TCONS_00001338 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001338
Unique NameTCONS_00001338
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1877

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001338 ID=TCONS_00001338|Name=TCONS_00001338|organism=Clytia hemisphaerica|type=transcript|length=1877bp
TAAACTTCGAAGCAAAGTTTATCATGTGaatctttcaaaaagtttttcat
caGGGAGCGAAGAagAATTGTGGAACAATGCACCGCCCTTACACCACGCC
CATCATCATACCCACCACTCTCATGAAGCACCACACACGCCCAAGCAACA
TGACGGTGATTGGGCGCATTTTTCACCTCAAACAGAAGATGTACCTACAT
CGAGTCATCCCAATGCTGGTGTAATCTCGTCTTCNACGGTGATTGGGCGC
ATTTTTCACCTCAAACAGAAGATGTACCTACATCGAGTCATCCCAATACT
GGTGTAATCTCGTCTTCGGTTGAGTCGGACAATCAATTGCCACCGCCATC
GAATCATATCGATATACCAAGAAAGAGAAGCCAAACGGAGAGCATGGCGT
CATCCAGCATGGCATCCAGTATCCCAGAAAGCACGAGTAGTGTTGACAGT
AGTTCCGACAATGAAGAAATGAGAATCACGCAAGAACAAAGAGAATATTA
CACCAACCAATTCAAAAGTTTACAACCCAATGAAGACGATGTTATCAAAG
GTCCCCAAGCTCGTGATTTCTTCTTGAAGTCGAATCTAGCGATGGAAACT
CTTTCTAAGATCTGgCATCTATCAGACTTGGATAAAGATGGCGCATTGAA
CTTGGAGGAGTTTCAGATTGCAATGCATCTGGTTGTGTTAATTAAACATG
GTTACGAGTTACCGATGGTTTTACCTCCTTCCCTTCTTGGTCAAGAGCAA
GTCCATCAAATGGCAAGTCAAGATGGTGTGGATATGAGCGATGAAGATGA
GAAATTGATTTCTGATGACGAAAAACAAGAATCTGGTGATTGGTCCGCTG
AATTTGATGCTACGGATGGGGCACCAATTGATCGTGGTGAACGTATAGTG
CAAACTTACGCGCAACCCTCCCCTACGTCCGTCACCGTGCCGTCAGAAAC
TCGCGTACAACCCGTCTCGCACATGATCGAACAACAACAGATCAACCATG
ACGACGAAAACGAATTACCTTCCTCGCCTGGTGCCTTGGCTTCTCCTAAC
GATGTCGCCGCGGCGGGTGGCAAAATGACAGCTATCGCACGACCCCGTGT
AACCGCTAATAAAAACGTTAATCTGATGGATGCGTCACCATGGCAGCTCC
TGCCACCACCGTCCGGGAAAACTGGCAAATTCGGTGGCCCGAATGGTGGT
ACAACCGCGAAGAAAGCCTTGAAAATGGATAGTGTTGATAGTGAATTAGA
CTCGGCGGGTGTCATCAGTGATAGCGAAAATAATAAACTGGTCTCGATTG
ATAATCACATGTCCCAAACGACGTCGCCGACAAATGGCGACAGTAGTCTG
GATAACCTCGACGACGACGAACATTTGACGGACGACCACGATCACGAACG
TTTGAAAGTCAAGAAAAAGGATTCGGCATATTTCAGGAATTTGTCAAAAG
AGAAATCGCGTTCGATTGATAGCTTACGGTCAGATATTTCGGAGAGTAGC
ATGTTTGAATGGAAGAGACAATCCATTAGACGAGAATCGAGACCAAGGTC
ATTTACAGGGGAAAGCACACACGACACACCGCAATTCGAATCACCGCCCG
TCCCACCGCCACGAACGAATAAAGGACACGCCAGGGCGTCATCACTCGAT
TTTAATCAAATGTTCCATAATCGTTCACCTAGAGTCAGTTCTGAACCGAA
ATTACAAGTAACGACACCAACTGACGGAACAGGCAAGAATCCGCCACAAA
AACCACCACGCTCAAATCCACCAAGCACTTCTTCAACTAATAACTCGTCT
GCCGCCCCCACTGCTGCAGCCCGCCCTCGTTCGTCCAAGGGTGATGAATA
TCATAGGTCACGATCACTTGATGTAAG
Run BLAST on NCBI

transcript from alignment at sc0000010:229400..238625+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001338 ID=TCONS_00001338|Name=TCONS_00001338|organism=Clytia hemisphaerica|type=transcript|length=9226bp|location=Sequence derived from alignment at sc0000010:229400..238625+ (Clytia hemisphaerica)
TAAACTTCGAAGCAAAGTTTATCATGTGaatctttcaaaaagtttttcat
caGGGAGCGAAGAaggtctgtttttttttatgttaaaaattcttttgagg
TTTTCAACAGTTTGTTTGTTCCCTCTTATTACACAACTTATAGGGTCCAT
AATGTAATATAGCCAAAGGGGACCCCCAGGGGACCCCTTTTAAAcaataa
gaaaaataacaaaatgggTATAGTTAATGTCGGATGTTTGTTTATGTACA
AGTGTATGTGGTGtcactttttcacaaaaaaatctgACTATATTTTTATA
TGTTTGCGTGTGTTTGCAGATGCTGTAATAAAGGGGAACAACATTGTGTT
GAACTATTGGTCACAAGGTTTTTAAAAAGGAAGTGacaattgatttttta
aagttttttggatTCAGTAAAATTGTTACAAAAAAGCTAACAACTTCCAA
TTATCCAAAGCTAATCGCTGTTCGCTGTTCGACTAAATACCAAGCAGCTT
TTTATTTGAGTCATGGCTTTAAATTGCTTGGTCAATTTTAACGATTTAGA
ATTGTGGAACAATGCACCGCCCTTACACCACGCCCATCATCATACCCACC
ACTCTCATGAAGCACCACACACGCCCAAGCAACATGACGGTGATTGGGCG
CATTTTTCACCTCAAACAGAAGATGTACCTACATCGAGTCATCCCAATGC
TGGTGTAATCTCGTCTTCNACGGTGATTGGGCGCATTTTTCACCTCAAAC
AGAAGATGTACCTACATCGAGTCATCCCAATACTGGTGTAATCTCGTCTT
CGGTTGAGTCGGACAATCAATTGCCACCGCCATCGAATCATATCGATATA
CCAAGAAAGTAAGaacgtttttctaatatttctaTTCTAATGACAGCATA
TTTAGGGTTTGAAAATTGAAGGTTGATAATTACACTTGTAATTATACATG
GATattaccattgagtttaaagccgcTAAAGGGGCTTAATGCTGATTAAG
CTACTTATTCTCCAAAACTAATTTTACCAGTACGAAAATTATATTGTCGA
CTTCTAATGGACAGAAAGATTTAATAACGGATAGCCCATGCCATAGCAAA
CAAGCTTCGTTAGATGTTCGCACTTGGAAACTCTATTTGAATTATTGATA
GCTTTGTAATTTGATTATCGTTGAGCTGCTGtgcagaaaatgcaaaaaaa
attatcttatagaaaactttttaaaagtctTAAAAATATAACGAGAAAAC
ATGTTAAATTTATTAGAACTTAGATGTTAAAATCTTTAACATCAAATATT
GTTCACGTTTTGTTAGTAAACAGTTCTTTAATAGGGAAGCTAAAAATCTT
TGAATGAAGTTGTGGTACGAGTGTGTACGAgtacttgaaaattttaaact
tcCTCCACCAGTTAAAAAGGAGATTGTATGAATTTTGAACGTCTGTGACC
AAACTTTACGAGTATTTATTATTCCCTTCCTGCTTAATACCCTCTACGCA
AggagggggtcaagcagtttgTACACGACTCCCATGAAGCTTAGAACGGT
GGTGGTTCACTTTCAAAAGTGACAAAATGAAAATCTGACCTCGAAAGCAG
TTAATAGATTGTGTACTTAGTGAAAGGTAGTGGTTGTCCTTTTCAAAATC
AGTTAGTAGACAAAGTGTTCCGGAgtaactgcttgaactcctctGTTTAC
GCCTTCACTTTACCCTAAAGCCAGCAAGTTAGTATTCTCAATTCGGAATT
TTTGAAGAACTGTTCGTATGCATAACGTATTTACGTATTTACATAGTTGA
CGTATGCTAAACATTCTGAGCTTTGGCAGGTTGATTGCAGGTCAAATTAC
TAGCCGACCTTAACCAAATCCTGGGGATACACTgagcagtgccgtaggaa
gcattttaatattggggggggggggccccgggggggggggggggaggggg
gggggggggaggggggggggggggaggggggggggggggagggggggggg
ggggaggggggggggggggaggggggggggggggagggggggggggggct
gaagtttagtgacgccgcgagggccaaccatggtttggcccgagggggga
aattttgaaaacttgagctctagattgcttgaaaatgcactcaaaacatc
cccttataagacaattatgacaaattaaaaaagaaaaactttgctttttg
caaaatagccatttttgaaaaaattatttgggggggggggagctgaagtt
tagtgacgccgcgagggccaaccatggtttggcccgaggggggaaatttt
gaaaacttgagctctagattgcttgaaaatgcactcaaaacatcccctta
taagacaattatgacaaattaaaaaagaaaaactttgctttttgcaaaat
agccatttttgaaaaaatttttggggggcatagccccccttgcccccccc
ccagttgctacggcactgcactGAGTGAcctacacctttttttataagga
accttaacgaGCTCCGaactctgagcctggagttccttttTTCTCCAGAA
AAATTTAGCCTCAAAGCTCCTTATCGAGCTCCTTATTCacttagctgcta
agtttggactGATTTAATACAGACGTTTATTGAATGTTGTTTCatcaata
ttttgatgatattttgaactttttatttaGGTTTTTGTGAATGTGTGTAA
GTTCAAGTTTAACTCTTACtgttctcagcctgagcagtttcttaagttcc
ttataaaacgtgttccttttaaaaaatgtgtatactTATTTGCTAAATAC
TCATAAAGTTTAAATCTGCAGGGAACGTAGTTGCGGTCTAACCTACCTTT
CTTGCTACTTCGTCAGCAGGTCAGCTTACTTTTTTACTACAGCTCCGTAG
TAGTTTTTTGACAGTATTGAGTAATCTACAACTTGAGAAATGAAACGTCA
TCACACATTCTCTCATCATTCGTCACTGCCCAAATGAGATGTACAAGAAC
CTCTGCAAAGGTCAAACTGTTACAAGTTGTTAATAGAACTGTTGACAAAA
GTTTATAGATGTAATTTTAATGCtgctttttttacttttgtagTGAATTT
TTTCTATTCTGTGGTAATAGATTAGTAAGGCATATTGGATGTGAATTAAA
ACGTGTGTTGATTTACATAATTGattgacaaaacaaaaaaaagttttttt
gagtcATAAGAGATTTTGCGGCTTGGGTTTTCTTTATCTGAATTTGTGCT
ACTAAAGAGCTACAGTTAATGTATGTAGTATGAAAGAGACATAGAGttaa
aaaaatagagaaaaaacggtttttaaaaaccctttttttaatCTCTATAA
ATATAAGAGTGGCTTATTACTGTGATATTAGAAAAAAAGAGTGCCCTGGA
CTTGCGTTTTTGTTGTGATAAGCTATAAAGAGTTAGAGTCAGAGAAAATT
TGTCAATGAAGCAGTGACTTGTATGGGCTTAGATTGAATAATTTATAGAG
AATCAAGTGTTTTTTTGGTTTGGTGCCATGGATGTTCGACAATCTCGTTC
AAGACCATATTATTCAAGTTATCAGTAAGTTATTGTAGGGTCAGCTATAC
ACGCTCATGCAATGTTTATATTTTGTCCCCAGAAATTGGGGTCTGTCATT
CGTCAACATTTGATACGTTTTTTCTCCTTTTCAACTTTTAATTCTGGTGG
TTCTGCTACTAGTAAAACAGAGTAAGTTCTTTCGTTTACAGACTACCTGC
CACTGAGTTTAAAGTGCTTTTATCGCATTCAAATTTGCTCTGAATGCTTT
TCAGTCCATCTAAAATAAACGTATAATATTAATCAATACCGAGTTTGACC
CCTATAATAAAGccggatgagctggagtttttacaagctggGATGCGATT
TTCTTTGTGTGTATTTTACGGAACAAGCACACCCGATATGttatactttc
aaaaaattctctaaCCCCAAGttccgaagtcccgagttgaactgtgccaa
cactctccaaagtataagcctttgaaattttgaggatGGTGACGCCTATT
AGAAGGCGGTtctctgaaaaatctttttctttaagAATTCCTTTGATAAG
GGGGCCTGGAATTATTTTGGAGAaactgaaattatgacgtcacccgcaaa
ataactcggaaaaaataacttgggaaaaaataactcggaaattCCAGGCC
CCTTCGATAAGTTTCACTGCACTACGATATTCTAAGTGGCTGAGTCGGTT
TTGCTCCAAAAGGTTCTGGAAATGTAGTACAGTAGAGGAAATTTTCCGTT
CAAGGAGCTTAGGCATATTTTGTATCAGTAGCATCAATAAGTTCAACATA
GTTCGTTTCAATCGatcaaatcaaattcaaaagagGCTATTAATCTCAAT
ATTACCTACTATGCTTATATCTCTAAGTAGTGGGTAGCTCAAAGGAAGAG
CATTCAGCTACGGTGTGTTCGTGGGCTCAATTTATCGACGGGTCGCAAAC
TAACTATATCTCTTTTTCCCTCCAGGAGAAGCCAAACGGAGAGCATGGCG
TCATCCAGCATGGCATCCAGTATCCCAGAAAGCACGAGTAGTGTTGACAG
TAGTTCCGACAATGAAGAAATGAGAATCACGCAAGAACAAAGAGAATATT
ACACCAACCAATTCAAAAGTTTACAACCCAATGAAGACGATGTTATCAAA
GGTAACGATTATCgcaggaaaaaatctttaaatcacACTCGTGTGAAAAC
TGATTTCCAAGGGTGAGATTCGGTTCGTTTTCACACTATTTGTTTACACC
TTGTTGAATCAATTATCAAACTAAAAACTCAATCTGGAATCACAATCTGA
CTTAATTCTTCTTAAATTTGAGGTGTTTTAATCTAATACTTAAATCATCA
TGGTGTAAACACTAAGGGTGCTATTTACGATTTCACACCCGTGTGAAAAC
GAACCGAATCTCACCCTGTGAAATAAGTTTTCACACGAGTGTGATTTAac
gattttttcctgtgtattaTGATAGTTAATGTTTTTGTCCGAAAAGTTAT
ACGCCCTTATTTTTCGACCTCGTCCTTCCACAGCCTCAAAGCGTTTAAAT
AATGATGAAGTTTTGTTAATAATGATGATTCTAGCTCATTAAACTATAAC
TGATTCTGTTTCAACTACagtgaagtttttttttaactcgctggaacctc
tataactcgataGTTTCCTTAAAACGAACAAGTTTGTCTTGGAGACTTCC
AATGTATTTGTTTCATATCAAGTTGTATAActcattgaatttttttgtct
aGGTCCCCAAGCTCGTGATTTCTTCTTGAAGTCGAATCTAGCGATGGAAA
CTCTTTCTAAGATCTGGTATGTATGTTTCCCTTGTAGTAATTATCTGTCA
ATTATAATATATTACCCCCTCTATACATGTAAGGTCTTCATTCGATTGAT
CTTAAACAAGCTCATTACAGCTCGCTTTGGTGCTTTCAATTAGAtttgaa
ctttttcttttcGACGAGATTTGTCAATACAGTGGAAATTTGATTATTGA
AACTTGCATATATTTCTCTTTCTCAACAACCCTTAggaatttattttatt
aatcAAAGTTTTATTCAACCTCGTCCCTGTGTAAaacaggctttatttac
gttagtgattgacgccagagaatatcctggtgttggctgatgcgagacTA
TCATCTCAAAGTGAGAACTTctcaaacaacaaaaaagtgaCGCATTCGAA
AAGCAGACAATGCCAGGGTACTATCTGGGGTTATCAGTAATAAGCATAAA
TAAcagataatacgcagggaatgAGGTTGTGTTTTATTGACAAATTGTTC
ACAAATAATCGAATAACctctttaaattaaaaatttcaggCATCTATCAG
ACTTGGATAAAGATGGCGCATTGAACTTGGAGGAGTTTCAGATTGCAATG
CATCTGGTTGTGTTAATTAAACATGGTTACGAGTTACCGATGGTTTTACC
TCCTTCCCTTCTTGGTCAAGAGCAAGGTACGTTGTTAGTCTGCCGTCAAA
ACATGCCTGGTTATTTTAAAATATCATAATTTGACTTTATCTTTAGATAG
TTGATGATTAGCTTAAGGTTTATTTCCATCTCAAACCATTCTAAGGTTGT
TGTTTTTTAGTGGTCGCTAACTGGATttctatataatatatattcatgat
atgcaccactgcaatgtcttctgacattacgtcatggaaccaatagctca
ttggttggaagtgacgtaaaagcagtcaatacgtcactctCAACCAATCA
gttattgggtggaacggaagacattgcaatggcgcatatcatgaatagaa
taTTATTTTTATCTCAAATGTCTCCTAATTGGAACAAGTTAACAATACGT
TAtaatatataaaggtcagtggttataccttgactcgaacaaatttgtgt
tcgcTGCGaagggttcgagttatggatacTCCtctgtaaaatgttttttt
ttaccaccgggaATCTAGTATTGTATCCGAATCCATATAATCCGAAAACA
GGTGACTTTTTATGTTTCTGTATGACTTTTAAAACTTGTCCTTTCATTAT
GTCAGTCCATCAAATGGCAAGTCAAGATGGTGTGGATATGAGCGATGAAG
ATGAGAAATTGATTTCTGATGACGAAAAACAAGAATCTGGTGATGTACGT
AACGCTCTTTACGTCTTGCTATTTACATATTATGGAACACGATAGAGTTT
CAATAGTATTCCAAGATAATTAAGATAATATTATCCCGAATAGTTACTCC
TTCTCGGTTTATAATCCGCTAAAAGTGGTGAATTTTGACAACTCAGAGAA
ATTGAAAGGTTTTCCTTCACTCCGCTTTTACCATGGGATTAAAAACTGTA
GACGTACAGAGGAGACAAAAACGTTCTGACGATTCGCGGATAGGATATAG
CGCTAGAAGTGTTGTATAGGGTATCTTATAAAACTGTTTCTCCTTTATTT
CTAGTGGTCCGCTGAATTTGATGCTACGGATGGGGTGAGTTGATTTATGG
TTTAGGTCTGGCTGTACTTATAGTGCAGTGACCATtatataattatattt
tataGATATTTAAATGAGATTTATCATGTGCTATAGCTCGCTGTTTCAAA
ATACTACAAATTTCGATTTGGTTATTCCTTACCACATTCCTTCTCCACAT
CATTCCATATGATATGTAGGTGATTTTCTGTACTgctattttcaaaagat
aacCTCAATCTTTCAGTTTATGGGAACCTTTACTTGAACACTCCTACTTT
TTCACTGCAGGCACCAATTGATCGTGGTGAACGTATAGTGCAAACTTACG
CGCAACCCTCCCCTACGTCCGTCACCGTGCCGTCAGAAACTCGCGTACAA
CCCGTCTCGCACATGATCGAACAACAACAGATCAACCATGACGACGAAAA
CGAATTACCTTCCTCGCCTGGTGCCTTGGCTTCTCCTAACGATGTCGCCG
CGGCGGGTGGCAAAATGACAGCTATCGCACGACCCCGTGTAACCGCTAAT
AAAAACGTTAATCTGATGGATGCGTCACCATGGCAGCTCCTGCCACCACC
GTCCGGGAAAACTGGCAAATTCGGTGGCCCGAATGGTGGTACAACCGCGA
AGAAAGCCTTGAAAATGGATAGTGTTGATAGTGAATTAGACTCGGCGGGT
GTCATCAGTGATAGCGAAAATAATAAACTGGTCTCGATTGATAATCACAT
GTCCCAAACGACGTCGCCGACAAATGGCGACAGTAGTCTGGATAACCTCG
ACGACGACGAACATTTGACGGACGACCACGATCACGAACGTTTGAAAGTC
AAGAAAAAGGATTCGGCATATTTCAGGAATTTGTCAAAAGAGAAATCGCG
TTCGATTGATAGCTTACGGTCAGATATTTCGGAGAGTAGCATGTTTGAAT
GGAAGAGACAATCCATTAGACGAGAATCGAGACCAAGGTATGACTCGTTT
TCCCAAAGTTGAAACAACTGAATTATAGTGAGATTATTCTCACTGATTCT
GATTTCGAtacattttgttattttttatatttattttaagGAAAACGTCT
TCTTTGTATTATTCCAATTGCAAAATCAATCGTTGAAGAACAAGAGTTAT
TCGGTAGGTAAACTTTCTCGTAATACTTTTTCCTTATTAGGTCATTTACA
GGGGAAAGCACACACGACACACCGCAATTCGAATCACCGCCCGTCCCACC
GCCACGAACGAATAAAGGACACGCCAGGGCGTCATCACTCGATTTTAATC
AAATGTTCCATAATCGTTCACCTAGAGTCAGTTCTGGTGAGTGCTAATTG
CATTTTCGCGGTTCATTtctctgttgttttttttacgAGGAAAGTaagag
aaaaattgaaacacTTATCAACCTTTAAAGCATTAGAACACTGGGTTCGA
GTCTACTAAGATTAATACAGTTACATTCTCAAAGACAACGAATTCTGACc
taatttttcttgtaaatttcTTTACCAGTCCCTTCGAAAACAACCGTGCT
TTTATGGGTTGATTGACGTCAAACATTTGAAATGctaagaaaagtgaaaa
agaattgatatttttttagtcACTCGAGCATTAGATATCTGCGAGATAAT
TGTGCCTGAGTGGTTGTAATCTTTTAGTATTATGACATACATCAATAATA
AGTAACTGACTTTCAAATCGTTTAACGCACGTTGAATTTTCTCTTTTAGA
ACCGAAATTACAAGTAACGACACCAACTGACGGAACAGGCAAGAATCCGG
TAAGCCCTTTGAATTCTACATTCAATACTACATACACATTATGCTTAATT
TTTGCATTATAACTTCACGTAATTTAACGCAGTAACTTcactctattcat
gatatttatgacgtaatgttttcgacggaaacaccccggtttttgccagt
agtggcaaattggAGCTAtagaaaaattgctcaaaatttgcCACAACTGG
CAAAAATGGAGgtttttccgtagaaaacattacgtcatgaatatcaagaa
ttctCACTATATAATATGCATGTGATTAACATCAATTTTCAGCCACAAAA
ACCACCACGCTCAAATCCACCAAGCACTTCTTCAACTAATAACTCGTCTG
CCGCCCCCACTGCTGCAGCCCGCCCTCGTTCGTCCAAGGGTGATGAATAT
CATAGGTCACGATCACTTGATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000722XLOC_000722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001338-exon-sc0000010-1491911889:229400..229464TCONS_00001338-exon-sc0000010-1491911889:229400..229464Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:229400..229464TCONS_00001338-exon-sc0000010-1510915933:229400..229464Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:229400..229464TCONS_00001338-exon-sc0000010-1575043694:229400..229464Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:229949..230257TCONS_00001338-exon-sc0000010-1491911889:229949..230257Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:229949..230257TCONS_00001338-exon-sc0000010-1510915933:229949..230257Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:229949..230257TCONS_00001338-exon-sc0000010-1575043694:229949..230257Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:233925..234100TCONS_00001338-exon-sc0000010-1491911889:233925..234100Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:233925..234100TCONS_00001338-exon-sc0000010-1510915933:233925..234100Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:233925..234100TCONS_00001338-exon-sc0000010-1575043694:233925..234100Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:234702..234765TCONS_00001338-exon-sc0000010-1491911889:234702..234765Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:234702..234765TCONS_00001338-exon-sc0000010-1510915933:234702..234765Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:234702..234765TCONS_00001338-exon-sc0000010-1575043694:234702..234765Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:235289..235425TCONS_00001338-exon-sc0000010-1491911889:235289..235425Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:235289..235425TCONS_00001338-exon-sc0000010-1510915933:235289..235425Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:235289..235425TCONS_00001338-exon-sc0000010-1575043694:235289..235425Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:236005..236093TCONS_00001338-exon-sc0000010-1491911889:236005..236093Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:236005..236093TCONS_00001338-exon-sc0000010-1510915933:236005..236093Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:236005..236093TCONS_00001338-exon-sc0000010-1575043694:236005..236093Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:236404..236433TCONS_00001338-exon-sc0000010-1491911889:236404..236433Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:236404..236433TCONS_00001338-exon-sc0000010-1510915933:236404..236433Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:236404..236433TCONS_00001338-exon-sc0000010-1575043694:236404..236433Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:236710..237386TCONS_00001338-exon-sc0000010-1491911889:236710..237386Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:236710..237386TCONS_00001338-exon-sc0000010-1510915933:236710..237386Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:236710..237386TCONS_00001338-exon-sc0000010-1575043694:236710..237386Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:237590..237735TCONS_00001338-exon-sc0000010-1491911889:237590..237735Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:237590..237735TCONS_00001338-exon-sc0000010-1510915933:237590..237735Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:237590..237735TCONS_00001338-exon-sc0000010-1575043694:237590..237735Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:238149..238198TCONS_00001338-exon-sc0000010-1491911889:238149..238198Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:238149..238198TCONS_00001338-exon-sc0000010-1510915933:238149..238198Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:238149..238198TCONS_00001338-exon-sc0000010-1575043694:238149..238198Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1491911889:238492..238625TCONS_00001338-exon-sc0000010-1491911889:238492..238625Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1510915933:238492..238625TCONS_00001338-exon-sc0000010-1510915933:238492..238625Clytia hemisphaericaexon
TCONS_00001338-exon-sc0000010-1575043694:238492..238625TCONS_00001338-exon-sc0000010-1575043694:238492..238625Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:229400..238625 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.8271	1.58152	0.499294	0.833548	3.19959	3.31519	4.74482	4.31408	2.76969	3.76898	1.71763	1.13366	5.01155	5.3771	1.97269	2.38881	4.36982	4.59049	5.19751	5.71128	2.27577	3.73271	1.09735	2.56085	3.17212	3.75221	1.35993	1.95934	2.50448	2.17492
Blast
[Close]
BLAST of TCONS_00001338 vs. Swiss-Prot (Human)
Match: REPS2 (RalBP1-associated Eps domain-containing protein 2 OS=Homo sapiens GN=REPS2 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.059e-25
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1 
Query:  460 NEEMRITQEQREYYTNQFKSLQPNEDDVIKGPQARDFFLKSNLAMETLSKIWHLSDLDKDGALNLEEFQIAMHLVVLIKHGYELPMVLPPSL 735
            +E  RIT+EQREYY NQF+SLQP+    I G  A++FF KS L++  LS IW LSD D DGAL L EF  A HL+V  K+GY LP  LPP+L
Sbjct:  273 DEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARKNGYPLPEGLPPTL 364
The following BLAST results are available for this feature:
BLAST of TCONS_00001338 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
REPS22.059e-2557.61RalBP1-associated Eps domain-containing protein 2 ... [more]
back to top