TCONS_00001335 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001335
Unique NameTCONS_00001335
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length932

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001335 ID=TCONS_00001335|Name=TCONS_00001335|organism=Clytia hemisphaerica|type=transcript|length=932bp
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
CTGAGGCCACACTGCAACAAGTTACTGACGTCATCAGATTcgtttgttga
aaattttcactctgtgaaaaattgtaaatagtgTATTAAAATTATAAAAC
ATAACAAAGGGTTTGCTAGATTAGAAACCTAAATAATTTTTAACTGTTTT
CGATTTAATTGCTACTTATCTTTTATTTGAAC
Run BLAST on NCBI

protein sequence of TCONS_00001335-protein

>TCONS_00001335-protein ID=TCONS_00001335-protein|Name=TCONS_00001335-protein|organism=Clytia hemisphaerica|type=polypeptide|length=249bp
GGGDNNKVEGAEPHATPNKDGGNSDENLIHVQPKKVSGFISPIHSSIRCD
GTQTVPRTPSGGKAQNKILISATINFHNKQKKMAAQDSIQDTRTELADLL
KKKEELAVSLANLERQIYAFEGSYLEDTQLYGNIIRGWDRLLSQKATGPN
QKIEKRNRKFKESERLFSKSSITSAAAVAGMVQQDDKKENIDRIDSTLHH
SHGEHSGKIMKNSHIRKKKSSKHRIELKLKKGLSKNREVDIDGDEAFDN
Run BLAST on NCBI

transcript from alignment at sc0000010:201773..213990+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001335 ID=TCONS_00001335|Name=TCONS_00001335|organism=Clytia hemisphaerica|type=transcript|length=12218bp|location=Sequence derived from alignment at sc0000010:201773..213990+ (Clytia hemisphaerica)
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTAagtatttttagtttgaaagTAAGAAG
GAAATTGCCAATAAAAGAATATGTTTGTTGAGAAATGGTTTTTGAGGTGT
GCTTCAGTTTGGCCAGTTGCATagaattgggccattccagaaaaaaaaat
taccccctaccgtagagtcgtttaatatcgacatgtgtcttgttatttcg
acatagctgtaggctggtcttcgaaataaaaaatcaaacataaacaaata
cataccaaagttatcaatcaatcactaaattgtactccatagtgtcctcc
cccccctttataaagggggggggaccaattttccaattttgaatgggtga
ggggggaaaatgaaaatttgaatagtaaagcgGGGGAaaaacatcgatag
ttggcaaatttggtggggggaagtgtgaaatcacttcaattttatctcag
TAACCAAGATCATGTGAtttagatcatgattgaaaaattaaccaattttc
tttctattttgtctagtattccttttgcagcaaaatttacgtttgtgtca
ggttgaaatttgagaaatttatacgggtatatggggggaaaatgatattt
tcagaattttctggggggaaagcaaaaaagaggggggaaactaaaaaact
gaaaagtcatagatagggggaaaaaaagaggggggagatttaaaaaaatc
aggaatttggtggggggaacaaaccctggaggacactatgtacTCTCCCT
ATCATTTCACAcgtcatagaccttttttcaaagagaatgtcctgttgaat
aattatgtagtccagccataaaaaNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttgtaataattatgc
atggttttatcattgtttttctgctggactacataattattcaacagggt
ggcctctttgaaaaaaggtctattgttgaAATGTAATAAGAAACTTGAAG
TgggttttttttcgaaaagaaaactttaacgatgtataTAGTCACTAGAA
ACTAATTtgtaattagcatgctttcattgtCATTCAACGGAACGAAGATA
TCCAAATAAATCAAATCAACACTTTGCACGCTAgtaattttttagtagac
ctttttaccgtgaaccgaaaataataaaaagaacccggtttccttttgaa
tttaatctGACCGTcatactggccatcacggcgtgcggcctcttagcgcc
tagagcgtgtgtttttgataaataaggaaggggaaaccaggctaagcgca
caaattatttttatcacgtgacttgaagcgtaataaaattgtaaaatttt
gatgatgGGCACGAGAAAGTTAcaaggaagtttgcatgcgtttcgtgtgc
tgtgtaaaactgctcataatttggctgtttttttaattgaaaggattgca
atgtttattggacttctagtttgatggatgaacttgtttgataagaatga
taccaagaattttattcaaggtttgttttgattattttacagatccggtg
tcgactttagaagacgcatgtcgatattagacgattctacggtaatggat
gacatcaatttttgaaataaattttggcacggaattccaggcaaactttg
aagagaaagtatcggaattccatgaattttacttaattttgcattaaagt
attggaattccatgatttttttaggttacagtaacggaattccacggttt
tgataggtattttgtaaatttgttacagAAATTCCgaactttcttgaaag
caatttgctacggaaattccatgtcgtccattggggggtaacgaataaaa
aactggaatggcccattgacAGTTGCAAAATTCTGCTAATTTTTTCGCAA
CGCTTCCAAAAAAAGGTGCCTAAAAGCTGCGCTACAAAGTATGCAACGCT
TCCAATCAAAGTCTGTGATTGAAAACTTTGAATACcagagtatttttttt
ttgaatgacaGTCAAAATCAGGCAATATTATAGATAGTCTGGGAAAATCC
TTCAAATTGCACGCAACATCTGAGAGTCCCCTCtgttagcaactccagaa
gtcatgcaactttcgttgacgtcaaaccaaatgtttcatttttcggTGAA
CTTTGAaccttttgaactttttttctatgtatgctaacgCGTTCctgttt
ttactaaatgaaagcccgtgatcttagctttccagcggtatataacactg
tggacacgggctagacggcaaattggtaaaatgccgaacgttttgcaaaa
ttttgaatattgtttgccgaagggagaaaaaaaattgcaactattgatga
acaaatgtgtccggaaacggaggaaaatgtatttgaaggctgaaactttt
tatgtttatcagaaaaagggtgaggaattcaaaaatcacattcactaatt
ttagttctttcattttcatgtagtttttttcacttttttgcttcttttgc
atgggaatgtcccaaaaaaaagtttttatgtctgccgaaatggattttct
tttcatttggggtttctcctttcaggaaaacttattctttactcataagt
ttttgttcctccatttccagaggccccttgaaaatgggccctaccacctt
ttttgacacatttcaaccttttccaagctacttttcttcaaaaacaaaaa
taaaacaatgcaatgtcttctttttcaaaaaaatatatatctttcgttat
tttgataaatatactaaatattttacaaatatttttatgtaataatattc
taacaccatcaaagaattctccctccaaatttcaggtctctagctacact
agaaaaagagatatgcaaaattgaagaagcaagactggaaaatttctttt
ttttcttttttgatacattttttcgaatttttccaagctattttttgaca
tttttagtcaaatttttgacactaaaatttgaatatctttacaaccactt
atcctctggaggcctatgacccctcattttctttctttttcaaagctcta
caagataggataggttttgaaaaaaaaattaaaatttgaaaaatcttctg
gagttgctacctCTGTCTGCGTGTCCAGTCAGGGACCAATCTAGTTTAAC
CTagtacaaaaacaaacctcaaaaaaaaaggttaaaattaTTAAAGTGAA
GAAAAGTTAGAGGGGAAACTTCAGGTGGTAAGATCATCACTGATGCCGAA
ATTTTCTCAGAAGACGCCAACATTTGggtgtttaaaataaaaatggcaAT
TACAGTATTGCTCTTTTTTGCAATTATTgtcgaaaacggcaattttttca
acgatgaaatgctgaatcagcagaaaagtaaaaaaagtaaataaatgaaa
attgctgttttcggcaattattgccgctttgggaaataaaagttgatttt
attattgagcacgtggtatttgacactcTCGCAATAAATAGGTCCACTGT
GCCTCcttcagttttgttttcaactggtttttgccggaaatgcagatagc
aaaatcgagtcatatgtaaacaaacttacGACGAGggttttgttttcctt
ttctgactgtgtttcggcatcgatgcaggatcctTGTTGcatattatttt
agaatttttcatgttattgagcaatgaaaaattgaaaaaatcacttttaa
aaatctgaaaaaccttTTCCTTgatgcaattttacaattttcaaacacct
ctgacatctttgcccttataaggacgacaaattttgctgactctgcattt
catcgttgaaaaaatttccgttttcggcaataattgctaaaaagagcaat
aattgctgtttttatcttaaacacccaactggcCAATCCTGCCAAATTTC
TAGTCAATTAGATaactatttcaaaagttatcaaaaatatttgttttgat
gcaCGCAGGGCTAATCTTGTATTAATCTTAAATCATAAATCgttgaaaag
aatttaaaaagttgaaaaagttaaaaatgaaaaagaaaaagatcctTCTT
CGTGTTAGAAACTTTATTATTAGTATAGAGATACTTTGTAGCCTCCTGAT
TTCGCCTTTATGATTATTTATACGTTCTAAATTGAAAGTAACATCATCTG
GAAGGTAGCTCGTTGGAGTTAAACACCCTACTTTTTGCAGGTGTGTTTTC
AATTCGGTGGGCcttcttctttttaattttcaatgcaATATTGTTGGTCA
TGATTTTCTTATCAGCAATCAATTATATAATACATACTATTTCGccttgt
ttatgattttttgaacgTATATCATTGATGAAAGTGACAGCCTCTAGAAA
GTAGCTCGTTTGAGTTAAACACTCTGCTTTTTGCTGTTTTCAAATTCAAC
GAGTCATCttctttgtaaatttgttaTGTGCAATCAATATTGTATTCTTC
TTTACCAGGTCAGTTTGGCCAACCTTGAACGACAAATTTATGCATTCGAA
GGAAGCTACCTTGAAGATACACAATTGTATGGAAATATAATCCGAGGATG
GGATCGACTGCTCTCTCAGAAGTGAGTATCTAATAGTCGTACGTTTTTGT
AATAGAACTAAATAGATTGGATTGAATAGGATTCCTTATTGTTACTATTC
CTGAAAAAGAAATCCTGATAAAGTCCCCTGTTGTGGATGTCCAATCTTTA
AGTTAACTTTGACAACCTAAAAATGCTGCAACTTAAGTAACTTCCCTTGA
AATTCCAGAAAGTTTAAGGTTTAAAATTCCAAAGGGCGAACTTTTATCAG
TTTTTAATACATAATGACTGGTGAGGGCTTTACTGAGATGTATTGCTCGA
GGTCAAATATCGAACCGAGCTCGCCaggtttctttgaaaatacagtGAAG
tgtccataactcgaacctctgtaAGCCAgctgtctctttaactcgagcaA
CTTTGCTGGTCCCTCCGGTTAACAATTCCTTAAAAACCTTAacccataac
tcaaaatttccttaactgTAGAAAGGGGATTGAAGGAAACGAATTAGTTT
CAATAATGGCAAAGGCCACATCTAAATATATTGTTTGTAATACATTAGat
ctaaatgaaaagaaagaagaatataAACTAATCTGAACATCTCCCCTTCC
CGGAGAGGTCATGGCCACTGTAGATAGTGTTcggtttctttttatatata
cagTTCAACGTTTCTTTATATATATATACAGTTCAACGTTTCTTTATATA
CAGTTCAATGGCTCTTTCCCCTATCGGCGGGGAGCAAGTGGTTGTTGTTC
CAAGAGGCCAGGCGCGTTATGAGATGCTAATCGTCGTAGGATATTTGATG
ACGATCTGGTAACTGTTGCTTGTGTTGAATGTGCTGGCTGAGGCTGAGCG
GGCATAGGAACTGTTGGATGAGGAATAGTTGGAGGAGTAGTCTCTAATAG
TGANTTGGATGAGGAATAGTTGGAGGAGTGGTCTCTAATGGTGAGGCTGG
AAGCAGATTGGTGGGTGTGGGTAGTGCTGTTGGTGATACAAATGTTGCTG
GTCGAAGGAAGCGACGATTTTGCAGTGTCACCCTCCCTGAGCCATTGGTT
CTGACTGTATTGTCTGTTAGGGAGTGTTTCTACAATTATccagtgttaaa
agttcttccgtctcagacggatttccgtctcagcgAAGTATAATAAAAGG
CTTTTCTGTCTCAAAATcctgcataattcaccaaaagttcaagaatatgt
gctaattttctgtgtaaaatccattttccgtctcagacgaaaatcttgct
ttgaccactgattATCCCAGAGCGAATCCATCGGCGTTGATGCTTCTTAC
TACGGTTTTGGATGACGACAGTGGTTCCAACGGATAGGGACGGTAATGTT
TTGGCGTGTCTGTTGTACTTCTTACTGACGACATGGTTTCGTTTGGAGAA
TGCTTCTTCCCGTTGTCTTGCTNCAAGTGGATATCAGGGTGGCACTGGTG
GCTTCATTGGTTCCAAAATGATACAGGCAGTTTCAGCCGCTATATTTATC
AATAATCGTCAGATATTGGTGACTTGCAATAATGAAATAATCACCGGTGA
TTATTTGGAATGGGTATTGCGGTGGAGGGCTTGGATGATCGGTTCCGTGG
GCTGACTGGGTGAGTGACTGATACAAGTTTTACAGCAGTCATGGATTCGT
TGGATATCTTTGTTGATTCCCGGCCAAAAGATACAATCTTTGACTCGAGC
CTGCATGCCTGTGCAGCCTTGATGGGCGGAATGGAGGGCTTGAAGGATCT
GATGGCGGAGGTTCTTGGGTATCACGAGGCGTTTGTCTAACATTATGAGA
CCATTCCAAAGCGATAGACGATTTCTAACTTCCCAGAATGGTCGTAGATT
AGCAGGTAGGCTTTCACGGGCTGTTGGGAAGCCGTCCTGGATGGTTTGTA
GCAGTAACGAGTAGTCAGTATCAGTTGATCCATGTTCACGAATCTGATCG
AGAGTAAGGAGTTGAACATGGTCAGTTGTTTGGCAATTATTGATGGCGGA
AATGGCACTGACTTCTGAATCGATGTCTGGATTACGATCATCTTCTGTCA
TGGTAGCAGTAGTTGTCGTTTGTCGCCACACTTTCATGGTCTCCTTAAAT
TAGTTNTAGCAGTAGTTGTCGTTTGACGCCACACTTTCATGGTCTCCTTA
AATGAGTCGATGGAAGCTACGCTGGCAGGGTTCCTGGACATGGCATCGGG
TCCACGCATCCATTTTAAAGGGCAATACAGGATGGTGAATCTGAATTTGA
GGGAACGGCTCTTTAGGTGCATTTTTTGTGTCACATTTACTATGCTGTTG
TAGTAGTAAATACCCATATCCGTCCTTGCTCCAATCAGTTTGTAAACAAG
TTGTGCGCTTATAGTCGAACGAACGAATACCTTCACTAACACTTGCGATT
AACAATTGCTTTGATTCAATAAAAAGTTTGTTCAAAGTCTCATTGAATGT
TAGAAAGTTTGGATGGTTGTTGATGATACTTGTTTGGGTGACATCGTCAC
ATGCGTTGTAAACCATTGATGCAATCTGGTTTGCTGGGATCCCTGCTATT
TGTTTGTAAACAGCCCAATCGATTTTGAATTTGCGAAACTGCGGATGAGT
CATGTCAGACGTAATGGAAGGTAGTTTTGCGGATTTATGTGAGGCGGTTG
GTACGACAGAAGGAGTTGGATTAGTTGTAGCATACTTAGTCGAGTCTGGG
GTACTGCTACTACTGACGTGTTGGAGAATCTTCATTATATCCCCAATAAC
TGTATTGCCCAGGTCTCTAAGGAATGACCTGTCCATAGATTAGAGGGCAA
TATCTCTAATGTCATTCGATTCTCTGTGAAGCTCTTTGCATACTGGCGTG
CAGCTTCttctatggcgcgccaaaaggctttttaatactaactttttttt
ataatatcaactttcttttataatactaaattttttttataataccaact
ttcactTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNataaaaa
aaaagttggtattataaaagaaaaattgatattataaaaaaaagttggta
ttataaaaaaaagttggtattataaaaaaaagttagtattataaaaaaaa
gttagtattaaaaagccttttggcgcgccatattCTTCTGGGATTCCAAT
ATATTGTTTGTAATACATTAGatctaaatgaaaagaaagaagaatataAA
CTAATCTGAAcattaactcgaacaaatttttgttccccgtgcgtgttcga
gctATGGAGTCCCTACTGCAACTGACGTCACAGGgattttttttaacgat
gaGCAACTCCGTGCTGTGTAAGCCCGTCGTTATGTGAAAAGAGCATTTAT
TCCATTGCGTAAAAACTCGTACAGACTGCctcaaaaaacaaaatgaaatg
gAAGTTCACCCCATTGTACTATCCATTTTTTATCCAAGTTTGTCatttaa
aatgtttcttttagacaataaattgttctctttaatgaatGGTCACAAAG
AAAAGAGAAATgagttgattttcaaatttttatagaGCCACCGGACCAAA
TCAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGT
TTTCGAAATCATCAATTACATCAGCTGCTGTAAGTAATGCTTTGCTCgat
aatttaaaaaatgtgtattttggAATAAAGTGGTGTACATCATCTACCGT
ATGAAAACGACCCGGGCGTTTATTGAAGTTTTtgttttaggaggggcgtt
tgaaagaaggggcgtttattaaataatttataGACAAGATTACATTAGTC
ACTGGTCTAAACTAGTTCGAATACCAAAATCGTACAATTATTATTGTAAA
TCTAAGTTTTTCTTCGTATTATATACTACTTGTTTCAAAAAAACGCCTCT
CCTAGGAGAAGCGTTCATTTGGGGAGCgttcattaaaaaatttttattca
aggAGGGGCGTTTAATCGAGGGGGTGTTTTaaagaagggggtgtttacGG
TATCTGATTTGACCAAGTTCGTTGTTGTCAGTTTTCATTCCCTTCTTCCA
TGTCCGAAAATTCGACCTTTGGTGTGTCTTTTACCAACTCAGTTACTATG
TTAAACCAGAGATCGTATAACTTTCATATAATGTTAGTTGAACGCTGACT
GCAGGCTGGTGTCCTAACTAATCTCCTCAGCTTCTATAATTCTATTTTTA
ATCCTATGTGCTAGTTCTCCAATGTATCGTTGGTATTAGAAGGAAGGTCG
TTTTACCTTTTGCTATAATATAATCCTCcggaatttttttgaatattttc
aggcGGTAGCTGGTATGGTACAACAAGACGATAAAAGTAAGACATTGTCG
TTTGAATATTATTTCATATTACTATTGAAATAGCGACCATTGTTCTAAAT
AAGAAAATCGGAATATTTATACTGGACCCTATGAATTAAATGAACCCTCT
AATTATTAAAAAACCATTTGCTAATCTAAGATCTGCGATATCTGGATAAT
TCTTGggatgattttgatatttttctcctgAAAGGTAGATACAAAATGTC
GcattatgagaaaaataaaaaaaactaaccTTACTCTCAAGGGTCTAAAA
TGAGGGAAATATCTTCGTAGAAAGTTTTACAGGCGCTGAAAAGATATCGA
AAAATCAACGGGTGAAGAGGAGGGGGCATTTATTTGGAACTCGAGATAAC
ACTCTAAACCCCTTtttgattgtaaaaaaaatattatcaattTAACGATC
AaacttctttcattttcatttttagaagagAATATTGACAGGATCGATTC
AACTTTACATCATTCACATGGTGAACACTCTGGCAAAATCATGAAAAGTA
AGAATTCTGTTCCTCTTCAGCCTTTCATTAGTTGACCTTAATCTATAACT
CGAAATCGTTCGAAAGTTAGATATTAGATCAAGAAGGCCCTAATCTTGAG
GTTGCAGGTTCTGTCCATAATGTCGAtgccaatgaagtataagcccgaag
ggctagaagtcaatctctttggtaggatttgaagccaacacatcctacca
aagttgcgcggccttgagcgacccacctggtttttacacaaatgacagat
tgaaactaaaatttaccgcttaatttcgaaaaatatatcactcgaaaaca
aaggaattgctagattcaatctgtcatcaaaaatacggcgcgtATCTTGA
GGCTTcgaatttttcttgcctgagaaaggttagagattgacctctagccc
ttcgggcttgaaactcaatgggcgatgcttgatatttttatttttctgtc
tTTCCTTCAGACAGCCACATCCGAAAGAAAAAGAGTAGCAAACACAGGTA
AAAACAATTAGAGTTAAACTCCTTTTATATGAAAGTCTTATTGGGCCATT
CTATTAAATTTCCatagggggtggacgaaccttttcaagtaaaaaatata
atttttgaaaatgtgtggatacccccaaTGGCAAAATTTGCTACGTAGCC
TGTTCTTaactcttcttcgctgactgTAAAGATAACGCGATGTTCGGTTT
GTTACGTTTAGGCAACTATAGTGACGTTACATTTAACGCATCAATGTAAT
GCTatctttcatttaaaaaaagtgcACTCCTTTGTTTTCTCCGATTTTAT
CCCAGAAAACTAGGACAAAGTGAGACACAGAATCTCGCTAACCGAAACAG
TATGAGACACggcaagttttttttcaaaatatgaaaagcGCCGCCCGTGG
GCGGGTTGGTACAGGCTACTTTTACGACACTTGACTTCTTTTTGTAGCAG
CTTGAAAAGGACTGGGGGAAAGTTTACCGGgtacattttttgttttttgt
ttcaggattgagttgaaattgaaaaagggGCTGAGCAAGAATCGGGAAGT
GGACATCGATGTAAGCATATTTTTTCCCCTTTTGAATGATAATTTTTGTA
TAATACagcggagtctctttaactcgaacctctataactcgattgtctcc
ttaactcgaacaaatttgtgttccccttgCGTGCTCGAATTATAGAGAAT
CTACTGTGTAGAAGTATTTAGCATAAGATTTTGCTCTAGCGCAAAAGTTC
TTACAATCATAGTCAGAATAATTTGGATTTCGCGGTATTTCGTCGTTTTC
AGAATTTCGGTTATGATGAAAAGGGCGATTTTAGCTTTCTACTTTATTCT
GAtgcatatttcgattttggattTTATTGCTTTCCAGTATTCCTTGCCTT
GttggaatatcttttttcaGAATGTATTGACAACTGCCAATTTTTATTGA
AGAGTTTCTGAATGTTATGTATGTCAGCGTTTGTAatgattttgttcgat
tttgttCTTTAGGGAGACGAAGCATTCGATAATTGACTGAGGCCACACTG
CAACAAGTTACTGACGTCATCAGATTcgtttgttgaaaattttcactctg
tgaaaaattgtaaatagtgTATTAAAATTATAAAACATAACAAAGGGTTT
GCTAGATTAGAAACCTAAATAATTTTTAACTGTTTTCGATTTAATTGCTA
CTTATCTTTTATTTGAAC

Coding sequence (CDS) from alignment at sc0000010:201773..213990+

>TCONS_00001335 ID=TCONS_00001335|Name=TCONS_00001335|organism=Clytia hemisphaerica|type=CDS|length=6000bp|location=Sequence derived from alignment at sc0000010:201773..213990+ (Clytia hemisphaerica)
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
GGGGGAGGGGACAACAACAAGGTTGAAGGTGCGGAACCCCACGCGACCCC
GAACAAAGACGGAGGTAACTCGGACGAGAATCTTATACACGTGCAACCTA
AGAAagtaagtggcttcatttcccccATCCATTCGTCCATTCGGTGTGAC
GGAACACAAACGGTTCCACGTACGCCCTCGGGCGGCAAAGCTCAAAACAA
AATACTTATATCCGCCACAATAAATTTTcacaacaaacaaaaaaagatgg
cggctcaagacAGCATCCAAGACACAAGGACTGAACTTGCAGATCTtttg
aagaagaaagaagagCTTGCTGTCAGTTTGGCCAACCTTGAACGACAAAT
TTATGCATTCGAAGGAAGCTACCTTGAAGATACACAATTGTATGGAAATA
TAATCCGAGGATGGGATCGACTGCTCTCTCAGAAaGCCACCGGACCAAAT
CAGAAGATCGAGAAAAGAAACAGGAAATTCAAAGAATCTGAAAGGTTGTT
TTCGAAATCATCAATTACATCAGCTGCTgcGGTAGCTGGTATGGTACAAC
AAGACGATAAAAaagagAATATTGACAGGATCGATTCAACTTTACATCAT
TCACATGGTGAACACTCTGGCAAAATCATGAAAAACAGCCACATCCGAAA
GAAAAAGAGTAGCAAACACAGgattgagttgaaattgaaaaagggGCTGA
GCAAGAATCGGGAAGTGGACATCGATGGAGACGAAGCATTCGATAATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000721XLOC_000721Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001335-exon-sc0000010-1491911889:201773..202093TCONS_00001335-exon-sc0000010-1491911889:201773..202093Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:201773..202093TCONS_00001335-exon-sc0000010-1510915933:201773..202093Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:201773..202093TCONS_00001335-exon-sc0000010-1575043694:201773..202093Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1491911889:206631..206743TCONS_00001335-exon-sc0000010-1491911889:206631..206743Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:206631..206743TCONS_00001335-exon-sc0000010-1510915933:206631..206743Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:206631..206743TCONS_00001335-exon-sc0000010-1575043694:206631..206743Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1491911889:210958..211051TCONS_00001335-exon-sc0000010-1491911889:210958..211051Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:210958..211051TCONS_00001335-exon-sc0000010-1510915933:210958..211051Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:210958..211051TCONS_00001335-exon-sc0000010-1575043694:210958..211051Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1491911889:211725..211758TCONS_00001335-exon-sc0000010-1491911889:211725..211758Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:211725..211758TCONS_00001335-exon-sc0000010-1510915933:211725..211758Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:211725..211758TCONS_00001335-exon-sc0000010-1575043694:211725..211758Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1491911889:212198..212269TCONS_00001335-exon-sc0000010-1491911889:212198..212269Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:212198..212269TCONS_00001335-exon-sc0000010-1510915933:212198..212269Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:212198..212269TCONS_00001335-exon-sc0000010-1575043694:212198..212269Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1491911889:212733..212769TCONS_00001335-exon-sc0000010-1491911889:212733..212769Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:212733..212769TCONS_00001335-exon-sc0000010-1510915933:212733..212769Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:212733..212769TCONS_00001335-exon-sc0000010-1575043694:212733..212769Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1491911889:213278..213332TCONS_00001335-exon-sc0000010-1491911889:213278..213332Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:213278..213332TCONS_00001335-exon-sc0000010-1510915933:213278..213332Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:213278..213332TCONS_00001335-exon-sc0000010-1575043694:213278..213332Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1491911889:213785..213990TCONS_00001335-exon-sc0000010-1491911889:213785..213990Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1510915933:213785..213990TCONS_00001335-exon-sc0000010-1510915933:213785..213990Clytia hemisphaericaexon
TCONS_00001335-exon-sc0000010-1575043694:213785..213990TCONS_00001335-exon-sc0000010-1575043694:213785..213990Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001335-proteinTCONS_00001335-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:201773..213990 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
115.707	102.736	119.398	116.214	86.3569	68.7633	78.2915	81.6233	72.8596	61.1558	63.6845	60.4262	41.3486	44.4322	38.7584	34.776	55.4394	58.0318	37.0355	42.4122	57.2173	57.5528	72.0728	67.5707	100.891	99.1644	40.7747	37.843	33.0052	36.3461
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015418Eaf6
Vocabulary: Cellular Component
TermDefinition
GO:0000123histone acetyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0016573histone acetylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016573 histone acetylation
cellular_component GO:0000123 histone acetyltransferase complex
Blast
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BLAST of TCONS_00001335 vs. Swiss-Prot (Human)
Match: EAF6 (Chromatin modification-related protein MEAF6 OS=Homo sapiens GN=MEAF6 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 9.310e-33
Identity = 72/109 (66.06%), Postives = 87/109 (79.82%), Query Frame = 1 
Query:  220 INFHNKQKKMAAQDSIQDTRTXXXXXXXXXXXXXVSLANLERQIYAFEGSYLEDTQLYGNIIRGWDRLLSQKATGPNQKIEKRNRKFKESERLFSKSSITSAAAVAGMV 546
            +  HNK    AA   I DTR ELA+L+K+K+ELA +LANLERQIYAFEGSYLEDTQ+YGNIIRGWDR L+ +    N K ++RNRKFKE+ERLFSKSS+TSAAAV+ + 
Sbjct:    1 MAMHNK----AAPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNS-NSKNDRRNRKFKEAERLFSKSSVTSAAAVSALA 104
The following BLAST results are available for this feature:
BLAST of TCONS_00001335 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EAF69.310e-3366.06Chromatin modification-related protein MEAF6 OS=Ho... [more]
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