TCONS_00001329 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001329
Unique NameTCONS_00001329
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2753

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001329 ID=TCONS_00001329|Name=TCONS_00001329|organism=Clytia hemisphaerica|type=transcript|length=2753bp
GAACTTGTATCATATAAGTGTTTATACGCTTGATGATTGAAATctatgtt
taaagattttttactgctgaaagtttaaaaaggaagtTTTTTAGGGAAGG
ctgtttaaggctttttgaggattttttaaaaaggtttttggGGATTTTGG
AAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCTTCCCTATGtcgC
AAGACGATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGCT
CGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGAGGGTACGCACG
ACAACCACAACACCAAACTCCAATACCACAACACCAATCTCCAATACCAC
AACACCAATCTCCAATACCACAACACCAATCTCCAGCAGCACACCAAGAT
AACTTCAATATGAGCAATAAACGCACACAAAACATTGATAAGCATCGTCA
ACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAGATCAACTTCAC
CTCCACAACCAGCTATCAATCGATCAGCTAAACCACCTGTACAACAACGT
CGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAACCCAATATTTC
TAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAGGGTGGTACCGC
CCCAACCGATCCAACTTCAAGAACCTCAACATTATGAAATGGATAACCAA
AGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAGCCGCATCAAGC
CAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGAGGTCACAGACG
GGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTAAAGGCATGCCT
GGTCAGCAATTCATTACACAACTAAATCGAATGACCTTAGAAAGATCTGC
TCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGACCTCTCG
TACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCACCTGAGAACCCT
CGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGG
CATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCAGTACCAT
CACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGCCCGATCAAGCG
CCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCTTCAAGTACTTC
GTCTATAGGGGAATCACCGAGAACGTCCATTAAAGACAGATTACCAAATC
CTCGAGATAACATACAAGAAGATTATGAGATGATAACTCATAGCCAAAGA
CCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCACCCCAACAAAG
GCGCCCACCACCCTCGTTAGAACCAAAAGGTCAAGAACCTGTATTACCTC
cgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATC
AACATTCCACCCAGAACGCCAAAAATGTCACAACCACAAAACTCGATGCC
TCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGA
TGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAACGT
ATACCATCGTACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCTAT
CAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGT
TCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaaac
agaAGGgATGGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTCCC
ATTTTCTATATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGCTGC
TTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTACTGAGGGGTTTGAA
GGAGTACCTGAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAA
CACTGGTGGTAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTT
AGTACGCATTTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAG
AATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATT
CGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATT
CAATTGCAACCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTG
GATCATTGCTTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCT
TACTAATAGATCTTATTGGAGTTCGGGGGTattaaaatagaaatctctta
ggaattcctcgggggaattctattgtaatactcccgaaacaattccacaa
tgcatcgcttttttagaaaaatcaaaaacttcgaTAAGATCTATTTACAT
GGTCTCCGAAAAAGTCAGAACACTTACAGATatagaagaaaaaaagtatt
ttttatgGGATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAAT
CACAAAGACAAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTG
TTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTTTagtttagattttt
ttgttatgtaaatacgaatttgattatttttctaaataattaTTGATAGA
TGAATAGGTTTTCTAATGGCggataattctttttttaaatatttgtaATT
ATTGGTAActtaaatttacagaaaaatatttttttcaaatgtttataTTA
AAA
Run BLAST on NCBI

transcript from alignment at sc0000010:142661..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001329 ID=TCONS_00001329|Name=TCONS_00001329|organism=Clytia hemisphaerica|type=transcript|length=12480bp|location=Sequence derived from alignment at sc0000010:142661..155140+ (Clytia hemisphaerica)
GAACTTGTATCATATAAGTGTTTATACGCTTGATGATTGAAATctatgtt
taaagattttttactgctgaaagtttaaaaaggaagtTTTTTAGGGAAGG
ctgtttaaggctttttgaggattttttaaaaaggtttttggGGATTTTGG
AAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCTTCCCTATGGTAA
GTGATATTTTGCTTTGAATTCTTGAAATTATAATCTTAAATCTCTTTTTA
GCAGGGGGGGTGTCGGTACTAAAACccaagacatatatgagtactacaag
gttttttgacgatttttgacataccctcacctaatttttgaaaaaggaat
tttagtacacatgtactgaaatttatttttacattttagcaTAGTGACCA
CCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGAATGTGGGTCTttgg
actttcaacaaaatgccAACTCTGGTTATTTAAGCTGTCAATGAACCTGA
TATATCTCTATCTATTCTAGATAAAGACTCAGAAACAGTCAAGACACTTT
TGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATGGGTTATTTTTCACC
TCTAATTTACAGAggaacctttttcctcagttgagataaaaatttcctat
tgaaatattaatggggatacaaattctattgttccaaggttaaaaaccca
gtggggatatgattttggagtgcaatttttacacatggaattttgagtgg
ggatgaaatcaaagtcaatttcccagtagggctgaaattcaagggtattc
taccaccggggacaaaatttttgcttaatttgtgacacagggacgtattt
aaatcttatatagagagtttttattttttcattttgcctaaaatgctcAG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtag
ttaaatttcctaaaatttggtgatttttagtactcatgtattaaaatttt
tcttaaatttcttgaagacccccacctaatttgggattttagtacacatg
gtactaaaatgcttttaggctttttttgtaataccaccacgtcactaaaa
gtcatgatgtctgaaattttagtaccgacccccccccctctttttaGCTA
AATTTATAGTTTTTCACACAAAGACtataagctctagtttagacggccga
ctttctgccctgtctattctaattgttagagtaggcagaagtTGGGCAAA
AAGTTGGCAGctaaagacattgcattgacgtcaaaagagggcgatgcatt
gactttagacggcccactttatgcccactttgattcacaattagaataga
cagggcaaaaagtgggctgtctaaactagagctaagctCGTCTGAAAGGG
TAAAAGAAAATTGTCAATACTTTGTATGTATTGTCAGTACCTGGTAACTT
TCAGTTTCGGAAATTTTCAATGTCATTATTAAGTATTCTACTCATTTTAT
CTTGAATTTGGTCACAACTTTCATTTAGTATTGGCGTCATAAATGAGGTA
TTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCCTGTGTCAAAAAATG
TTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATTTACGACGAATCTTT
GTTAAAAAACAATAGGccgcaaaattaaacaccttttttgacaacaaata
atatgcccataacttttgatctagagaagttgggattTTGAtgcaataca
cttttttgctcagtttgaagagttCTTACGTAGTATAGGTcttctttgat
tttgaagacccccaaaaatcatgaattttctgacctttcaattttgtttg
gaaacgcaaaaaatcgaaaattatgcAAAAACTGCAGTTTTTCAAggttg
gtaacattcaaattccgaatcagcaccctcaaattgaccaaaatcaatCA
TGAaaggacattttgaaaaaaagtgaaacgttttggtGGCACTGCACTGG
CCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAATGATGTTTATCTCTA
AGCAATTATAAATGAACGATCTTAAAGCAGTAAATTGCTTTTATAAATGG
TTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATTTCTATTAACTTAAA
TTAAGTTTTGGCTCCTATGTCATATGATACGTTTCGTTTAAAAGAACATA
GGCGGACAGTTTTATCATGAAATTTAAATTGATAGAGATATTGTTAAGTA
ATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATTATCTGTAGAAAATA
GATTGTAATCAAAGTCACAGCTTaggttgtctgtacacagacccgatatc
tacggctaatttcaaaaattcatttccgtagacaaacgtgagatacactc
tggtacagagtacagCTTAGGGATCTGGATATTACTTTTGCTTTTTGCGT
TTTGTTCCTATTTCGAATTTAATCAGGTATAGATATTCTGTGATTGAAAT
ATCTCAATTCTGCCCAATTTAGTAACTATTACTGCTACTTTAATCATATA
GCTTTCGTGcttaatatttttggaaaatagtttTGGAAGCCCTAGCGAAT
TTATTGTATTGTGTTAGCATCTTGAAGACATGGTTTTATGGGATTTGATT
GTCTCAATTCTGCTATAATTTAGTAAAAAATTTACTTCAATATACTTCAC
TCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaatacacgttttttta
taagaacaaactatataagaacataaggcttcactggccaaaatgttaag
agcaagttaagaacattttaaggctttgtggactcaaaaccacccaattt
cttaggaaaatagtcaaaattattcacaaaatggtcaaaataagaacatg
ttcagaacaattttaggcttaaaactcaaaaagttcagaacattcaaggc
ttcaaaaaatttggatgtttttataaaaaaaacgcgtAGTCCTGGTAACC
CTAGCAAATTTACTTGTATTTTCTCAATATCTTTACTttccttttcttta
tttttcatttatcacatttttttttcagtcgCAAGACGATCAAGATGATA
TATATGATACACCAGAAACTGAAGAAATAGGTTGGTGTATTTGTATTTAA
AGTTCTTGACTAGCATAATTGAATGTCCAAGTTATTTTGTGACCAGCCAA
AAGTATAGTTTTttattctgtttgttttttttatacaaGTTCGTCAAAAT
TAGACGATATGTGGCGACTAGGACAGAAATAATTTGATATTGAACGAAAA
CAACTATGATGATCAGTTAATcatggaaaaattttaaaccccaGATCAAA
ATATTATTCAGGAATATTATTACAGTCTTGGTCAACTTAATGTATACACC
GAATGTCAAAGTTTGAAACAGTCCATTTTTCATACTTTCGATTCAACTTT
TACAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGAGGGT
ACGCACGACAACCACAACACCAAACTCCAATACCACAACACCAATCTCCA
ATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAGCAGCACA
CCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATTGATAAGC
ATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAGATCA
ACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCACCTGTACA
ACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAACCCA
ATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAGGGTG
GTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATGAAATGGA
TAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAGCCGC
ATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGAGGTC
ACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTAAAGG
CATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACCTTAGAAA
GATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGA
CCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCACCTGA
GAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCAAAAA
GCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCA
GTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGCCCGA
TCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCTTCAA
GTACTTCGTCTATAGGTaagtaaaagagaaaaaaatttgccaGCCTGGTG
ATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTTTTTCTGAAATTNAA
TTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTtggtt
ttttctgaaatttaacCTTGTGAGGACGGACAATTTTATCGCGTATGTCT
CATCACATTTCTGATCATATAATGGAGAGCACGTATCCTCGTGTTATGTT
CTAGCAGGTTACATCTTTATATATGTGAAAAAGTAAGAATTTCTCTCcga
ctatattcactcaggagatttgggtggcagagcagcatatgcatttcgtc
cttattgaGACTCATCCATCAGATATATATCTATCAGTGAATTGAGTTTC
CTTCAAAAGAACTCCTATCTTGTGATTTGATTGATTAAGCCTTCATCAAA
AATATCCTGGATAATAATTGTGGCGTGCAACTTAGTGTCCGGTATCACAG
CCTGCAGTTTCATTTCTCGTCTAATTTGGaactagcctagttaactaagc
ctgtattcacaaggctaggataCACCGCTAATGGCAATATAGcattttcg
gcgctttaaagattttttatatttacggattttatgtttgccttggaata
ctggtAATTCAGTTACAagttaccatcagatttatcctagtgactgaatc
aaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAGGTGGTAATAATATC
TAAGCAGGTCATAAACTATTCGATTCATTCTACCATCATCTATCTTCTAA
TACCTACAGGGGAATCACCGAGAACGTCCATTAAAGACAGATTACCAAAT
CCTCGAGATAACATACAAGAAGATTATGAGATGATAACTCATAGCCAAAG
ACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCACCCCAACAAA
GGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATGATCATTCTTCTCgt
tgaatttctttttgtacTTGCAGGTGTGTAGCAACTTATTCACATTCTTT
ACCAAGTAGGATGTTTAGGACATTCATTATATTCCAGATTTTTCCacgaa
aaagttgattttgtattggaaatccaggagttacaaaaaacattttacct
TAGAAATCCGCtatcgtccaccccctgtatgctGTTTCTCAACAGCATTT
CttcaactcaaaatttcagaaaaaaaacttttatccaCTGACATTggaat
tatttttctaaaatttaaagtGAATTTTCGTGAGGGGTATTGAAACTCTA
GAAACTATGATCATTAATATTTTGGGGAATGAAAAATAGGATTCTGTTGA
TATGTTGATTCTTTGTATACAAAGAGAAAACACAAGTTGACATGCATGAT
AtcgttaatatttttttgttgctttttaagGTCAAGAACCTGTATTACCT
CGTAAgcataaatatttatatttcattattttgtaaGCTAAGTCGAGTCT
TCATGGTCCCTTACttataaagattttgttttaaaaaaaaactacgaACG
AGGGGGGGggatttaaaactttctgatagTTGGTCTTTTATTTTAGCTAG
AAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCTGATGACCCCTGATG
CTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTTCAGCCaaacatatt
ttcaatatatccttcaaaatatttttcatttcagcgCGCAACGAGAAACC
GCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCACCCAGAA
CGCCAAAAAGTAAGTCAACTCGTTATATGCACCATAGCAATGTCTTTCAC
GGACCCaacatctgattggttgaaattgacgtattgactgaatttaccaa
tcagctattggttccgtgatgtaatatcagaagacattgcaatggtgcat
gtAATGAATAGGGTGTGTTTATAATTGATTGGTATTTTAAAGACAGGGAT
ATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCATCTTCTGCTCGAGAG
AAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACTTTCTGATCTGAAGG
TACCAAACTTCACACTACTGATTGTATTATATGCTGCAATTAAAACCATT
GTATAACAAAAACCCTCGACACAAGATTACCTACGAACCAGATTTTGCCA
ATTCTTTGGGGCGCACATGGTttatacccagctggcacacaacgttgttt
caacgttcatctaacgttatatggacgctgtgaacgttagataaacgtcg
aaaaaacgttatgtgccagctggatAGTAAATACTCTTGAATGATAAGTG
AGGGTAATAAATTGTTGGCAATAGATAAATTGGAACATCATGTCTTGTTT
CTTTTTCCATACAGTGTCACAACCACAAAACTCGATGCCTCCAAAGCTTA
TGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTTTGCGTTTGTTCATG
GTTCCTTTAGGTACGACATTTACATAGTTCAGGTGGAAAGCTTTCACGTA
ACTTTTCGCGAGGttgaaaattcgcgaaaattattAAATAAGTTTTCGTA
AAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACGACGTATAATTTGCT
GAGATCACCatgtttgaatgaaaaagactttgtagtattattttttgaaa
aatacggAGTTAAAAGACAGACCATGtcgtgattttctaaaaaagataat
TTGTATGTCTTAAACGTAAAACTTTTGAGATAGATGATGAGTGGCCTAAA
TAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTACTTTTTCTGTCTCGT
TTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTAATGACTATTACTGG
GACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTCTATCAGAATGTTCC
TCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCGGTGCGTTTTCTTTT
TAATCGTTTTctttcactgacctttatatatccctggaccaagttactca
agcaaaatattatgatcggagtttttttgaaattggtacccgtgGAGAGG
GCGCTAGATCTAGTTTTGCTTGTACATTAATGATGTATCATCGTTTGTCG
TAAGGCAAAGTctcaaacactacaatggcttctttgagggtaccaacttt
caaaaacttcgatcaaaggtGGCGGATATTGCTTGGttcagggatatata
aaggtcagtgttttCTATACAAAAAAATGTAAGGTATCATTTTTATGCAA
TGAGATCTGCAATATCCATCTGTGTCTCTTACCCCCGTGACTTACTACCA
TTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTGGCTCGAAGATGTCA
AGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTGCCATAAGTCCGAAA
TTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTATCTGCCGATGAAAT
TCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTAGGATGATATGATAA
ATCAACATtgactaaaaaagaaaacatgacaCACAAAGAGACATGGCGTG
ACAGTTGAGTTCCGGACAAATATAATAGGCTTACTGTAATCCGTTTCCAG
TACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCTTGGCAAAATCAATC
AACTCGTTGGCATATTACCGGGTGTGTCAGAAATAAGTTACcctttttga
tttgatattgtaggcTTTTCGCCTTTTCTgacaatttttaaaattgacat
tttaggtttttaaacataacttttgaacccatgaagtaaaattaaaaagt
aatacaccaaattttaagttaggctttcctctgtATGATtcagaaacttt
tgaaaaacctCTCAACTACTGACaacaatattaaattaaaaaaggATAAC
TAATTTCTGGAACACCCGGTAGTTTAAAAAGATATTTCGATTCATTCCTA
GAACAAACAACTAAATACAAGCCAGTTGTAAATCGTTAACCCTCATACTG
TGATGGAGGATTTTTCATATACTAAAAACTGACCTCTTGATTCGGGACAT
GCTGTAAATTGCATGTTAACATGGAAATAACTGAACAATCAATGTTCATC
AAGGATGTGAGACTTTCAATAATGTTGAAACTGGTGACGGactaaaattc
tgaaaataaaatgcaaaaaaaaaaaatacattagTTTACNAGACTAaaat
tctgaagaaaaaaaatgcaaaaaaaaaaatacattagTTTACTTTCGACG
AGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaatttcgcgaaattga
atgaaatggaaatttttaaagttttgttttcGACGTTTTGTAACTCCGAA
CGTTTTAGTTTTGGCGAAAGCTTGACAtcttttggaccattttcagttga
tttaaGGCCTTCTAGGAAAATACATCAACGCGAAACGTTTCAAAATATTG
ACTTAATAATGGAAATAAATCGAGAAATTTGTCTCGCAGAATTGAACCTt
gtgaaaattaatccaattaaagcaCACTGACAAAGAACAGTTTAAACAAT
GAAATATTGATGATTTTGACGAACATTACCTTAACATAACCAATGACATA
CGAAATATCGActttacaaaatagaaatactTAACCACTCATACGCGTAC
AAAGTTATTCTAAATGAGACCTTCAATCTGTTACTTTTTTATGGAATTGT
TCATTTAATATTTTAGCAAATTAATTATCAGACATTTTCTAGATACAGTT
TTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCTTTCCAACAAGCAAC
GATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAAC
GTATACCATCGTACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCT
ATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTG
GTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaa
acagaAGGGTGAGTACGTCTACGTTTAGGATACTGTTCGCCCCTTGAGGT
ACTCTGCACCAGaatgtatctcacgtttatcgcttcgtagtacactctgt
gcgcattgtctgtttgataaaaaaattcccgtatggagacctctgcgatg
aagtatgatttatataaatagcaacacttctctcgtcttctccccctctc
tcaccaacactccatcgcagcggtcggtttgaaaaatctcaaatgagaaa
aggcaatgacaacagaccctctacggcaatgaattttgaaattagtcgta
gatactgggtctgtgtacaggcAAACTTTGAGGGAGTCAAAGGTTATTTC
TCTCTGCTACTCGAGATGTTCAATGGCTCGAACGATCACTGTCTACTTCT
TGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCTAAAAGAAGCAAGGT
GATTTTCCCCTGAATAAACCTTGACTAAAATTGGAAATTATGTTCATTTG
AAACTCATATGAATCCTTTTGTGTTTGTTATTTCGTAGTATTTTCAAGTC
AATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacgctttttttataata
atacactttataagaatgtccatgataaaaatggccaaaaaattaaggat
aatgctaagaatatcaccatcatggaattttgctactcagctaagaatga
catttttagagcattttcaattataaattgccaattacccccaagtaagg
ctcactcctttcacaaaaatgccattttatgcttgagacgtatgtactaa
atgtcaaatctagtctgaattaggattctaacctaagaataatgtaagaa
tattttaggatgatttttttaagaaaatccatgataaaatggatttacac
cattcttatgaaAATAAGCGTGTATTTGAAGCACACATTTCAAGGTTTTC
TAAAatcttttctttactttttaggATGGTGACTTTGTGATACGAAACTC
ATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTG
TCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAACAATCGCTATTAAAT
GCTTTTCATTGATGTTAGGTGTATAATATTTTCTCAATGCAGAATTTCCT
aatctaccttatcggggaaaaaaatgtcggagttttatttaaaaaagatc
ttgtaaatcgacgtttaaagcacttatttcggttaataaagatgtaaaaa
atatagattttaattttggttggggtttaaagaattgggtaaaagttttg
gtcgggtgataaaatatcggggaaaaaattcgtagggggaaaatttcgtc
accccttcaaaattttcgtcacttccCCCCGACATTTTTCCCAGATAAGG
TATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaattgaagaaaaagat
ttcgcgatttctttaaaaacaataatTCTAAAGAGCAAAACtttatggaa
aaaaatataaaaggtAGAAATGTGTCCGTCCATATATTCTGTGAATTTTC
TTACTTGATAGAAACTAGCCAAAATAggccaaaattacaaaattatctGC
CTAAAAAGTATTGAACACAAACCGAAGATTAATTCTTTTCCATTTATAGG
CTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTACTGAGGTAGG
TCATTCATTAAACACTTATACATACTCGAAGTGACCGGGAAGGGACTCGG
TGTCATCCTCCAAATAATGTTATATGCTATGTCATGCATGGTAACACGCT
CCATATTGAGTAATATTAGCCATAAACTCtctggtacctaatagccgggg
gggggaggaggttggaaaaaatctcaaaacttaataagcggggcgttaga
ataaaaatgtcctaggtggaaaattttcgaaaaattaattagtggggggg
cggctattaggtacccgagagtaagccTTAATACAATCACAGTAGAATTT
TCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAACCATTTATTTATCAG
TCATATTTTTGATCAGCTAAGATGGATTAATGAGTTTCTCAATAACTTTT
TATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTA
TCATCAGAATAACGAAATCATACTCAACACTGGTGGTAAAGTGAAACTAC
TCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTTATAAGgaagaaa
aacgaaaatatttttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCT
TTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGA
CTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACCGAAAATATGGGA
TCAACATTGATCACCATCATTGTTTTGGATCATTGCTTTTTTATTAACGG
AGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTT
CGGGGGTattaaaatagaaatctcttaggaattcctcgggggaattctat
tgtaatactcccgaaacaattccacaatgcatcgcttttttagaaaaatc
aaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAAAAGTCAGAACAC
TTACAGATatagaagaaaaaaagtattttttatgGGATATCTATGAAAGA
CACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAAACTTGGTGATAG
AAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATT
TCTTGTTGCTTTTTagtttagatttttttgttatgtaaatacgaatttga
ttatttttctaaataattaTTGATAGATGAATAGGTTTTCTAATGGCgga
taattctttttttaaatatttgtaATTATTGGTAActtaaatttacagaa
aaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001329-exon-sc0000010-1491911889:142661..142856TCONS_00001329-exon-sc0000010-1491911889:142661..142856Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:142661..142856TCONS_00001329-exon-sc0000010-1510915933:142661..142856Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:142661..142856TCONS_00001329-exon-sc0000010-1575043694:142661..142856Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:145789..145840TCONS_00001329-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:145789..145840TCONS_00001329-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:145789..145840TCONS_00001329-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:146166..147125TCONS_00001329-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:146166..147125TCONS_00001329-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:146166..147125TCONS_00001329-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:147920..148090TCONS_00001329-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:147920..148090TCONS_00001329-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:147920..148090TCONS_00001329-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:148541..148561TCONS_00001329-exon-sc0000010-1491911889:148541..148561Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:148541..148561TCONS_00001329-exon-sc0000010-1510915933:148541..148561Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:148541..148561TCONS_00001329-exon-sc0000010-1575043694:148541..148561Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:148845..148919TCONS_00001329-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:148845..148919TCONS_00001329-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:148845..148919TCONS_00001329-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:149525..149567TCONS_00001329-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:149525..149567TCONS_00001329-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:149525..149567TCONS_00001329-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:151931..152168TCONS_00001329-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:151931..152168TCONS_00001329-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:151931..152168TCONS_00001329-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:153135..153223TCONS_00001329-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:153135..153223TCONS_00001329-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:153135..153223TCONS_00001329-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:153810..153855TCONS_00001329-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:153810..153855TCONS_00001329-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:153810..153855TCONS_00001329-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1491911889:154279..155140TCONS_00001329-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1510915933:154279..155140TCONS_00001329-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001329-exon-sc0000010-1575043694:154279..155140TCONS_00001329-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:142661..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00205361	0.40058	0	0.481487	2.80534	0.00789991	1.58978	0.0037081	0.890339	0.0278777	2.63266	0.895458	7.91691	10.5823	6.80408	10.221	4.75293	2.42079	15.6561	7.37303	2.43989	1.21303	1.33396	1.98615	9.43168e-05	2.89118	1.70768	0.70637	18.3894	19.554
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001329 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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