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TCONS_00001338 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001338
Unique NameTCONS_00001338
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1877

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001338 ID=TCONS_00001338|Name=TCONS_00001338|organism=Clytia hemisphaerica|type=transcript|length=1877bp
TAAACTTCGAAGCAAAGTTTATCATGTGaatctttcaaaaagtttttcat
caGGGAGCGAAGAagAATTGTGGAACAATGCACCGCCCTTACACCACGCC
CATCATCATACCCACCACTCTCATGAAGCACCACACACGCCCAAGCAACA
TGACGGTGATTGGGCGCATTTTTCACCTCAAACAGAAGATGTACCTACAT
CGAGTCATCCCAATGCTGGTGTAATCTCGTCTTCNACGGTGATTGGGCGC
ATTTTTCACCTCAAACAGAAGATGTACCTACATCGAGTCATCCCAATACT
GGTGTAATCTCGTCTTCGGTTGAGTCGGACAATCAATTGCCACCGCCATC
GAATCATATCGATATACCAAGAAAGAGAAGCCAAACGGAGAGCATGGCGT
CATCCAGCATGGCATCCAGTATCCCAGAAAGCACGAGTAGTGTTGACAGT
AGTTCCGACAATGAAGAAATGAGAATCACGCAAGAACAAAGAGAATATTA
CACCAACCAATTCAAAAGTTTACAACCCAATGAAGACGATGTTATCAAAG
GTCCCCAAGCTCGTGATTTCTTCTTGAAGTCGAATCTAGCGATGGAAACT
CTTTCTAAGATCTGgCATCTATCAGACTTGGATAAAGATGGCGCATTGAA
CTTGGAGGAGTTTCAGATTGCAATGCATCTGGTTGTGTTAATTAAACATG
GTTACGAGTTACCGATGGTTTTACCTCCTTCCCTTCTTGGTCAAGAGCAA
GTCCATCAAATGGCAAGTCAAGATGGTGTGGATATGAGCGATGAAGATGA
GAAATTGATTTCTGATGACGAAAAACAAGAATCTGGTGATTGGTCCGCTG
AATTTGATGCTACGGATGGGGCACCAATTGATCGTGGTGAACGTATAGTG
CAAACTTACGCGCAACCCTCCCCTACGTCCGTCACCGTGCCGTCAGAAAC
TCGCGTACAACCCGTCTCGCACATGATCGAACAACAACAGATCAACCATG
ACGACGAAAACGAATTACCTTCCTCGCCTGGTGCCTTGGCTTCTCCTAAC
GATGTCGCCGCGGCGGGTGGCAAAATGACAGCTATCGCACGACCCCGTGT
AACCGCTAATAAAAACGTTAATCTGATGGATGCGTCACCATGGCAGCTCC
TGCCACCACCGTCCGGGAAAACTGGCAAATTCGGTGGCCCGAATGGTGGT
ACAACCGCGAAGAAAGCCTTGAAAATGGATAGTGTTGATAGTGAATTAGA
CTCGGCGGGTGTCATCAGTGATAGCGAAAATAATAAACTGGTCTCGATTG
ATAATCACATGTCCCAAACGACGTCGCCGACAAATGGCGACAGTAGTCTG
GATAACCTCGACGACGACGAACATTTGACGGACGACCACGATCACGAACG
TTTGAAAGTCAAGAAAAAGGATTCGGCATATTTCAGGAATTTGTCAAAAG
AGAAATCGCGTTCGATTGATAGCTTACGGTCAGATATTTCGGAGAGTAGC
ATGTTTGAATGGAAGAGACAATCCATTAGACGAGAATCGAGACCAAGGTC
ATTTACAGGGGAAAGCACACACGACACACCGCAATTCGAATCACCGCCCG
TCCCACCGCCACGAACGAATAAAGGACACGCCAGGGCGTCATCACTCGAT
TTTAATCAAATGTTCCATAATCGTTCACCTAGAGTCAGTTCTGAACCGAA
ATTACAAGTAACGACACCAACTGACGGAACAGGCAAGAATCCGCCACAAA
AACCACCACGCTCAAATCCACCAAGCACTTCTTCAACTAATAACTCGTCT
GCCGCCCCCACTGCTGCAGCCCGCCCTCGTTCGTCCAAGGGTGATGAATA
TCATAGGTCACGATCACTTGATGTAAG
Run BLAST on NCBI

transcript from alignment at sc0000010:229400..238625+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001338 ID=TCONS_00001338|Name=TCONS_00001338|organism=Clytia hemisphaerica|type=transcript|length=9226bp|location=Sequence derived from alignment at sc0000010:229400..238625+ (Clytia hemisphaerica)
TAAACTTCGAAGCAAAGTTTATCATGTGaatctttcaaaaagtttttcat caGGGAGCGAAGAaggtctgtttttttttatgttaaaaattcttttgagg TTTTCAACAGTTTGTTTGTTCCCTCTTATTACACAACTTATAGGGTCCAT AATGTAATATAGCCAAAGGGGACCCCCAGGGGACCCCTTTTAAAcaataa gaaaaataacaaaatgggTATAGTTAATGTCGGATGTTTGTTTATGTACA AGTGTATGTGGTGtcactttttcacaaaaaaatctgACTATATTTTTATA TGTTTGCGTGTGTTTGCAGATGCTGTAATAAAGGGGAACAACATTGTGTT GAACTATTGGTCACAAGGTTTTTAAAAAGGAAGTGacaattgatttttta aagttttttggatTCAGTAAAATTGTTACAAAAAAGCTAACAACTTCCAA TTATCCAAAGCTAATCGCTGTTCGCTGTTCGACTAAATACCAAGCAGCTT TTTATTTGAGTCATGGCTTTAAATTGCTTGGTCAATTTTAACGATTTAGA ATTGTGGAACAATGCACCGCCCTTACACCACGCCCATCATCATACCCACC ACTCTCATGAAGCACCACACACGCCCAAGCAACATGACGGTGATTGGGCG CATTTTTCACCTCAAACAGAAGATGTACCTACATCGAGTCATCCCAATGC TGGTGTAATCTCGTCTTCNACGGTGATTGGGCGCATTTTTCACCTCAAAC AGAAGATGTACCTACATCGAGTCATCCCAATACTGGTGTAATCTCGTCTT CGGTTGAGTCGGACAATCAATTGCCACCGCCATCGAATCATATCGATATA CCAAGAAAGTAAGaacgtttttctaatatttctaTTCTAATGACAGCATA TTTAGGGTTTGAAAATTGAAGGTTGATAATTACACTTGTAATTATACATG GATattaccattgagtttaaagccgcTAAAGGGGCTTAATGCTGATTAAG CTACTTATTCTCCAAAACTAATTTTACCAGTACGAAAATTATATTGTCGA CTTCTAATGGACAGAAAGATTTAATAACGGATAGCCCATGCCATAGCAAA CAAGCTTCGTTAGATGTTCGCACTTGGAAACTCTATTTGAATTATTGATA GCTTTGTAATTTGATTATCGTTGAGCTGCTGtgcagaaaatgcaaaaaaa attatcttatagaaaactttttaaaagtctTAAAAATATAACGAGAAAAC ATGTTAAATTTATTAGAACTTAGATGTTAAAATCTTTAACATCAAATATT GTTCACGTTTTGTTAGTAAACAGTTCTTTAATAGGGAAGCTAAAAATCTT TGAATGAAGTTGTGGTACGAGTGTGTACGAgtacttgaaaattttaaact tcCTCCACCAGTTAAAAAGGAGATTGTATGAATTTTGAACGTCTGTGACC AAACTTTACGAGTATTTATTATTCCCTTCCTGCTTAATACCCTCTACGCA AggagggggtcaagcagtttgTACACGACTCCCATGAAGCTTAGAACGGT GGTGGTTCACTTTCAAAAGTGACAAAATGAAAATCTGACCTCGAAAGCAG TTAATAGATTGTGTACTTAGTGAAAGGTAGTGGTTGTCCTTTTCAAAATC AGTTAGTAGACAAAGTGTTCCGGAgtaactgcttgaactcctctGTTTAC GCCTTCACTTTACCCTAAAGCCAGCAAGTTAGTATTCTCAATTCGGAATT TTTGAAGAACTGTTCGTATGCATAACGTATTTACGTATTTACATAGTTGA CGTATGCTAAACATTCTGAGCTTTGGCAGGTTGATTGCAGGTCAAATTAC TAGCCGACCTTAACCAAATCCTGGGGATACACTgagcagtgccgtaggaa gcattttaatattggggggggggggccccgggggggggggggggaggggg gggggggggaggggggggggggggaggggggggggggggagggggggggg ggggaggggggggggggggaggggggggggggggagggggggggggggct gaagtttagtgacgccgcgagggccaaccatggtttggcccgagggggga aattttgaaaacttgagctctagattgcttgaaaatgcactcaaaacatc cccttataagacaattatgacaaattaaaaaagaaaaactttgctttttg caaaatagccatttttgaaaaaattatttgggggggggggagctgaagtt tagtgacgccgcgagggccaaccatggtttggcccgaggggggaaatttt gaaaacttgagctctagattgcttgaaaatgcactcaaaacatcccctta taagacaattatgacaaattaaaaaagaaaaactttgctttttgcaaaat agccatttttgaaaaaatttttggggggcatagccccccttgcccccccc ccagttgctacggcactgcactGAGTGAcctacacctttttttataagga accttaacgaGCTCCGaactctgagcctggagttccttttTTCTCCAGAA AAATTTAGCCTCAAAGCTCCTTATCGAGCTCCTTATTCacttagctgcta agtttggactGATTTAATACAGACGTTTATTGAATGTTGTTTCatcaata ttttgatgatattttgaactttttatttaGGTTTTTGTGAATGTGTGTAA GTTCAAGTTTAACTCTTACtgttctcagcctgagcagtttcttaagttcc ttataaaacgtgttccttttaaaaaatgtgtatactTATTTGCTAAATAC TCATAAAGTTTAAATCTGCAGGGAACGTAGTTGCGGTCTAACCTACCTTT CTTGCTACTTCGTCAGCAGGTCAGCTTACTTTTTTACTACAGCTCCGTAG TAGTTTTTTGACAGTATTGAGTAATCTACAACTTGAGAAATGAAACGTCA TCACACATTCTCTCATCATTCGTCACTGCCCAAATGAGATGTACAAGAAC CTCTGCAAAGGTCAAACTGTTACAAGTTGTTAATAGAACTGTTGACAAAA GTTTATAGATGTAATTTTAATGCtgctttttttacttttgtagTGAATTT TTTCTATTCTGTGGTAATAGATTAGTAAGGCATATTGGATGTGAATTAAA ACGTGTGTTGATTTACATAATTGattgacaaaacaaaaaaaagttttttt gagtcATAAGAGATTTTGCGGCTTGGGTTTTCTTTATCTGAATTTGTGCT ACTAAAGAGCTACAGTTAATGTATGTAGTATGAAAGAGACATAGAGttaa aaaaatagagaaaaaacggtttttaaaaaccctttttttaatCTCTATAA ATATAAGAGTGGCTTATTACTGTGATATTAGAAAAAAAGAGTGCCCTGGA CTTGCGTTTTTGTTGTGATAAGCTATAAAGAGTTAGAGTCAGAGAAAATT TGTCAATGAAGCAGTGACTTGTATGGGCTTAGATTGAATAATTTATAGAG AATCAAGTGTTTTTTTGGTTTGGTGCCATGGATGTTCGACAATCTCGTTC AAGACCATATTATTCAAGTTATCAGTAAGTTATTGTAGGGTCAGCTATAC ACGCTCATGCAATGTTTATATTTTGTCCCCAGAAATTGGGGTCTGTCATT CGTCAACATTTGATACGTTTTTTCTCCTTTTCAACTTTTAATTCTGGTGG TTCTGCTACTAGTAAAACAGAGTAAGTTCTTTCGTTTACAGACTACCTGC CACTGAGTTTAAAGTGCTTTTATCGCATTCAAATTTGCTCTGAATGCTTT TCAGTCCATCTAAAATAAACGTATAATATTAATCAATACCGAGTTTGACC CCTATAATAAAGccggatgagctggagtttttacaagctggGATGCGATT TTCTTTGTGTGTATTTTACGGAACAAGCACACCCGATATGttatactttc aaaaaattctctaaCCCCAAGttccgaagtcccgagttgaactgtgccaa cactctccaaagtataagcctttgaaattttgaggatGGTGACGCCTATT AGAAGGCGGTtctctgaaaaatctttttctttaagAATTCCTTTGATAAG GGGGCCTGGAATTATTTTGGAGAaactgaaattatgacgtcacccgcaaa ataactcggaaaaaataacttgggaaaaaataactcggaaattCCAGGCC CCTTCGATAAGTTTCACTGCACTACGATATTCTAAGTGGCTGAGTCGGTT TTGCTCCAAAAGGTTCTGGAAATGTAGTACAGTAGAGGAAATTTTCCGTT CAAGGAGCTTAGGCATATTTTGTATCAGTAGCATCAATAAGTTCAACATA GTTCGTTTCAATCGatcaaatcaaattcaaaagagGCTATTAATCTCAAT ATTACCTACTATGCTTATATCTCTAAGTAGTGGGTAGCTCAAAGGAAGAG CATTCAGCTACGGTGTGTTCGTGGGCTCAATTTATCGACGGGTCGCAAAC TAACTATATCTCTTTTTCCCTCCAGGAGAAGCCAAACGGAGAGCATGGCG TCATCCAGCATGGCATCCAGTATCCCAGAAAGCACGAGTAGTGTTGACAG TAGTTCCGACAATGAAGAAATGAGAATCACGCAAGAACAAAGAGAATATT ACACCAACCAATTCAAAAGTTTACAACCCAATGAAGACGATGTTATCAAA GGTAACGATTATCgcaggaaaaaatctttaaatcacACTCGTGTGAAAAC TGATTTCCAAGGGTGAGATTCGGTTCGTTTTCACACTATTTGTTTACACC TTGTTGAATCAATTATCAAACTAAAAACTCAATCTGGAATCACAATCTGA CTTAATTCTTCTTAAATTTGAGGTGTTTTAATCTAATACTTAAATCATCA TGGTGTAAACACTAAGGGTGCTATTTACGATTTCACACCCGTGTGAAAAC GAACCGAATCTCACCCTGTGAAATAAGTTTTCACACGAGTGTGATTTAac gattttttcctgtgtattaTGATAGTTAATGTTTTTGTCCGAAAAGTTAT ACGCCCTTATTTTTCGACCTCGTCCTTCCACAGCCTCAAAGCGTTTAAAT AATGATGAAGTTTTGTTAATAATGATGATTCTAGCTCATTAAACTATAAC TGATTCTGTTTCAACTACagtgaagtttttttttaactcgctggaacctc tataactcgataGTTTCCTTAAAACGAACAAGTTTGTCTTGGAGACTTCC AATGTATTTGTTTCATATCAAGTTGTATAActcattgaatttttttgtct aGGTCCCCAAGCTCGTGATTTCTTCTTGAAGTCGAATCTAGCGATGGAAA CTCTTTCTAAGATCTGGTATGTATGTTTCCCTTGTAGTAATTATCTGTCA ATTATAATATATTACCCCCTCTATACATGTAAGGTCTTCATTCGATTGAT CTTAAACAAGCTCATTACAGCTCGCTTTGGTGCTTTCAATTAGAtttgaa ctttttcttttcGACGAGATTTGTCAATACAGTGGAAATTTGATTATTGA AACTTGCATATATTTCTCTTTCTCAACAACCCTTAggaatttattttatt aatcAAAGTTTTATTCAACCTCGTCCCTGTGTAAaacaggctttatttac gttagtgattgacgccagagaatatcctggtgttggctgatgcgagacTA TCATCTCAAAGTGAGAACTTctcaaacaacaaaaaagtgaCGCATTCGAA AAGCAGACAATGCCAGGGTACTATCTGGGGTTATCAGTAATAAGCATAAA TAAcagataatacgcagggaatgAGGTTGTGTTTTATTGACAAATTGTTC ACAAATAATCGAATAACctctttaaattaaaaatttcaggCATCTATCAG ACTTGGATAAAGATGGCGCATTGAACTTGGAGGAGTTTCAGATTGCAATG CATCTGGTTGTGTTAATTAAACATGGTTACGAGTTACCGATGGTTTTACC TCCTTCCCTTCTTGGTCAAGAGCAAGGTACGTTGTTAGTCTGCCGTCAAA ACATGCCTGGTTATTTTAAAATATCATAATTTGACTTTATCTTTAGATAG TTGATGATTAGCTTAAGGTTTATTTCCATCTCAAACCATTCTAAGGTTGT TGTTTTTTAGTGGTCGCTAACTGGATttctatataatatatattcatgat atgcaccactgcaatgtcttctgacattacgtcatggaaccaatagctca ttggttggaagtgacgtaaaagcagtcaatacgtcactctCAACCAATCA gttattgggtggaacggaagacattgcaatggcgcatatcatgaatagaa taTTATTTTTATCTCAAATGTCTCCTAATTGGAACAAGTTAACAATACGT TAtaatatataaaggtcagtggttataccttgactcgaacaaatttgtgt tcgcTGCGaagggttcgagttatggatacTCCtctgtaaaatgttttttt ttaccaccgggaATCTAGTATTGTATCCGAATCCATATAATCCGAAAACA GGTGACTTTTTATGTTTCTGTATGACTTTTAAAACTTGTCCTTTCATTAT GTCAGTCCATCAAATGGCAAGTCAAGATGGTGTGGATATGAGCGATGAAG ATGAGAAATTGATTTCTGATGACGAAAAACAAGAATCTGGTGATGTACGT AACGCTCTTTACGTCTTGCTATTTACATATTATGGAACACGATAGAGTTT CAATAGTATTCCAAGATAATTAAGATAATATTATCCCGAATAGTTACTCC TTCTCGGTTTATAATCCGCTAAAAGTGGTGAATTTTGACAACTCAGAGAA ATTGAAAGGTTTTCCTTCACTCCGCTTTTACCATGGGATTAAAAACTGTA GACGTACAGAGGAGACAAAAACGTTCTGACGATTCGCGGATAGGATATAG CGCTAGAAGTGTTGTATAGGGTATCTTATAAAACTGTTTCTCCTTTATTT CTAGTGGTCCGCTGAATTTGATGCTACGGATGGGGTGAGTTGATTTATGG TTTAGGTCTGGCTGTACTTATAGTGCAGTGACCATtatataattatattt tataGATATTTAAATGAGATTTATCATGTGCTATAGCTCGCTGTTTCAAA ATACTACAAATTTCGATTTGGTTATTCCTTACCACATTCCTTCTCCACAT CATTCCATATGATATGTAGGTGATTTTCTGTACTgctattttcaaaagat aacCTCAATCTTTCAGTTTATGGGAACCTTTACTTGAACACTCCTACTTT TTCACTGCAGGCACCAATTGATCGTGGTGAACGTATAGTGCAAACTTACG CGCAACCCTCCCCTACGTCCGTCACCGTGCCGTCAGAAACTCGCGTACAA CCCGTCTCGCACATGATCGAACAACAACAGATCAACCATGACGACGAAAA CGAATTACCTTCCTCGCCTGGTGCCTTGGCTTCTCCTAACGATGTCGCCG CGGCGGGTGGCAAAATGACAGCTATCGCACGACCCCGTGTAACCGCTAAT AAAAACGTTAATCTGATGGATGCGTCACCATGGCAGCTCCTGCCACCACC GTCCGGGAAAACTGGCAAATTCGGTGGCCCGAATGGTGGTACAACCGCGA AGAAAGCCTTGAAAATGGATAGTGTTGATAGTGAATTAGACTCGGCGGGT GTCATCAGTGATAGCGAAAATAATAAACTGGTCTCGATTGATAATCACAT GTCCCAAACGACGTCGCCGACAAATGGCGACAGTAGTCTGGATAACCTCG ACGACGACGAACATTTGACGGACGACCACGATCACGAACGTTTGAAAGTC AAGAAAAAGGATTCGGCATATTTCAGGAATTTGTCAAAAGAGAAATCGCG TTCGATTGATAGCTTACGGTCAGATATTTCGGAGAGTAGCATGTTTGAAT GGAAGAGACAATCCATTAGACGAGAATCGAGACCAAGGTATGACTCGTTT TCCCAAAGTTGAAACAACTGAATTATAGTGAGATTATTCTCACTGATTCT GATTTCGAtacattttgttattttttatatttattttaagGAAAACGTCT TCTTTGTATTATTCCAATTGCAAAATCAATCGTTGAAGAACAAGAGTTAT TCGGTAGGTAAACTTTCTCGTAATACTTTTTCCTTATTAGGTCATTTACA GGGGAAAGCACACACGACACACCGCAATTCGAATCACCGCCCGTCCCACC GCCACGAACGAATAAAGGACACGCCAGGGCGTCATCACTCGATTTTAATC AAATGTTCCATAATCGTTCACCTAGAGTCAGTTCTGGTGAGTGCTAATTG CATTTTCGCGGTTCATTtctctgttgttttttttacgAGGAAAGTaagag aaaaattgaaacacTTATCAACCTTTAAAGCATTAGAACACTGGGTTCGA GTCTACTAAGATTAATACAGTTACATTCTCAAAGACAACGAATTCTGACc taatttttcttgtaaatttcTTTACCAGTCCCTTCGAAAACAACCGTGCT TTTATGGGTTGATTGACGTCAAACATTTGAAATGctaagaaaagtgaaaa agaattgatatttttttagtcACTCGAGCATTAGATATCTGCGAGATAAT TGTGCCTGAGTGGTTGTAATCTTTTAGTATTATGACATACATCAATAATA AGTAACTGACTTTCAAATCGTTTAACGCACGTTGAATTTTCTCTTTTAGA ACCGAAATTACAAGTAACGACACCAACTGACGGAACAGGCAAGAATCCGG TAAGCCCTTTGAATTCTACATTCAATACTACATACACATTATGCTTAATT TTTGCATTATAACTTCACGTAATTTAACGCAGTAACTTcactctattcat gatatttatgacgtaatgttttcgacggaaacaccccggtttttgccagt agtggcaaattggAGCTAtagaaaaattgctcaaaatttgcCACAACTGG CAAAAATGGAGgtttttccgtagaaaacattacgtcatgaatatcaagaa ttctCACTATATAATATGCATGTGATTAACATCAATTTTCAGCCACAAAA ACCACCACGCTCAAATCCACCAAGCACTTCTTCAACTAATAACTCGTCTG CCGCCCCCACTGCTGCAGCCCGCCCTCGTTCGTCCAAGGGTGATGAATAT CATAGGTCACGATCACTTGATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000722XLOC_000722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001338-exon-sc0000010-1491911889:229400..229464TCONS_00001338-exon-sc0000010-1491911889:229400..229464Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:229400..229464TCONS_00001338-exon-sc0000010-1510915933:229400..229464Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:229400..229464TCONS_00001338-exon-sc0000010-1575043694:229400..229464Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:229949..230257TCONS_00001338-exon-sc0000010-1491911889:229949..230257Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:229949..230257TCONS_00001338-exon-sc0000010-1510915933:229949..230257Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:229949..230257TCONS_00001338-exon-sc0000010-1575043694:229949..230257Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:233925..234100TCONS_00001338-exon-sc0000010-1491911889:233925..234100Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:233925..234100TCONS_00001338-exon-sc0000010-1510915933:233925..234100Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:233925..234100TCONS_00001338-exon-sc0000010-1575043694:233925..234100Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:234702..234765TCONS_00001338-exon-sc0000010-1491911889:234702..234765Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:234702..234765TCONS_00001338-exon-sc0000010-1510915933:234702..234765Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:234702..234765TCONS_00001338-exon-sc0000010-1575043694:234702..234765Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:235289..235425TCONS_00001338-exon-sc0000010-1491911889:235289..235425Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:235289..235425TCONS_00001338-exon-sc0000010-1510915933:235289..235425Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:235289..235425TCONS_00001338-exon-sc0000010-1575043694:235289..235425Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:236005..236093TCONS_00001338-exon-sc0000010-1491911889:236005..236093Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:236005..236093TCONS_00001338-exon-sc0000010-1510915933:236005..236093Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:236005..236093TCONS_00001338-exon-sc0000010-1575043694:236005..236093Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:236404..236433TCONS_00001338-exon-sc0000010-1491911889:236404..236433Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:236404..236433TCONS_00001338-exon-sc0000010-1510915933:236404..236433Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:236404..236433TCONS_00001338-exon-sc0000010-1575043694:236404..236433Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:236710..237386TCONS_00001338-exon-sc0000010-1491911889:236710..237386Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:236710..237386TCONS_00001338-exon-sc0000010-1510915933:236710..237386Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:236710..237386TCONS_00001338-exon-sc0000010-1575043694:236710..237386Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:237590..237735TCONS_00001338-exon-sc0000010-1491911889:237590..237735Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:237590..237735TCONS_00001338-exon-sc0000010-1510915933:237590..237735Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:237590..237735TCONS_00001338-exon-sc0000010-1575043694:237590..237735Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:238149..238198TCONS_00001338-exon-sc0000010-1491911889:238149..238198Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:238149..238198TCONS_00001338-exon-sc0000010-1510915933:238149..238198Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:238149..238198TCONS_00001338-exon-sc0000010-1575043694:238149..238198Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:238492..238625TCONS_00001338-exon-sc0000010-1491911889:238492..238625Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:238492..238625TCONS_00001338-exon-sc0000010-1510915933:238492..238625Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:238492..238625TCONS_00001338-exon-sc0000010-1575043694:238492..238625Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:229400..238625 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.8271 1.58152 0.499294 0.833548 3.19959 3.31519 4.74482 4.31408 2.76969 3.76898 1.71763 1.13366 5.01155 5.3771 1.97269 2.38881 4.36982 4.59049 5.19751 5.71128 2.27577 3.73271 1.09735 2.56085 3.17212 3.75221 1.35993 1.95934 2.50448 2.17492
Blast
BLAST of TCONS_00001338 vs. Swiss-Prot (Human)
Match: REPS2 (RalBP1-associated Eps domain-containing protein 2 OS=Homo sapiens GN=REPS2 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.059e-25
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1
Query:  460 NEEMRITQEQREYYTNQFKSLQPNEDDVIKGPQARDFFLKSNLAMETLSKIWHLSDLDKDGALNLEEFQIAMHLVVLIKHGYELPMVLPPSL 735
            +E  RIT+EQREYY NQF+SLQP+    I G  A++FF KS L++  LS IW LSD D DGAL L EF  A HL+V  K+GY LP  LPP+L
Sbjct:  273 DEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARKNGYPLPEGLPPTL 364          
The following BLAST results are available for this feature:
BLAST of TCONS_00001338 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
REPS22.059e-2557.61RalBP1-associated Eps domain-containing protein 2 ... [more]
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