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TCONS_00001330 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001330
Unique NameTCONS_00001330
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2716

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001330 ID=TCONS_00001330|Name=TCONS_00001330|organism=Clytia hemisphaerica|type=transcript|length=2716bp
AGTGTTTATACGCTTGATGATTGAAATctatgtttaaagattttttactg
ctgaaagtttaaaaaggaagtTTTTTAGGGAAGGctgtttaaggcttttt
gaggattttttaaaaaggtttttggGGATTTTGGAAACAAGCCTTAGAAT
TATTCAAAAATGTATGAAGCCTTCCCTATGtcgCAAGACGATCAAGATGA
TATATATGATACACCAGAAACTGAAGAAATAGCTCGCCCACCACCTCTGC
AACAGAAACCACAACGTCCAGGAGGGTACGCACGACAACCACAACACCAA
ACTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAAT
ACCACAACACCAATCTCCAGCAGCACACCAAGATAACTTCAATATGAGCA
ATAAACGCACACAAAACATTGATAAGCATCGTCAACAATCGTTCGCTAAT
AGTCGAGCAATGTTCGAACAGAGATCAACTTCACCTCCACAACCAGCTAT
CAATCGATCAGCTAAACCACCTGTACAACAACGTCGAAGTGATTCTAACA
ATAACCCGCCCTTCGCTCCCAAACCCAATATTTCTAAGCGCCCAACGATT
CCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCCCCAACCGATCCAACT
TCAAGAACCTCAACATTATGAAATGGATAACCAAAGCGAAGACTCGGGCT
GCCATGAGGACTTTTACATTGAGCCGCATCAAGCCAAAAATGCCGTCATA
CCCCACGAAGAAGAAACGTATGAGGTCACAGACGGGCCAACCTCCCCGGT
CGAAATCATATCCTCAAAACCTAAAGGCATGCCTGGTCAGCAATTCATTA
CACAACTAAATCGAATGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCC
TCACAGAGCAAACCAATGGCTGGAAGACCTCTCGTACCGACCCCAGATCA
AGAAGAAACTTATGAAATCGCACCTGAGAACCCTCGTTCACCACCATTAC
CCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCT
TTCGTTCAGAGCCGGCCACCAATGCCAGTACCATCACCACCACCACAGGA
AGAAGAAACCTATGAAGTGACGCCCGATCAAGCGCCCGCTTTACCACCCT
CACATCCTTCCTCGAGAAAATCTTCAAGTACTTCGTCTATAGGGGAATCA
CCGAGAACGTCCATTAAAGACAGATTACCAAATCCTCGAGATAACATACA
AGAAGATTATGAGATGATAACTCATAGCCAAAGACCGCCTCCTCAACTTC
CTATCTCTTCACGTCCATCTCCACCCCAACAAAGGCGCCCACCACCCTCG
TTAGAACCAAAAGcgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGCC
TTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAACCAC
AAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCTTTC
CAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACC
TACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAATG
CACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCT
GGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaa
attgaaccaaaacagaAGGgATGGTGACTTTGTGATACGAAACTCATCCA
AAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTGTCCGC
AATTTACAGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTAC
TGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAACG
AAATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATGG
CAATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatatttt
tgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTTT
AAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTAT
TTATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCAC
CATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTAA
TCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaaa
tagaaatctcttaggaattcctcgggggaattctattgtaatactcccga
aacaattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTAA
GATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATatagaa
gaaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGGC
CGATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATAT
TGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTTT
agtttagatttttttgttatgtaaatacgaatttgattatttttctaaat
aattaTTGATAGATGAATAGGTTTTCTAATGGCggataattcttttttta
aatatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttca
aatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:142677..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001330 ID=TCONS_00001330|Name=TCONS_00001330|organism=Clytia hemisphaerica|type=transcript|length=12464bp|location=Sequence derived from alignment at sc0000010:142677..155140+ (Clytia hemisphaerica)
AGTGTTTATACGCTTGATGATTGAAATctatgtttaaagattttttactg ctgaaagtttaaaaaggaagtTTTTTAGGGAAGGctgtttaaggcttttt gaggattttttaaaaaggtttttggGGATTTTGGAAACAAGCCTTAGAAT TATTCAAAAATGTATGAAGCCTTCCCTATGGTAAGTGATATTTTGCTTTG AATTCTTGAAATTATAATCTTAAATCTCTTTTTAGCAGGGGGGGTGTCGG TACTAAAACccaagacatatatgagtactacaaggttttttgacgatttt tgacataccctcacctaatttttgaaaaaggaattttagtacacatgtac tgaaatttatttttacattttagcaTAGTGACCACCTAAATAAGGCTTAT TTTGGAATTCGGTTCGAAGAATGTGGGTCTttggactttcaacaaaatgc cAACTCTGGTTATTTAAGCTGTCAATGAACCTGATATATCTCTATCTATT CTAGATAAAGACTCAGAAACAGTCAAGACACTTTTGCCCTGCTCTACTTT AGTTATTGCAAAGATTGATGGGTTATTTTTCACCTCTAATTTACAGAgga acctttttcctcagttgagataaaaatttcctattgaaatattaatgggg atacaaattctattgttccaaggttaaaaacccagtggggatatgatttt ggagtgcaatttttacacatggaattttgagtggggatgaaatcaaagtc aatttcccagtagggctgaaattcaagggtattctaccaccggggacaaa atttttgcttaatttgtgacacagggacgtatttaaatcttatatagaga gtttttattttttcattttgcctaaaatgctcAGTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagttaaatttcctaaaat ttggtgatttttagtactcatgtattaaaatttttcttaaatttcttgaa gacccccacctaatttgggattttagtacacatggtactaaaatgctttt aggctttttttgtaataccaccacgtcactaaaagtcatgatgtctgaaa ttttagtaccgacccccccccctctttttaGCTAAATTTATAGTTTTTCA CACAAAGACtataagctctagtttagacggccgactttctgccctgtcta ttctaattgttagagtaggcagaagtTGGGCAAAAAGTTGGCAGctaaag acattgcattgacgtcaaaagagggcgatgcattgactttagacggccca ctttatgcccactttgattcacaattagaatagacagggcaaaaagtggg ctgtctaaactagagctaagctCGTCTGAAAGGGTAAAAGAAAATTGTCA ATACTTTGTATGTATTGTCAGTACCTGGTAACTTTCAGTTTCGGAAATTT TCAATGTCATTATTAAGTATTCTACTCATTTTATCTTGAATTTGGTCACA ACTTTCATTTAGTATTGGCGTCATAAATGAGGTATTATTTCCTTGAAAGT TTGTGAGAGATCTATGGGCCTGTGTCAAAAAATGTTGCCTTTGAAGTAGG TTTAAAGCATTTTGTACATTTACGACGAATCTTTGTTAAAAAACAATAGG ccgcaaaattaaacaccttttttgacaacaaataatatgcccataacttt tgatctagagaagttgggattTTGAtgcaatacacttttttgctcagttt gaagagttCTTACGTAGTATAGGTcttctttgattttgaagacccccaaa aatcatgaattttctgacctttcaattttgtttggaaacgcaaaaaatcg aaaattatgcAAAAACTGCAGTTTTTCAAggttggtaacattcaaattcc gaatcagcaccctcaaattgaccaaaatcaatCATGAaaggacattttga aaaaaagtgaaacgttttggtGGCACTGCACTGGCCTACAAGTTTCCATT TCAATAGAGGGAAAGGTAATGATGTTTATCTCTAAGCAATTATAAATGAA CGATCTTAAAGCAGTAAATTGCTTTTATAAATGGTTTTGAAATTAGCTAA CCGCGTCTTCTGAAATGATTTCTATTAACTTAAATTAAGTTTTGGCTCCT ATGTCATATGATACGTTTCGTTTAAAAGAACATAGGCGGACAGTTTTATC ATGAAATTTAAATTGATAGAGATATTGTTAAGTAATCTGGTCTATTGAAA ACAACTTTTTAGCGTTCATTATCTGTAGAAAATAGATTGTAATCAAAGTC ACAGCTTaggttgtctgtacacagacccgatatctacggctaatttcaaa aattcatttccgtagacaaacgtgagatacactctggtacagagtacagC TTAGGGATCTGGATATTACTTTTGCTTTTTGCGTTTTGTTCCTATTTCGA ATTTAATCAGGTATAGATATTCTGTGATTGAAATATCTCAATTCTGCCCA ATTTAGTAACTATTACTGCTACTTTAATCATATAGCTTTCGTGcttaata tttttggaaaatagtttTGGAAGCCCTAGCGAATTTATTGTATTGTGTTA GCATCTTGAAGACATGGTTTTATGGGATTTGATTGTCTCAATTCTGCTAT AATTTAGTAAAAAATTTACTTCAATATACTTCACTCGTATAGCTTTTGTG CTCAATGTTTTATGtaggaatacacgtttttttataagaacaaactatat aagaacataaggcttcactggccaaaatgttaagagcaagttaagaacat tttaaggctttgtggactcaaaaccacccaatttcttaggaaaatagtca aaattattcacaaaatggtcaaaataagaacatgttcagaacaattttag gcttaaaactcaaaaagttcagaacattcaaggcttcaaaaaatttggat gtttttataaaaaaaacgcgtAGTCCTGGTAACCCTAGCAAATTTACTTG TATTTTCTCAATATCTTTACTttccttttctttatttttcatttatcaca tttttttttcagtcgCAAGACGATCAAGATGATATATATGATACACCAGA AACTGAAGAAATAGGTTGGTGTATTTGTATTTAAAGTTCTTGACTAGCAT AATTGAATGTCCAAGTTATTTTGTGACCAGCCAAAAGTATAGTTTTttat tctgtttgttttttttatacaaGTTCGTCAAAATTAGACGATATGTGGCG ACTAGGACAGAAATAATTTGATATTGAACGAAAACAACTATGATGATCAG TTAATcatggaaaaattttaaaccccaGATCAAAATATTATTCAGGAATA TTATTACAGTCTTGGTCAACTTAATGTATACACCGAATGTCAAAGTTTGA AACAGTCCATTTTTCATACTTTCGATTCAACTTTTACAGCTCGCCCACCA CCTCTGCAACAGAAACCACAACGTCCAGGAGGGTACGCACGACAACCACA ACACCAAACTCCAATACCACAACACCAATCTCCAATACCACAACACCAAT CTCCAATACCACAACACCAATCTCCAGCAGCACACCAAGATAACTTCAAT ATGAGCAATAAACGCACACAAAACATTGATAAGCATCGTCAACAATCGTT CGCTAATAGTCGAGCAATGTTCGAACAGAGATCAACTTCACCTCCACAAC CAGCTATCAATCGATCAGCTAAACCACCTGTACAACAACGTCGAAGTGAT TCTAACAATAACCCGCCCTTCGCTCCCAAACCCAATATTTCTAAGCGCCC AACGATTCCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCCCCAACCGA TCCAACTTCAAGAACCTCAACATTATGAAATGGATAACCAAAGCGAAGAC TCGGGCTGCCATGAGGACTTTTACATTGAGCCGCATCAAGCCAAAAATGC CGTCATACCCCACGAAGAAGAAACGTATGAGGTCACAGACGGGCCAACCT CCCCGGTCGAAATCATATCCTCAAAACCTAAAGGCATGCCTGGTCAGCAA TTCATTACACAACTAAATCGAATGACCTTAGAAAGATCTGCTCCCTCACT TCCCGCCTCACAGAGCAAACCAATGGCTGGAAGACCTCTCGTACCGACCC CAGATCAAGAAGAAACTTATGAAATCGCACCTGAGAACCCTCGTTCACCA CCATTACCCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGCATCCCATC TCGACCTTTCGTTCAGAGCCGGCCACCAATGCCAGTACCATCACCACCAC CACAGGAAGAAGAAACCTATGAAGTGACGCCCGATCAAGCGCCCGCTTTA CCACCCTCACATCCTTCCTCGAGAAAATCTTCAAGTACTTCGTCTATAGG TaagtaaaagagaaaaaaatttgccaGCCTGGTGATCTTTCTGGTTACTG TGAACATCACAGTTTGGTTTTTTCTGAAATTNAATTTGCCAACCTGGTGA TCTTTCTGGTTACTGTGAACATCACAGTTtggttttttctgaaatttaac CTTGTGAGGACGGACAATTTTATCGCGTATGTCTCATCACATTTCTGATC ATATAATGGAGAGCACGTATCCTCGTGTTATGTTCTAGCAGGTTACATCT TTATATATGTGAAAAAGTAAGAATTTCTCTCcgactatattcactcagga gatttgggtggcagagcagcatatgcatttcgtccttattgaGACTCATC CATCAGATATATATCTATCAGTGAATTGAGTTTCCTTCAAAAGAACTCCT ATCTTGTGATTTGATTGATTAAGCCTTCATCAAAAATATCCTGGATAATA ATTGTGGCGTGCAACTTAGTGTCCGGTATCACAGCCTGCAGTTTCATTTC TCGTCTAATTTGGaactagcctagttaactaagcctgtattcacaaggct aggataCACCGCTAATGGCAATATAGcattttcggcgctttaaagatttt ttatatttacggattttatgtttgccttggaatactggtAATTCAGTTAC AagttaccatcagatttatcctagtgactgaatcaaaccaGTTTAGATTT CTAGGCTTATTTGGAGCTAGGTGGTAATAATATCTAAGCAGGTCATAAAC TATTCGATTCATTCTACCATCATCTATCTTCTAATACCTACAGGGGAATC ACCGAGAACGTCCATTAAAGACAGATTACCAAATCCTCGAGATAACATAC AAGAAGATTATGAGATGATAACTCATAGCCAAAGACCGCCTCCTCAACTT CCTATCTCTTCACGTCCATCTCCACCCCAACAAAGGCGCCCACCACCCTC GTTAGAACCAAAAGGTAATGATCATTCTTCTCgttgaatttctttttgta cTTGCAGGTGTGTAGCAACTTATTCACATTCTTTACCAAGTAGGATGTTT AGGACATTCATTATATTCCAGATTTTTCCacgaaaaagttgattttgtat tggaaatccaggagttacaaaaaacattttacctTAGAAATCCGCtatcg tccaccccctgtatgctGTTTCTCAACAGCATTTCttcaactcaaaattt cagaaaaaaaacttttatccaCTGACATTggaattatttttctaaaattt aaagtGAATTTTCGTGAGGGGTATTGAAACTCTAGAAACTATGATCATTA ATATTTTGGGGAATGAAAAATAGGATTCTGTTGATATGTTGATTCTTTGT ATACAAAGAGAAAACACAAGTTGACATGCATGATAtcgttaatatttttt tgttgctttttaagGTCAAGAACCTGTATTACCTCGTAAgcataaatatt tatatttcattattttgtaaGCTAAGTCGAGTCTTCATGGTCCCTTACtt ataaagattttgttttaaaaaaaaactacgaACGAGGGGGGGggatttaa aactttctgatagTTGGTCTTTTATTTTAGCTAGAAAACTTGAGCTTTTG GAAGCCGAAGATAGTGATCTGATGACCCCTGATGCTGTATTGTGCTCCAA AGAACTTAATATTTCCTTTTCAGCCaaacatattttcaatatatccttca aaatatttttcatttcagcgCGCAACGAGAAACCGCAACGCCTTTTACCC TCGCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAAGTAAGTC AACTCGTTATATGCACCATAGCAATGTCTTTCACGGACCCaacatctgat tggttgaaattgacgtattgactgaatttaccaatcagctattggttccg tgatgtaatatcagaagacattgcaatggtgcatgtAATGAATAGGGTGT GTTTATAATTGATTGGTATTTTAAAGACAGGGATATCAATACGCTAACGA AGTTTTTTCTCTGTTGCCATCTTCTGCTCGAGAGAAAGATTCAAAGAAAT TGTGTTTTATCTTTGAGACTTTCTGATCTGAAGGTACCAAACTTCACACT ACTGATTGTATTATATGCTGCAATTAAAACCATTGTATAACAAAAACCCT CGACACAAGATTACCTACGAACCAGATTTTGCCAATTCTTTGGGGCGCAC ATGGTttatacccagctggcacacaacgttgtttcaacgttcatctaacg ttatatggacgctgtgaacgttagataaacgtcgaaaaaacgttatgtgc cagctggatAGTAAATACTCTTGAATGATAAGTGAGGGTAATAAATTGTT GGCAATAGATAAATTGGAACATCATGTCTTGTTTCTTTTTCCATACAGTG TCACAACCACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGTAAGCAAA ATACTGGGTTTTTGAAACTTTGCGTTTGTTCATGGTTCCTTTAGGTACGA CATTTACATAGTTCAGGTGGAAAGCTTTCACGTAACTTTTCGCGAGGttg aaaattcgcgaaaattattAAATAAGTTTTCGTAAAATAAAAGGAGTATG GAAGTCTCTAAGCCATAACGACGTATAATTTGCTGAGATCACCatgtttg aatgaaaaagactttgtagtattattttttgaaaaatacggAGTTAAAAG ACAGACCATGtcgtgattttctaaaaaagataatTTGTATGTCTTAAACG TAAAACTTTTGAGATAGATGATGAGTGGCCTAAATAATTATTGTCACGAA GTAGAGCCTTTGCTGAGTACTTTTTCTGTCTCGTTTTTGATGCTCTAAGG ATGGTTACTTCCTCGACTTAATGACTATTACTGGGACTTAAACGTCCTTA GAGATTTTGGAAATTTGGTCTATCAGAATGTTCCTCGTTCTTTTTTACCC TAATTGAGTCCGGCTGTCCGGTGCGTTTTCTTTTTAATCGTTTTctttca ctgacctttatatatccctggaccaagttactcaagcaaaatattatgat cggagtttttttgaaattggtacccgtgGAGAGGGCGCTAGATCTAGTTT TGCTTGTACATTAATGATGTATCATCGTTTGTCGTAAGGCAAAGTctcaa acactacaatggcttctttgagggtaccaactttcaaaaacttcgatcaa aggtGGCGGATATTGCTTGGttcagggatatataaaggtcagtgttttCT ATACAAAAAAATGTAAGGTATCATTTTTATGCAATGAGATCTGCAATATC CATCTGTGTCTCTTACCCCCGTGACTTACTACCATTGCAGTCTACCTACA TTCAGTCTAAGCAACAGCTGGCTCGAAGATGTCAAGTGCGGACAAAGGAA AACCAGCCTCGATATGGGTGCCATAAGTCCGAAATTATTTCGTCGTATAA ATGACCGTCGTTCAAGCTTATCTGCCGATGAAATTCAAGTCAATCACTCA ACTGCATGTGTCTTAGGGTAGGATGATATGATAAATCAACATtgactaaa aaagaaaacatgacaCACAAAGAGACATGGCGTGACAGTTGAGTTCCGGA CAAATATAATAGGCTTACTGTAATCCGTTTCCAGTACAGTGTGTCCCGAA TAAAGTTATCAAGAAAATCTTGGCAAAATCAATCAACTCGTTGGCATATT ACCGGGTGTGTCAGAAATAAGTTACcctttttgatttgatattgtaggcT TTTCGCCTTTTCTgacaatttttaaaattgacattttaggtttttaaaca taacttttgaacccatgaagtaaaattaaaaagtaatacaccaaatttta agttaggctttcctctgtATGATtcagaaacttttgaaaaacctCTCAAC TACTGACaacaatattaaattaaaaaaggATAACTAATTTCTGGAACACC CGGTAGTTTAAAAAGATATTTCGATTCATTCCTAGAACAAACAACTAAAT ACAAGCCAGTTGTAAATCGTTAACCCTCATACTGTGATGGAGGATTTTTC ATATACTAAAAACTGACCTCTTGATTCGGGACATGCTGTAAATTGCATGT TAACATGGAAATAACTGAACAATCAATGTTCATCAAGGATGTGAGACTTT CAATAATGTTGAAACTGGTGACGGactaaaattctgaaaataaaatgcaa aaaaaaaaaatacattagTTTACNAGACTAaaattctgaagaaaaaaaat gcaaaaaaaaaaatacattagTTTACTTTCGACGAGTAGATTTGCTTCTT TACTTGTTCGTGAAaataaatttcgcgaaattgaatgaaatggaaatttt taaagttttgttttcGACGTTTTGTAACTCCGAACGTTTTAGTTTTGGCG AAAGCTTGACAtcttttggaccattttcagttgatttaaGGCCTTCTAGG AAAATACATCAACGCGAAACGTTTCAAAATATTGACTTAATAATGGAAAT AAATCGAGAAATTTGTCTCGCAGAATTGAACCTtgtgaaaattaatccaa ttaaagcaCACTGACAAAGAACAGTTTAAACAATGAAATATTGATGATTT TGACGAACATTACCTTAACATAACCAATGACATACGAAATATCGActtta caaaatagaaatactTAACCACTCATACGCGTACAAAGTTATTCTAAATG AGACCTTCAATCTGTTACTTTTTTATGGAATTGTTCATTTAATATTTTAG CAAATTAATTATCAGACATTTTCTAGATACAGTTTTCCTTCCTTTTTGAA ACAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGATCGA AGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCGTACAA AAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACAAACGC CTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGAGCTT GATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGGTGAGTAC GTCTACGTTTAGGATACTGTTCGCCCCTTGAGGTACTCTGCACCAGaatg tatctcacgtttatcgcttcgtagtacactctgtgcgcattgtctgtttg ataaaaaaattcccgtatggagacctctgcgatgaagtatgatttatata aatagcaacacttctctcgtcttctccccctctctcaccaacactccatc gcagcggtcggtttgaaaaatctcaaatgagaaaaggcaatgacaacaga ccctctacggcaatgaattttgaaattagtcgtagatactgggtctgtgt acaggcAAACTTTGAGGGAGTCAAAGGTTATTTCTCTCTGCTACTCGAGA TGTTCAATGGCTCGAACGATCACTGTCTACTTCTTGGTGTTTAAAGTTAT TGTGACTTAAAAGTATTCCTAAAAGAAGCAAGGTGATTTTCCCCTGAATA AACCTTGACTAAAATTGGAAATTATGTTCATTTGAAACTCATATGAATCC TTTTGTGTTTGTTATTTCGTAGTATTTTCAAGTCAATCTCGTTGAATTGC CTGAAGGCTGCAAtacaacgctttttttataataatacactttataagaa tgtccatgataaaaatggccaaaaaattaaggataatgctaagaatatca ccatcatggaattttgctactcagctaagaatgacatttttagagcattt tcaattataaattgccaattacccccaagtaaggctcactcctttcacaa aaatgccattttatgcttgagacgtatgtactaaatgtcaaatctagtct gaattaggattctaacctaagaataatgtaagaatattttaggatgattt ttttaagaaaatccatgataaaatggatttacaccattcttatgaaAATA AGCGTGTATTTGAAGCACACATTTCAAGGTTTTCTAAAatcttttcttta ctttttaggATGGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTC CCATTTTCTATATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGTA AGTGTCCGAAAAAGTTTAACAATCGCTATTAAATGCTTTTCATTGATGTT AGGTGTATAATATTTTCTCAATGCAGAATTTCCTaatctaccttatcggg gaaaaaaatgtcggagttttatttaaaaaagatcttgtaaatcgacgttt aaagcacttatttcggttaataaagatgtaaaaaatatagattttaattt tggttggggtttaaagaattgggtaaaagttttggtcgggtgataaaata tcggggaaaaaattcgtagggggaaaatttcgtcaccccttcaaaatttt cgtcacttccCCCCGACATTTTTCCCAGATAAGGTATAGCAACGTAGGCA GAAATTTTCAAgatcaaaaattgaagaaaaagatttcgcgatttctttaa aaacaataatTCTAAAGAGCAAAACtttatggaaaaaaatataaaaggtA GAAATGTGTCCGTCCATATATTCTGTGAATTTTCTTACTTGATAGAAACT AGCCAAAATAggccaaaattacaaaattatctGCCTAAAAAGTATTGAAC ACAAACCGAAGATTAATTCTTTTCCATTTATAGGCTGCTTCAAAAAGACG GTAAAATGTACTTGGGAAGTTCTACTGAGGTAGGTCATTCATTAAACACT TATACATACTCGAAGTGACCGGGAAGGGACTCGGTGTCATCCTCCAAATA ATGTTATATGCTATGTCATGCATGGTAACACGCTCCATATTGAGTAATAT TAGCCATAAACTCtctggtacctaatagccgggggggggaggaggttgga aaaaatctcaaaacttaataagcggggcgttagaataaaaatgtcctagg tggaaaattttcgaaaaattaattagtgggggggcggctattaggtaccc gagagtaagccTTAATACAATCACAGTAGAATTTTCTTCTGCCTAAAACA GATTTTCACCTCTTAAAAACCATTTATTTATCAGTCATATTTTTGATCAG CTAAGATGGATTAATGAGTTTCTCAATAACTTTTTATTCTGCTATCTTTC AGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAACGAA ATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATGGCA ATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatatttttg ggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTTTAA ATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTATTT ATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCACCA TCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTAATC TCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaaata gaaatctcttaggaattcctcgggggaattctattgtaatactcccgaaa caattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTAAGA TCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATatagaaga aaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGGCCG ATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATATTG AACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTTTag tttagatttttttgttatgtaaatacgaatttgattatttttctaaataa ttaTTGATAGATGAATAGGTTTTCTAATGGCggataattctttttttaaa tatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttcaaa tgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001330-exon-sc0000010-1491911889:142677..142856TCONS_00001330-exon-sc0000010-1491911889:142677..142856Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:142677..142856TCONS_00001330-exon-sc0000010-1510915933:142677..142856Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:142677..142856TCONS_00001330-exon-sc0000010-1575043694:142677..142856Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:145789..145840TCONS_00001330-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:145789..145840TCONS_00001330-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:145789..145840TCONS_00001330-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:146166..147125TCONS_00001330-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:146166..147125TCONS_00001330-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:146166..147125TCONS_00001330-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:147920..148090TCONS_00001330-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:147920..148090TCONS_00001330-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:147920..148090TCONS_00001330-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:148845..148919TCONS_00001330-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:148845..148919TCONS_00001330-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:148845..148919TCONS_00001330-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:149525..149567TCONS_00001330-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:149525..149567TCONS_00001330-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:149525..149567TCONS_00001330-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:151931..152168TCONS_00001330-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:151931..152168TCONS_00001330-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:151931..152168TCONS_00001330-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:153135..153223TCONS_00001330-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:153135..153223TCONS_00001330-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:153135..153223TCONS_00001330-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:153810..153855TCONS_00001330-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:153810..153855TCONS_00001330-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:153810..153855TCONS_00001330-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1491911889:154279..155140TCONS_00001330-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1510915933:154279..155140TCONS_00001330-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001330-exon-sc0000010-1575043694:154279..155140TCONS_00001330-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:142677..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.45119 0 0 0 0.162602 1.81428e-05 0 1.22055 1.13352e-06 1.26513 6.10804e-07 0.000197351 5.1476e-07 1.99248e-09 8.29394e-05 0.000530223 0.288574 0.679563 3.11965e-06 0.0505611 3.54271e-06 2.00243e-09 0.0773698 2.26518e-05 0 0 0.00175131 0.00567991 4.78648e-05 0.00800562
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001330 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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