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TCONS_00001412 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001412
Unique NameTCONS_00001412
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length100

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001412 ID=TCONS_00001412|Name=TCONS_00001412|organism=Clytia hemisphaerica|type=transcript|length=100bp
GAAAGTGTTCACATTTTGACTGTATGTTCTTGGTGGTGGCTGAAGCGGTG
GCGAGCCTTCACAAAATCCTGCATCAGCATTTTCGTAATCTTCGTCGTCA
Run BLAST on NCBI

transcript from alignment at sc0000010:139247..140795-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001412 ID=TCONS_00001412|Name=TCONS_00001412|organism=Clytia hemisphaerica|type=transcript|length=1549bp|location=Sequence derived from alignment at sc0000010:139247..140795- (Clytia hemisphaerica)
GAAAGTGTTCACATTTTGACTGTATGTTCTTGGTGGTGGCTGAAGCGGTG GCTGAAGAGGTGGCGAGCCTAAAAATTAATCAAGAGAAAAATTTTAGATT GCGCAACAAAATTAACACAGTAAATTTAACACAGGTTATCTTCTGTACAC AACTTGACAAAAAAGATTAACCTTACAGCAACAGTCCCATAAATATGATT ACCAAAGTTTCTAATTGCTATCATATTTATCGTTCCTCTCTTCTTTCTAA AAATTCGTAAACATTTACAAGAAGCTGAGAGAAATACAGTTACTACAATT GAAAGTTCATTTCGAAAAACCATTGTATCAAATGGTCAGTCAAAATAGAG CAATTATGGAGTGATGGCTAAGTGGTCAAAGGCGTCAGCGTCTCGAACCA GGGATTCGCGATTCGGATCCCCGCTCCTTCTAATGTTCCGTACAATTCAT TCTAATCTTTAAGGAATAAATAGTCGAGCCGTGAAATAGTGAATCTCTAG AGTACGATACTTTGACATATATAATACTCGATTGTTACTACCTTCACAAA ATCCTGCATCAGCATTTTCGTAATCTTCGTCGTCAAACTGTAAAAAAAAG AGGGAAAATATGGAGGGTCGGTCACGTATTCAAGTTACGAATTTCCGTAA ATATCCTCANGGGGGGGGGGCTCTATGAAGTTATACACTAGGCTCGATCA ATGTAGACACTCAAGAAAACCAAGTCAAAGTCCAACATCTTTTTCACATT GAACAGGACTTTTTAGTATAAGCAGAGGAAGGGTTTTAAGGGTTACCCAA TACCTAAATGCAATTATCACCAAAGAAATAGTAAGCGAACAAAATTATGT TCGGGCATACAAAATATAAGTTCACGTGTAAAAAGTCGTACAAAAACTGT TGACAAAATAACCTACCAGATAGTTGTATGATTTGGATTCATCTATGCTA TCATTACTATTGTTGAAAGTGTTCACATTTTGACTGTATGTTCTTGGTGG TGGCTGAAGCGGTGGCTGAAGAGGTGGCGAGCCTAAAAATTAATCAAGAG AAAAATTTTAGATTGCGCAACAAAATTAACACAGTAAATTTAACACAGGT TATCTTCTGTACACAACTTGACAAAAAAGATTAACCTTACAGCAACAGTC CCATAAATATGATTACCAAAGTTTCTAATTGCTATCATATTTATCGTTCC TCTCTTCTTTCTAAAAATTCGTAAACATTTACAAGAAGCTGAGAGAAATA CAGTTACTACAATTGAAAGTTCATTTCGAAAAACCATTGTATCAAATGGT CAGTCAAAATAGAGCAATTATGGAGTGATGGCTAAGTGGTCAAAGGCGTC AGCGTCTCGAACCAGGGATTCGCGATTCGGATCCCCGCTCCTTCTAATGT TCCGTACAATTCATTCTAATCTTTAAGGAATAAATAGTCGAGCCGTGAAA TAGTGAATCTCTAGAGTACGATACTTTGACATATATAATACTCGATTGTT ACTACCTTCACAAAATCCTGCATCAGCATTTTCGTAATCTTCGTCGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000748XLOC_000748Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001412-exon-sc0000010-1575043694:140749..140795TCONS_00001412-exon-sc0000010-1575043694:140749..140795Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1575043694:139764..139772TCONS_00001412-exon-sc0000010-1575043694:139764..139772Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1575043694:139247..139290TCONS_00001412-exon-sc0000010-1575043694:139247..139290Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1510915933:140749..140795TCONS_00001412-exon-sc0000010-1510915933:140749..140795Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1510915933:139764..139772TCONS_00001412-exon-sc0000010-1510915933:139764..139772Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1510915933:139247..139290TCONS_00001412-exon-sc0000010-1510915933:139247..139290Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1491911889:140749..140795TCONS_00001412-exon-sc0000010-1491911889:140749..140795Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1491911889:139764..139772TCONS_00001412-exon-sc0000010-1491911889:139764..139772Clytia hemisphaericaexon
TCONS_00001412-exon-sc0000010-1491911889:139247..139290TCONS_00001412-exon-sc0000010-1491911889:139247..139290Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139247..140795 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001412 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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