Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

TCONS_00001386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001386
Unique NameTCONS_00001386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4807

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001386 ID=TCONS_00001386|Name=TCONS_00001386|organism=Clytia hemisphaerica|type=transcript|length=4807bp
CTCACGCAGGTATAATGtcttgttcttttctttttaaagagTGATAAATT
AAAGAGTATGAAACGAAAAAGCAAACATATCGTAATTTTAAACCAAGTTC
CATTTGTGGGTATCTAACATCATCATTGAAACAATGGATGAAATTCAACT
TCTTTTACAACAACTTGTCGACAAAGTTGTCCGAAATGAGGAACAATCTC
GTCCGAAAATTGAAGATCTTTGCAAGTTGAAAATCAGACATGTTACCACG
GAAACAATATATCAGAATGAGGATCCATCAGAGATTGCCGTGTCCGAATC
CTTTGATGACGCCCTTAAGATTATCGGACAGTTTTGTATCAATGCAGGTG
TAAAGAGATGTTCACCATATCGTAAAGGAATTATAGTTAAAGTCGGGAAG
ATACATCACAGAGAGATAATCCACTGGTATCGACGGAGCGAgcgatatat
ttttcaaaacgaaacaaaaacatGTTCCAATGATGCACATCTTGAAGGGA
TCCCATTCATCTCGTTTGGTGGAAACATCTATTCTTGTCAAtttaatgaa
acaaatgaaatgaCGGGGGAATTGAAACTTGGAGAGTCCGTCGTGTTAAG
AAAGATCGCGACCTTCCCGATGTTTAAGCTGAAATCGAATACGGAATCAG
AAATGAATGACAAAGAAGCTCTTTTACGTGAGCAACtgaaaaacaattca
aaaagtGTGGACCGAAAATTAGCCTACCTGATATCTTTCCCAAGAGACAT
TCGACGGAAAAGTCTGCATATTGACGGCGATGTTTCTTCCCTCATCACTC
TGTTAAAgCTCAAAAGTGCTGTTCTGTTTCCATCGATTCTAACGAAAGTT
GAAGATTTAATTCTTCAAGATTTGTCATATCACCAAATCGATAAATACAT
ACGGAATGAAATGTTTGACCAGAAAACACCACCTGCTAAAACAGACCAAC
GTTATTACCCTGATTTTAGTAGGCTGACAGATATCAGAAGAGTTATGTTA
AGCGCCAACACCTTAAAAATGGAGGATATCGACCATTTGGACAAATCATT
TCAAGagttaaaagaaaagaagaacgCGGAGATTTATTTCAAGGTTTATC
AACATCAACCGCCGTCACCAAATTTGAATGGATATAAACGACCTCAAAGT
GACTCATCTTATAATCAAGAAAATTCAGTTGACTTTTCGCTTAACATTCC
TTCATTACCTGGTACAAGCCGCTGCAACAAATCCACTGTTCCAAACAGCG
TCTGTGCAGAAAATGAGGGCAAAAAGAGGAGAAAAAAACCTAACCCAAAG
TATCAAATACCTGCTTACCCGAACTATCAATTACAAGCTAACCGAAAGTA
TCAAAGAGAAAGTCGGAAAAGAACGAAAATAAACACTTTGCTTTTACAAA
GTGATCGTATTCCTTTGCTAAAAAATGCGCCCTACAAACACAAACGCCCT
CCTCTTAAACCACCCATTTGGGACTCGCCCATTCAGAGATTTCTTCTATT
TCACCAGTCACAATCTCAGCAGTATTTACTAAACAGATATGGCTCCTTTG
TTTATATTACTGAAGTTCAACCTAAAAGTATTGGTTATAAAGCAGCAAAT
GGCGTTGCATCATTTTTGATTTGTGTTCGAACAAATGTTGATTGTCAAGT
TGTGGGGACAATACTTTGTAATAAATATAATGATCACGCCCAAGTCCTTA
AAGAAGCATTGACAGAGTTCAAAGAGATCAACGAATTTTGGAGACCAAAA
TATCTCATGATCGATCCCTCGGATGCAATGGTAAATTCTGTTGGAGAAGT
TTTTCCAGGTGTGGACTATTATTTCAACTCAAATTCTTGTATCCAAGAAT
GGGAAAAGAAGCTGAAAGATTCTCCAAGTGATGTAACTGAGCAATTTGAA
ACCATTATCGAAATgatgaaagatcttcaaacctCGCCTTTAGAAGAAAT
AggtattttactgaccagaacAGTAAGGATGGTCAAATCAGTTAACTTCC
CAAGATATCACTTTTGGATTTCTCAACGCAAGaaatgggCGAGTTGTTAT
TTTCCCATGAATTTATCTTTCTTTCTACGCGATGATTGGCTGTGTAAAAC
CACAGAAAAATATGAATTACAACTTCGGAACTACTCGCGTAAGAATTCAT
CAGGGCTCGTGAGGTTGATGGAAAATATAATTACCCAAATGGCTGACTCA
CAATATAAAAGATATGTCCTTATAAATCAAGAACTGAATGATTCTGGACT
CAAAATCGTGAAAGAAAATCCTTCACTCAACGATCAATATGGTCTGCCTC
TCCACATGATGACCCATTGTGCACCGATTGTGAAGCGACTGAATAGTGGT
CATTCTAGTAAAAGTGAGCATTTTGTTTCCTTTGGTAACCAAAAGTCTTA
CCCGTCATGCACTTGTGACGAATGGAAAAATAATAGATTACTTTGTCGAC
ATTTCTTGCTAGTGTTTAAACGAACGAAAAACGACTTTACTTCATTGAGT
CCACTATACTTGGCAAATTCATGCTTTCGTATCGACTCCTTAGCTATAAA
GAAAGCAGTGAAAgatgaaaaaccaaaaacaagaACTATTGGGACTCAAT
CTAGACAAGAATCAAATGAAAAACCAAAATTGAGATCTTTTGGGACTCAA
TCTAGATTGGAAAAGAAATGTTCAAAATTAGTTCAAACTGATCAACTGCT
ACCAACGTACTATCAAACCGGATTGGGTCATGTAtataaaattaatgaaa
ttggAAANTTACTATCAAACCGGATTGGGCCATGTAtataaaattaatga
aattgaaaattctgaaaCTGAAAACATTGCTGAGGCAACGGCACCAGAGT
TACACACAAACGATGCTGTCCTTTCTGAGGCGTTACCAAAGCATCATACG
TTGGACGCATTCATTGATGAAGTTGACATTGCTACGGGAGGAAAACGCAA
TCTAATTCAGGATCAATCTCCAATCAATACTTGCCAGACCGGCTCATTGA
TTGGAAAGGAACACTTTGCTACAACGCCTAATACATCAGCATCTTTGGAA
GATCAAAATAAGCGAAATATATTCGAAAAAACAGTTACAGGTGGAAAAAA
TAACGGTATCGTTCCTACATTTAAGGATTCTACGCAAGCAAGAGCTTATC
TAGAGAACTCGTCTTCGTCCACATACGCTCTATATAATTCAAACTTTCTT
GGAAGTGTGTTTCCAAGCATGATTACCAATTCCAAAGCAAAGAACTCATT
TACGAATCAATCCAACATCAATCAAGGAAATGCCTCTACAATTAATGAAC
AAGAGAACTTACCTTCCTCCCTCCATCTTCCACCAAGTACAAAACTTCTA
CCAAACATGTCTCCAAGTACAATCACTAACTCTAAACCAAAGACCTCTCT
AACCAACCCATCAAACATTAATGATAGCTTTTTAAAAGCATCTTTGATTG
TTAAAGATCGAAAATTACTACAAAAAGAGGTTAATCtttctcaaagaaaa
caaaCTGCGAGAATTGCTCCACCTCCGAAATTGATCATTAAAGACCAGAA
ACCCTTACCAAAACAAATGGATAGTATACTTTCTCGTTTAACCAATAAGA
ATCTAAGATAATTTAAGATAACTTAAATTCAACACTTAATAAGAATCAAA
CTGGCGCAGATTCGACACCAGCTAAGCGTTTGACCAATAAGAATCCAGCT
ATCTTAAATTCGACATCAGATAAGAATCTAATTGGCGCAGATTCGACATC
ATGTAGATTACAATCAAATATTCACGAGAAAGCTTTGAAcgaaatgaaac
aaaaagaaCATTCTCAATCGCTAACCCTCGTTCAGCCTGAATCAAATAGT
AAGTCTTTAAATTTGTCGATCGATCCGAGTCCCTTCCTCTGTGATGTACC
ATATCAATTGATGATGGAGTCAAAACCAAGCTCTGTAGTGCAAAGCTGCC
AACCACCTAATAAATCATCAGAAACATATCAGCAACAAAAGACTGGAATT
GACAGAAAACCAAGAAGAAAGAATTCAAAGACCGGAAAAGAAGCACTCAA
ATCAACTAAAACACTTATTGATGGTAACCGAATAATAACTCGGTACTGTG
AAGTCTGTCTAACGGACCTCAGCAGCAATTGTGAATTGAATAAGTGTTGC
CAGATATCCAAGATTCAATCAAGGTACGTAACAAAGCAAACTTCGAATAA
CATTGAAATTGTAGGAGGATGCAAGTCTCAAGACCACCCATcgtcaaaaa
caaaagttttaaatcTAAATAATACTGCAATCAAACGGAAATTGTCTTCT
ACCGAAATGGTAGACTTCACGAGTTCACCAAAacaacttttgaaaaagaa
gatattATCAAAATCGAGCGAACTTTTGAAACCAAGTAAAACAGAAAACG
AACTACAAAAGTTACCAAGTGAACCAATAAAATCAGGCAGCAAACCTTCG
ATTAAATTCAGTACCGAAAAACAATCACATGGTACCATGACTCATACACC
AAATAAACAAGAGAAACATCAAACGAATTCTAGCAAACAGGCACCTGTCA
GAATATACCAATACGCTTCCTATGTCGAACCAATATCCAATGAACTAAAA
GTTCCTCACTACCAGGACAATGACCAAGGATTGATTCCTGGTAACGAAAT
TAAAATTGAGACAGATGCTTTTGAATCTGATATTCCAATGACGGGACCCG
AATTTGTTGGTTAAAGATTCTTGTTAATATAAATAGTATTCATCTCTTCT
ATTAAGGTTGAATTTAttactacagttgacgctctgttattgggctattc
caaaaaa
Run BLAST on NCBI

transcript from alignment at sc0000010:871559..880024+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001386 ID=TCONS_00001386|Name=TCONS_00001386|organism=Clytia hemisphaerica|type=transcript|length=8466bp|location=Sequence derived from alignment at sc0000010:871559..880024+ (Clytia hemisphaerica)
CTCACGCAGGTATAATGtcttgttcttttctttttaaagagTGATAAATT AAAGAGTATGAAACGAAAAAGCAAACATATCGTAATTTTAAACCAAGTTC CATTTGTGGGTATCTAACATCATCATTGAAACAATGGATGAAATTCAACT TCTTTTACAACAACTTGTCGACAAAGTTGTCCGAAATGAGGAACAATCTC GTCCGAAAATTGAAGATCTTTGCAAGTTGAAAATCAGACATGTTACCACG GAAACAATATATCAGAATGAGGATCCATCAGAGATTGCCGTGTCCGAATC CTTTGATGACGCCCTTAAGATTATCGGACAGTTTTGTATCAATGCAGGTG TAAAGAGATGTTCACCATATCGTAAAGGAATTATAGTTAAAGGTACTTTA CTTTATTTTCctttaatatatatttttttaatgaaaatcatTGTCACTTC TATGTATTTTGAAGTTAACGGGTTACAAACTCGTAATTTTGACCATTAAA GCGGCAATAcactatttataaaagtaacaCTTTAGGTATATAATgacctt ggtaatggtttcaaaacgaggcagtcgttgcactcaaaataaatcatgaa aacACAATCGATCTAGATATCATTATAGAAAATCAGAAACTAGCtaacaa aatttcagccaacaTTGGTCGGCGGGCTGATTCGATTAGGTCGTTCAATG CAATCAAGTAATGAACTAAATCTGTACATTGAAGATAGCCTCCAATCACT TAAAGCAATTTTTCTCCATCATGGTGGTAGAAACTTAAATTTAGTTTGTA TTCAATTTTGTGAACGTGTATAAAAACAGTAGCGAAAACCAGTCGTTTTA CCCTTTTTTAAACGCTGGTATTATAGCACTCTGATATTCAGAAAAATAAT GTAGGGAAAGAAAGGTGCATGGAAATTGTTAGAATTGCTATGACTTTACT GCTCTCTGTACATAACCACCTTGCATCTACCGTCTACCAAATAACATGTT TTATGACTTTTATAATACCAATAGATAGTCTACTAGAGTTAGAAGATGCC AGCAGCCTCTACccttaaattatttttactattttatttaGTCGGGAAGA TACATCACAGAGAGATAATCCACTGGTATCGACGGAGCGAgcgatatatt tttcaaaacgaaacaaaaacatGTTCCAATGATGCACATCTTGAAGGGAT CCCATTCATCTCGTTTGGTGGAAACATCTATTCTTGTCAAtttaatgaaa caaatgaaatgaCGGGGGTTAGTAACTAATCTTTGCAACCTCTTTCCGTG TGCATTGTCAGCTTTTTTATGTTTACTGATAGTGTTTATTAGTAGCGTAA ATAAAACCTGGGATACACGCAATTTCAAATCTGATGATTCTAGGCTAGAT ACCACTTCTAGCATTTTGATAAAACACTAATCTTGCCTTACTCGAAGTTT GCAATTTGTAATCTGGCTTTCGTCATTTGGTAGTGTGTTCTTAAAGTCCT TAAGATTTATTTGTAATGTGTTATCTTTTTACAGGAATTGAAACTTGGAG AGTCCGTCGTGTTAAGAAAGATCGCGACCTTCCCGATGTTTAAGGTAAAC AGATATACTTATTGTTCaatcaattttgaaaacagATTCTTGAGATTGGT GGGCCCCAGGATTTTCTTGAGACTTtgaggtaaaagttggttattgagtt TTATTAACCCAAGGTGATGTAATATTGTATATGGTTTTTTTTGGTCTTTG CGCAAAAtaggatcattaatttttctcATAAACACAACACGAATTACTTA TTTACCATTTTTAACTCGTGATTTTTAATTCAATCATCGTAACTGATCTG AATTTAACGTTTTGTGTcgaaccaggtaggtccatatgAGTTATGTATTC TTCCCTATAGCTGAAATCGAATACGGAATCAGAAATGAATGACAAAGAAG CTCTTTTACGTGAGCAACtgaaaaacaattcaaaaagtGTGGACCGAAAA TTAGCCTACCTGATATCTTTCCCAAGAGACATTCGACGGAAAAGTCTGCA TATTGACGGCGATGTTTCTTNAGCCTACCTCATATCTTTCCCAAGAGACA TTCGACGGAAAAGTCTGCATATTGACGGCGATGTTTCTTCCCTCATCACT CTGTTAAAggtaaaatatttatttctaaaatttcactGATTACAGCTGAT TAACGGAATTTGACAAGCCCGAATTTTGTATGTTCTGATGCTCATTTGTT TATCTGAACCTTCATGGCCCAGTTTTTCTACCAACTTTATCTGTTTGATA ATATGGCTCCTATAAACTTTCACTCTTTCAGCTCAAAAGTGCTGTTCTGT TTCCATCGATTCTAACGAAAGTTGAAGATTTAATTCTTCAAGATTTGTCA TATCACCAAATCGATAAATACATACGGAATGAAATGTTTGACCAGAAAAC ACCACCTGCTAAAACAGACCAACGTTATTACCCTGATTTTAGTAGGCTGA CAGATATCAGAAGAGTTATGTTAAGCGCCAACACCTTAAAAATGGAGGAT ATCGACCATTTGGACAAATCATTTCAAGagttaaaagaaaagaagaacgC GGAGATTTATTTCAAGGTTTATCAACATCAACCGCCGTCACCAAATTTGA ATGGATATAAACGACCTCAAAGTGACTCATCTTATAATCAAGAAAATTCA GTTGACTTTTCGCTTAACATTCCTTCATTACCTGGTAAGCAATTAAGCTC TAAAACAGTTGAGTCTATTTAACTCGAAtctctataacttgaatgtctcc gtaactcgaacaagttttatggtcccttcagatTCCTTATCaaccttact ccataattcgaaattccttaactcgaacaggtTTTATGGTccattcagtt aacaatgctttataaaccttactccataactagaaattccgtaactcgaa caagtttcatGGTCCATTCAGTTAACAATTCCTTATCaaccttactccat aattcgaaatttccttGACTCGAAGATTTATTTTCTCTGTGCATGTTATG CAGAGTCTATTGTACTAATTTGACTCTTTTGGTCGAAGGTGGTTGGGAAA AAATTTAGGTGGAGCTAATACTTTACCTATTTAAACTAGATTAATTGTCA CtagtttttctctttttgagatttttgctttttttatggCATCAGATTCC TCAGAAGTCTTCGAGATCGTACTTTACAATAACCACCGTAATTCTTCTAT TTGTGACTGGTCTCTAGATCGTTCACGAATTCTTTTAGAAAACTTTTTCG CGAGAAATTCAGACGAACTATTTGTTTCACGAAAACTGATATGATTTAGG TATCGCGCCTTTTAGTTCTACAAGGTACGCtgcttcttttcctcttttgt CAACTCTTGGTTCTTCAGGTACAAGCCGCTGCAACAAATCCACTGTTCCA AACAGCGTCTGTGCAGAAAATGAGGGCAAAAAGAGGAGAAAAAAACCTAA CCCAAAGTATCAAATACCTGCTTACCCGAACTATCAATTACAAGCTAACC GAAAGTATCAAAGAGAAAGTCGGAAAAGAACGAAAATAAACACTTTGCTT TTACAAAGTGATCGTATTCCTTTGCTAAAAAATGCGCCCTACAAACACAA ACGCCCTCCTCTTAAACCACCCATTTGGGACTCGCCCATTCAGAGATTTC TTCTATTTCACCAGTCACAATCTCAGCAGTATTTACTAAACAGATATGGC TCCTTTGTTTATATTACTGAAGTTCAACCTAAAAGTATTGGTTATAAAGC AGCAAATGGCGTTGCATCATTTTTGATTTGTGTTCGAACAAATGTTGATT GTCAAGTTGTGGGGACAATACTTTGTAATAAATATAATGATCACGCCCAA GTCCTTAAAGAAGCATTGACAGAGTTCAAAGAGATCAACGAATTTTGGAG ACCAAAATATCTCATGATCGATCCCTCGGATGCAATGGTAAATTCTGTTG GAGAAGTTTTTCCAGGTATTTTGTTTTGTaagattgggctattccagaaa aaaattgtaacccCTACGTTGAGgagatctttttttttgaaaaggtaacc ccctggatttttttccaatttttcaggaccctcttggattttttccccat ttctttggaccaccctggatttttgatCTCGTTATactaaccaccctgga tttttttattttccagaccacccagggggtacagactatttctggaaaag cccattatatGTAGTTTTAGAcagtttgtttaaaaaattgatgTCGGGat tgtagtctgaatcgcagacctcttaGGTAGTGtctaaggagcacgaatcc gttatgCCAGCAGCCTACGGGGACTCTATTTAATTACAAAAGTCAACCTT CAAAAACTGAGGAATACTATTCGAATTGAAATCTTCTTTGTTTTGAAACT AAAAAATTGATTTCTACTACTAGAATCTAACGAAAGTAACGATATATCTG GTATCTCATTTTAAGGTGTGGACTATTATTTCAACTCAAATTCTTGTATC CAAGAATGGGAAAAGAAGCTGAAAGATTCTCCAAGTGATGTAACTGAGCA ATTTGAAACCATTATCGAAATgatgaaagatcttcaaacctCGCCTTTAG AAGAAATAggtattttactgaccagaacAGTAAGGATGGTCAAATCAGTT AACTTCCCAAGATATCACTTTTGGATTTCTCAACGCAAGGTTTCTATTTC GTAttatattcttttgttttcgaacAGTATCTCACATATTTGCATCATTT AACAgattcattcaaattttcaaggaatGGAGTATTTCACCGTCATGATA CTCCGTTGTTACTCNaatttattcaaattttcaaggaatGGAGTATTTTA CCGTCATGATACTACGTTGTTACTCTGCATGATCAACCTGGGGGTATAAT TGGGTAAAAGGGGTATGTGCCGCTGGTCAAGGTACCATTTTCACCTCCat gagtcccacgtagggtcgtAAAAGCGCAGAAATAGAAAAAGCAGTGCCTT TTTGGGggaaatttggtaaaaaataagGGAAAAATAGAGGATAATTtagg aatttcagtcccattcagcgtcactttttcataaattttggcaaaaaaat gagTCCCAAGTAAGATCTATTTTTCAAACCTCAGCGGCACACCCCCGTCG CTTGCCAAAGGTAGCACCCCTACCTGGGATTGTCAAGCTATAGTGTAAAG TTAGAACATTCGGCTACCGTGCAAACACAAGGCTTCGCCTGGGAGATAAA CCAGTTAATGCTGTACTTTGGTATTAGGGTAGCACTGGTGAGGTCTCAAT TATTACCTGGTAGAAGTTGAGTTTTATCTCTCTTTTTAACTTTcatatat ttttagaaatgggCGAGTTGTTATTTTCCCATGAATTTATCTTTCTTTCT ACGCGATGATTGGCTGTGTAAAACCACAGAAAAATATGAATTACAACTTC GGAACTACTCGCGTAAGAATTCATCAGGGCTCGTGAGGTTGATGGAAAAT ATAATTACCCAAATGGCTGACTCACAATATAAAAGGTAATGATATTAAAG TCATCTttttcacacccctgtctcggcAGTTAGTGGATTGTGTAATTTAA GGTCCGCCGTTTTAGGCcagttttagtttattttctacttggaatgaaat tttgtaaaatttctgTGATAAAATCGCTATGTAGTACATTCCTTTTGAAG TTACACTAAAACTTTATTGTCATTTAAGCAAGTTCTGTACGAGATAACTG TCTCTTTTTTAATCCGAATACTGTTTAGTTTAACcgtttaattaaatttt tatttttttaccccATTTAGATATGTCCTTATAAATCAAGAACTGAATGA TTCTGGACTCAAAATCGTGAAAGAAAATCCTTCACTCAACGATCAATATG GTCTGCCTCTCCACATGATGACCCATTGTGCACCGATTGTGAAGCGACTG AATAGTGGTCATTCTAGTAAAAGTGAGCATTTTGTTTCCTTTGGTAACCA AAAGTCTTACCCGTCATGCACTTGTGACGAATGGAAAAATAATAGATTAC TTTGTCGACATTTCTTGCTAGTGTTTAAACGAACGAAAAACGACTTTACT TCATTGAGTCCACTATACTTGGCAAATTCATGCTTTCGTATCGACTCCTT AGCTATAAAGAAAGCAGTGAAAgatgaaaaaccaaaaacaagaACTATTG GGACTCAATCTAGACAAGAATCAAATGAAAAACCAAAATTGAGATCTTTT GGGACTCAATCTAGATTGGAAAAGAAATGTTCAAAATTAGTTCAAACTGA TCAACTGCTACCAACGTACTATCAAACCGGATTGGGTCATGTAtataaaa ttaatgaaattggAAANTTACTATCAAACCGGATTGGGCCATGTAtataa aattaatgaaattgaaaattctgaaaCTGAAAACATTGCTGAGGCAACGG CACCAGAGTTACACACAAACGATGCTGTCCTTTCTGAGGCGTTACCAAAG CATCATACGTTGGACGCATTCATTGATGAAGTTGACATTGCTACGGGAGG AAAACGCAATCTAATTCAGGATCAATCTCCAATCAATACTTGCCAGACCG GCTCATTGATTGGAAAGGAACACTTTGCTACAACGCCTAATACATCAGCA TCTTTGGAAGATCAAAATAAGCGAAATATATTCGAAAAAACAGTTACAGG TGGAAAAAATAACGGTATCGTTCCTACATTTAAGGATTCTACGCAAGCAA GAGCTTATCTAGAGAACTCGTCTTCGTCCACATACGCTCTATATAATTCA AACTTTCTTGGAAGTGTGTTTCCAAGCATGATTACCAATTCCAAAGCAAA GAACTCATTTACGAATCAATCCAACATCAATCAAGGAAATGCCTCTACAA TTAATGAACAAGAGAACTTACCTTCCTCCCTCCATCTTCCACCAAGTACA AAACTTCTACCAAACATGTCTCCAAGTACAATCACTAACTCTAAACCAAA GACCTCTCTAACCAACCCATCAAACATTAATGATAGCTTTTTAAAAGCAT CTTTGATTGTTAAAGATCGAAAATTACTACAAAAAGAGGTTAATCtttct caaagaaaacaaaCTGCGAGAATTGCTCCACCTCCGAAATTGATCATTAA AGACCAGAAACCCTTACCAAAACAAATGGATAGTATACTTTCTCGTTTAA CCAATAAGAATCTAAGATAATTTAAGATAACTTAAATTCAACACTTAATA AGAATCAAACTGGCGCAGATTCGACACCAGCTAAGCGTTTGACCAATAAG AATCCAGCTATCTTAAATTCGACATCAGATAAGAATCTAATTGGCGCAGA TTCGACATCATGTAGATTACAATCAAATATTCACGAGAAAGCTTTGAAcg aaatgaaacaaaaagaaCATTCTCAATCGCTAACCCTCGTTCAGCCTGAA TCAAATAGTAAGTCTTTAAATTTGTCGATCGATCCGAGTCCCTTCCTCTG TGATGTACCATATCAATTGATGATGGAGTCAAAACCAAGCTCTGTAGTGC AAAGCTGCCAACCACCTAATAAATCATCAGAAACATATCAGCAACAAAAG ACTGGAATTGACAGAAAACCAAGAAGAAAGAATTCAAAGACCGGAAAAGA AGCACTCAAATCAACTAAAACACTTATTGATGGTAACCGAATAATAACTC GGTACTGTGAAGTCTGTCTAACGGACCTCAGCAGCAATTGTGAATTGAAT AAGTGTTGCCAGATATCCAAGATTCAATCAAGGTACGTAACAAAGCAAAC TTCGAATAACATTGAAATTGTAGGAGGATGCAAGTCTCAAGACCACCCAT cgtcaaaaacaaaagttttaaatcTAAATAATACTGCAATCAAACGGAAA TTGTCTTCTACCGAAATGGTAGACTTCACGAGTTCACCAAAacaactttt gaaaaagaagatattATCAAAATCGAGCGAACTTTTGAAACCAAGTAAAA CAGAAAACGAACTACAAAAGTTACCAAGTGAACCAATAAAATCAGGCAGC AAACCTTCGATTAAATTCAGTACCGAAAAACAATCACATGGTACCATGAC TCATACACCAAATAAACAAGAGAAACATCAAACGAATTCTAGCAAACAGG CACCTGTCAGAATATACCAATACGCTTCCTATGTCGAACCAATATCCAAT GAACTAAAAGTTCCTCACTACCAGGACAATGACCAAGGATTGATTCCTGG TAACGAAATTAAAATTGAGACAGATGCTTTTGAATCTGATATTCCAATGA CGGGACCCGAATTTGTTGGTTAAAGATTCTTGTTAATATAAATAGTATTC ATCTCTTCTATTAAGGTTGAATTTAttactacagttgacgctctgttatt gggctattccaaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000737XLOC_000737Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001386-exon-sc0000010-1491911889:871559..871950TCONS_00001386-exon-sc0000010-1491911889:871559..871950Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:871559..871950TCONS_00001386-exon-sc0000010-1510915933:871559..871950Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:871559..871950TCONS_00001386-exon-sc0000010-1575043694:871559..871950Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:872650..872825TCONS_00001386-exon-sc0000010-1491911889:872650..872825Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:872650..872825TCONS_00001386-exon-sc0000010-1510915933:872650..872825Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:872650..872825TCONS_00001386-exon-sc0000010-1575043694:872650..872825Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:873093..873152TCONS_00001386-exon-sc0000010-1491911889:873093..873152Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:873093..873152TCONS_00001386-exon-sc0000010-1510915933:873093..873152Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:873093..873152TCONS_00001386-exon-sc0000010-1575043694:873093..873152Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:873469..873621TCONS_00001386-exon-sc0000010-1491911889:873469..873621Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:873469..873621TCONS_00001386-exon-sc0000010-1510915933:873469..873621Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:873469..873621TCONS_00001386-exon-sc0000010-1575043694:873469..873621Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:873691..873717TCONS_00001386-exon-sc0000010-1491911889:873691..873717Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:873691..873717TCONS_00001386-exon-sc0000010-1510915933:873691..873717Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:873691..873717TCONS_00001386-exon-sc0000010-1575043694:873691..873717Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:873890..874292TCONS_00001386-exon-sc0000010-1491911889:873890..874292Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:873890..874292TCONS_00001386-exon-sc0000010-1510915933:873890..874292Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:873890..874292TCONS_00001386-exon-sc0000010-1575043694:873890..874292Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:874977..875573TCONS_00001386-exon-sc0000010-1491911889:874977..875573Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:874977..875573TCONS_00001386-exon-sc0000010-1510915933:874977..875573Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:874977..875573TCONS_00001386-exon-sc0000010-1575043694:874977..875573Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:876074..876297TCONS_00001386-exon-sc0000010-1491911889:876074..876297Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:876074..876297TCONS_00001386-exon-sc0000010-1510915933:876074..876297Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:876074..876297TCONS_00001386-exon-sc0000010-1575043694:876074..876297Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:876965..877143TCONS_00001386-exon-sc0000010-1491911889:876965..877143Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:876965..877143TCONS_00001386-exon-sc0000010-1510915933:876965..877143Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:876965..877143TCONS_00001386-exon-sc0000010-1575043694:876965..877143Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1491911889:877429..880024TCONS_00001386-exon-sc0000010-1491911889:877429..880024Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1510915933:877429..880024TCONS_00001386-exon-sc0000010-1510915933:877429..880024Clytia hemisphaericaexon
TCONS_00001386-exon-sc0000010-1575043694:877429..880024TCONS_00001386-exon-sc0000010-1575043694:877429..880024Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:871559..880024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.11875 2.13325 1.81687 1.00832 4.06724 2.25068 3.40758 3.58844 1.786 2.21896 1.52039 1.12495 1.56244 1.59751 2.78923 3.98667 2.71838 3.68479 1.19098 1.45452 2.5954 1.5978 2.64853 3.48115 1.88839 1.47531 2.14707 1.1384 3.40751 3.50097
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top