TCONS_00001463 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001463
Unique NameTCONS_00001463
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2527

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001463 ID=TCONS_00001463|Name=TCONS_00001463|organism=Clytia hemisphaerica|type=transcript|length=2527bp
CTTTTTCGTCCTCTAGGAATCTTGTAAAAAGCGATAAAGGGTTGTTGTAT
GTTGTCGTCTTTAGGTGATTTATCTGAAATCAGTATTTGAATTGTGAGCC
GGACGAACACGGAAAAGGTATGGACGATATCATCGATTCGTATAAAAAGA
ATCGGGAAAGTTTACACGATACAAACGAAAACATCGTACTTCATAATGGG
CACGAGAGCGATCAATATATGTGGGTCCCGGCTGGACTAGACGCTAATCT
AATCGAAGATTACATGGCTTCTCTACCACGTCACAAAGTTCCACATTTCA
AGAATCCTGATGGCATCTCTTACCATAACAAACAACTTATCCAACAAATA
CCTCTACAAGATTCCAATTTCGAAAACATCTCCACTCTCGAAGATGATGA
ACGACAAATTTTTAACGGATTTAAAAGAGAACGTGACTCCCAAATGGATT
CGGGCAAAGTCATAGTGGCAGATGATAATTATGTCTGTCGAAAATGCGGA
AAAGAAATCTACCAAGATGATTTACTAGTCAGGGCTTCAGCCCTCGGAGA
AGAAGCTGTCTGGCATCCAGGCTGTTTCGAATGTTGTAAATGCAACGAGC
TGTTAGCAGATCTTATTTACTGCTACAAGGATGGTGATATTTTTTGCGTC
CGCCATTTTGGAGAAGAGTTGAAACCAAGATGCTGTATGTGTGACGAGCT
CATTTTCAACGGCGAATACGTGCGTACGGACGAGAAAGCATACCACGCTC
AACATTTCGTGTGTCATATctgtgaatgtagtttaacagGAGAACAACAT
CTAGTTGACGATGGACTGCCCATCTGCATTGCTTGTTATGATGATAAATT
TGCATCGGTTTGCCACAAGTGCAACAAATCTATCGGTGTTGACGAAGAGG
ATGTCATTTACGATGACGAACATTGGCATGATTACTGTTTAGTTTGTAGT
CTTTGCAATTGCCGGTTAAGCGGTACAAGTTTTGTTATTCGTGATGACAA
TTTCTTATGCTCGGATTGCTACCAAAAGACTGATGACAAAAGATGTAAAA
CGTGCGGCAAAGGATTTGAACCGGGTGCCAAAAGgtTGGAACTGAAAGGA
GAATTTTGGCATGACACGTGTTTCGTATGTGATATCTGCAAGTCACCTAT
CACGTCCAAGAAATTCATTCAACACGAAGGATCACAAGTTTGTTGTCCGT
GTTTCGATCAGAAATTCGCGAAACGTTGCGCGAAATGTGAAGAGGTTTTA
CGCGAGGGAGGTGTAGCTTGCGGTGGAGCTTTCTATCACCGTGATTGCTT
CCAATGCGAGATTTGTAACGCGTCCATCGCTAATCAAGCTTTCCAACAGA
AAGACGGATTCCGTTACTGCATGCCGTGTTACAAACAACAGTACGCCAAA
CGTTGCGCCGGTTGTGATAGTTATATAGTGAACGGAGAGTACTATACTGT
CGATTCAGATAGCTGGCATAAAGAGTGTTTCAAATGTGAAGTTTGTCATA
TTGTTCTCCAACAACAAACGTTTGTTCAAGAGAATGGTAAAGTTAAATTG
GTATGTGAAAGCTGTCTTTAAACAAAGAAGTGCGTTGTGGAATGTACCCT
CTTCTTTGATTGGCTGTTGTAGAAGGGCCTACCAAGTGCCGAAAAGAGAA
GCTTTTGAATTCAACAAGGGTTTCATGGAGCTGATGGGTCTTGTGCATTC
ATAAGATCTACCTACAACGCTGTAAAAAAGACTCTGTCGATTAAACCTAA
GAACGCATTTATTATGAAAGAAGCCGCATAAAAAGAAAGGAATATTTGGT
ATAGACAGACAAACTCATGAAGCATTATGGGAATGTTCTATGCGTTTAAT
CAATCCTGattcaaaaagtgaagaagtCAGGCATTGAAACTTACAAAATG
AACCTTGCTTActtataaagtaaaaaaaaagtaataccTTGAAGAAGTTT
GACAAAATTGTAAATGAATAATGAACTGGAAAATTTCACATTCATATTTC
TCAAatggaagaaaaagaaattaactATTTTGTATTAAAGGTTTTAATAG
TATCATTAGTTgtcaattaattaattaattatgtTTTTGTTTAACTAAAA
TGGTGCAGTCAGATGCTCAGGGAATATATTCCTTAGTTTCTGTTAACTTG
ATTGTAAACTATCAAGGATGTAATCGTAACTTCGGCATAGGCACCATAAA
CCTTGGGTTATCTGACTGTATTTTGCTTTTAACTGCACTTTTTCTGTTAA
TTTTCTTATTACTTCACTTTAGATTCTTTAGAGTTTAAAAGTTTGAGGGA
AGGGGTTTCGGGGTTGTTGCAACCCATATTCAcacattgtttttattatt
cCACATGATACACtttcaattaatttattttGTGTTATCGTTAAATTATT
TCGgttgtatttaattttttttttttttgcttttacattttttttacatc
TCTAACAATAAAATTCTCTATTCTTCTAAATCGGAAATGATAAAAATTCG
ATTAAAATTATCTGGATTTGTTGCAAC
Run BLAST on NCBI

transcript from alignment at sc0000010:371541..380975-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001463 ID=TCONS_00001463|Name=TCONS_00001463|organism=Clytia hemisphaerica|type=transcript|length=9435bp|location=Sequence derived from alignment at sc0000010:371541..380975- (Clytia hemisphaerica)
CTTTTTCGTCCTCTAGGAATCTTGTAAAAAGCGATAAAGGGTTGTTGTAT
GTTGTCGTCTTTAGGTGATTTATCTGGTAAGTTTTGGTAAAAATCTTGAA
CGAGGAGAAATTGATTAAGGAAAGTCTTTTAGTTTTCTTTCGATTTTGAA
TTATTTTTCGACTAAATCCTAAAGTAGTACATAGCGTCAGCCCCCCCCTT
TAACTGGATCAATTTTATGAAAGTGTCTAGGGTCAAAAGTCCTGGGGGCT
AACGAAAAATTCATAAATCTTTGGGGGACTTAAAATTCAGGGGGGACCTA
ATTTTTGCCTGGGACCTAAACCCAGGCTGACGCTATGTAGTAGCGTGGTG
GCAGGGGACAGGGGGCAGTGACAGCTTAGATAATGGCAATTTTCGACCAA
AAATAGAGAAAAAAAACCACAAGTCTTGCAAAAGCCAATTAGTACTAGTA
CTTCATTTAATACCTTCTGAAACTGAAAATGAACCCCGTATGGGAAAGGG
TGAAAGATTTTGAAACTTCCCAAATATAGCAAATATATATGACTCAACTC
TTTGAGAGATTTAGAATATTTTTCATAATATTTTTCAAAGTTTCTTCTTA
TTCCTTTATACGCTGCCTGACCGCATTCATATATATTCTTTATAAGGAAT
TCCCTTGATTCCAAGGGGAGAGGTAAAATAATCTCTTTCGTATGTTCTAA
TTAAGCCTTATGGTATCACTGTTCAAGGGTTACATCAAATGAACAAAGCC
CTACGATACTCGCCAATACCCAGCTGGCGCACAACGTTGTTTCGACGTTC
ATCTAAACTATATGCACGTTTTGAACGTTGGATGAACGTTAAAATAACGT
TGTGTGCAAGCTGAGCAGCTGTTAACCCACCCATGCTAAGAGGGTGTTTT
CACTTGAAATCAAGCCAAAGTGAAGAAAAACACGAACAGGGCGAGAACTA
GCATCTCATTGCCTTATATGTAGTTATCGAATTTATTATGCATTTTCAAA
TTTTGATATATAAACGTACTACTGACTTTAGACTTGTAAATTTCAGTCAA
AAACGGTAAGAACTAGTAAGATAATTTTCATTAACATTCTTAGAAGGCCA
ATAAAAATTGTTGCCTTTTGCACGTACTTTAAGGAACACAAGTTGAAGAG
TCCACACATCATATATTGTATGGTAGGTTATGATAGGTTACTTGTTAAGC
CAACTCTACTTAAGATTGCCTTTGATCGAGTTCAGATACATAGGAAAAAT
GTAATCGGAAATGTCTCTTGGGGTTCAGTTTATAGTGTCAACGTATCCAC
ATTCTCCGATGCTGACTTCATTGATACAGTTGACGCATTCTAATTCGATT
TTTAAGGGGAATAGGATTGTCATCGAATAAGGGAGCGTATTGAATAGTAG
AACGTCAAGTTAGAGAGCGTCAACTGTAGGTATTCATTGAATTCCAAGCC
CGAAAGGCTAGACTCGAGACTCTTGGATGGGAAATGCAACCACTTATTTC
CCATCCAGAACACCCGCGCGCTTACACAAACGCCGGATTAAAACTAAAAT
CTATTCCAGCGATTTCAGAAAATGCAGTCCTCAAAAACAAAGGAACCGCT
AGATACCATCCGTCGTCATTATTACGGCGCCTTCTAGGCGCGTTTTGGAT
AAGAAATAAGTGGCTTCACTTTTTCTTGCCTAGGATTCTACTCTAGCCCT
TCGGGCTTTAAACTCAATGGGTATATTCCTTCAACAAAAAATATTACAAA
AGCTTATACCTTGGGTTATTAAACAATAACAAAAAAATCTGTCTGAAGGC
AAAACATGTCCTACAAACTTTTATCAATGCAAATTTTTTACTCACGTTGA
AAAAAAATGTCTTATCTCGTCCTGAAGGCGGACATGACAAATAGAGTATT
TGGAAATGACTGTAATCTCATTGACGTCACGCATGCATCATTGTTAGAGT
CAGCAGCGGAGTCATGCGCTCGCTTCATTCTTTACATTGTTATGTTAGTG
TTTATCGTTATTGTTTCCAATTTCTGTTATAACCAAACATGGATATATCC
GTCTCAAACTGAATCGTTCTTTTTAGCGAGGGATCGGAAATAAGGTATTA
ATTACAGAAAATTACTCTCGTTCCTAACAACCGTCTTTTACCAATTTGGA
TATTTTCTTTTCTTTTCTTTTTTGACTATCTCTTGTTGAAGAGTGATTTC
GTTGGTTTTGATATCAGAGGTGAATGGTCGTAAATTTTTTTTTGCCAGAC
GAACGAAGTACTGTATATGCCCTTAAAGTGCTATGATCTCTAATTTTATC
GAGAAATATTTGTTTGGATTGTGTGTAGTATATACTGCAAAGTGTAATGT
TTTTGTTTTTGTTTTGGCGTGCCACTCAAAGGCTTAATAAAAAATCTTAT
AATGTGATTCCTTACACATTCTTAAACCGTTTTATTTATCTTTTCTAGTG
TAGTGTAGTGGGTGAGTTTCGATGTTAACAAAAATCCTGTGAGAAAACTT
TCAAGTTAAAGCGTTTTTTGTTGTTTTCGGCTAATTCAACTTTATATTAC
AAGCTTTCATTTTCGTCATTTTTACGTTCTCGCAATTTTTGATATAGTTG
TTATGACTTTAGTTTGAAACAAGAGAGACAAAAACTAGAAATATAATAGT
TCTATNTGTTATGACTTTAGTTTGAAACAAGAGAGACAAAAACTAGAAAT
ATATTAGTTCTATATTGTTCTTGTTTTGTCTTTTCAAATGATCTGGTCTG
CCATCCACCAGCTTCTACATTTTTAAAGACTTTCTAGAAAAACTAAATAG
AATTTGAAGTAACTTTTGCAAATAGTAATTCGTAAAAATACTTTTTTCGG
GTTTCTTTACTTTTGCTGCTCAGAACTTTTTGGAAGCATTATACCTTATA
GTTGTTAAGAAGTTTTTATAATCTTACTTGCTTTTTAATCAAAACAAAGT
TAATTCCATTCAAGTACTTATTTTGAGAGTTCAGTGAGGATTTTAACGTC
TTGTTATCTGATGTGATGCACACATATTTAGGTTTTTCTTGTTTAAAATT
CTTTCCTTATATCCTTATTTGGACTTTATTGAAATTGCGAGGAGTTGATT
TACTACGTCTATTTGGATTTATCTGAAACTCGGAGAGATAAGATTTCTCT
TGTTTCTCTGTTAAGCAATTGAGAAATTGGAGTAGGCTTTCAAAAAGATT
TTATCTTCANCTGTTTCTCTGTTAACCAATTGAGAAATTGGAGTAGGCTT
TTAAAAAGGTTTTATCTTCATAACGGTTTCACTGCTTTTTTATTTCTTAA
GATTTTCATTTAACTGTCTGAACAATCTACAACCACAATTTTTTCGGTTA
TTCTGTGTCTTTTTGGAAGATTTTAAAAAGAAAAATTTTTTAATGCTAAT
TCAAATTACTATCATTGACAGAACTGGCGTCCATCGCAACCTTCGACTAG
TGGGAGACGGTGGATAAAAAGCTCTGTCCAAGATTATAGATTAAACTTTT
TTAACAGGTGTATGTACTAAAAACTTTTCTCTCCATTTTCTCTCTTCAGA
AATCAGTATTTGAATTGTGAGCCGGACGAACACGGAAAAGGTATGGACGA
TATCATCGATTCGTATAAAAAGAATCGGGAAAGTTTACACGATACAAACG
AAAACATCGTACTTCATAATGGGCACGAGAGCGATCAATATATGTGGGTC
CCGGCTGGACTAGACGCTAATCTAGTACGTAAACCTTTTTATTGATTCTG
GTTTTCTTACTTATCAAAATATTGAGCTTCTCACTATTTTTAATAGGCGA
GTTTATGTATCGGAGGATATCGAGGGCGACGGTAAGTGAAGTCGACGCAA
AACAAAGTCGATAGTTGGTATACAGCTCTATATCGCCTTTACTCACCTAA
ACAGACGACGGTATTATGGGTGTTTTTACCGTTGTCGAGTAAAATGGACT
TTGCTTTATATCGTCTCCTAGAATTTATCTCACACTAATTCGCTATTAAG
TGACATCAGGCCTTTGGATCTGCTAGTTTCGAAATCTTGACGAAACACTG
TGGTCTAAGATTAAGGTCTGTAGCCTAGAAAAAAATAGGATATCTCTTAT
ATCTAGCATTCTAGTCTATCTGAAGTATGTTTGTAACAGCGGATATATCA
AATCGCTTTGCTAAGCATGATTTTCATACTATTTCTGGCCATGTTTTTTT
GAAAACGACTTCCACATTTTGAAGTTCCTGATCCTGTTTTTGTTTTTGTT
TTGAATTCCGAGGCTTATGATGTGAGGTCCTCATAACCACGTGCGTTTAC
AATAGGATATTATTGGTGGTCGATAGTTTACGTCGAAACTCTCCCGGCTA
TTGACTTTCAAACTCAACATAGTATTTTCATACGCAGACCATTTTATTTA
CCAGTGAACCTTGTTATTTCGGAGAAAACTATCCAAGGTTCTAACATTTA
CTTAAAGATTAATGCAATAAACTAAAATTATTCTAAAAAAATCTATTTTC
ACCTTTAAACAGATCGAAGATTACATGGCTTCTCTACCACGTCACAAAGT
TCCACATTTCAAGAATCCTGATGGCATCTCTTACCATAACAAACAACTTA
TCCAACAAATACCTCTACAAGATTCCAATTTCGAAAACATCTCCACTCTC
GAAGATGATGAACGACAAATTTTTAACGGATTTAAAAGAGAACGTGACTC
CCAAATGGATTCGGGCAAAGTCATAGTGGCAGATGATAATTATGTAAGCT
TAAAGTTTGGTTTCATACAGTTAAAACCTTCTTCTTGTCATTTACCCTAA
AGTTTTCATAATGCATTTTTATTTCAGTCTTTTACCTTTCAGCCTTTCGA
TTTTAACTGACTTGACAGAAAGTTATTGTAGATGGTGAATAAGATGATCA
TTTTGTTATTATTGAATCCTTATTAGGTCTGTCGAAAATGCGGAAAAGAA
ATCTACCAAGATGATTTACTAGTCAGGGCTTCAGCCCTCGGAGAAGAAGC
TGTCTGGCATCCAGGCTGTTTCGAATGTTGTAAATGCAACGAGCTGTTAG
CAGATCTTATTTACTGCTACAAGGATGGTGATATTTTTTGCGTCCGCCAT
TTTGGAGAAGAGTTGAAACCAAGATGCTGTATGTGTGACGAGGTTGGTCA
TTGTTCGCTTTTCACTGTTCATTTTACACGCGAGGAATCGGATTTTCATA
AATTACCTCGCGAGCAACGCTTACCTCGTTTTAAAGAATTGCTATGGTAA
TTGTTTCCCGGAGGAGTTCATAAGAAGTCTAAAACGAGGCAGTCGTTGTA
CTCGAAATAATTCATGAAAAAGGTCTATTTATTTCTCGTGAACCCGTGCT
TTGAAGGTAAAAGTGAGAATAATATGTAGTACTCTCAGGTACCTAACAAA
CGGGAAGGAGCTGGGAAAATTCTTCGAAATTCAATAAAGGGGGGAGGTGG
TACCTCATTGTGGGGGGGGGGGGGACCTAATTTCCGGGGGTTTGAAATTG
TACATCTAAGTTCCCCAAATATTTTCAAATTTAATTTAAGGGGGTCCTAA
TAAGGTCCTGGGGAAAATTATCGAAAAATGAACGAAAAAATTAACAAGCG
GGGAAGCGTTTATGATGCACATAAGTAGTAATGTGAAAAAGAGTATCACT
TTTTTTCTGAAGCAAATAAAAATGTTTCAATTAAACGTTGATCTAGTATA
ATACGGTATCAAATTACTTTCCGGCAGCCTGTCTATAATAGGCGGCCGCC
TATCTTACCGTTTCTGGTCTGAAATTTATTTTCAAATCGTAGGTAGCCGC
TCTTTATAATGAAATTTCAGGCGGCTGCTTCACTTTACTCAGGCGGCCGC
CTAATTTTAATTCGCATCTTCGACATGAAAAAACAAACAAAATGGCTTCA
ACGAATTTAGAGGTACAAAGATGCTCCTGTCTTTGACTTCAATAAGGTAA
ACTAAACGTTTTTATTGTTTTATTTTTCTAATGGAAGGAGAGACCGGAAT
CTTTTCCTTATTCTTCAGCTCAACAGCATTGAAAATGCTGAATCCTGCTG
CAAAGAAGAAAAAAAAAGTTACTGTGCAGTGAAGGTGAAGCGAGGGATCA
GCTGTTGCACAGCAAAAAGTTACCATTTTGTTAGATTTCGACAGGCGGCC
GCCTGGGTTGAGACAACAAAATAACAGACCAGAATATTATCAAGATAGGC
GGCCACCTTACCTAAAACGTTAAGTCAGGCGGCCGCTTAAGATTTCAGGC
AGCCGCCTGACCTTTACTGCCCATCCAAGATAGGGACAGGGTTGGCCATA
TCAGCCACGGTATTATTCTTTTGCGGTCGGTCCATCTGTTATTGTTTGTA
ATGACCTCTTAAATAGTGTTTTTGAAATTAAGGATTCAAAAATAATTTGA
TTCTCGTGTATAAACTAATGGGCTAAATTAAGATTATGACTACATATGTC
GTAATTTCTCATAAATCTGATAATCATTTCGTTATATAGTTGAGCTTTTC
AAATCCTTTGTCCCTTTTTCCCAAATGATATTAATGCTCTACTCTACTAC
GTTTATAGCAATTTTCAAGAATAGAGCAATGGCTTGGTAATAAAAGATGA
CCAAGACCATTTAAAAATTTAGGATATCTCTAAGAGCGTCAAATTTTTCC
TTTTTTTTAGTTTTTAGTTTTGATTTTTGGCCCAAATATACCTGTCACAA
AGTACTAAACCCCATCCCCTAGGGATAGCATTATTACAACAGGAAGTTGA
AAACAATCCAACATTTAAAAATTTATTTTCTCATTCCAGCTCATTTTCAA
CGGCGAATACGTGCGTACGGACGAGAAAGCATACCACGCTCAACATTTCG
TGTGTCATATCTGTGAATGTAGTTTAACAGGAGAACAACATCTAGTTGAC
GATGGACTGCCCATCTGCATTGCTTGTTATGATGATAAATTTGCATCGGT
TTGCCACAAGTGCAACAAATCTATCGGTAAGATTCTCAGTTTGGTAAAAG
TGGCTAAAAATATATTAGCTTTTTTTTTTCCTTTTTGTATTGACTGGTTG
GGACAACTTGATTTTTTTTTACTTTTCTTGTGATTTAGTTGATCATGCCC
AACAATGACATTGTTTCATTGACAAATTTTTTTAAATATATTTCATAAAA
TGCTAGGCACTTATAGCGGTGACAGGAAAACTGCCTGCCTAAATTCACCC
TCTAAAATTACCTAAAGTCTACTGATCGTTATGTTTTCATTTCTGGTTGA
CAGTCCACACTGGGCTTTGAATGTTTCGAAATGCAAGCATTCGCTACATT
GTAGTCGTAGTTATGGAATAAACTTTATATAACTCCATAACTCGAACATA
CAGGGAACACAGTTATTTCAAGTTAAGGAGGTTCGAGTTACAGATATCCC
AATGTATTATGGAAGAGGGTATTTAGCGCAGATATCATAAAACAACTTTT
CTTTTTCATTCAAACAGGTGTTGACGAAGAGGATGTCATTTACGATGACG
AACATTGGCATGATTACTGTTTAGTTTGTAGTCTTTGCAATTGCCGGTTA
AGCGGTACAAGTTTTGTTATTCGTGATGACAATTTCTTATGCTCGGATTG
CTACCAAAAGACTGATGACAAAAGATGTAAAACGTGCGGCAAAGGATTTG
AACCGGGTGCCAAAAGGTTTGTAAAGTTTTTGTGACAGCGTAACCTATGC
TTATTTTTTCATTCGGGTCGGAGATAAGATTTGGCGAACCAAAAATGTCG
AAAAAATTTTCGGATTTATTATTTTAGCGAATCTGCGTTTAAAAAAAAAA
ATCCCAGATTTCGCGACTCGTTAATTTCGTTAACAAAGGCCCTTAAACCG
CCAATTTTCGTCAAAATTAGTAGATTCACAGTGTATTTTATACCGAAAAT
CTTTTTTCGCGAGTTAACGATTCCAGGTGATTACTAAATAAATTCGAAAG
CTTTAAATTTGTTTACACTTTCTTACTCTTTTAAATTTTCAGGTTGGAAC
TGAAAGGAGAATTTTGGCATGACACGTGTTTCGTATGTGATATCTGCAAG
TCACCTATCACGTCCAAGAAATTCATTCAACACGAAGGATCACAAGTTTG
TTGTCCGTGTTTCGATCAGAAATTCGCGAAACGTTGCGCGAAATGTGAAG
AGGTTTTACGCGAGGGAGGTGTAGCTTGCGGTGGAGCTTTCTATCACCGT
GATTGCTTCCAATGCGAGATTTGTAACGCGTCCATCGCTAATCAAGCTTT
CCAACAGAAAGACGGATTCCGTTACTGCATGCCGTGTTACAAACAACAGT
ACGCCAAACGTTGCGCCGGTTGTGATAGTTATATAGTGAACGGAGAGTAC
TATACTGTCGATTCAGATAGCTGGCATAAAGAGTGTTTCAAATGTGAAGT
TTGTCATATTGTTCTCCAACAACAAACGTTTGTTCAAGAGAATGGTAAAG
TTAAATTGGTATGTGAAAGCTGTCTTTAAACAAAGAAGTGCGTTGTGGAA
TGTACCCTCTTCTTTGATTGGCTGTTGTAGAAGGGCCTACCAAGTGCCGA
AAAGAGAAGCTTTTGAATTCAACAAGGGTTTCATGGAGCTGATGGGTCTT
GTGCATTCATAAGATCTACCTACAACGCTGTAAAAAAGACTCTGTCGATT
AAACCTAAGAACGCATTTATTATGAAAGAAGCCGCATAAAAAGAAAGGAA
TATTTGGTATAGACAGACAAACTCATGAAGCATTATGGGAATGTTCTATG
CGTTTAATCAATCCTGATTCAAAAAGTGAAGAAGTCAGGCATTGAAACTT
ACAAAATGAACCTTGCTTACTTATAAAGTAAAAAAAAAGTAATACCTTGA
AGAAGTTTGACAAAATTGTAAATGAATAATGAACTGGAAAATTTCACATT
CATATTTCTCAAATGGAAGAAAAAGAAATTAACTATTTTGTATTAAAGGT
TTTAATAGTATCATTAGTTGTCAATTAATTAATTAATTATGTTTTTGTTT
AACTAAAATGGTGCAGTCAGATGCTCAGGGAATATATTCCTTAGTTTCTG
TTAACTTGATTGTAAACTATCAAGGATGTAATCGTAACTTCGGCATAGGC
ACCATAAACCTTGGGTTATCTGACTGTATTTTGCTTTTAACTGCACTTTT
TCTGTTAATTTTCTTATTACTTCACTTTAGATTCTTTAGAGTTTAAAAGT
TTGAGGGAAGGGGTTTCGGGGTTGTTGCAACCCATATTCACACATTGTTT
TTATTATTCCACATGATACACTTTCAATTAATTTATTTTGTGTTATCGTT
AAATTATTTCGGTTGTATTTAATTTTTTTTTTTTTTGCTTTTACATTTTT
TTTACATCTCTAACAATAAAATTCTCTATTCTTCTAAATCGGAAATGATA
AAAATTCGATTAAAATTATCTGGATTTGTTGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000750XLOC_000750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001463-exon-sc0000010-1575043694:380900..380975TCONS_00001463-exon-sc0000010-1575043694:380900..380975Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1575043694:377252..377426TCONS_00001463-exon-sc0000010-1575043694:377252..377426Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1575043694:376233..376463TCONS_00001463-exon-sc0000010-1575043694:376233..376463Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1575043694:375834..376049TCONS_00001463-exon-sc0000010-1575043694:375834..376049Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1575043694:374000..374186TCONS_00001463-exon-sc0000010-1575043694:374000..374186Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1575043694:373310..373508TCONS_00001463-exon-sc0000010-1575043694:373310..373508Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1575043694:371541..372983TCONS_00001463-exon-sc0000010-1575043694:371541..372983Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1510915933:380900..380975TCONS_00001463-exon-sc0000010-1510915933:380900..380975Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1510915933:377252..377426TCONS_00001463-exon-sc0000010-1510915933:377252..377426Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1510915933:376233..376463TCONS_00001463-exon-sc0000010-1510915933:376233..376463Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1510915933:375834..376049TCONS_00001463-exon-sc0000010-1510915933:375834..376049Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1510915933:374000..374186TCONS_00001463-exon-sc0000010-1510915933:374000..374186Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1510915933:373310..373508TCONS_00001463-exon-sc0000010-1510915933:373310..373508Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1510915933:371541..372983TCONS_00001463-exon-sc0000010-1510915933:371541..372983Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1491911889:380900..380975TCONS_00001463-exon-sc0000010-1491911889:380900..380975Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1491911889:377252..377426TCONS_00001463-exon-sc0000010-1491911889:377252..377426Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1491911889:376233..376463TCONS_00001463-exon-sc0000010-1491911889:376233..376463Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1491911889:375834..376049TCONS_00001463-exon-sc0000010-1491911889:375834..376049Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1491911889:374000..374186TCONS_00001463-exon-sc0000010-1491911889:374000..374186Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1491911889:373310..373508TCONS_00001463-exon-sc0000010-1491911889:373310..373508Clytia hemisphaericaexon
TCONS_00001463-exon-sc0000010-1491911889:371541..372983TCONS_00001463-exon-sc0000010-1491911889:371541..372983Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:371541..380975 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.63245e-09	6.28279e-05	0	0.340214	3.82951e-06	2.5098e-06	0.00687667	1.75692e-08	1.55583	1.54668e-09	9.71724e-07	0.556107	19.2451	18.3982	2.72548	8.07929e-07	2.37682	1.70172	19.3475	15.7825	2.39787	4.94911	0.102791	3.89081	3.89582e-06	0.000211896	1.54609	1.21184e-07	1.54849	2.47248
Blast
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BLAST of TCONS_00001463 vs. Swiss-Prot (Human)
Match: FHL5 (Four and a half LIM domains protein 5 OS=Homo sapiens GN=FHL5 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 8.457e-60
Identity = 92/269 (34.20%), Postives = 146/269 (54.28%), Query Frame = 3 
Query:  747 AQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAFYHRDCFQCEICNASIANQAFQQKDGFRYCMPCYKQQYAKRCAGCD---SYIVNGEYYTVDSDSWHKECFKCEVCHIVLQQQTFVQENGKV 1544
              HF C  C  SL G+++++ D  P C+ CYD  F++ C +C K I  D +D+ Y D HWH+ C  C+ CN  L    F  +D+  LC++CY      +C  C +   PG++++E KG +WH+TCFVC+ C+ PI +K  I  E    C PCF+++FA  C  C++V+  GG+      +H++CF C  C   +  + F  +D + +C+ CY   YA +C  C    S +   ++       WH ECF C  C + L  + F+ +N ++
Sbjct:    3 TAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEI 271

HSP 2 Score: 97.4413 bits (241), Expect = 9.757e-22
Identity = 62/214 (28.97%), Postives = 89/214 (41.59%), Query Frame = 3 
Query:  561 WHPGCFECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELIFNGEY-VRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFE--PGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVC 1193
            WH GCF+C KCN  L +  +  KD  + C   +  E   +C  C   I  G   +      +H   FVC  C   +  +  +  +    C+ C++ +FA  C+ C K I      + + D+ WH  C +CS C   L    F+ RDD   C DCY      +C  C K      GAK +  +   WH  CF C  C   +  K F+       C
Sbjct:   62 WHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVI--TSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFC 273

HSP 3 Score: 88.1965 bits (217), Expect = 7.719e-19
Identity = 63/276 (22.83%), Postives = 113/276 (40.94%), Query Frame = 3 
Query:  576 FECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELI-FNGEYVRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAF-------YHRDCFQCEICNASIANQAFQQKDGFRYCMPC 1379
            F C  C   L    Y  KD   +CV  +       C  C + I  + + +   ++ +H   F C  C  SL  +     D   +C  CY ++ +S C  C ++I      + +   +WH+ C VC  C   +     + ++    C  C++K     C  C K    G   +    + WH  CF+C  C+  +  ++F+  +    C  C++  +A +C  C + +   G+  G  F       +H +CF C  C+ S+  + F  ++   +C  C
Sbjct:    6 FYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGG--ITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPI--SGLT-GAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKC 276
The following BLAST results are available for this feature:
BLAST of TCONS_00001463 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FHL58.457e-6034.20Four and a half LIM domains protein 5 OS=Homo sapi... [more]
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