TCONS_00001462 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001462
Unique NameTCONS_00001462
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2516

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001462 ID=TCONS_00001462|Name=TCONS_00001462|organism=Clytia hemisphaerica|type=transcript|length=2516bp
ttcttttcttttcttttttgactaTCTCTTGTTGAAGAGTGATTTCGTTG
GTTTTGATATCAGAGAAATCAGTATTTGAATTGTGAGCCGGACGAACACG
GAAAAGGTATGGACGATATCATCGATTCGTATAAAAAGAATCGGGAAAGT
TTACACGATACAAACGAAAACATCGTACTTCATAATGGGCACGAGAGCGA
TCAATATATGTGGGTCCCGGCTGGACTAGACGCTAATCTAATCGAAGATT
ACATGGCTTCTCTACCACGTCACAAAGTTCCACATTTCAAGAATCCTGAT
GGCATCTCTTACCATAACAAACAACTTATCCAACAAATACCTCTACAAGA
TTCCAATTTCGAAAACATCTCCACTCTCGAAGATGATGAACGACAAATTT
TTAACGGATTTAAAAGAGAACGTGACTCCCAAATGGATTCGGGCAAAGTC
ATAGTGGCAGATGATAATTATGTCTGTCGAAAATGCGGAAAAGAAATCTA
CCAAGATGATTTACTAGTCAGGGCTTCAGCCCTCGGAGAAGAAGCTGTCT
GGCATCCAGGCTGTTTCGAATGTTGTAAATGCAACGAGCTGTTAGCAGAT
CTTATTTACTGCTACAAGGATGGTGATATTTTTTGCGTCCGCCATTTTGG
AGAAGAGTTGAAACCAAGATGCTGTATGTGTGACGAGCTCATTTTCAACG
GCGAATACGTGCGTACGGACGAGAAAGCATACCACGCTCAACATTTCGTG
TGTCATATctgtgaatgtagtttaacagGAGAACAACATCTAGTTGACGA
TGGACTGCCCATCTGCATTGCTTGTTATGATGATAAATTTGCATCGGTTT
GCCACAAGTGCAACAAATCTATCGGTGTTGACGAAGAGGATGTCATTTAC
GATGACGAACATTGGCATGATTACTGTTTAGTTTGTAGTCTTTGCAATTG
CCGGTTAAGCGGTACAAGTTTTGTTATTCGTGATGACAATTTCTTATGCT
CGGATTGCTACCAAAAGACTGATGACAAAAGATGTAAAACGTGCGGCAAA
GGATTTGAACCGGGTGCCAAAAGgtTGGAACTGAAAGGAGAATTTTGGCA
TGACACGTGTTTCGTATGTGATATCTGCAAGTCACCTATCACGTCCAAGA
AATTCATTCAACACGAAGGATCACAAGTTTGTTGTCCGTGTTTCGATCAG
AAATTCGCGAAACGTTGCGCGAAATGTGAAGAGGTTTTACGCGAGGGAGG
TGTAGCTTGCGGTGGAGCTTTCTATCACCGTGATTGCTTCCAATGCGAGA
TTTGTAACGCGTCCATCGCTAATCAAGCTTTCCAACAGAAAGACGGATTC
CGTTACTGCATGCCGTGTTACAAACAACAGTACGCCAAACGTTGCGCCGG
TTGTGATAGTTATATAGTGAACGGAGAGTACTATACTGTCGATTCAGATA
GCTGGCATAAAGAGTGTTTCAAATGTGAAGTTTGTCATATTGTTCTCCAA
CAACAAACGTTTGTTCAAGAGAATGGTAAAGTTAAATTGGTATGTGAAAG
CTGTCTTTAAACAAAGAAGTGCGTTGTGGAATGTACCCTCTTCTTTGATT
GGCTGTTGTAGAAGGGCCTACCAAGTGCCGAAAAGAGAAGCTTTTGAATT
CAACAAGGGTTTCATGGAGCTGATGGGTCTTGTGCATTCATAAGATCTAC
CTACAACGCTGTAAAAAAGACTCTGTCGATTAAACCTAAGAACGCATTTA
TTATGAAAGAAGCCGCATAAAAAGAAAGGAATATTTGGTATAGACAGACA
AACTCATGAAGCATTATGGGAATGTTCTATGCGTTTAATCAATCCTGatt
caaaaagtgaagaagtCAGGCATTGAAACTTACAAAATGAACCTTGCTTA
cttataaagtaaaaaaaaagtaataccTTGAAGAAGTTTGACAAAATTGT
AAATGAATAATGAACTGGAAAATTTCACATTCATATTTCTCAAatggaag
aaaaagaaattaactATTTTGTATTAAAGGTTTTAATAGTATCATTAGTT
gtcaattaattaattaattatgtTTTTGTTTAACTAAAATGGTGCAGTCA
GATGCTCAGGGAATATATTCCTTAGTTTCTGTTAACTTGATTGTAAACTA
TCAAGGATGTAATCGTAACTTCGGCATAGGCACCATAAACCTTGGGTTAT
CTGACTGTATTTTGCTTTTAACTGCACTTTTTCTGTTAATTTTCTTATTA
CTTCACTTTAGATTCTTTAGAGTTTAAAAGTTTGAGGGAAGGGGTTTCGG
GGTTGTTGCAACCCATATTCAcacattgtttttattattcCACATGATAC
ACtttcaattaatttattttGTGTTATCGTTAAATTATTTCGgttgtatt
taattttttttttttttgcttttacattttttttacatcTCTAACAATAA
AATTCTCTATTCTTCTAAATCGGAAATGATAAAAATTCGATTAAAATTAT
CTGGATTTGTTGCAAC
Run BLAST on NCBI

transcript from alignment at sc0000010:371541..378821-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001462 ID=TCONS_00001462|Name=TCONS_00001462|organism=Clytia hemisphaerica|type=transcript|length=7281bp|location=Sequence derived from alignment at sc0000010:371541..378821- (Clytia hemisphaerica)
TTCTTTTCTTTTCTTTTTTGACTATCTCTTGTTGAAGAGTGATTTCGTTG
GTTTTGATATCAGAGGTGAATGGTCGTAAATTTTTTTTTGCCAGACGAAC
GAAGTACTGTATATGCCCTTAAAGTGCTATGATCTCTAATTTTATCGAGA
AATATTTGTTTGGATTGTGTGTAGTATATACTGCAAAGTGTAATGTTTTT
GTTTTTGTTTTGGCGTGCCACTCAAAGGCTTAATAAAAAATCTTATAATG
TGATTCCTTACACATTCTTAAACCGTTTTATTTATCTTTTCTAGTGTAGT
GTAGTGGGTGAGTTTCGATGTTAACAAAAATCCTGTGAGAAAACTTTCAA
GTTAAAGCGTTTTTTGTTGTTTTCGGCTAATTCAACTTTATATTACAAGC
TTTCATTTTCGTCATTTTTACGTTCTCGCAATTTTTGATATAGTTGTTAT
GACTTTAGTTTGAAACAAGAGAGACAAAAACTAGAAATATAATAGTTCTA
TNTGTTATGACTTTAGTTTGAAACAAGAGAGACAAAAACTAGAAATATAT
TAGTTCTATATTGTTCTTGTTTTGTCTTTTCAAATGATCTGGTCTGCCAT
CCACCAGCTTCTACATTTTTAAAGACTTTCTAGAAAAACTAAATAGAATT
TGAAGTAACTTTTGCAAATAGTAATTCGTAAAAATACTTTTTTCGGGTTT
CTTTACTTTTGCTGCTCAGAACTTTTTGGAAGCATTATACCTTATAGTTG
TTAAGAAGTTTTTATAATCTTACTTGCTTTTTAATCAAAACAAAGTTAAT
TCCATTCAAGTACTTATTTTGAGAGTTCAGTGAGGATTTTAACGTCTTGT
TATCTGATGTGATGCACACATATTTAGGTTTTTCTTGTTTAAAATTCTTT
CCTTATATCCTTATTTGGACTTTATTGAAATTGCGAGGAGTTGATTTACT
ACGTCTATTTGGATTTATCTGAAACTCGGAGAGATAAGATTTCTCTTGTT
TCTCTGTTAAGCAATTGAGAAATTGGAGTAGGCTTTCAAAAAGATTTTAT
CTTCANCTGTTTCTCTGTTAACCAATTGAGAAATTGGAGTAGGCTTTTAA
AAAGGTTTTATCTTCATAACGGTTTCACTGCTTTTTTATTTCTTAAGATT
TTCATTTAACTGTCTGAACAATCTACAACCACAATTTTTTCGGTTATTCT
GTGTCTTTTTGGAAGATTTTAAAAAGAAAAATTTTTTAATGCTAATTCAA
ATTACTATCATTGACAGAACTGGCGTCCATCGCAACCTTCGACTAGTGGG
AGACGGTGGATAAAAAGCTCTGTCCAAGATTATAGATTAAACTTTTTTAA
CAGGTGTATGTACTAAAAACTTTTCTCTCCATTTTCTCTCTTCAGAAATC
AGTATTTGAATTGTGAGCCGGACGAACACGGAAAAGGTATGGACGATATC
ATCGATTCGTATAAAAAGAATCGGGAAAGTTTACACGATACAAACGAAAA
CATCGTACTTCATAATGGGCACGAGAGCGATCAATATATGTGGGTCCCGG
CTGGACTAGACGCTAATCTAGTACGTAAACCTTTTTATTGATTCTGGTTT
TCTTACTTATCAAAATATTGAGCTTCTCACTATTTTTAATAGGCGAGTTT
ATGTATCGGAGGATATCGAGGGCGACGGTAAGTGAAGTCGACGCAAAACA
AAGTCGATAGTTGGTATACAGCTCTATATCGCCTTTACTCACCTAAACAG
ACGACGGTATTATGGGTGTTTTTACCGTTGTCGAGTAAAATGGACTTTGC
TTTATATCGTCTCCTAGAATTTATCTCACACTAATTCGCTATTAAGTGAC
ATCAGGCCTTTGGATCTGCTAGTTTCGAAATCTTGACGAAACACTGTGGT
CTAAGATTAAGGTCTGTAGCCTAGAAAAAAATAGGATATCTCTTATATCT
AGCATTCTAGTCTATCTGAAGTATGTTTGTAACAGCGGATATATCAAATC
GCTTTGCTAAGCATGATTTTCATACTATTTCTGGCCATGTTTTTTTGAAA
ACGACTTCCACATTTTGAAGTTCCTGATCCTGTTTTTGTTTTTGTTTTGA
ATTCCGAGGCTTATGATGTGAGGTCCTCATAACCACGTGCGTTTACAATA
GGATATTATTGGTGGTCGATAGTTTACGTCGAAACTCTCCCGGCTATTGA
CTTTCAAACTCAACATAGTATTTTCATACGCAGACCATTTTATTTACCAG
TGAACCTTGTTATTTCGGAGAAAACTATCCAAGGTTCTAACATTTACTTA
AAGATTAATGCAATAAACTAAAATTATTCTAAAAAAATCTATTTTCACCT
TTAAACAGATCGAAGATTACATGGCTTCTCTACCACGTCACAAAGTTCCA
CATTTCAAGAATCCTGATGGCATCTCTTACCATAACAAACAACTTATCCA
ACAAATACCTCTACAAGATTCCAATTTCGAAAACATCTCCACTCTCGAAG
ATGATGAACGACAAATTTTTAACGGATTTAAAAGAGAACGTGACTCCCAA
ATGGATTCGGGCAAAGTCATAGTGGCAGATGATAATTATGTAAGCTTAAA
GTTTGGTTTCATACAGTTAAAACCTTCTTCTTGTCATTTACCCTAAAGTT
TTCATAATGCATTTTTATTTCAGTCTTTTACCTTTCAGCCTTTCGATTTT
AACTGACTTGACAGAAAGTTATTGTAGATGGTGAATAAGATGATCATTTT
GTTATTATTGAATCCTTATTAGGTCTGTCGAAAATGCGGAAAAGAAATCT
ACCAAGATGATTTACTAGTCAGGGCTTCAGCCCTCGGAGAAGAAGCTGTC
TGGCATCCAGGCTGTTTCGAATGTTGTAAATGCAACGAGCTGTTAGCAGA
TCTTATTTACTGCTACAAGGATGGTGATATTTTTTGCGTCCGCCATTTTG
GAGAAGAGTTGAAACCAAGATGCTGTATGTGTGACGAGGTTGGTCATTGT
TCGCTTTTCACTGTTCATTTTACACGCGAGGAATCGGATTTTCATAAATT
ACCTCGCGAGCAACGCTTACCTCGTTTTAAAGAATTGCTATGGTAATTGT
TTCCCGGAGGAGTTCATAAGAAGTCTAAAACGAGGCAGTCGTTGTACTCG
AAATAATTCATGAAAAAGGTCTATTTATTTCTCGTGAACCCGTGCTTTGA
AGGTAAAAGTGAGAATAATATGTAGTACTCTCAGGTACCTAACAAACGGG
AAGGAGCTGGGAAAATTCTTCGAAATTCAATAAAGGGGGGAGGTGGTACC
TCATTGTGGGGGGGGGGGGGACCTAATTTCCGGGGGTTTGAAATTGTACA
TCTAAGTTCCCCAAATATTTTCAAATTTAATTTAAGGGGGTCCTAATAAG
GTCCTGGGGAAAATTATCGAAAAATGAACGAAAAAATTAACAAGCGGGGA
AGCGTTTATGATGCACATAAGTAGTAATGTGAAAAAGAGTATCACTTTTT
TTCTGAAGCAAATAAAAATGTTTCAATTAAACGTTGATCTAGTATAATAC
GGTATCAAATTACTTTCCGGCAGCCTGTCTATAATAGGCGGCCGCCTATC
TTACCGTTTCTGGTCTGAAATTTATTTTCAAATCGTAGGTAGCCGCTCTT
TATAATGAAATTTCAGGCGGCTGCTTCACTTTACTCAGGCGGCCGCCTAA
TTTTAATTCGCATCTTCGACATGAAAAAACAAACAAAATGGCTTCAACGA
ATTTAGAGGTACAAAGATGCTCCTGTCTTTGACTTCAATAAGGTAAACTA
AACGTTTTTATTGTTTTATTTTTCTAATGGAAGGAGAGACCGGAATCTTT
TCCTTATTCTTCAGCTCAACAGCATTGAAAATGCTGAATCCTGCTGCAAA
GAAGAAAAAAAAAGTTACTGTGCAGTGAAGGTGAAGCGAGGGATCAGCTG
TTGCACAGCAAAAAGTTACCATTTTGTTAGATTTCGACAGGCGGCCGCCT
GGGTTGAGACAACAAAATAACAGACCAGAATATTATCAAGATAGGCGGCC
ACCTTACCTAAAACGTTAAGTCAGGCGGCCGCTTAAGATTTCAGGCAGCC
GCCTGACCTTTACTGCCCATCCAAGATAGGGACAGGGTTGGCCATATCAG
CCACGGTATTATTCTTTTGCGGTCGGTCCATCTGTTATTGTTTGTAATGA
CCTCTTAAATAGTGTTTTTGAAATTAAGGATTCAAAAATAATTTGATTCT
CGTGTATAAACTAATGGGCTAAATTAAGATTATGACTACATATGTCGTAA
TTTCTCATAAATCTGATAATCATTTCGTTATATAGTTGAGCTTTTCAAAT
CCTTTGTCCCTTTTTCCCAAATGATATTAATGCTCTACTCTACTACGTTT
ATAGCAATTTTCAAGAATAGAGCAATGGCTTGGTAATAAAAGATGACCAA
GACCATTTAAAAATTTAGGATATCTCTAAGAGCGTCAAATTTTTCCTTTT
TTTTAGTTTTTAGTTTTGATTTTTGGCCCAAATATACCTGTCACAAAGTA
CTAAACCCCATCCCCTAGGGATAGCATTATTACAACAGGAAGTTGAAAAC
AATCCAACATTTAAAAATTTATTTTCTCATTCCAGCTCATTTTCAACGGC
GAATACGTGCGTACGGACGAGAAAGCATACCACGCTCAACATTTCGTGTG
TCATATCTGTGAATGTAGTTTAACAGGAGAACAACATCTAGTTGACGATG
GACTGCCCATCTGCATTGCTTGTTATGATGATAAATTTGCATCGGTTTGC
CACAAGTGCAACAAATCTATCGGTAAGATTCTCAGTTTGGTAAAAGTGGC
TAAAAATATATTAGCTTTTTTTTTTCCTTTTTGTATTGACTGGTTGGGAC
AACTTGATTTTTTTTTACTTTTCTTGTGATTTAGTTGATCATGCCCAACA
ATGACATTGTTTCATTGACAAATTTTTTTAAATATATTTCATAAAATGCT
AGGCACTTATAGCGGTGACAGGAAAACTGCCTGCCTAAATTCACCCTCTA
AAATTACCTAAAGTCTACTGATCGTTATGTTTTCATTTCTGGTTGACAGT
CCACACTGGGCTTTGAATGTTTCGAAATGCAAGCATTCGCTACATTGTAG
TCGTAGTTATGGAATAAACTTTATATAACTCCATAACTCGAACATACAGG
GAACACAGTTATTTCAAGTTAAGGAGGTTCGAGTTACAGATATCCCAATG
TATTATGGAAGAGGGTATTTAGCGCAGATATCATAAAACAACTTTTCTTT
TTCATTCAAACAGGTGTTGACGAAGAGGATGTCATTTACGATGACGAACA
TTGGCATGATTACTGTTTAGTTTGTAGTCTTTGCAATTGCCGGTTAAGCG
GTACAAGTTTTGTTATTCGTGATGACAATTTCTTATGCTCGGATTGCTAC
CAAAAGACTGATGACAAAAGATGTAAAACGTGCGGCAAAGGATTTGAACC
GGGTGCCAAAAGGTTTGTAAAGTTTTTGTGACAGCGTAACCTATGCTTAT
TTTTTCATTCGGGTCGGAGATAAGATTTGGCGAACCAAAAATGTCGAAAA
AATTTTCGGATTTATTATTTTAGCGAATCTGCGTTTAAAAAAAAAAATCC
CAGATTTCGCGACTCGTTAATTTCGTTAACAAAGGCCCTTAAACCGCCAA
TTTTCGTCAAAATTAGTAGATTCACAGTGTATTTTATACCGAAAATCTTT
TTTCGCGAGTTAACGATTCCAGGTGATTACTAAATAAATTCGAAAGCTTT
AAATTTGTTTACACTTTCTTACTCTTTTAAATTTTCAGGTTGGAACTGAA
AGGAGAATTTTGGCATGACACGTGTTTCGTATGTGATATCTGCAAGTCAC
CTATCACGTCCAAGAAATTCATTCAACACGAAGGATCACAAGTTTGTTGT
CCGTGTTTCGATCAGAAATTCGCGAAACGTTGCGCGAAATGTGAAGAGGT
TTTACGCGAGGGAGGTGTAGCTTGCGGTGGAGCTTTCTATCACCGTGATT
GCTTCCAATGCGAGATTTGTAACGCGTCCATCGCTAATCAAGCTTTCCAA
CAGAAAGACGGATTCCGTTACTGCATGCCGTGTTACAAACAACAGTACGC
CAAACGTTGCGCCGGTTGTGATAGTTATATAGTGAACGGAGAGTACTATA
CTGTCGATTCAGATAGCTGGCATAAAGAGTGTTTCAAATGTGAAGTTTGT
CATATTGTTCTCCAACAACAAACGTTTGTTCAAGAGAATGGTAAAGTTAA
ATTGGTATGTGAAAGCTGTCTTTAAACAAAGAAGTGCGTTGTGGAATGTA
CCCTCTTCTTTGATTGGCTGTTGTAGAAGGGCCTACCAAGTGCCGAAAAG
AGAAGCTTTTGAATTCAACAAGGGTTTCATGGAGCTGATGGGTCTTGTGC
ATTCATAAGATCTACCTACAACGCTGTAAAAAAGACTCTGTCGATTAAAC
CTAAGAACGCATTTATTATGAAAGAAGCCGCATAAAAAGAAAGGAATATT
TGGTATAGACAGACAAACTCATGAAGCATTATGGGAATGTTCTATGCGTT
TAATCAATCCTGATTCAAAAAGTGAAGAAGTCAGGCATTGAAACTTACAA
AATGAACCTTGCTTACTTATAAAGTAAAAAAAAAGTAATACCTTGAAGAA
GTTTGACAAAATTGTAAATGAATAATGAACTGGAAAATTTCACATTCATA
TTTCTCAAATGGAAGAAAAAGAAATTAACTATTTTGTATTAAAGGTTTTA
ATAGTATCATTAGTTGTCAATTAATTAATTAATTATGTTTTTGTTTAACT
AAAATGGTGCAGTCAGATGCTCAGGGAATATATTCCTTAGTTTCTGTTAA
CTTGATTGTAAACTATCAAGGATGTAATCGTAACTTCGGCATAGGCACCA
TAAACCTTGGGTTATCTGACTGTATTTTGCTTTTAACTGCACTTTTTCTG
TTAATTTTCTTATTACTTCACTTTAGATTCTTTAGAGTTTAAAAGTTTGA
GGGAAGGGGTTTCGGGGTTGTTGCAACCCATATTCACACATTGTTTTTAT
TATTCCACATGATACACTTTCAATTAATTTATTTTGTGTTATCGTTAAAT
TATTTCGGTTGTATTTAATTTTTTTTTTTTTTGCTTTTACATTTTTTTTA
CATCTCTAACAATAAAATTCTCTATTCTTCTAAATCGGAAATGATAAAAA
TTCGATTAAAATTATCTGGATTTGTTGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000750XLOC_000750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001462-exon-sc0000010-1575043694:378757..378821TCONS_00001462-exon-sc0000010-1575043694:378757..378821Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1575043694:377252..377426TCONS_00001462-exon-sc0000010-1575043694:377252..377426Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1575043694:376233..376463TCONS_00001462-exon-sc0000010-1575043694:376233..376463Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1575043694:375834..376049TCONS_00001462-exon-sc0000010-1575043694:375834..376049Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1575043694:374000..374186TCONS_00001462-exon-sc0000010-1575043694:374000..374186Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1575043694:373310..373508TCONS_00001462-exon-sc0000010-1575043694:373310..373508Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1575043694:371541..372983TCONS_00001462-exon-sc0000010-1575043694:371541..372983Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1510915933:378757..378821TCONS_00001462-exon-sc0000010-1510915933:378757..378821Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1510915933:377252..377426TCONS_00001462-exon-sc0000010-1510915933:377252..377426Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1510915933:376233..376463TCONS_00001462-exon-sc0000010-1510915933:376233..376463Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1510915933:375834..376049TCONS_00001462-exon-sc0000010-1510915933:375834..376049Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1510915933:374000..374186TCONS_00001462-exon-sc0000010-1510915933:374000..374186Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1510915933:373310..373508TCONS_00001462-exon-sc0000010-1510915933:373310..373508Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1510915933:371541..372983TCONS_00001462-exon-sc0000010-1510915933:371541..372983Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1491911889:378757..378821TCONS_00001462-exon-sc0000010-1491911889:378757..378821Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1491911889:377252..377426TCONS_00001462-exon-sc0000010-1491911889:377252..377426Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1491911889:376233..376463TCONS_00001462-exon-sc0000010-1491911889:376233..376463Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1491911889:375834..376049TCONS_00001462-exon-sc0000010-1491911889:375834..376049Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1491911889:374000..374186TCONS_00001462-exon-sc0000010-1491911889:374000..374186Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1491911889:373310..373508TCONS_00001462-exon-sc0000010-1491911889:373310..373508Clytia hemisphaericaexon
TCONS_00001462-exon-sc0000010-1491911889:371541..372983TCONS_00001462-exon-sc0000010-1491911889:371541..372983Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:371541..378821 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.41883e-07	0.000230196	0	0	8.01917e-07	0	2.75268e-05	0	3.67664	8.88642	0.000141371	2.49417	2.94533	0	13.7385	15.7706	1.09762	9.25043	0.000379121	1.13414	0.648035	0	1.22397	6.89892e-05	5.85214e-09	1.05428e-06	4.1161	5.84092	102.521	128.119
Blast
[Close]
BLAST of TCONS_00001462 vs. Swiss-Prot (Human)
Match: FHL5 (Four and a half LIM domains protein 5 OS=Homo sapiens GN=FHL5 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 8.592e-60
Identity = 92/269 (34.20%), Postives = 146/269 (54.28%), Query Frame = 1 
Query:  736 AQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAFYHRDCFQCEICNASIANQAFQQKDGFRYCMPCYKQQYAKRCAGCD---SYIVNGEYYTVDSDSWHKECFKCEVCHIVLQQQTFVQENGKV 1533
              HF C  C  SL G+++++ D  P C+ CYD  F++ C +C K I  D +D+ Y D HWH+ C  C+ CN  L    F  +D+  LC++CY      +C  C +   PG++++E KG +WH+TCFVC+ C+ PI +K  I  E    C PCF+++FA  C  C++V+  GG+      +H++CF C  C   +  + F  +D + +C+ CY   YA +C  C    S +   ++       WH ECF C  C + L  + F+ +N ++
Sbjct:    3 TAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEI 271

HSP 2 Score: 97.4413 bits (241), Expect = 9.093e-22
Identity = 62/214 (28.97%), Postives = 89/214 (41.59%), Query Frame = 1 
Query:  550 WHPGCFECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELIFNGEY-VRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFE--PGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVC 1182
            WH GCF+C KCN  L +  +  KD  + C   +  E   +C  C   I  G   +      +H   FVC  C   +  +  +  +    C+ C++ +FA  C+ C K I      + + D+ WH  C +CS C   L    F+ RDD   C DCY      +C  C K      GAK +  +   WH  CF C  C   +  K F+       C
Sbjct:   62 WHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVI--TSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFC 273

HSP 3 Score: 88.1965 bits (217), Expect = 7.604e-19
Identity = 63/276 (22.83%), Postives = 113/276 (40.94%), Query Frame = 1 
Query:  565 FECCKCNELLADLIYCYKDGDIFCVRHFGEELKPRCCMCDELI-FNGEYVRTDEKAYHAQHFVCHICECSLTGEQHLVDDGLPICIACYDDKFASVCHKCNKSIGVDEEDVIYDDEHWHDYCLVCSLCNCRLSGTSFVIRDDNFLCSDCYQKTDDKRCKTCGKGFEPGAKRLELKGEFWHDTCFVCDICKSPITSKKFIQHEGSQVCCPCFDQKFAKRCAKCEEVLREGGVACGGAF-------YHRDCFQCEICNASIANQAFQQKDGFRYCMPC 1368
            F C  C   L    Y  KD   +CV  +       C  C + I  + + +   ++ +H   F C  C  SL  +     D   +C  CY ++ +S C  C ++I      + +   +WH+ C VC  C   +     + ++    C  C++K     C  C K    G   +    + WH  CF+C  C+  +  ++F+  +    C  C++  +A +C  C + +   G+  G  F       +H +CF C  C+ S+  + F  ++   +C  C
Sbjct:    6 FYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGG--ITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPI--SGLT-GAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKC 276
The following BLAST results are available for this feature:
BLAST of TCONS_00001462 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FHL58.592e-6034.20Four and a half LIM domains protein 5 OS=Homo sapi... [more]
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