TCONS_00001337 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001337
Unique NameTCONS_00001337
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2888

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001337 ID=TCONS_00001337|Name=TCONS_00001337|organism=Clytia hemisphaerica|type=transcript|length=2888bp
AAAGACAATAAGTATACAAAAAGGAAGACAAATAAAGATGATCTAGGAAG
ATCAATATTTGAGTGGAAGATTTTTAATGTACAAAAATTCTAAGaagtga
atcaatcaatcaaacatGGATTTTGATCCGTTGAGTGACAATGAAGATGA
TGTGACATTTATgccagagaaaaagaaaaaagataaagaagAAAAACGAC
GAAAAAGTAAAGGCTCCCATAAATCTGACAAGAGAGATAAGGGAAGCTTC
AGTGATGGGTCAACACCAACAGCCATGAAAAGTAAGAATGTCGTGCATGG
TCTTGTGGGTCCTGCAGAATACATTGCTGAAAACAGTCCTACACATGGAG
AATCGTCGACAGCGTTTGGCAACCAACCTACTTCTCCAACTACAAATATC
TCTGCAGCTCAAGTCTTTTCACAACAGCAAGTGACACCGCAAAAGATTCA
ACAAACATCACAGGTCCTTCAACAACAAACTCCCCAACAGATGCAGCAGC
AATGGACGCCACAAAAACATCAACAAGCAAACAATCAACAGTTTGCCCAA
CAGTCCAATTCAACGCCCAACTTCCAACAGCTTCAATATCAAAACACACC
GACAAGTGGACAACCTTTCACAGCTAATTTCAATGCATCCTCGACGAAAA
TTGAGCGACCACATTCTTCGGCTGCACTACTCCAAGAGCGAACGCCTCAA
CAATCACCACAGCCTTTCAAACAATCAACGACTATGACCCAACAAAAAGG
CACTCTGCTTGCTCAAGCAATGAATACAACCCCTCAGCCTCAGCCTTCAC
CACTACCAAATAAACAAGCTCCTGCAGCCAGTATCCAACCACTTCCACCG
AACCCGTCCCAACTGACCGCAGCCATTAATATGACACATCACCGAAACTC
ATCTTATTCAAGAGCTATGTCATTACCGGTGGAGTCAGCAACTGGGAAAC
AGGATGCAAGCTCGGATCACATGATCAATAGATTCCATACAAAATTTGAC
AGTGAGCTTGAAGTCTCCACAAATGTTGTTGGATCACCAATCCTTGAGAA
TCCAGCCTCACCATTCCAGAGATCAGAATTGTGGAACAATGCACCGCCCT
TACACCACGCCCATCATCATACCCACCACTCTCATGAAGCACCACACACG
CCCAAGCAACATGACGGTGATTGGGCGCATTTTTCACCTCAAACAGAAGA
TGTACCTACATCGAGTCATCCCAATGCTGGTGTAATCTCGTCTTCNACGG
TGATTGGGCGCATTTTTCACCTCAAACAGAAGATGTACCTACATCGAGTC
ATCCCAATACTGGTGTAATCTCGTCTTCGGTTGAGTCGGACAATCAATTG
CCACCGCCATCGAATCATATCGATATACCAAGAAAGAGAAGCCAAACGGA
GAGCATGGCGTCATCCAGCATGGCATCCAGTATCCCAGAAAGCACGAGTA
GTGTTGACAGTAGTTCCGACAATGAAGAAATGAGAATCACGCAAGAACAA
AGAGAATATTACACCAACCAATTCAAAAGTTTACAACCCAATGAAGACGA
TGTTATCAAAGGTCCCCAAGCTCGTGATTTCTTCTTGAAGTCGAATCTAG
CGATGGAAACTCTTTCTAAGATCTGgCATCTATCAGACTTGGATAAAGAT
GGCGCATTGAACTTGGAGGAGTTTCAGATTGCAATGCATCTGGTTGTGTT
AATTAAACATGGTTACGAGTTACCGATGGTTTTACCTCCTTCCCTTCTTG
GTCAAGAGCAAGTCCATCAAATGGCAAGTCAAGATGGTGTGGATATGAGC
GATGAAGATGAGAAATTGATTTCTGATGACGAAAAACAAGAATCTGGTGA
TTGGTCCGCTGAATTTGATGCTACGGATGGGGCACCAATTGATCGTGGTG
AACGTATAGTGCAAACTTACGCGCAACCCTCCCCTACGTCCGTCACCGTG
CCGTCAGAAACTCGCGTACAACCCGTCTCGCACATGATCGAACAACAACA
GATCAACCATGACGACGAAAACGAATTACCTTCCTCGCCTGGTGCCTTGG
CTTCTCCTAACGATGTCGCCGCGGCGGGTGGCAAAATGACAGCTATCGCA
CGACCCCGTGTAACCGCTAATAAAAACGTTAATCTGATGGATGCGTCACC
ATGGCAGCTCCTGCCACCACCGTCCGGGAAAACTGGCAAATTCGGTGGCC
CGAATGGTGGTACAACCGCGAAGAAAGCCTTGAAAATGGATAGTGTTGAT
AGTGAATTAGACTCGGCGGGTGTCATCAGTGATAGCGAAAATAATAAACT
GGTCTCGATTGATAATCACATGTCCCAAACGACGTCGCCGACAAATGGCG
ACAGTAGTCTGGATAACCTCGACGACGACGAACATTTGACGGACGACCAC
GATCACGAACGTTTGAAAGTCAAGAAAAAGGATTCGGCATATTTCAGGAA
TTTGTCAAAAGAGAAATCGCGTTCGATTGATAGCTTACGGTCAGATATTT
CGGAGAGTAGCATGTTTGAATGGAAGAGACAATCCATTAGACGAGAATCG
AGACCAAGGTCATTTACAGGGGAAAGCACACACGACACACCGCAATTCGA
ATCACCGCCCGTCCCACCGCCACGAACGAATAAAGGACACGCCAGGGCGT
CATCACTCGATTTTAATCAAATGTTCCATAATCGTTCACCTAGAGTCAGT
TCTGAACCGAAATTACAAGTAACGACACCAACTGACGGAACAGGCAAGAA
TCCGCCACAAAAACCACCACGCTCAAATCCACCAAGCACTTCTTCAACTA
ATAACTCGTCTGCCGCCCCCACTGCTGCAGCCCGCCCTCGTTCGTCCAAG
GGTGATGAATATCATAGGTCACGATCACTTGATGTAAG
Run BLAST on NCBI

transcript from alignment at sc0000010:226394..238625+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001337 ID=TCONS_00001337|Name=TCONS_00001337|organism=Clytia hemisphaerica|type=transcript|length=12232bp|location=Sequence derived from alignment at sc0000010:226394..238625+ (Clytia hemisphaerica)
AAAGACAATAAGTATACAAAAAGGAAGACAAATAAAGATGATCTAGGAAG
ATCAATATTTGAGTGGAAGATTTTTAATGTACAAAAATTCTAAGaagtga
atcaatcaatcaaacatGGATTTTGATCCGTTGAGTGACAATGAAGATGA
TGTGACATTTATgccagagaaaaagaaaaaagataaagaagGTATCGTTC
AAATTCTACTTCctgaacaataaaaaaactattCAGCAGCAACCTTCTCT
CTCTCAACTCCCTCTAGCTTGTGTTGTCTGACAACCAATTACGTGGGAAA
AAATAGTTTATAGTAAATAACTTGTAGTTAATTAAAAATGCTTGTTTTTC
TATTGTGTTTTATCTATTAGCAGCTTTTTAATCCATCTCTACTCATCAAT
ATTTTATACTTTCCTTGTCCTTACAAACTCAACACTGTTTTTAACTGGCT
TGAATGGTTAACCATCTAGTTTGCTCATTTATTTCTTACAATATCGAAtt
aattaacatattttattaGCCTTCCAGATAAGTGCGAttgatatcttttt
attgattgTGAGTTGCTATTATATTAGCGCTGCATTTTGGTTTGTAGAAA
AACGACGAAAAAGTAAAGGCTCCCATAAATCTGACAAGAGAGATAAGGGA
AGCTTCAGTGATGGGTCAACACCAACAGCCATGAAAAGTAAGAATGTCGT
GCATGGTCTTGTGGGTCCTGCAGAATACATTGCTGAAAACAGTCCTACAC
ATGGAGAATCGTCGACAGCGTTTGGCAACCAACCTACTTCTCCAACTACA
AATATCTCTGCAGCTCAAGTCTTTTCACAACAGCAAGTGACACCGCAAAA
GATTCAACAAACATCACAGGTCCTTCAACAACAAACTCCCCAACAGATGC
AGCAGCAATGGACGCCACAAAAACATCAACAAGCAAACAATCAACAGTTT
GCCCAACAGTCCAATTCAACGCCCAACTTCCAACAGCTTCAATATCAAAA
CACACCGACAAGTGGACAACCTTTCACAGCTAATTTCAATGCATCCTCGA
CGAAAATTGAGCGACCACATTCTTCGGCTGCACTACTCCAAGAGCGAACG
CCTCAACAATCACCACAGCCTTTCAAACAATCAACGACTATGACCCAACA
AAAAGGCACTCTGCTTGCTCAAGCAATGAATACAACCCCTCAGCCTCAGG
TATCATATAAAGTAATTAGTATGAAGCTCTATTCTACCAACGCAGTGTTC
GTTCGCTaataaatttttagattttcttaaCCTGTTAATAAGCGTGAAAT
GGTTGTATTAATTTTCTAAAAGATCTTAGTAATCTTACAACAATAGAATC
TGTGTGTGATACTGCTGGCTTTTCAATTTAAATCATCAAATCtgtaaaat
gtgttttttttattcttactATATATaacatttaaaacttttttctcaGC
CTTCACCACTACCAAATAAACAAGCTCCTGCAGCCAGTATCCAACCACTT
CCACCGAACCCGTCCCAACTGACCGCAGCCATTAATATGACACATCACCG
AAACTCATCTTATTCAAGAGCTATGTCATTACCGGTGGAGTCAGCAACTG
GGAAACAGGATGCAAGCTCGGATCACATGATCAATAGATTCCATACAAAA
TTTGACAGTGAGCTTGAAGTCTCCACAAATGTTGTTGGATCACCAATCCT
TGAGAATCCAGCCTCACCATTCCAGAGATCAGGtataaatgtttttaatt
ttcgagCAGCAAATTACAAACACTGCACTATTAAttctaaaggttttatt
ttcttCCCATTTTTTAATGATAAGTGAAGGTGTCAAAATATTATTTCGaa
tctttattttttccttAAGTAACTACTCATCCCCACTTTATTAGCACTCT
TTATGTTGCAAATCGTAAATTTAATAATTGCAATAATTAATTACTACACT
TCCACTTGCAACTAATAAGAAGTAATTAGTTATTTATTTTACCATTCTCA
CATTTTTTAGACTCACTCTCTTCACCTCCACTAACACCCAATAACAAACA
CTCAGCTTCACAACAAGGTACGGACATGCACACCATTCATTCACTACCCC
TTCTATTATAATATTACTGTTATTAAAAAATCTGTAGACAATCTTTTAGT
ATAACTTCTTTTGTTATCTCTAAATATCTCGAATGATATCTTACGCCTTC
TTCTTACAGACCCTGTGGGACCATaacaatttttccagttggaGGGGGGA
CTGGAAAAATTgcccaaaatattgtccccagtgTAAAATAAAACTCCAAT
TTTTGAATCGCTGaatgaaatttcttgaaaacaatTTAATTCAAATCTCC
GGCCATAAAAAAACATAGGAATGTCAATCGCCATCGATATTCAGTTCGTT
ATTTTTTACTcaactggctgaaaaatcctatcgggtctgtgagaagtagG
TTTTATCTGATTTGAAATAGCTTTTAATTAATAAACTATTTAGAGCAACT
CAACCCTTGACCGATAATCCCATATGGTAAACCTAGCTTAAACCAAAAGA
ATTTTATACCTTTTTTTAAAAGCTGGTTCAGTTGACCCCTTTATCCTCCA
GACATTCTGattgaacttttgaaatctctagagagataaaaaacaaattt
caagaaACCAAATGCTTTTCATCCTCTGTCAGTACGTATCTCTCTCTAAT
CACATCCTTTGAGACGAGTCGGTGATTTTAACTGTGTNTGTCAGTACGTA
TCTCTCTCTAATCACATCCTTTGAGATGAGTCGGTGATTTTAACTGTGTC
CTTGATAAAACATGACATTTCTATTGACATTGCGAATCTTATTTATTTAC
ATTgaccacaaaataaaaaacaaattgaacGTAAAAACTTGATTAATGAA
ATGAGTTTATGATTTATGGGAGTAGAAACGTTCATTTGGAGTATCGGACT
AACTTTTTGAGGCTTTCATAGTCTCTGTTTCATGCTCGTGAAATGTTGAA
ATTTGTTAAACTTCGAAGCAAAGTTTATCATGTGaatctttcaaaaagtt
tttcatcaGGGAGCGAAGAaggtctgtttttttttatgttaaaaattctt
ttgaggTTTTCAACAGTTTGTTTGTTCCCTCTTATTACACAACTTATAGG
GTCCATAATGTAATATAGCCAAAGGGGACCCCCAGGGGACCCCTTTTAAA
caataagaaaaataacaaaatgggTATAGTTAATGTCGGATGTTTGTTTA
TGTACAAGTGTATGTGGTGtcactttttcacaaaaaaatctgACTATATT
TTTATATGTTTGCGTGTGTTTGCAGATGCTGTAATAAAGGGGAACAACAT
TGTGTTGAACTATTGGTCACAAGGTTTTTAAAAAGGAAGTGacaattgat
tttttaaagttttttggatTCAGTAAAATTGTTACAAAAAAGCTAACAAC
TTCCAATTATCCAAAGCTAATCGCTGTTCGCTGTTCGACTAAATACCAAG
CAGCTTTTTATTTGAGTCATGGCTTTAAATTGCTTGGTCAATTTTAACGA
TTTAGAATTGTGGAACAATGCACCGCCCTTACACCACGCCCATCATCATA
CCCACCACTCTCATGAAGCACCACACACGCCCAAGCAACATGACGGTGAT
TGGGCGCATTTTTCACCTCAAACAGAAGATGTACCTACATCGAGTCATCC
CAATGCTGGTGTAATCTCGTCTTCNACGGTGATTGGGCGCATTTTTCACC
TCAAACAGAAGATGTACCTACATCGAGTCATCCCAATACTGGTGTAATCT
CGTCTTCGGTTGAGTCGGACAATCAATTGCCACCGCCATCGAATCATATC
GATATACCAAGAAAGTAAGaacgtttttctaatatttctaTTCTAATGAC
AGCATATTTAGGGTTTGAAAATTGAAGGTTGATAATTACACTTGTAATTA
TACATGGATattaccattgagtttaaagccgcTAAAGGGGCTTAATGCTG
ATTAAGCTACTTATTCTCCAAAACTAATTTTACCAGTACGAAAATTATAT
TGTCGACTTCTAATGGACAGAAAGATTTAATAACGGATAGCCCATGCCAT
AGCAAACAAGCTTCGTTAGATGTTCGCACTTGGAAACTCTATTTGAATTA
TTGATAGCTTTGTAATTTGATTATCGTTGAGCTGCTGtgcagaaaatgca
aaaaaaattatcttatagaaaactttttaaaagtctTAAAAATATAACGA
GAAAACATGTTAAATTTATTAGAACTTAGATGTTAAAATCTTTAACATCA
AATATTGTTCACGTTTTGTTAGTAAACAGTTCTTTAATAGGGAAGCTAAA
AATCTTTGAATGAAGTTGTGGTACGAGTGTGTACGAgtacttgaaaattt
taaacttcCTCCACCAGTTAAAAAGGAGATTGTATGAATTTTGAACGTCT
GTGACCAAACTTTACGAGTATTTATTATTCCCTTCCTGCTTAATACCCTC
TACGCAAggagggggtcaagcagtttgTACACGACTCCCATGAAGCTTAG
AACGGTGGTGGTTCACTTTCAAAAGTGACAAAATGAAAATCTGACCTCGA
AAGCAGTTAATAGATTGTGTACTTAGTGAAAGGTAGTGGTTGTCCTTTTC
AAAATCAGTTAGTAGACAAAGTGTTCCGGAgtaactgcttgaactcctct
GTTTACGCCTTCACTTTACCCTAAAGCCAGCAAGTTAGTATTCTCAATTC
GGAATTTTTGAAGAACTGTTCGTATGCATAACGTATTTACGTATTTACAT
AGTTGACGTATGCTAAACATTCTGAGCTTTGGCAGGTTGATTGCAGGTCA
AATTACTAGCCGACCTTAACCAAATCCTGGGGATACACTgagcagtgccg
taggaagcattttaatattggggggggggggccccggggggggggggggg
aggggggggggggggaggggggggggggggaggggggggggggggagggg
ggggggggggaggggggggggggggaggggggggggggggaggggggggg
ggggctgaagtttagtgacgccgcgagggccaaccatggtttggcccgag
gggggaaattttgaaaacttgagctctagattgcttgaaaatgcactcaa
aacatccccttataagacaattatgacaaattaaaaaagaaaaactttgc
tttttgcaaaatagccatttttgaaaaaattatttgggggggggggagct
gaagtttagtgacgccgcgagggccaaccatggtttggcccgagggggga
aattttgaaaacttgagctctagattgcttgaaaatgcactcaaaacatc
cccttataagacaattatgacaaattaaaaaagaaaaactttgctttttg
caaaatagccatttttgaaaaaatttttggggggcatagccccccttgcc
ccccccccagttgctacggcactgcactGAGTGAcctacaccttttttta
taaggaaccttaacgaGCTCCGaactctgagcctggagttccttttTTCT
CCAGAAAAATTTAGCCTCAAAGCTCCTTATCGAGCTCCTTATTCacttag
ctgctaagtttggactGATTTAATACAGACGTTTATTGAATGTTGTTTCa
tcaatattttgatgatattttgaactttttatttaGGTTTTTGTGAATGT
GTGTAAGTTCAAGTTTAACTCTTACtgttctcagcctgagcagtttctta
agttccttataaaacgtgttccttttaaaaaatgtgtatactTATTTGCT
AAATACTCATAAAGTTTAAATCTGCAGGGAACGTAGTTGCGGTCTAACCT
ACCTTTCTTGCTACTTCGTCAGCAGGTCAGCTTACTTTTTTACTACAGCT
CCGTAGTAGTTTTTTGACAGTATTGAGTAATCTACAACTTGAGAAATGAA
ACGTCATCACACATTCTCTCATCATTCGTCACTGCCCAAATGAGATGTAC
AAGAACCTCTGCAAAGGTCAAACTGTTACAAGTTGTTAATAGAACTGTTG
ACAAAAGTTTATAGATGTAATTTTAATGCtgctttttttacttttgtagT
GAATTTTTTCTATTCTGTGGTAATAGATTAGTAAGGCATATTGGATGTGA
ATTAAAACGTGTGTTGATTTACATAATTGattgacaaaacaaaaaaaagt
ttttttgagtcATAAGAGATTTTGCGGCTTGGGTTTTCTTTATCTGAATT
TGTGCTACTAAAGAGCTACAGTTAATGTATGTAGTATGAAAGAGACATAG
AGttaaaaaaatagagaaaaaacggtttttaaaaaccctttttttaatCT
CTATAAATATAAGAGTGGCTTATTACTGTGATATTAGAAAAAAAGAGTGC
CCTGGACTTGCGTTTTTGTTGTGATAAGCTATAAAGAGTTAGAGTCAGAG
AAAATTTGTCAATGAAGCAGTGACTTGTATGGGCTTAGATTGAATAATTT
ATAGAGAATCAAGTGTTTTTTTGGTTTGGTGCCATGGATGTTCGACAATC
TCGTTCAAGACCATATTATTCAAGTTATCAGTAAGTTATTGTAGGGTCAG
CTATACACGCTCATGCAATGTTTATATTTTGTCCCCAGAAATTGGGGTCT
GTCATTCGTCAACATTTGATACGTTTTTTCTCCTTTTCAACTTTTAATTC
TGGTGGTTCTGCTACTAGTAAAACAGAGTAAGTTCTTTCGTTTACAGACT
ACCTGCCACTGAGTTTAAAGTGCTTTTATCGCATTCAAATTTGCTCTGAA
TGCTTTTCAGTCCATCTAAAATAAACGTATAATATTAATCAATACCGAGT
TTGACCCCTATAATAAAGccggatgagctggagtttttacaagctggGAT
GCGATTTTCTTTGTGTGTATTTTACGGAACAAGCACACCCGATATGttat
actttcaaaaaattctctaaCCCCAAGttccgaagtcccgagttgaactg
tgccaacactctccaaagtataagcctttgaaattttgaggatGGTGACG
CCTATTAGAAGGCGGTtctctgaaaaatctttttctttaagAATTCCTTT
GATAAGGGGGCCTGGAATTATTTTGGAGAaactgaaattatgacgtcacc
cgcaaaataactcggaaaaaataacttgggaaaaaataactcggaaattC
CAGGCCCCTTCGATAAGTTTCACTGCACTACGATATTCTAAGTGGCTGAG
TCGGTTTTGCTCCAAAAGGTTCTGGAAATGTAGTACAGTAGAGGAAATTT
TCCGTTCAAGGAGCTTAGGCATATTTTGTATCAGTAGCATCAATAAGTTC
AACATAGTTCGTTTCAATCGatcaaatcaaattcaaaagagGCTATTAAT
CTCAATATTACCTACTATGCTTATATCTCTAAGTAGTGGGTAGCTCAAAG
GAAGAGCATTCAGCTACGGTGTGTTCGTGGGCTCAATTTATCGACGGGTC
GCAAACTAACTATATCTCTTTTTCCCTCCAGGAGAAGCCAAACGGAGAGC
ATGGCGTCATCCAGCATGGCATCCAGTATCCCAGAAAGCACGAGTAGTGT
TGACAGTAGTTCCGACAATGAAGAAATGAGAATCACGCAAGAACAAAGAG
AATATTACACCAACCAATTCAAAAGTTTACAACCCAATGAAGACGATGTT
ATCAAAGGTAACGATTATCgcaggaaaaaatctttaaatcacACTCGTGT
GAAAACTGATTTCCAAGGGTGAGATTCGGTTCGTTTTCACACTATTTGTT
TACACCTTGTTGAATCAATTATCAAACTAAAAACTCAATCTGGAATCACA
ATCTGACTTAATTCTTCTTAAATTTGAGGTGTTTTAATCTAATACTTAAA
TCATCATGGTGTAAACACTAAGGGTGCTATTTACGATTTCACACCCGTGT
GAAAACGAACCGAATCTCACCCTGTGAAATAAGTTTTCACACGAGTGTGA
TTTAacgattttttcctgtgtattaTGATAGTTAATGTTTTTGTCCGAAA
AGTTATACGCCCTTATTTTTCGACCTCGTCCTTCCACAGCCTCAAAGCGT
TTAAATAATGATGAAGTTTTGTTAATAATGATGATTCTAGCTCATTAAAC
TATAACTGATTCTGTTTCAACTACagtgaagtttttttttaactcgctgg
aacctctataactcgataGTTTCCTTAAAACGAACAAGTTTGTCTTGGAG
ACTTCCAATGTATTTGTTTCATATCAAGTTGTATAActcattgaattttt
ttgtctaGGTCCCCAAGCTCGTGATTTCTTCTTGAAGTCGAATCTAGCGA
TGGAAACTCTTTCTAAGATCTGGTATGTATGTTTCCCTTGTAGTAATTAT
CTGTCAATTATAATATATTACCCCCTCTATACATGTAAGGTCTTCATTCG
ATTGATCTTAAACAAGCTCATTACAGCTCGCTTTGGTGCTTTCAATTAGA
tttgaactttttcttttcGACGAGATTTGTCAATACAGTGGAAATTTGAT
TATTGAAACTTGCATATATTTCTCTTTCTCAACAACCCTTAggaatttat
tttattaatcAAAGTTTTATTCAACCTCGTCCCTGTGTAAaacaggcttt
atttacgttagtgattgacgccagagaatatcctggtgttggctgatgcg
agacTATCATCTCAAAGTGAGAACTTctcaaacaacaaaaaagtgaCGCA
TTCGAAAAGCAGACAATGCCAGGGTACTATCTGGGGTTATCAGTAATAAG
CATAAATAAcagataatacgcagggaatgAGGTTGTGTTTTATTGACAAA
TTGTTCACAAATAATCGAATAACctctttaaattaaaaatttcaggCATC
TATCAGACTTGGATAAAGATGGCGCATTGAACTTGGAGGAGTTTCAGATT
GCAATGCATCTGGTTGTGTTAATTAAACATGGTTACGAGTTACCGATGGT
TTTACCTCCTTCCCTTCTTGGTCAAGAGCAAGGTACGTTGTTAGTCTGCC
GTCAAAACATGCCTGGTTATTTTAAAATATCATAATTTGACTTTATCTTT
AGATAGTTGATGATTAGCTTAAGGTTTATTTCCATCTCAAACCATTCTAA
GGTTGTTGTTTTTTAGTGGTCGCTAACTGGATttctatataatatatatt
catgatatgcaccactgcaatgtcttctgacattacgtcatggaaccaat
agctcattggttggaagtgacgtaaaagcagtcaatacgtcactctCAAC
CAATCAgttattgggtggaacggaagacattgcaatggcgcatatcatga
atagaataTTATTTTTATCTCAAATGTCTCCTAATTGGAACAAGTTAACA
ATACGTTAtaatatataaaggtcagtggttataccttgactcgaacaaat
ttgtgttcgcTGCGaagggttcgagttatggatacTCCtctgtaaaatgt
ttttttttaccaccgggaATCTAGTATTGTATCCGAATCCATATAATCCG
AAAACAGGTGACTTTTTATGTTTCTGTATGACTTTTAAAACTTGTCCTTT
CATTATGTCAGTCCATCAAATGGCAAGTCAAGATGGTGTGGATATGAGCG
ATGAAGATGAGAAATTGATTTCTGATGACGAAAAACAAGAATCTGGTGAT
GTACGTAACGCTCTTTACGTCTTGCTATTTACATATTATGGAACACGATA
GAGTTTCAATAGTATTCCAAGATAATTAAGATAATATTATCCCGAATAGT
TACTCCTTCTCGGTTTATAATCCGCTAAAAGTGGTGAATTTTGACAACTC
AGAGAAATTGAAAGGTTTTCCTTCACTCCGCTTTTACCATGGGATTAAAA
ACTGTAGACGTACAGAGGAGACAAAAACGTTCTGACGATTCGCGGATAGG
ATATAGCGCTAGAAGTGTTGTATAGGGTATCTTATAAAACTGTTTCTCCT
TTATTTCTAGTGGTCCGCTGAATTTGATGCTACGGATGGGGTGAGTTGAT
TTATGGTTTAGGTCTGGCTGTACTTATAGTGCAGTGACCATtatataatt
atattttataGATATTTAAATGAGATTTATCATGTGCTATAGCTCGCTGT
TTCAAAATACTACAAATTTCGATTTGGTTATTCCTTACCACATTCCTTCT
CCACATCATTCCATATGATATGTAGGTGATTTTCTGTACTgctattttca
aaagataacCTCAATCTTTCAGTTTATGGGAACCTTTACTTGAACACTCC
TACTTTTTCACTGCAGGCACCAATTGATCGTGGTGAACGTATAGTGCAAA
CTTACGCGCAACCCTCCCCTACGTCCGTCACCGTGCCGTCAGAAACTCGC
GTACAACCCGTCTCGCACATGATCGAACAACAACAGATCAACCATGACGA
CGAAAACGAATTACCTTCCTCGCCTGGTGCCTTGGCTTCTCCTAACGATG
TCGCCGCGGCGGGTGGCAAAATGACAGCTATCGCACGACCCCGTGTAACC
GCTAATAAAAACGTTAATCTGATGGATGCGTCACCATGGCAGCTCCTGCC
ACCACCGTCCGGGAAAACTGGCAAATTCGGTGGCCCGAATGGTGGTACAA
CCGCGAAGAAAGCCTTGAAAATGGATAGTGTTGATAGTGAATTAGACTCG
GCGGGTGTCATCAGTGATAGCGAAAATAATAAACTGGTCTCGATTGATAA
TCACATGTCCCAAACGACGTCGCCGACAAATGGCGACAGTAGTCTGGATA
ACCTCGACGACGACGAACATTTGACGGACGACCACGATCACGAACGTTTG
AAAGTCAAGAAAAAGGATTCGGCATATTTCAGGAATTTGTCAAAAGAGAA
ATCGCGTTCGATTGATAGCTTACGGTCAGATATTTCGGAGAGTAGCATGT
TTGAATGGAAGAGACAATCCATTAGACGAGAATCGAGACCAAGGTATGAC
TCGTTTTCCCAAAGTTGAAACAACTGAATTATAGTGAGATTATTCTCACT
GATTCTGATTTCGAtacattttgttattttttatatttattttaagGAAA
ACGTCTTCTTTGTATTATTCCAATTGCAAAATCAATCGTTGAAGAACAAG
AGTTATTCGGTAGGTAAACTTTCTCGTAATACTTTTTCCTTATTAGGTCA
TTTACAGGGGAAAGCACACACGACACACCGCAATTCGAATCACCGCCCGT
CCCACCGCCACGAACGAATAAAGGACACGCCAGGGCGTCATCACTCGATT
TTAATCAAATGTTCCATAATCGTTCACCTAGAGTCAGTTCTGGTGAGTGC
TAATTGCATTTTCGCGGTTCATTtctctgttgttttttttacgAGGAAAG
TaagagaaaaattgaaacacTTATCAACCTTTAAAGCATTAGAACACTGG
GTTCGAGTCTACTAAGATTAATACAGTTACATTCTCAAAGACAACGAATT
CTGACctaatttttcttgtaaatttcTTTACCAGTCCCTTCGAAAACAAC
CGTGCTTTTATGGGTTGATTGACGTCAAACATTTGAAATGctaagaaaag
tgaaaaagaattgatatttttttagtcACTCGAGCATTAGATATCTGCGA
GATAATTGTGCCTGAGTGGTTGTAATCTTTTAGTATTATGACATACATCA
ATAATAAGTAACTGACTTTCAAATCGTTTAACGCACGTTGAATTTTCTCT
TTTAGAACCGAAATTACAAGTAACGACACCAACTGACGGAACAGGCAAGA
ATCCGGTAAGCCCTTTGAATTCTACATTCAATACTACATACACATTATGC
TTAATTTTTGCATTATAACTTCACGTAATTTAACGCAGTAACTTcactct
attcatgatatttatgacgtaatgttttcgacggaaacaccccggttttt
gccagtagtggcaaattggAGCTAtagaaaaattgctcaaaatttgcCAC
AACTGGCAAAAATGGAGgtttttccgtagaaaacattacgtcatgaatat
caagaattctCACTATATAATATGCATGTGATTAACATCAATTTTCAGCC
ACAAAAACCACCACGCTCAAATCCACCAAGCACTTCTTCAACTAATAACT
CGTCTGCCGCCCCCACTGCTGCAGCCCGCCCTCGTTCGTCCAAGGGTGAT
GAATATCATAGGTCACGATCACTTGATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000722XLOC_000722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001337-exon-sc0000010-1491911889:226394..226584TCONS_00001337-exon-sc0000010-1491911889:226394..226584Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:226394..226584TCONS_00001337-exon-sc0000010-1510915933:226394..226584Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:226394..226584TCONS_00001337-exon-sc0000010-1575043694:226394..226584Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:226991..227592TCONS_00001337-exon-sc0000010-1491911889:226991..227592Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:226991..227592TCONS_00001337-exon-sc0000010-1510915933:226991..227592Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:226991..227592TCONS_00001337-exon-sc0000010-1575043694:226991..227592Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:227843..228125TCONS_00001337-exon-sc0000010-1491911889:227843..228125Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:227843..228125TCONS_00001337-exon-sc0000010-1510915933:227843..228125Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:227843..228125TCONS_00001337-exon-sc0000010-1575043694:227843..228125Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:229949..230257TCONS_00001337-exon-sc0000010-1491911889:229949..230257Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:229949..230257TCONS_00001337-exon-sc0000010-1510915933:229949..230257Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:229949..230257TCONS_00001337-exon-sc0000010-1575043694:229949..230257Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:233925..234100TCONS_00001337-exon-sc0000010-1491911889:233925..234100Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:233925..234100TCONS_00001337-exon-sc0000010-1510915933:233925..234100Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:233925..234100TCONS_00001337-exon-sc0000010-1575043694:233925..234100Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:234702..234765TCONS_00001337-exon-sc0000010-1491911889:234702..234765Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:234702..234765TCONS_00001337-exon-sc0000010-1510915933:234702..234765Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:234702..234765TCONS_00001337-exon-sc0000010-1575043694:234702..234765Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:235289..235425TCONS_00001337-exon-sc0000010-1491911889:235289..235425Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:235289..235425TCONS_00001337-exon-sc0000010-1510915933:235289..235425Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:235289..235425TCONS_00001337-exon-sc0000010-1575043694:235289..235425Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:236005..236093TCONS_00001337-exon-sc0000010-1491911889:236005..236093Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:236005..236093TCONS_00001337-exon-sc0000010-1510915933:236005..236093Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:236005..236093TCONS_00001337-exon-sc0000010-1575043694:236005..236093Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:236404..236433TCONS_00001337-exon-sc0000010-1491911889:236404..236433Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:236404..236433TCONS_00001337-exon-sc0000010-1510915933:236404..236433Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:236404..236433TCONS_00001337-exon-sc0000010-1575043694:236404..236433Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:236710..237386TCONS_00001337-exon-sc0000010-1491911889:236710..237386Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:236710..237386TCONS_00001337-exon-sc0000010-1510915933:236710..237386Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:236710..237386TCONS_00001337-exon-sc0000010-1575043694:236710..237386Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:237590..237735TCONS_00001337-exon-sc0000010-1491911889:237590..237735Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:237590..237735TCONS_00001337-exon-sc0000010-1510915933:237590..237735Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:237590..237735TCONS_00001337-exon-sc0000010-1575043694:237590..237735Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:238149..238198TCONS_00001337-exon-sc0000010-1491911889:238149..238198Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:238149..238198TCONS_00001337-exon-sc0000010-1510915933:238149..238198Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:238149..238198TCONS_00001337-exon-sc0000010-1575043694:238149..238198Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1491911889:238492..238625TCONS_00001337-exon-sc0000010-1491911889:238492..238625Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1510915933:238492..238625TCONS_00001337-exon-sc0000010-1510915933:238492..238625Clytia hemisphaericaexon
TCONS_00001337-exon-sc0000010-1575043694:238492..238625TCONS_00001337-exon-sc0000010-1575043694:238492..238625Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:226394..238625 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000209687	1.25402e-09	1.78684	0.0283768	0	0	0	0	0.685337	3.22468	2.33826	0.364327	3.18985	1.07683	0.698174	1.66768	1.99033	2.36352	1.24409	3.03339	5.95966	1.91309	0.587192	3.21591	1.29918	2.28495	0.000438719	0	5.47492	3.05847
Blast
[Close]
BLAST of TCONS_00001337 vs. Swiss-Prot (Human)
Match: REPS2 (RalBP1-associated Eps domain-containing protein 2 OS=Homo sapiens GN=REPS2 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.384e-25
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1 
Query: 1471 NEEMRITQEQREYYTNQFKSLQPNEDDVIKGPQARDFFLKSNLAMETLSKIWHLSDLDKDGALNLEEFQIAMHLVVLIKHGYELPMVLPPSL 1746
            +E  RIT+EQREYY NQF+SLQP+    I G  A++FF KS L++  LS IW LSD D DGAL L EF  A HL+V  K+GY LP  LPP+L
Sbjct:  273 DEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARKNGYPLPEGLPPTL 364
The following BLAST results are available for this feature:
BLAST of TCONS_00001337 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
REPS25.384e-2557.61RalBP1-associated Eps domain-containing protein 2 ... [more]
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