCCAATACCCAGCTGGCGC
ACAACGTTGTTTCGACGTTCATCTAAACTATATGCACGTTTTGAACGTTG
GATGAACGTTAAAATAACGTTGTGTGCAAGCTGAGCAGCTGTTAACCCAC
CCATGCTAAGAGGGTGTTTTCACTTGAAATCAAGCCAAAGTGAAGAAAAA
CACGAACAGGGCGAGAACTAGCATCTCATTGCCTTATATGTAGTTATCGA
ATTTATTATGCATTTTCAAATTTTGATATATAAACGTACTACTGACTTTA
GACTTGTAAATTTCAGTCAAAAACGGTAAGAACTAGTAAGATAATTTTCA
TTAACATTCTTAGAAGGCCAATAAAAATTGTTGCCTTTTGCACGTACTTT
AAGGAACACAAGTTGAAGAGTCCACACATCATATATTGTATGGTAGGTTA
TGATAGGTTACTTGTTAAGCCAACTCTACTTAAGATTGCCTTTGATCGAG
TTCAGATACATAGGAAAAATGTAATCGGAAATGTCTCTTGGGGTTCAGTT
TATAGTGTCAACGTATCCACATTCTCCGATGCTGACTTCATTGATACAGT
TGACGCATTCTAATTCGATTTTTAAGGGGAATAGGATTGTCATCGAATAA
GGGAGCGTATTGAATAGTAGAACGTCAAGTTAGAGAGCGTCAACTGTAGG
TATTCATTGAATTCCAAGCCCGAAAGGCTAGACTCGAGACTCTTGGATGG
GAAATGCAACCACTTATTTCCCATCCAGAACACCCGCGCGCTTACACAAA
CGCCGGATTAAAACTAAAATCTATTCCAGCGATTTCAGAAAATGCAGTCC
TCAAAAACAAAGGAACCGCTAGATACCATCCGTCGTCATTATTACGGCGC
CTTCTAGGCGCGTTTTGGATAAGAAATAAGTGGCTTCACTTTTTCTTGCC
TAGGATTCTACTCTAGCCCTTCGGGCTTTAAACTCAATGGGTATATTCCT
TCAACAAAAAATATTACAAAAGCTTATACCTTGGGTTATTAAACAATAAC
AAAAAAATCTGTCTGAAGGCAAAACATGTCCTACAAACTTTTATCAATGC
AAATTTTTTACTCACGTTGAAAAAAAATGTCTTATCTCGTCCTGAAGGCG
GACATGACAAATAGAGTATTTGGAAATGACTGTAATCTCATTGACGTCAC
GCATGCATCATTGTTAGAGTCAGCAGCGGAGTCATGCGCTCGCTTCATTC
TTTACATTGTTATGTTAGTGTTTATCGTTATTGTTTCCAATTTCTGTTAT
AACCAAACATGGATATATCCGTCTCAAACTGAATCGTTCTTTTTAGCGAG
GGATCGGAAATAAGGTATTAATTACAGAAAATTACTCTCGTTCCTAACAA
CCGTCTTTTACCAATTTGGATATTTTCTTTTCTTTTCTTTTTTGACTATC
TCTTGTTGAAGAGTGATTTCGTTGGTTTTGATATCAGAGGTGAATGGTCG
TAAATTTTTTTTTGCCAGACGAACGAAGTACTGTATATGCCCTTAAAGTG
CTATGATCTCTAATTTTATCGAGAAATATTTGTTTGGATTGTGTGTAGTA
TATACTGCAAAGTGTAATGTTTTTGTTTTTGTTTTGGCGTGCCACTCAAA
GGCTTAATAAAAAATCTTATAATGTGATTCCTTACACATTCTTAAACCGT
TTTATTTATCTTTTCTAGTGTAGTGTAGTGGGTGAGTTTCGATGTTAACA
AAAATCCTGTGAGAAAACTTTCAAGTTAAAGCGTTTTTTGTTGTTTTCGG
CTAATTCAACTTTATATTACAAGCTTTCATTTTCGTCATTTTTACGTTCT
CGCAATTTTTGATATAGTTGTTATGACTTTAGTTTGAAACAAGAGAGACA
AAAACTAGAAATATAATAGTTCTATNTGTTATGACTTTAGTTTGAAACAA
GAGAGACAAAAACTAGAAATATATTAGTTCTATATTGTTCTTGTTTTGTC
TTTTCAAATGATCTGGTCTGCCATCCACCAGCTTCTACATTTTTAAAGAC
TTTCTAGAAAAACTAAATAGAATTTGAAGTAACTTTTGCAAATAGTAATT
CGTAAAAATACTTTTTTCGGGTTTCTTTACTTTTGCTGCTCAGAACTTTT
TGGAAGCATTATACCTTATAGTTGTTAAGAAGTTTTTATAATCTTACTTG
CTTTTTAATCAAAACAAAGTTAATTCCATTCAAGTACTTATTTTGAGAGT
TCAGTGAGGATTTTAACGTCTTGTTATCTGATGTGATGCACACATATTTA
GGTTTTTCTTGTTTAAAATTCTTTCCTTATATCCTTATTTGGACTTTATT
GAAATTGCGAGGAGTTGATTTACTACGTCTATTTGGATTTATCTGAAACT
CGGAGAGATAAGATTTCTCTTGTTTCTCTGTTAAGCAATTGAGAAATTGG
AGTAGGCTTTCAAAAAGATTTTATCTTCANCTGTTTCTCTGTTAACCAAT
TGAGAAATTGGAGTAGGCTTTTAAAAAGGTTTTATCTTCATAACGGTTTC
ACTGCTTTTTTATTTCTTAAGATTTTCATTTAACTGTCTGAACAATCTAC
AACCACAATTTTTTCGGTTATTCTGTGTCTTTTTGGAAGATTTTAAAAAG
AAAAATTTTTTAATGCTAATTCAAATTACTATCATTGACAGAACTGGCGT
CCATCGCAACCTTCGACTAGTGGGAGACGGTGGATAAAAAGCTCTGTCCA
AGATTATAGATTAAACTTTTTTAACAGGTGTATGTACTAAAAACTTTTCT
CTCCATTTTCTCTCTTCAGAAATCAGTATTTGAATTGTGAGCCGGACGAA
CACGGAAAAGGTATGGACGATATCATCGATTCGTATAAAAAGAATCGGGA
AAGTTTACACGATACAAACGAAAACATCGTACTTCATAATGGGCACGAGA
GCGATCAATATATGTGGGTCCCGGCTGGACTAGACGCTAATCTAGTACGT
AAACCTTTTTATTGATTCTGGTTTTCTTACTTATCAAAATATTGAGCTTC
TCACTATTTTTAATAGGCGAGTTTATGTATCGGAGGATATCGAGGGCGAC
GGTAAGTGAAGTCGACGCAAAACAAAGTCGATAGTTGGTATACAGCTCTA
TATCGCCTTTACTCACCTAAACAGACGACGGTATTATGGGTGTTTTTACC
GTTGTCGAGTAAAATGGACTTTGCTTTATATCGTCTCCTAGAATTTATCT
CACACTAATTCGCTATTAAGTGACATCAGGCCTTTGGATCTGCTAGTTTC
GAAATCTTGACGAAACACTGTGGTCTAAGATTAAGGTCTGTAGCCTAGAA
AAAAATAGGATATCTCTTATATCTAGCATTCTAGTCTATCTGAAGTATGT
TTGTAACAGCGGATATATCAAATCGCTTTGCTAAGCATGATTTTCATACT
ATTTCTGGCCATGTTTTTTTGAAAACGACTTCCACATTTTGAAGTTCCTG
ATCCTGTTTTTGTTTTTGTTTTGAATTCCGAGGCTTATGATGTGAGGTCC
TCATAACCACGTGCGTTTACAATAGGATATTATTGGTGGTCGATAGTTTA
CGTCGAAACTCTCCCGGCTATTGACTTTCAAACTCAACATAGTATTTTCA
TACGCAGACCATTTTATTTACCAGTGAACCTTGTTATTTCGGAGAAAACT
ATCCAAGGTTCTAACATTTACTTAAAGATTAATGCAATAAACTAAAATTA
TTCTAAAAAAATCTATTTTCACCTTTAAACAGATCGAAGATTACATGGCT
TCTCTACCACGTCACAAAGTTCCACATTTCAAGAATCCTGATGGCATCTC
TTACCATAACAAACAACTTATCCAACAAATACCTCTACAAGATTCCAATT
TCGAAAACATCTCCACTCTCGAAGATGATGAACGACAAATTTTTAACGGA
TTTAAAAGAGAACGTGACTCCCAAATGGATTCGGGCAAAGTCATAGTGGC
AGATGATAATTATGTAAGCTTAAAGTTTGGTTTCATACAGTTAAAACCTT
CTTCTTGTCATTTACCCTAAAGTTTTCATAATGCATTTTTATTTCAGTCT
TTTACCTTTCAGCCTTTCGATTTTAACTGACTTGACAGAAAGTTATTGTA
GATGGTGAATAAGATGATCATTTTGTTATTATTGAATCCTTATTAGGTCT
GTCGAAAATGCGGAAAAGAAATCTACCAAGATGATTTACTAGTCAGGGCT
TCAGCCCTCGGAGAAGAAGCTGTCTGGCATCCAGGCTGTTTCGAATGTTG
TAAATGCAACGAGCTGTTAGCAGATCTTATTTACTGCTACAAGGATGGTG
ATATTTTTTGCGTCCGCCATTTTGGAGAAGAGTTGAAACCAAGATGCTGT
ATGTGTGACGAGGTTGGTCATTGTTCGCTTTTCACTGTTCATTTTACACG
CGAGGAATCGGATTTTCATAAATTACCTCGCGAGCAACGCTTACCTCGTT
TTAAAGAATTGCTATGGTAATTGTTTCCCGGAGGAGTTCATAAGAAGTCT
AAAACGAGGCAGTCGTTGTACTCGAAATAATTCATGAAAAAGGTCTATTT
ATTTCTCGTGAACCCGTGCTTTGAAGGTAAAAGTGAGAATAATATGTAGT
ACTCTCAGGTACCTAACAAACGGGAAGGAGCTGGGAAAATTCTTCGAAAT
TCAATAAAGGGGGGAGGTGGTACCTCATTGTGGGGGGGGGGGGGACCTAA
TTTCCGGGGGTTTGAAATTGTACATCTAAGTTCCCCAAATATTTTCAAAT
TTAATTTAAGGGGGTCCTAATAAGGTCCTGGGGAAAATTATCGAAAAATG
AACGAAAAAATTAACAAGCGGGGAAGCGTTTATGATGCACATAAGTAGTA
ATGTGAAAAAGAGTATCACTTTTTTTCTGAAGCAAATAAAAATGTTTCAA
TTAAACGTTGATCTAGTATAATACGGTATCAAATTACTTTCCGGCAGCCT
GTCTATAATAGGCGGCCGCCTATCTTACCGTTTCTGGTCTGAAATTTATT
TTCAAATCGTAGGTAGCCGCTCTTTATAATGAAATTTCAGGCGGCTGCTT
CACTTTACTCAGGCGGCCGCCTAATTTTAATTCGCATCTTCGACATGAAA
AAACAAACAAAATGGCTTCAACGAATTTAGAGGTACAAAGATGCTCCTGT
CTTTGACTTCAATAAGGTAAACTAAACGTTTTTATTGTTTTATTTTTCTA
ATGGAAGGAGAGACCGGAATCTTTTCCTTATTCTTCAGCTCAACAGCATT
GAAAATGCTGAATCCTGCTGCAAAGAAGAAAAAAAAAGTTACTGTGCAGT
GAAGGTGAAGCGAGGGATCAGCTGTTGCACAGCAAAAAGTTACCATTTTG
TTAGATTTCGACAGGCGGCCGCCTGGGTTGAGACAACAAAATAACAGACC
AGAATATTATCAAGATAGGCGGCCACCTTACCTAAAACGTTAAGTCAGGC
GGCCGCTTAAGATTTCAGGCAGCCGCCTGACCTTTACTGCCCATCCAAGA
TAGGGACAGGGTTGGCCATATCAGCCACGGTATTATTCTTTTGCGGTCGG
TCCATCTGTTATTGTTTGTAATGACCTCTTAAATAGTGTTTTTGAAATTA
AGGATTCAAAAATAATTTGATTCTCGTGTATAAACTAATGGGCTAAATTA
AGATTATGACTACATATGTCGTAATTTCTCATAAATCTGATAATCATTTC
GTTATATAGTTGAGCTTTTCAAATCCTTTGTCCCTTTTTCCCAAATGATA
TTAATGCTCTACTCTACTACGTTTATAGCAATTTTCAAGAATAGAGCAAT
GGCTTGGTAATAAAAGATGACCAAGACCATTTAAAAATTTAGGATATCTC
TAAGAGCGTCAAATTTTTCCTTTTTTTTAGTTTTTAGTTTTGATTTTTGG
CCCAAATATACCTGTCACAAAGTACTAAACCCCATCCCCTAGGGATAGCA
TTATTACAACAGGAAGTTGAAAACAATCCAACATTTAAAAATTTATTTTC
TCATTCCAGCTCATTTTCAACGGCGAATACGTGCGTACGGACGAGAAAGC
ATACCACGCTCAACATTTCGTGTGTCATATCTGTGAATGTAGTTTAACAG
GAGAACAACATCTAGTTGACGATGGACTGCCCATCTGCATTGCTTGTTAT
GATGATAAATTTGCATCGGTTTGCCACAAGTGCAACAAATCTATCGGTAA
GATTCTCAGTTTGGTAAAAGTGGCTAAAAATATATTAGCTTTTTTTTTTC
CTTTTTGTATTGACTGGTTGGGACAACTTGATTTTTTTTTACTTTTCTTG
TGATTTAGTTGATCATGCCCAACAATGACATTGTTTCATTGACAAATTTT
TTTAAATATATTTCATAAAATGCTAGGCACTTATAGCGGTGACAGGAAAA
CTGCCTGCCTAAATTCACCCTCTAAAATTACCTAAAGTCTACTGATCGTT
ATGTTTTCATTTCTGGTTGACAGTCCACACTGGGCTTTGAATGTTTCGAA
ATGCAAGCATTCGCTACATTGTAGTCGTAGTTATGGAATAAACTTTATAT
AACTCCATAACTCGAACATACAGGGAACACAGTTATTTCAAGTTAAGGAG
GTTCGAGTTACAGATATCCCAATGTATTATGGAAGAGGGTATTTAGCGCA
GATATCATAAAACAACTTTTCTTTTTCATTCAAACAGGTGTTGACGAAGA
GGATGTCATTTACGATGACGAACATTGGCATGATTACTGTTTAGTTTGTA
GTCTTTGCAATTGCCGGTTAAGCGGTACAAGTTTTGTTATTCGTGATGAC
AATTTCTTATGCTCGGATTGCTACCAAAAGACTGATGACAAAAGATGTAA
AACGTGCGGCAAAGGATTTGAACCGGGTGCCAAAAGGTTTGTAAAGTTTT
TGTGACAGCGTAACCTATGCTTATTTTTTCATTCGGGTCGGAGATAAGAT
TTGGCGAACCAAAAATGTCGAAAAAATTTTCGGATTTATTATTTTAGCGA
ATCTGCGTTTAAAAAAAAAAATCCCAGATTTCGCGACTCGTTAATTTCGT
TAACAAAGGCCCTTAAACCGCCAATTTTCGTCAAAATTAGTAGATTCACA
GTGTATTTTATACCGAAAATCTTTTTTCGCGAGTTAACGATTCCAGGTGA
TTACTAAATAAATTCGAAAGCTTTAAATTTGTTTACACTTTCTTACTCTT
TTAAATTTTCAGGTTGGAACTGAAAGGAGAATTTTGGCATGACACGTGTT
TCGTATGTGATATCTGCAAGTCACCTATCACGTCCAAGAAATTCATTCAA
CACGAAGGATCACAAGTTTGTTGTCCGTGTTTCGATCAGAAATTCGCGAA
ACGTTGCGCGAAATGTGAAGAGGTTTTACGCGAGGGAGGTGTAGCTTGCG
GTGGAGCTTTCTATCACCGTGATTGCTTCCAATGCGAGATTTGTAACGCG
TCCATCGCTAATCAAGCTTTCCAACAGAAAGACGGATTCCGTTACTGCAT
GCCGTGTTACAAACAACAGTACGCCAAACGTTGCGCCGGTTGTGATAGTT
ATATAGTGAACGGAGAGTACTATACTGTCGATTCAGATAGCTGGCATAAA
GAGTGTTTCAAATGTGAAGTTTGTCATATTGTTCTCCAACAACAAACGTT
TGTTCAAGAGAATGGTAAAGTTAAATTGGTATGTGAAAGCTGTCTTTAAA
CAAAGAAGTGCGTTGTGGAATGTACCCTCTTCTTTGATTGGCTGTTGTAG
AAGGGCCTACCAAGTGCCGAAAAGAGAAGCTTTTGAATTCAACAAGGGTT
TCATGGAGCTGATGGGTCTTGTGCATTCATAAGATCTACCTACAACGCTG
TAAAAAAGACTCTGTCGATTAAACCTAAGAACGCATTTATTATGAAAGAA
GCCGCATAAAAAGAAAGGAATATTTGGTATAGACAGACAAACTCATGAAG
CATTATGGGAATGTTCTATGCGTTTAATCAATCCTGATTCAAAAAGTGAA
GAAGTCAGGCATTGAAACTTACAAAATGAACCTTGCTTACTTATAAAGTA
AAAAAAAAGTAATACCTTGAAGAAGTTTGACAAAATTGTAAATGAATAAT
GAACTGGAAAATTTCACATTCATATTTCTCAAATGGAAGAAAAAGAAATT
AACTATTTTGTATTAAAGGTTTTAATAGTATCATTAGTTGTCAATTAATT
AATTAATTATGTTTTTGTTTAACTAAAATGGTGCAGTCAGATGCTCAGGG
AATATATTCCTTAGTTTCTGTTAACTTGATTGTAAACTATCAAGGATGTA
ATCGTAACTTCGGCATAGGCACCATAAACCTTGGGTTATCTGACTGTATT
TTGCTTTTAACTGCACTTTTTCTGTTAATTTTCTTATTACTTCACTTTAG
ATTCTTTAGAGTTTAAAAGTTTGAGGGAAGGGGTTTCGGGGTTGTTGCAA
CCCATATTCACACATTGTTTTTATTATTCCACATGATACACTTTCAATTA
ATTTATTTTGTGTTATCGTTAAATTATTTCGGTTGTATTTAATTTTTTTT
TTTTTTGCTTTTACATTTTTTTTACATCTCTAACAATAAAATTCTCTATT
CTTCTAAATCGGAAATGATAAAAATTCGATTAAAATTATCTGGATTTGTT
GCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000750XLOC_000750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001464-exon-sc0000010-1575043694:382159..382295TCONS_00001464-exon-sc0000010-1575043694:382159..382295Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1575043694:377252..377426TCONS_00001464-exon-sc0000010-1575043694:377252..377426Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1575043694:376233..376463TCONS_00001464-exon-sc0000010-1575043694:376233..376463Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1575043694:375834..376049TCONS_00001464-exon-sc0000010-1575043694:375834..376049Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1575043694:374000..374186TCONS_00001464-exon-sc0000010-1575043694:374000..374186Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1575043694:373310..373508TCONS_00001464-exon-sc0000010-1575043694:373310..373508Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1575043694:371541..372983TCONS_00001464-exon-sc0000010-1575043694:371541..372983Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1510915933:382159..382295TCONS_00001464-exon-sc0000010-1510915933:382159..382295Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1510915933:377252..377426TCONS_00001464-exon-sc0000010-1510915933:377252..377426Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1510915933:376233..376463TCONS_00001464-exon-sc0000010-1510915933:376233..376463Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1510915933:375834..376049TCONS_00001464-exon-sc0000010-1510915933:375834..376049Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1510915933:374000..374186TCONS_00001464-exon-sc0000010-1510915933:374000..374186Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1510915933:373310..373508TCONS_00001464-exon-sc0000010-1510915933:373310..373508Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1510915933:371541..372983TCONS_00001464-exon-sc0000010-1510915933:371541..372983Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1491911889:382159..382295TCONS_00001464-exon-sc0000010-1491911889:382159..382295Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1491911889:377252..377426TCONS_00001464-exon-sc0000010-1491911889:377252..377426Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1491911889:376233..376463TCONS_00001464-exon-sc0000010-1491911889:376233..376463Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1491911889:375834..376049TCONS_00001464-exon-sc0000010-1491911889:375834..376049Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1491911889:374000..374186TCONS_00001464-exon-sc0000010-1491911889:374000..374186Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1491911889:373310..373508TCONS_00001464-exon-sc0000010-1491911889:373310..373508Clytia hemisphaericaexon
TCONS_00001464-exon-sc0000010-1491911889:371541..372983TCONS_00001464-exon-sc0000010-1491911889:371541..372983Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:371541..382295 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	5.02139e-08	0	0	2.92865	3.86619	20.0524	15.3546	8.31292	7.39039	8.75673	6.16751	15.7813	16.2598	9.57704	8.98807	4.79439	2.95027	25.9238	23.2873	1.79584	2.459	4.29998	2.27042	3.40655	5.81929	10.879	12.4285	6.99213	10.1903
Blast
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BLAST of TCONS_00001464 vs. Swiss-Prot (Human)
Match: FHL5 (Four and a half LIM domains protein 5 OS=Homo sapiens GN=FHL5 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.208e-60
Identity = 92/269 (34.20%), Postives = 146/269 (54.28%), Query Frame = 1 
Query:  808 AQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAFYHRDCFQCEICNASIANQAFQQKDGFRYCMPCYKQQYAKRCAGCD---SYIVNGEYYTVDSDSWHKECFKCEVCHIVLQQQTFVQENGKV 1605
              HF C  C  SL G+++++ D  P C+ CYD  F++ C +C K I  D +D+ Y D HWH+ C  C+ CN  L    F  +D+  LC++CY      +C  C +   PG++++E KG +WH+TCFVC+ C+ PI +K  I  E    C PCF+++FA  C  C++V+  GG+      +H++CF C  C   +  + F  +D + +C+ CY   YA +C  C    S +   ++       WH ECF C  C + L  + F+ +N ++
Sbjct:    3 TAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEI 271

HSP 2 Score: 97.4413 bits (241), Expect = 9.352e-22
Identity = 62/214 (28.97%), Postives = 89/214 (41.59%), Query Frame = 1 
Query:  622 WHPGCFECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELIFNGEY-VRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFE--PGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVC 1254
            WH GCF+C KCN  L +  +  KD  + C   +  E   +C  C   I  G   +      +H   FVC  C   +  +  +  +    C+ C++ +FA  C+ C K I      + + D+ WH  C +CS C   L    F+ RDD   C DCY      +C  C K      GAK +  +   WH  CF C  C   +  K F+       C
Sbjct:   62 WHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVI--TSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFC 273

HSP 3 Score: 88.5817 bits (218), Expect = 7.046e-19
Identity = 63/276 (22.83%), Postives = 113/276 (40.94%), Query Frame = 1 
Query:  637 FECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELI-FNGEYVRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAF-------YHRDCFQCEICNASIANQAFQQKDGFRYCMPC 1440
            F C  C   L    Y  KD   +CV  +       C  C + I  + + +   ++ +H   F C  C  SL  +     D   +C  CY ++ +S C  C ++I      + +   +WH+ C VC  C   +     + ++    C  C++K     C  C K    G   +    + WH  CF+C  C+  +  ++F+  +    C  C++  +A +C  C + +   G+  G  F       +H +CF C  C+ S+  + F  ++   +C  C
Sbjct:    6 FYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGG--ITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPI--SGLT-GAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKC 276
The following BLAST results are available for this feature:
BLAST of TCONS_00001464 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FHL59.208e-6034.20Four and a half LIM domains protein 5 OS=Homo sapi... [more]
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