TCONS_00001328 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001328
Unique NameTCONS_00001328
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2681

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001328 ID=TCONS_00001328|Name=TCONS_00001328|organism=Clytia hemisphaerica|type=transcript|length=2681bp
CGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGCCACCTCTTCAGCCAC
CGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAAC
AATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGtcgCA
AGACGATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGCTC
GCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGAGGGTACGCACGA
CAACCACAACACCAAACTCCAATACCACAACACCAATCTCCAATACCACA
ACACCAATCTCCAATACCACAACACCAATCTCCAGCAGCACACCAAGATA
ACTTCAATATGAGCAATAAACGCACACAAAACATTGATAAGCATCGTCAA
CAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAGATCAACTTCACC
TCCACAACCAGCTATCAATCGATCAGCTAAACCACCTGTACAACAACGTC
GAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAACCCAATATTTCT
AAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCC
CCAACCGATCCAACTTCAAGAACCTCAACATTATGAAATGGATAACCAAA
GCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAGCCGCATCAAGCC
AAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGAGGTCACAGACGG
GCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTAAAGGCATGCCTG
GTCAGCAATTCATTACACAACTAAATCGAATGACCTTAGAAAGATCTGCT
CCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGACCTCTCGT
ACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCACCTGAGAACCCTC
GTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGC
ATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCAGTACCATC
ACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGCCCGATCAAGCGC
CCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCTTCAAGTACTTCG
TCTATAGGGGAATCACCGAGAACGTCCATTAAAGACAGATTACCAAATCC
TCGAGATAACATACAAGAAGATTATGAGATGATAACTCATAGCCAAAGAC
CGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCACCCCAACAAAGG
CGCCCACCACCCTCGTTAGAACCAAAAGcgCGCAACGAGAAACCGCAACG
CCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAA
AAATGTCACAACCACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCA
AGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGA
TACTTGTCCTCAACCTACCATAGAACGTATACCATCGTACAAAAAGCAAA
CACAATCTGCAAATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCC
GCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAG
AGCGTGCgaaattaaattgaaccaaaacagaAGGgATGGTGACTTTGTGA
TACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCAC
GATAATGTTGTCCGCAATTTACAGCTGCTTCAAAAAGACGGTAAAATGTA
CTTGGGAAGTTCTACTGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGT
ATCATCAGAATAACGAAATCATACTCAACACTGGTGGTAAAGTGAAACTA
CTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTTATAAGgaagaa
aaacgaaaatatttttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGC
TTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGG
ACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACCGAAAATATGGG
ATCAACATTGATCACCATCATTGTTTTGGATCATTGCTTTTTTATTAACG
GAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGT
TCGGGGGTattaaaatagaaatctcttaggaattcctcgggggaattcta
ttgtaatactcccgaaacaattccacaatgcatcgcttttttagaaaaat
caaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAAAAGTCAGAACA
CTTACAGATatagaagaaaaaaagtattttttatgGGATATCTATGAAAG
ACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAAACTTGGTGATA
GAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAAT
TTCTTGTTGCTTTTTagtttagatttttttgttatgtaaatacgaatttg
attatttttctaaataattaTTGATAGATGAATAGGTTTTCTAATGGCgg
ataattctttttttaaatatttgtaATTATTGGTAActtaaatttacaga
aaaatatttttttcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:140226..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001328 ID=TCONS_00001328|Name=TCONS_00001328|organism=Clytia hemisphaerica|type=transcript|length=14915bp|location=Sequence derived from alignment at sc0000010:140226..155140+ (Clytia hemisphaerica)
CGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTAACAATCGAGTATTAT
ATATGTCAAAGTATCGTACTCTAGAGATTCACTATTTCACGGCTCGACTA
TTTATTCCTTAAAGATTAGAATGAATTGTACGGAACATTAGAAGGAGCGG
GGATCCGAATCGCGAATCCCTGGTTcgagacgctgacgcctttgaccact
tagCCATCACTCCATAATTGCTCTATTTTGACTGACCATTTGATACAATG
GTTTTTCGAAATGAACTTTCAATTGTAGTAACTGTATTTCTCTCAGCTTC
TTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAGGAACGATAAATATGA
TAGCAATTAGAAACTTTGGTAATCATATTTATGGGACTGTTGCTGTAAGG
TTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAACCTGTGTTAAATTTA
CTGTGTTAATTTTGTTGCGCaatctaaaatttttctctTGATTAATTTTT
AGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACA
GTCAAAATGTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCC
AAATCATACAACTATCTGGTAGGTTATTTTGTCAACAGTTTTTGTACGAC
TTTTTACACGTGAACTTATATTTTGTATGCCCGAACATAATTTTGTTCGC
TTACTATTTCTTTGGTGATAATTGCATTTAGGTATTGGGTAACCCTTAAA
ACCCTTCCTCTGCTTATACTAAAAAGTCCTgttcaatgtgaaaaagatgT
TGGACTTTGACTTGGTTTTCTTGAGTGTCTACATTGATCGAGCCTAGTGT
ATAACTTCatagagcccccccccccagcggttttcatgatggcgtgattg
gtGTGTGATCAGAGGAACCAACGTGATCATTatagaaaggaaatttaact
TGTGATTGTgtgatttgaaaggtgactgggGGCCTCTTCATACAGTTCAA
CTCCTGATTCAGACAAACATAGATTTTATATCATGATATTGCAATGCTCC
TAAGTAATTTAAAATggttttaaaagtgttttttgtTCACACGGTATCGG
TTTGCAGCACCTCATTTTACGAAGTTCtgatatttgttttttataagtaa
TCAAATGTAACTTATCATTCAGGACTAGGATTACCCCCAGTACCAAACAA
GATAGGATCGGCTTACATAGTTTTAACACGGGGAATTTCGGCTGTGTGAA
GCCATCAAAGTTCCATTTATAAAGTGCGAGATCCAGTTGAGAAAATctac
atattggaaaaggtcttTTCGGGGAAAATGTTTTGAAGTTTTGGGGGTTT
CTTTTCCTTGTAAGACTGATATGATAGTGACTAAAATTCAACGAATTTAA
CCCATGGGAAAATGAAAGTAACAAACATTTTTGGAGAACTCAAAGTCTGT
TAAAAAATTAGTATGCTCCAatatgatattttgaattttttcggTCAAGT
AAAAAAGGTCAGGGGGATTATTTTGGGGAATTACTTAAAAAATGCCATGC
AGTATTTGAAAGAGAAATTGCTTTATATGATATACTTTCTTAAACAAATA
CCTTTGCATCAATTATCGTGTTTAGATTAAAAAATTTGTGTGTACAGTAC
GTCaacattttgagaaattcaaaGTACACGATTtattagtctacacaata
gacagatacaggcttttaggccttactcttgttCTATAGGCACTgatata
ggcggccactagtgaaccccaccgggaattgcttattaataggtttaaac
ataatagacaacattcacaaaagatgtttatcaatagagattttaaataa
aagaatgtttaaaacacagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCACGATTTATTAACAGGACTAAACACGTCtctttgtttttaatgttt
atcTTGTTGTCGAAATCGGtgaatcatttttctttttgtatacACAGGGC
ATCCCCTCTCATTAATTTTCTCGTCTTTTTTGATCGAACTTGTATCATAT
AAGTGTTTATACGCTTGATGATTGAAATctatgtttaaagattttttact
gctgaaagtttaaaaaggaagtTTTTTAGGGAAGGctgtttaaggctttt
tgaggattttttaaaaaggtttttggGGATTTTGGAAACAAGCCTTAGAA
TTATTCAAAAATGTATGAAGCCTTCCCTATGGTAAGTGATATTTTGCTTT
GAATTCTTGAAATTATAATCTTAAATCTCTTTTTAGCAGGGGGGGTGTCG
GTACTAAAACccaagacatatatgagtactacaaggttttttgacgattt
ttgacataccctcacctaatttttgaaaaaggaattttagtacacatgta
ctgaaatttatttttacattttagcaTAGTGACCACCTAAATAAGGCTTA
TTTTGGAATTCGGTTCGAAGAATGTGGGTCTttggactttcaacaaaatg
ccAACTCTGGTTATTTAAGCTGTCAATGAACCTGATATATCTCTATCTAT
TCTAGATAAAGACTCAGAAACAGTCAAGACACTTTTGCCCTGCTCTACTT
TAGTTATTGCAAAGATTGATGGGTTATTTTTCACCTCTAATTTACAGAgg
aacctttttcctcagttgagataaaaatttcctattgaaatattaatggg
gatacaaattctattgttccaaggttaaaaacccagtggggatatgattt
tggagtgcaatttttacacatggaattttgagtggggatgaaatcaaagt
caatttcccagtagggctgaaattcaagggtattctaccaccggggacaa
aatttttgcttaatttgtgacacagggacgtatttaaatcttatatagag
agtttttattttttcattttgcctaaaatgctcAGTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagttaaatttcctaaaa
tttggtgatttttagtactcatgtattaaaatttttcttaaatttcttga
agacccccacctaatttgggattttagtacacatggtactaaaatgcttt
taggctttttttgtaataccaccacgtcactaaaagtcatgatgtctgaa
attttagtaccgacccccccccctctttttaGCTAAATTTATAGTTTTTC
ACACAAAGACtataagctctagtttagacggccgactttctgccctgtct
attctaattgttagagtaggcagaagtTGGGCAAAAAGTTGGCAGctaaa
gacattgcattgacgtcaaaagagggcgatgcattgactttagacggccc
actttatgcccactttgattcacaattagaatagacagggcaaaaagtgg
gctgtctaaactagagctaagctCGTCTGAAAGGGTAAAAGAAAATTGTC
AATACTTTGTATGTATTGTCAGTACCTGGTAACTTTCAGTTTCGGAAATT
TTCAATGTCATTATTAAGTATTCTACTCATTTTATCTTGAATTTGGTCAC
AACTTTCATTTAGTATTGGCGTCATAAATGAGGTATTATTTCCTTGAAAG
TTTGTGAGAGATCTATGGGCCTGTGTCAAAAAATGTTGCCTTTGAAGTAG
GTTTAAAGCATTTTGTACATTTACGACGAATCTTTGTTAAAAAACAATAG
Gccgcaaaattaaacaccttttttgacaacaaataatatgcccataactt
ttgatctagagaagttgggattTTGAtgcaatacacttttttgctcagtt
tgaagagttCTTACGTAGTATAGGTcttctttgattttgaagacccccaa
aaatcatgaattttctgacctttcaattttgtttggaaacgcaaaaaatc
gaaaattatgcAAAAACTGCAGTTTTTCAAggttggtaacattcaaattc
cgaatcagcaccctcaaattgaccaaaatcaatCATGAaaggacattttg
aaaaaaagtgaaacgttttggtGGCACTGCACTGGCCTACAAGTTTCCAT
TTCAATAGAGGGAAAGGTAATGATGTTTATCTCTAAGCAATTATAAATGA
ACGATCTTAAAGCAGTAAATTGCTTTTATAAATGGTTTTGAAATTAGCTA
ACCGCGTCTTCTGAAATGATTTCTATTAACTTAAATTAAGTTTTGGCTCC
TATGTCATATGATACGTTTCGTTTAAAAGAACATAGGCGGACAGTTTTAT
CATGAAATTTAAATTGATAGAGATATTGTTAAGTAATCTGGTCTATTGAA
AACAACTTTTTAGCGTTCATTATCTGTAGAAAATAGATTGTAATCAAAGT
CACAGCTTaggttgtctgtacacagacccgatatctacggctaatttcaa
aaattcatttccgtagacaaacgtgagatacactctggtacagagtacag
CTTAGGGATCTGGATATTACTTTTGCTTTTTGCGTTTTGTTCCTATTTCG
AATTTAATCAGGTATAGATATTCTGTGATTGAAATATCTCAATTCTGCCC
AATTTAGTAACTATTACTGCTACTTTAATCATATAGCTTTCGTGcttaat
atttttggaaaatagtttTGGAAGCCCTAGCGAATTTATTGTATTGTGTT
AGCATCTTGAAGACATGGTTTTATGGGATTTGATTGTCTCAATTCTGCTA
TAATTTAGTAAAAAATTTACTTCAATATACTTCACTCGTATAGCTTTTGT
GCTCAATGTTTTATGtaggaatacacgtttttttataagaacaaactata
taagaacataaggcttcactggccaaaatgttaagagcaagttaagaaca
ttttaaggctttgtggactcaaaaccacccaatttcttaggaaaatagtc
aaaattattcacaaaatggtcaaaataagaacatgttcagaacaatttta
ggcttaaaactcaaaaagttcagaacattcaaggcttcaaaaaatttgga
tgtttttataaaaaaaacgcgtAGTCCTGGTAACCCTAGCAAATTTACTT
GTATTTTCTCAATATCTTTACTttccttttctttatttttcatttatcac
atttttttttcagtcgCAAGACGATCAAGATGATATATATGATACACCAG
AAACTGAAGAAATAGGTTGGTGTATTTGTATTTAAAGTTCTTGACTAGCA
TAATTGAATGTCCAAGTTATTTTGTGACCAGCCAAAAGTATAGTTTTtta
ttctgtttgttttttttatacaaGTTCGTCAAAATTAGACGATATGTGGC
GACTAGGACAGAAATAATTTGATATTGAACGAAAACAACTATGATGATCA
GTTAATcatggaaaaattttaaaccccaGATCAAAATATTATTCAGGAAT
ATTATTACAGTCTTGGTCAACTTAATGTATACACCGAATGTCAAAGTTTG
AAACAGTCCATTTTTCATACTTTCGATTCAACTTTTACAGCTCGCCCACC
ACCTCTGCAACAGAAACCACAACGTCCAGGAGGGTACGCACGACAACCAC
AACACCAAACTCCAATACCACAACACCAATCTCCAATACCACAACACCAA
TCTCCAATACCACAACACCAATCTCCAGCAGCACACCAAGATAACTTCAA
TATGAGCAATAAACGCACACAAAACATTGATAAGCATCGTCAACAATCGT
TCGCTAATAGTCGAGCAATGTTCGAACAGAGATCAACTTCACCTCCACAA
CCAGCTATCAATCGATCAGCTAAACCACCTGTACAACAACGTCGAAGTGA
TTCTAACAATAACCCGCCCTTCGCTCCCAAACCCAATATTTCTAAGCGCC
CAACGATTCCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCCCCAACCG
ATCCAACTTCAAGAACCTCAACATTATGAAATGGATAACCAAAGCGAAGA
CTCGGGCTGCCATGAGGACTTTTACATTGAGCCGCATCAAGCCAAAAATG
CCGTCATACCCCACGAAGAAGAAACGTATGAGGTCACAGACGGGCCAACC
TCCCCGGTCGAAATCATATCCTCAAAACCTAAAGGCATGCCTGGTCAGCA
ATTCATTACACAACTAAATCGAATGACCTTAGAAAGATCTGCTCCCTCAC
TTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGACCTCTCGTACCGACC
CCAGATCAAGAAGAAACTTATGAAATCGCACCTGAGAACCCTCGTTCACC
ACCATTACCCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGCATCCCAT
CTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCAGTACCATCACCACCA
CCACAGGAAGAAGAAACCTATGAAGTGACGCCCGATCAAGCGCCCGCTTT
ACCACCCTCACATCCTTCCTCGAGAAAATCTTCAAGTACTTCGTCTATAG
GTaagtaaaagagaaaaaaatttgccaGCCTGGTGATCTTTCTGGTTACT
GTGAACATCACAGTTTGGTTTTTTCTGAAATTNAATTTGCCAACCTGGTG
ATCTTTCTGGTTACTGTGAACATCACAGTTtggttttttctgaaatttaa
cCTTGTGAGGACGGACAATTTTATCGCGTATGTCTCATCACATTTCTGAT
CATATAATGGAGAGCACGTATCCTCGTGTTATGTTCTAGCAGGTTACATC
TTTATATATGTGAAAAAGTAAGAATTTCTCTCcgactatattcactcagg
agatttgggtggcagagcagcatatgcatttcgtccttattgaGACTCAT
CCATCAGATATATATCTATCAGTGAATTGAGTTTCCTTCAAAAGAACTCC
TATCTTGTGATTTGATTGATTAAGCCTTCATCAAAAATATCCTGGATAAT
AATTGTGGCGTGCAACTTAGTGTCCGGTATCACAGCCTGCAGTTTCATTT
CTCGTCTAATTTGGaactagcctagttaactaagcctgtattcacaaggc
taggataCACCGCTAATGGCAATATAGcattttcggcgctttaaagattt
tttatatttacggattttatgtttgccttggaatactggtAATTCAGTTA
CAagttaccatcagatttatcctagtgactgaatcaaaccaGTTTAGATT
TCTAGGCTTATTTGGAGCTAGGTGGTAATAATATCTAAGCAGGTCATAAA
CTATTCGATTCATTCTACCATCATCTATCTTCTAATACCTACAGGGGAAT
CACCGAGAACGTCCATTAAAGACAGATTACCAAATCCTCGAGATAACATA
CAAGAAGATTATGAGATGATAACTCATAGCCAAAGACCGCCTCCTCAACT
TCCTATCTCTTCACGTCCATCTCCACCCCAACAAAGGCGCCCACCACCCT
CGTTAGAACCAAAAGGTAATGATCATTCTTCTCgttgaatttctttttgt
acTTGCAGGTGTGTAGCAACTTATTCACATTCTTTACCAAGTAGGATGTT
TAGGACATTCATTATATTCCAGATTTTTCCacgaaaaagttgattttgta
ttggaaatccaggagttacaaaaaacattttacctTAGAAATCCGCtatc
gtccaccccctgtatgctGTTTCTCAACAGCATTTCttcaactcaaaatt
tcagaaaaaaaacttttatccaCTGACATTggaattatttttctaaaatt
taaagtGAATTTTCGTGAGGGGTATTGAAACTCTAGAAACTATGATCATT
AATATTTTGGGGAATGAAAAATAGGATTCTGTTGATATGTTGATTCTTTG
TATACAAAGAGAAAACACAAGTTGACATGCATGATAtcgttaatattttt
ttgttgctttttaagGTCAAGAACCTGTATTACCTCGTAAgcataaatat
ttatatttcattattttgtaaGCTAAGTCGAGTCTTCATGGTCCCTTACt
tataaagattttgttttaaaaaaaaactacgaACGAGGGGGGGggattta
aaactttctgatagTTGGTCTTTTATTTTAGCTAGAAAACTTGAGCTTTT
GGAAGCCGAAGATAGTGATCTGATGACCCCTGATGCTGTATTGTGCTCCA
AAGAACTTAATATTTCCTTTTCAGCCaaacatattttcaatatatccttc
aaaatatttttcatttcagcgCGCAACGAGAAACCGCAACGCCTTTTACC
CTCGCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAAGTAAGT
CAACTCGTTATATGCACCATAGCAATGTCTTTCACGGACCCaacatctga
ttggttgaaattgacgtattgactgaatttaccaatcagctattggttcc
gtgatgtaatatcagaagacattgcaatggtgcatgtAATGAATAGGGTG
TGTTTATAATTGATTGGTATTTTAAAGACAGGGATATCAATACGCTAACG
AAGTTTTTTCTCTGTTGCCATCTTCTGCTCGAGAGAAAGATTCAAAGAAA
TTGTGTTTTATCTTTGAGACTTTCTGATCTGAAGGTACCAAACTTCACAC
TACTGATTGTATTATATGCTGCAATTAAAACCATTGTATAACAAAAACCC
TCGACACAAGATTACCTACGAACCAGATTTTGCCAATTCTTTGGGGCGCA
CATGGTttatacccagctggcacacaacgttgtttcaacgttcatctaac
gttatatggacgctgtgaacgttagataaacgtcgaaaaaacgttatgtg
ccagctggatAGTAAATACTCTTGAATGATAAGTGAGGGTAATAAATTGT
TGGCAATAGATAAATTGGAACATCATGTCTTGTTTCTTTTTCCATACAGT
GTCACAACCACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGTAAGCAA
AATACTGGGTTTTTGAAACTTTGCGTTTGTTCATGGTTCCTTTAGGTACG
ACATTTACATAGTTCAGGTGGAAAGCTTTCACGTAACTTTTCGCGAGGtt
gaaaattcgcgaaaattattAAATAAGTTTTCGTAAAATAAAAGGAGTAT
GGAAGTCTCTAAGCCATAACGACGTATAATTTGCTGAGATCACCatgttt
gaatgaaaaagactttgtagtattattttttgaaaaatacggAGTTAAAA
GACAGACCATGtcgtgattttctaaaaaagataatTTGTATGTCTTAAAC
GTAAAACTTTTGAGATAGATGATGAGTGGCCTAAATAATTATTGTCACGA
AGTAGAGCCTTTGCTGAGTACTTTTTCTGTCTCGTTTTTGATGCTCTAAG
GATGGTTACTTCCTCGACTTAATGACTATTACTGGGACTTAAACGTCCTT
AGAGATTTTGGAAATTTGGTCTATCAGAATGTTCCTCGTTCTTTTTTACC
CTAATTGAGTCCGGCTGTCCGGTGCGTTTTCTTTTTAATCGTTTTctttc
actgacctttatatatccctggaccaagttactcaagcaaaatattatga
tcggagtttttttgaaattggtacccgtgGAGAGGGCGCTAGATCTAGTT
TTGCTTGTACATTAATGATGTATCATCGTTTGTCGTAAGGCAAAGTctca
aacactacaatggcttctttgagggtaccaactttcaaaaacttcgatca
aaggtGGCGGATATTGCTTGGttcagggatatataaaggtcagtgttttC
TATACAAAAAAATGTAAGGTATCATTTTTATGCAATGAGATCTGCAATAT
CCATCTGTGTCTCTTACCCCCGTGACTTACTACCATTGCAGTCTACCTAC
ATTCAGTCTAAGCAACAGCTGGCTCGAAGATGTCAAGTGCGGACAAAGGA
AAACCAGCCTCGATATGGGTGCCATAAGTCCGAAATTATTTCGTCGTATA
AATGACCGTCGTTCAAGCTTATCTGCCGATGAAATTCAAGTCAATCACTC
AACTGCATGTGTCTTAGGGTAGGATGATATGATAAATCAACATtgactaa
aaaagaaaacatgacaCACAAAGAGACATGGCGTGACAGTTGAGTTCCGG
ACAAATATAATAGGCTTACTGTAATCCGTTTCCAGTACAGTGTGTCCCGA
ATAAAGTTATCAAGAAAATCTTGGCAAAATCAATCAACTCGTTGGCATAT
TACCGGGTGTGTCAGAAATAAGTTACcctttttgatttgatattgtaggc
TTTTCGCCTTTTCTgacaatttttaaaattgacattttaggtttttaaac
ataacttttgaacccatgaagtaaaattaaaaagtaatacaccaaatttt
aagttaggctttcctctgtATGATtcagaaacttttgaaaaacctCTCAA
CTACTGACaacaatattaaattaaaaaaggATAACTAATTTCTGGAACAC
CCGGTAGTTTAAAAAGATATTTCGATTCATTCCTAGAACAAACAACTAAA
TACAAGCCAGTTGTAAATCGTTAACCCTCATACTGTGATGGAGGATTTTT
CATATACTAAAAACTGACCTCTTGATTCGGGACATGCTGTAAATTGCATG
TTAACATGGAAATAACTGAACAATCAATGTTCATCAAGGATGTGAGACTT
TCAATAATGTTGAAACTGGTGACGGactaaaattctgaaaataaaatgca
aaaaaaaaaaatacattagTTTACNAGACTAaaattctgaagaaaaaaaa
tgcaaaaaaaaaaatacattagTTTACTTTCGACGAGTAGATTTGCTTCT
TTACTTGTTCGTGAAaataaatttcgcgaaattgaatgaaatggaaattt
ttaaagttttgttttcGACGTTTTGTAACTCCGAACGTTTTAGTTTTGGC
GAAAGCTTGACAtcttttggaccattttcagttgatttaaGGCCTTCTAG
GAAAATACATCAACGCGAAACGTTTCAAAATATTGACTTAATAATGGAAA
TAAATCGAGAAATTTGTCTCGCAGAATTGAACCTtgtgaaaattaatcca
attaaagcaCACTGACAAAGAACAGTTTAAACAATGAAATATTGATGATT
TTGACGAACATTACCTTAACATAACCAATGACATACGAAATATCGActtt
acaaaatagaaatactTAACCACTCATACGCGTACAAAGTTATTCTAAAT
GAGACCTTCAATCTGTTACTTTTTTATGGAATTGTTCATTTAATATTTTA
GCAAATTAATTATCAGACATTTTCTAGATACAGTTTTCCTTCCTTTTTGA
AACAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGATCG
AAGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCGTACA
AAAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACAAACG
CCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGAGCT
TGATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGGTGAGTA
CGTCTACGTTTAGGATACTGTTCGCCCCTTGAGGTACTCTGCACCAGaat
gtatctcacgtttatcgcttcgtagtacactctgtgcgcattgtctgttt
gataaaaaaattcccgtatggagacctctgcgatgaagtatgatttatat
aaatagcaacacttctctcgtcttctccccctctctcaccaacactccat
cgcagcggtcggtttgaaaaatctcaaatgagaaaaggcaatgacaacag
accctctacggcaatgaattttgaaattagtcgtagatactgggtctgtg
tacaggcAAACTTTGAGGGAGTCAAAGGTTATTTCTCTCTGCTACTCGAG
ATGTTCAATGGCTCGAACGATCACTGTCTACTTCTTGGTGTTTAAAGTTA
TTGTGACTTAAAAGTATTCCTAAAAGAAGCAAGGTGATTTTCCCCTGAAT
AAACCTTGACTAAAATTGGAAATTATGTTCATTTGAAACTCATATGAATC
CTTTTGTGTTTGTTATTTCGTAGTATTTTCAAGTCAATCTCGTTGAATTG
CCTGAAGGCTGCAAtacaacgctttttttataataatacactttataaga
atgtccatgataaaaatggccaaaaaattaaggataatgctaagaatatc
accatcatggaattttgctactcagctaagaatgacatttttagagcatt
ttcaattataaattgccaattacccccaagtaaggctcactcctttcaca
aaaatgccattttatgcttgagacgtatgtactaaatgtcaaatctagtc
tgaattaggattctaacctaagaataatgtaagaatattttaggatgatt
tttttaagaaaatccatgataaaatggatttacaccattcttatgaaAAT
AAGCGTGTATTTGAAGCACACATTTCAAGGTTTTCTAAAatcttttcttt
actttttaggATGGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGT
CCCATTTTCTATATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGT
AAGTGTCCGAAAAAGTTTAACAATCGCTATTAAATGCTTTTCATTGATGT
TAGGTGTATAATATTTTCTCAATGCAGAATTTCCTaatctaccttatcgg
ggaaaaaaatgtcggagttttatttaaaaaagatcttgtaaatcgacgtt
taaagcacttatttcggttaataaagatgtaaaaaatatagattttaatt
ttggttggggtttaaagaattgggtaaaagttttggtcgggtgataaaat
atcggggaaaaaattcgtagggggaaaatttcgtcaccccttcaaaattt
tcgtcacttccCCCCGACATTTTTCCCAGATAAGGTATAGCAACGTAGGC
AGAAATTTTCAAgatcaaaaattgaagaaaaagatttcgcgatttcttta
aaaacaataatTCTAAAGAGCAAAACtttatggaaaaaaatataaaaggt
AGAAATGTGTCCGTCCATATATTCTGTGAATTTTCTTACTTGATAGAAAC
TAGCCAAAATAggccaaaattacaaaattatctGCCTAAAAAGTATTGAA
CACAAACCGAAGATTAATTCTTTTCCATTTATAGGCTGCTTCAAAAAGAC
GGTAAAATGTACTTGGGAAGTTCTACTGAGGTAGGTCATTCATTAAACAC
TTATACATACTCGAAGTGACCGGGAAGGGACTCGGTGTCATCCTCCAAAT
AATGTTATATGCTATGTCATGCATGGTAACACGCTCCATATTGAGTAATA
TTAGCCATAAACTCtctggtacctaatagccgggggggggaggaggttgg
aaaaaatctcaaaacttaataagcggggcgttagaataaaaatgtcctag
gtggaaaattttcgaaaaattaattagtgggggggcggctattaggtacc
cgagagtaagccTTAATACAATCACAGTAGAATTTTCTTCTGCCTAAAAC
AGATTTTCACCTCTTAAAAACCATTTATTTATCAGTCATATTTTTGATCA
GCTAAGATGGATTAATGAGTTTCTCAATAACTTTTTATTCTGCTATCTTT
CAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAACGA
AATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATGGC
AATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatattttt
gggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTTTA
AATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTATT
TATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCACC
ATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTAAT
CTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaaat
agaaatctcttaggaattcctcgggggaattctattgtaatactcccgaa
acaattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTAAG
ATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATatagaag
aaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGGCC
GATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATATT
GAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTTTa
gtttagatttttttgttatgtaaatacgaatttgattatttttctaaata
attaTTGATAGATGAATAGGTTTTCTAATGGCggataattctttttttaa
atatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttcaa
atgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001328-exon-sc0000010-1491911889:140226..140254TCONS_00001328-exon-sc0000010-1491911889:140226..140254Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:140226..140254TCONS_00001328-exon-sc0000010-1510915933:140226..140254Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:140226..140254TCONS_00001328-exon-sc0000010-1575043694:140226..140254Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:140728..140843TCONS_00001328-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:140728..140843TCONS_00001328-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:140728..140843TCONS_00001328-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:145789..145840TCONS_00001328-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:145789..145840TCONS_00001328-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:145789..145840TCONS_00001328-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:146166..147125TCONS_00001328-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:146166..147125TCONS_00001328-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:146166..147125TCONS_00001328-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:147920..148090TCONS_00001328-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:147920..148090TCONS_00001328-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:147920..148090TCONS_00001328-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:148845..148919TCONS_00001328-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:148845..148919TCONS_00001328-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:148845..148919TCONS_00001328-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:149525..149567TCONS_00001328-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:149525..149567TCONS_00001328-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:149525..149567TCONS_00001328-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:151931..152168TCONS_00001328-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:151931..152168TCONS_00001328-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:151931..152168TCONS_00001328-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:153135..153223TCONS_00001328-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:153135..153223TCONS_00001328-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:153135..153223TCONS_00001328-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:153810..153855TCONS_00001328-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:153810..153855TCONS_00001328-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:153810..153855TCONS_00001328-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:154279..155140TCONS_00001328-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:154279..155140TCONS_00001328-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:154279..155140TCONS_00001328-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:140226..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000250611	7.68558e-07	0.00016268	0.00619826	0.0843709	2.75111e-05	2.28954e-07	9.77973e-07	0.809709	0.00180101	1.48441e-08	3.59672e-07	1.57573e-10	0	4.45652e-06	3.77785e-05	8.77463e-06	1.92742e-08	0	1.13384e-05	0.000657644	0.00242369	3.41601e-07	0.00608962	0	0	3.62544e-10	3.57087e-07	7.05671e-06	7.68802e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001328 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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