TCONS_00001368 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001368
Unique NameTCONS_00001368
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1046

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001368 ID=TCONS_00001368|Name=TCONS_00001368|organism=Clytia hemisphaerica|type=transcript|length=1046bp
ACAAAGGTTCAAACGATGTGAAGACACATGCATattcaaaaaaactttta
tcaacaaaaagaaagaaaaacaaacaaacacatcAAAAAATGGTGTTAGG
AAATTGGACATTGACCGAAGCAGTTGACCAGACAGCTTtctttgaagaag
aagaagaaaatcaatatgAATGCGAAGATGAAGAAACTAGAACACAATAT
CAATTTCATTTTATGGATAACCACGATACCAAAAGTTTTGAAGCTGACGA
GCTCATTATTTGCATTGGCAGCGGAAACGCTTTCATTGAAACTTACACAA
ACATGGGTGACAGTCAACACATAGCCTCATATCTCCAATCTAAAAGCGAC
TCTGATTCATCTCATAATAAGAGCAGTAAAAAGAACTCTTGTCATGTTTA
TAAAAGCCTAAAGACATTGATATGCAGCCTGAAGTATCACATTGAACCGA
AAGACCTTCACAATTGGACATCAACGTTACTGCAAAATATAAATGTCAAC
AATATCAAAGTACTTTGTCAATCACCCAAGTATTTACTGCGGAATCAAAG
AGAGTCTGACCATGGCGATGTAAATGATGTTGACGTACTGAGGTGTTTGT
CGTGTCATGCTGAAAGAATGGAAAGTCCCTCGAAAGTGAAAGTTctggaa
aatcaaaatattattaaaGATTTGCCAGCAGCAGtgTTCAACTACTGTTC
AGCGTACGAGAAATCGTGCACCCTTTACATAGCATACACTGAATCGCACT
TCGTTGACGTCTTCACGTTGAAATGTTTTGAACCTCTTCTTAAGGAAGTT
ACTTTATCAAATCAAGTTTCGGATAGTGTTTTGGCTACAAGGctgaaaaa
ttttgaaggttATGGTGTCTCTAAtaatgtttatatttgatatGATTTGT
AAATAAGTGAAATAGAACTGTAAATTTCATCTGTCTTTAGATAGTGTCCA
TACTGTTTAATACCTGACTTTTACCGTTTCGTACCCTGTTGTTTCGAGTG
TATGACAATATAAATCTCTTatgaattcctcgagggaattctattg
Run BLAST on NCBI

transcript from alignment at sc0000010:688970..702997+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001368 ID=TCONS_00001368|Name=TCONS_00001368|organism=Clytia hemisphaerica|type=transcript|length=14028bp|location=Sequence derived from alignment at sc0000010:688970..702997+ (Clytia hemisphaerica)
ACAAAGGTTCAAACGATGTGAAGACACATGCATGTTGGTAACTTTGGTAC ATCTTTgcttttcatttaataattCATACATTTATTTTCATATCTTttca tcaattgtaaaaggggttacgcacgatacgaaaatctcgtgttcgcaagc gaaaggtttttttacactacataccgtaggattgctaaacttccttattc ccagcgaaactttccgattgctagtgtCAAACAAAAGGAtcaaaacgcca caaaagtagatttaacacaaattttagccggagacgcctagaagcaaaaa gatcccggagacggggcaggtatgttttcccgggaatgagaaatttggcc attttatgatacaattttaaaaagttatgccCAGCCGATTGCGTGATGCT tgatcgggaaataattcgaggcatgatttgggctacTTTCGGGATATttg catggtgaacaaaccttttttggtaattttcatgatcgtcacgagagcaa ggaaaatttctattaatgcattttaaacatgtacaaactctggtNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaac atgtacaaactctggtgaaccaaaagaaagttgatattctattttcaaaa caaactgcttttttgaagtttttttaactcaaatatcttaaaatttcaac cttttctcttttctcgttttcttaaatcaggtgGTAATGTATATCTACAN aattatagcatccaaaagttatattttttgaaatgcatgtcaaaaagtta aaaactttcaaaacagggaaacaatttcataatttcaaacatacactttt ttaatataagaacaaatttataagaacaacgagcctcaaaatcgccaaaa aataagaacaatttaagaaaaatgctgagcctgaaactactcaatttcaa tcaatttaggggtcaaagtaataaaaattgggtatgatTCCTAAAGTACC Tgacttacatcctattaataagaacatgatagaagctcaaagtgcaaaaa aaaaaagagcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCC cctagcagaaggcattttgtaattttcaaaagcatgctgcaaatgcaaaa aatgtcacataattggcaatcataatttccaaaatttccaaaaagaaaaa aatgtcttcatgccaggatattgcttgaaataaattttcaattgaggcaa aaataaaaaaatgtagcgtttctggaaaccaaccgggtgaaaaataataa ttttctgatctggccacagactatgggttcatccaTACAGtatagttcat tataaaaaaattcaagttggagcatttaagctataaaagtagtttggtta gatattcccacttgtagatcaagaattgtttgttagttagtagttgatac attagtatattcagggcttacttcatactgtttgtacataaaagttattg ttaaagttctatGTCAATGATCTTATATATTAATTActaaagtcataaaa aaaatcaaataaaaatttttttttggccgGCCGCAtcaagcttttttcct tcacccgcattccggaaacactacatttatttttatttttgcctgacagc aaaatttttctacattttttaaatacatgtggaagaaaatgtcaagttaa agacaaacattttccacattttaagcGCACGGGGAAAAGAATGTCCAAGT TCACAGCAAAAacttccacgttttaaaagcacgtgaaagaaaatgtccaa attcacagcaaaaatttccatgttttaaacgcacgtggaagNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNaaaatatccaaattcacaaccaaaagttttccacgtt ttaagcgcacgtggaggaaaatgtccaaattcacaaccaaaggttttcca cgtttaaaatgcacacgtggaagaaaatgtccaaactcacaaccaaaagt tttccacgttttaaacgcacgtggaagaaaatgtccaaattcataaccaa aagttttccacgttttaaacgcacgtggaagaaaatgtccaaattcataa ccaaaagttttccacgtttaaaatgcacgtagaagaaaatgtccaaattc acagcaaaaatttccatgttttaaacgcacgtggaagaaaatgtccaaat tcataaccaaaagttttccacgtttaaaatgcacgtagaagaaaatgtcc aaattcataaccaaaagttttccacgtttaaaatgcacgtagaagaaaat gtccaaattcacagcaaaaatttccacgttttaaacgcacttGCAAgaaa attcacaaccaaaagttttccacgttgcatttttaaaacatcaatcatca atcagtaaattttgctctgggtttaaatttttacattaaagctaaccagt tcatatccgACCACACCCATTTCCTTGGCCTTGGGTGCCGCATCTACCAT CATCTGACCATCATCAAAAAGAGTgagttcaaaacttttttgatgtcgca agtatttaacttttcaaatatagcatggttagatttatccacaaatattc agtcacctgtcttgttagaatttgtgcAAATGtacgggcaaaattgaagt tagtttgttgtgaaagttgataaaatgtcctgtttttcaagagattGCAT ACGTCTCATgcatctctcatgccaaaccaaacgaaacatcaaatccagga atgaataataagaaaacttcatcatcaacaattttttgtaacaatcacac aaaaatcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgccatctttgtt ttgactgttagaaagcagtatggtccgatcaacaatacgcttccgaacca ggcgacgtttcccgatcgagaaggatacttatattttccGCAGACGTTTc ttgaagaaatgacgtcttcatcCTCGTAAAAAAAGACCCTACTGTTTATG gcgccggagctcgatttacaaagagatttggaaaaaatccattacgtaat gcttccaacagaTAGTCGGGTACAGGCGATAATTCTCCatattgggactt aagacagttgcacacgacgacgaaaaTCTGCATGGAAACGAGgcaaaaaa agctgaaaatcgattttatcacctcgcatatcagcttttttcccgcgctt ttgccaaaagattcgcactcgctcgctgcgctcgctcgtgcgtaattATC ATATATAGCTATCATCATGCAGAAACGGCGAAAATTGTAGTGTAAGTCAG TATCCATATTTCAAATTTGAGTGTTCATCAGGCAGGCCACCAGATTCGGG GAAAGATCCGTCAGCAGAACGTAAATGTATCCGCAATGACTGACTGTCAg cagacagttacatcaatgcaatatggggggggtttcaggggtcttaatag cctgggaatccaagctcataattttagaaaaaacaaaaaatacctcacct cacaaagttctaaaattatagagcttggtgcaggtagattagtctgaNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcttggtgcaggta gattagtctgacacagaatgttataaacagtctgtgtgtgaacccttgtt gacagactttctgaactttggaaacccaggcaaacacacatataCCTTTA TACctataaaaactctttcacaagctctaaaagactttcaaaactactaa aaactacatcaaaacatcagccacatgtatttagacttccagccaacagc cattttgtttcgaaatgaatctatgttttcattttcatttgttttccttt tttctgctgcagagtcagctttttccataaattatgcgcgcacatcgaaa atatcaaaatgcgcgcgaaagtactacTAAGTAATACGCCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNaaaaaaaaacattttcacgtttacgcaccaattttgcttttacatctt tggttaaacgattgtgaccttattgggctaaatttaacatttttatgGTC TCTATTAAACAGATTAACCTATTCTTATAACAAATTGACCTCTTAAAAGG CTCATAAAATCAGATTTTTATTGTATGTTTTTATCCAGACAGTCataatc aataaaatcaataaaatcgcATATTTTATGGATTACGGTTTTATTTATAT TGTATTTTTGTGTCCATAAACTCAGCATTTAACAGGAATGAGTCTACTTT TCTGCAACAGAGACCatgacaaatgaaatttcactgCTGGTAACCGCGcc cttttaaattttctttgttctcTTTCAAAATGGCCAAAGTTTATTGGAAA ATTATAAAGCAAGAAACATGCGATTTCacaaatttttgccttttttgtga aattaaaactcgcaGAATCGCTTTGAGATTTCTGACTcgtattttaaaat taaatccaccacaaaatttttaaaattgcattttaggcAGAGAAGCCAGT CCAAAGTCTacatttgtggcaaaaatggctattttttagctgttttcagg cttattcacaaaattaaatttttcaacaacaaagaacaaagaaaaaaaga agtcattgtattgctatgacgcataatcaaaaaagaaaaaagaaaagaca ggGGTAAGTTGGGACGGAAATATTTTAGACCTTACACATCCCCTACAGTA TATCAAAtcatcagaggggatgcgtgcagtcTAATGTCAAACAGGAACTA TAGTTCCAGTTTCTGTGtattttaatgtcaaataaCACTTTAATTTGTAG ATCAGCAAAATGtaaaactctaaaaatattaaacataTCTAAAACGatgt caaaaacaatttttattggTGTTGCTGCTGTAGTAATTgctggcattttt tatttttacaacaCTTATGATCTTGGTGTTAACTCTTTTAGCAGTGAAAA AGATAAACCTGTAGCCACTTTGAAAAGCGTGCAATATTCAATGATGGGTA ACAAATCTACAACAGCTTGTAAAGATTTTTCTGTCTTAACATGGAATGTA TGGTTTGGTACTGGCCAGAAATGGGATGCACCGGCAAAAAGATGGGTAGA GCTGTTGCATATTGTGGTTGGCAAAAAGCCAGATGTTATTGGATTTCAGG AATGCACTGCTGACTTCTTGAAAATTGTACAAGGACACACagaattttca aatctttatgTTGCACTCAATGACAAACCTGCTCATTCAAGATACTTTGT AATGATTTATAAAAGGAAAGAATTGAAGACTTTGAAGAAAGATACAATTA CTTTCAAAACACAACATGATAGAAGATGTGAATATTTGGATGTCGAAAAA GAAGGAGCTAAATTTCGCTTTGGTACTGTTCATATCGAGTCCTATGTCAC ATCACCAAATATCAGGGAAATTCAAATGGGAGCCATATTTGATGTTTTAC AAGacaaaaaagctaagaacaaaGAGCTTGCTTTTTTGGTTGGTGATTTC AATTTCCATGAAACAGACAAAGAAAATAAGTTTATAGAGACCAGTCAATT TAAGGATACATGGCGGGTTGTCCATAAGGAGGCACCTGGATATTCTTTTG AGTCCAAACATAATTTGATGAATCAACATGCAATGCTTGTTGGAGAAGGC ATCTCCACTCCAACTTTCTTAAGGTTAGATAGAATTTTGTTTTGGCAAGA TGATACAAAGGTATGGAAACCTACCCATATTGAACTTCTTGGACAGAAAT CATTTGATGAAATCATGTTAAAGGATGGCACTAAAGTACCATTGTTCCCT TCAGATCACTATGgtttattttcaagatttgagCTAATTGCTGATTAATT TGTTGGATAATATTTTTTCACTATAGATCTTATTGGAGTtgattgatttt tctaaaaaagtgatgcattgtgggattctTTCGGGattattacaatagaa ttccctcaagaaattcctaagagatttctattgtaatattcctaaaacaa tcccacaatgcatcgcttttttagaaaaatcaaaaactccgctAAGGTCT GTTGAACTTTTCACCGTTTTCATGtatatttgaaatcattttttggGGGG TCGTTATTGATTTTATCTTTTGTCTGTATTCTTAAGAGCAGTGGAAAATG GTTCAAACTGTGGTCAATGAATCTACAAAGTTAAAAATTAGCTCAACAAA CAGATTTTTACTCTCGACTTCGTTATGTTATCTTCTTTGTTACGTGGTTG CACTAATGAAATTATAGTAATTAATTtaaatttgtaaattatttgataaa attttatggTTTTGTAGAGTATATACACGATTATTTAGgggattgttttc tttttaatttatatTACAATTATAAATCAAGTATTAGCAAAACATCTCAA CTTACTCATTGAAAACTCTTCTTTTCGccatttcatttctttttttgaat aaatggttttaatttcacttttgcggaTATGTTTTTGCATAAAATAGCTA TCGATCCCTAAGGGTGAGGAGGCTGGGTAAAACAGTAAGAAGTTGGGTTA ATGTCAATCATCTGAAATTTTTACATTGATTTTCTTACagatagaaatat tttgaaaacatttttttttaataaactaaAATAAATGATTGAAAGGATGT CACAGGGCCTTAGCTCATTATTTCGGTAAACTTGATCCAAACCCTTTGTG GTGTTAAGGGTTCATAGTTATTTCTAGAATTTTGGTTTGGTTTTCTTCTa atgaatttttgtttacatgAATGGAATCTTTCTTTGGAACCTTgctttta aacctaaaaattgtAGATATACTCCTGTTATTTTTTACTTATAGAGTTCT AGATAAAAAGTATTAATGTTAAAATCTAATGGGAAATACCTCTTCGGAAA ATACATGCACTGAGCTCTCAGTTTTATCCTGGAATATTTGGTTCGGTACA AGCCAGAAGCTTGACCAGCCAGAGCAAAGATGGACAGAATTACTCAACAT TGTTGTCAATAAGAACCCTGACTTAATTGGTCTTCAGGAATGCACTTTAG ATTTCttaaaagttgtcaaaaaacATTCCAGATTCTCTGATCATTACGTT GTTGTCAATGAGAGACCTTTATATTCCAACTATTTTGTTATgctttacaa aaagaaagatttgaaaatcttAAAGAAAGGGACAATCAAATTGAAAACGA CTTTGGAAAGACAATGTGAATATATGGATGTCGAAAAAGAAGGAGCTAAA TTTCGTTTTGGTACTGTTCATATCGAGTCCTATGTCACATCACCAAATAT CAGGGAAATTCAAATGGAAGCCATATTtgatattttacaaaagaaaaNAT GTCAATCATCTGAAATTTTTACATTGATTTTATTACagatagaaatattt tgaaaacatttttttttaataaactaaAATAAATGATTGAAAGGATGTCA CAGGGCCTTGGCTCATTATTTCGGTAAACTTGATCCAAACCCTTTGTGGT GTTAAGGGCTCATAGTTATTTCTAGAATTTTGGTTTGGTTTTCTTCTAgt gaatttttgtttacataaaTGGAATCTTTCTTTGGAACCTTgcttttaaa cctaaaaattgtAGATATACTCCTGTTATTTTTTACTTATAGAGTTACAG ATAAAAAGTATTAATGTTAAAATCTAATGGGAAATACCTCTTCGGAAAAT ACATGCACTGAGCTCTCAGTTTTATCCTGGAATATTTGGTTCGGTACAAG CCAGAAGCTTGACCAGCCAGAGCAAAGATGGACAGAATTACTCAACATTG TTGTCAATAAGAACCCTGACTTAATTGGTCTTCAGGAATGCACTTTAGAT TTCttaaaagttgtcaaaaaacATTCCAGATTCTCTGATCATTACGTTGT TGTCAATGAGAGACCTTTATATTCCAACTATTTTGTTATgctttacaaaa agaaagatttgaaaatcttAAAGAAAGGGACAATCAAATTGAAAACGACT TTGGAAAGACAATGTGAATATTTGGATGTCGAAAAAGAAGGAGCTAAATT TCGGTTTGGTACTGTTCATATCGAGTCCTATATCACATCACCAAATATCA GGGAAATTCAAATGGGAGCCATATTTGATgttttacaaaagaaaactaAG GACATAGAGCTTGCCTTTTTGGTTGGTGATTTCAATTTCCATGAAACAGA CGAAGAAAATAAGTTTATAGAGAGTAGTCAATTTAAGGATACATGGCGGG TTGTCCATGAAGATCTAGATGGTTTCACCAAAGATTCTGATCATAATGTT ATGAACCAAATGTTCCATGGGAAGCCTATtacacagaaaaagaaaaggat tGATCGAATTTTGTATATGGAGGACACCAATGATGTGAATCATTGGAAGG CAACTCAATGCCAAGTTATTGGGGATGAGATATTTGATGAGATCGTCATG CACGATCAAACCAAAGTTTCCATGTTTCCTTCTGACCATTATGGTTTACT TGCtaagtttgaaaaaaacttaAGTTAGGTGTAAATTTTTTCCCTAAAAg aactgttttgttttgattgataagGCATTTCCTTTGCTGATATTTCTACC ATAAATcggattaatttttttgaataattttgtgTAGATGATCAAAAATC AGTTGAAAATGGACCTGTAGCAAATATCAAAATGTACGGTATATTTTACG TGGATTTAGTTTCGTAAGTCACAGTAATCTTTAAACGATTTCGttagatt tatttttttccaaaaaaggataGTTGTAAAAATGTGGAATTAAATCTTGC AAAATTAATCGTTCATAGTACTTAAATTGTACGAAATTATTTGCGAAATC TTGGGACAGTAGAACAATTTGGGAGTGTTATATTGTTGTTATCctattta tatttttgtatgatatgtttttctcaaaaaatttctatattttgtataat tttttgtaattcttatagatatattataaagattttttttaaatgtcgtA AAAAGAAGCACTAAGAATTGGATCCTGTATATTTTTTCAAGAGGTCcctt aatttgaaataaaacgaAAAACCACGTGTTACCACCCAGTAGAGCTGAGT TACTTGAATTTGAGTTACAGTTTTTTCAGATCAACCATTGTTTTTCTTGT TCATTTTagattcaaaaaaacttttatcaacaaaaagaaagaaaaacaaa caaacacatcAAAAAATGGTGTTAGGAAATTGGACATTGACCGAAGCAGT TGACCAGACAGCTTtctttgaagaagaagaagaaaatcaatatgAATGCG AAGATGAAGAAACTAGAACACAATATCAATTTCATTTTATGGATAACCAC GATACCAAAAGGTATGGACTTGTTGATAGGGTCGCTAAGCTTTATATTTC CCTAGAGACTGTTTCTTGCTTCCTGGACAATAAATCTGTTTTGATAGGTG GGAAATTTGGTATTCTATATAAAGTGCAGTTAATCATTATGCCAAAAAGC TGCAAAAGGTTAAGACTTTTCGGTAGAACTAGACCCTAAGATATTGCGGG TATTGGTGTGTTTGTTCGGGGGAGGCTTTGATTAATCACCTgatatagaa aaaataattacaagagaaaatattatataaacaAATTTACAGAGCAAACA GGCTCTGGCGCAATGAATTGTGGGTAATTACAGACTGAATGTGCTCTAGT AACTACTTAGCGCTTGTCCAATGAAAAATCGTCAATAAGATTTGGACCCA TTGGAAGACGTTGTTAGTCCCACCCCGAATGGATCATTTATAGCGCTACG AGAGAGCCCAAGAGATTTTTATATCCTATGTTCTTATTAActgtttaaaa aacaaaaaatatttcttcaatCTCTATTTCAGTTTTGAAGCTGACGAGCT CATTATTTGCATTGGCAGCGGAAACGCTTTCATTGAAACTTACACAAACA TGGGTGACAGTCAACACATAGCCTCATATCTCCAATCTAAAAGCGACTCT GATTCATCTCATAATAAGAGCAGTAAAAAGAACTCTTGTCATGTTTATAA AAGCCTAAAGACATTGATATGCAGCCTGAAGTATCACATTGAACCGAAAG ACCTTCACAATTGGACATCAACGGTAATTGTTATAATACTGATTTGTTTT AGGTATTATTGCTTTGTTTTCATTTGACCCAGGGgtcttatattttattt aggCCCGGCGAACGGTGAATTTCACCGGTCTAAAAATTCGGTTTGCAGCC TCAAGTACATATTCATGTTAATCAGggcttgctaagaattcgccgGTCTA AAATCTACAATTCGCCGAATTCGTTAGcctatcaaaaagcaaagtcaAAC CCCATGTCTGACCTCTGTCGAACCTTTTAGTTTTGCCCTGTGGAAGTCAG TGTGAAATTAGACTAATGTNTAGTTTTGTCCTGTGGAAGTCTGTCTGACA TTAGACTCAACTAACCTAATATTTGTTCTTTCTGGTAGTTACTGCAAAAT ATAAATGTCAACAATATCAAAGTACTTTGTCAATCACCCAAGTATTTACT GCGGAATCAAAGAGAGTCTGACCATGGCGATGTAAATGATGTTGACGTAC TGAGGTGTTTGTCGTGTCATGCTGAAAGAATGGAAAGTCCCTCGAAAGTG AAAGTTctggaaaatcaaaatattattaaaGATTTGCCAGCAGCAGgtca gttttttgttttcattttgagcaaatttcaaatttcaactctctctaatt cgaatttctatTATTCAATTCTTTCTGTAAtccgaactaaaatattggtc ccctcagctggagATTGGTtcaaattactctctgtaaatcgaatctttct cttattcaaaaagaatcttttgtcccttgaagatcgaattaaagagagtc aactgtatgttTTAATCATTGCAACACCGTATATCCTTTTCCCTCAAACA CTGCAAGCAGGAAGCTAAAAGAAATCTCAAGTTCAAACTTCTTATTATAc ttcctattcatgatatgcaccattgcaatgtcttctgacattacatcatg gacccaatagctgattggttgtaagtgacgtaaaatcagtcaatacgtca tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCGGCggccgccgtaccagattttcacaaaaatacccgaa gtttttctcttcgtcggtaaaattgctataaaatcgcttaaatttcctca ttcgccgtaccagatataaaaagcttccgtcgtgcctgctGATTCGTTGA AATTGACGTAATGACTTATTTTaagtcacttacaaccaatcagctgttgg gtcggtgatgtaatgtcagaagactaTCATGAATATActgctttattttc ttttttttatagtgTTCAACTACTGTTCAGCGTACGAGAAATCGTGCACC CTTTACATAGCATACACTGAATCGCACTTCGTTGACGTCTTCACGTTGAA ATGTTTTGAACCTCTTCTTAAGGAAGTTACTTTATCAAATCAAGTAAGTA GATCAAAGGgattgtttaaatttttctttttggaaaattggcTTGTTTCC TTATTCTTTCTTGAagttatcttttttttctcgccttaaagtcaaaattc agatTTGAGCATGTCAACTTAGACCATATGTCAATGTAAGGAAGCTcttt gccaaaaaaaattttaaaccatcTGACTATCAGTTAAAAACACGGTAAGG TTTTTAGCGGAAGAAAAAACTCCGTTaagattttttcattgaaaaataaa aagtggGTTGGCCATGGTCTAGTATGGGAAATTTTGAATGCTCACGGCCT TTTTTACTTAGCTTACCAGATCGAGCTTGCCCGGCTTACCTTCTTACCTT TGACCAACCTTTTTACACcttgaaaacattattttcttctAGCCCGAGgc catctgaaaaaaaatttccataactgTTTCATGTTTCTCTTTTCTAGGTT TCGGATAGTGTTTTGGCTACAAGGctgaaaaattttgaaggttATGGTGT CTCTAAtaatgtttatatttgatatGATTTGTAAATAAGTGAAATAGAAC TGTAAATTTCATCTGTCTTTAGATAGTGTCCATACTGTTTAATACCTGAC TTTTACCGTTTCGTACCCTGTTGTTTCGAGTGTATGACAATATAAATCTC TTatgaattcctcgagggaattctattg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000731XLOC_000731Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001368-exon-sc0000010-1491911889:688970..689002TCONS_00001368-exon-sc0000010-1491911889:688970..689002Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1510915933:688970..689002TCONS_00001368-exon-sc0000010-1510915933:688970..689002Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1575043694:688970..689002TCONS_00001368-exon-sc0000010-1575043694:688970..689002Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1491911889:699779..699980TCONS_00001368-exon-sc0000010-1491911889:699779..699980Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1510915933:699779..699980TCONS_00001368-exon-sc0000010-1510915933:699779..699980Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1575043694:699779..699980TCONS_00001368-exon-sc0000010-1575043694:699779..699980Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1491911889:700502..700742TCONS_00001368-exon-sc0000010-1491911889:700502..700742Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1510915933:700502..700742TCONS_00001368-exon-sc0000010-1510915933:700502..700742Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1575043694:700502..700742TCONS_00001368-exon-sc0000010-1575043694:700502..700742Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1491911889:701108..701315TCONS_00001368-exon-sc0000010-1491911889:701108..701315Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1510915933:701108..701315TCONS_00001368-exon-sc0000010-1510915933:701108..701315Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1575043694:701108..701315TCONS_00001368-exon-sc0000010-1575043694:701108..701315Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1491911889:702182..702312TCONS_00001368-exon-sc0000010-1491911889:702182..702312Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1510915933:702182..702312TCONS_00001368-exon-sc0000010-1510915933:702182..702312Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1575043694:702182..702312TCONS_00001368-exon-sc0000010-1575043694:702182..702312Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1491911889:702767..702997TCONS_00001368-exon-sc0000010-1491911889:702767..702997Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1510915933:702767..702997TCONS_00001368-exon-sc0000010-1510915933:702767..702997Clytia hemisphaericaexon
TCONS_00001368-exon-sc0000010-1575043694:702767..702997TCONS_00001368-exon-sc0000010-1575043694:702767..702997Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:688970..702997 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
97.5654 86.2123 102.826 105.382 10.7562 8.58904 12.7886 13.3166 18.9426 18.2611 11.6471 9.87504 8.07855 6.04816 12.0137 11.868 24.2159 22.6405 6.68004 6.65277 13.535 13.3914 33.7267 30.1224 25.9326 22.3659 8.68685 7.99634 13.2966 13.9334
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001368 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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