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TCONS_00001328 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001328
Unique NameTCONS_00001328
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2681

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001328 ID=TCONS_00001328|Name=TCONS_00001328|organism=Clytia hemisphaerica|type=transcript|length=2681bp
CGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGCCACCTCTTCAGCCAC
CGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAAC
AATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGtcgCA
AGACGATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGCTC
GCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGAGGGTACGCACGA
CAACCACAACACCAAACTCCAATACCACAACACCAATCTCCAATACCACA
ACACCAATCTCCAATACCACAACACCAATCTCCAGCAGCACACCAAGATA
ACTTCAATATGAGCAATAAACGCACACAAAACATTGATAAGCATCGTCAA
CAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAGATCAACTTCACC
TCCACAACCAGCTATCAATCGATCAGCTAAACCACCTGTACAACAACGTC
GAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAACCCAATATTTCT
AAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCC
CCAACCGATCCAACTTCAAGAACCTCAACATTATGAAATGGATAACCAAA
GCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAGCCGCATCAAGCC
AAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGAGGTCACAGACGG
GCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTAAAGGCATGCCTG
GTCAGCAATTCATTACACAACTAAATCGAATGACCTTAGAAAGATCTGCT
CCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGACCTCTCGT
ACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCACCTGAGAACCCTC
GTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGC
ATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCAGTACCATC
ACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGCCCGATCAAGCGC
CCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCTTCAAGTACTTCG
TCTATAGGGGAATCACCGAGAACGTCCATTAAAGACAGATTACCAAATCC
TCGAGATAACATACAAGAAGATTATGAGATGATAACTCATAGCCAAAGAC
CGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCACCCCAACAAAGG
CGCCCACCACCCTCGTTAGAACCAAAAGcgCGCAACGAGAAACCGCAACG
CCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAA
AAATGTCACAACCACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCA
AGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGA
TACTTGTCCTCAACCTACCATAGAACGTATACCATCGTACAAAAAGCAAA
CACAATCTGCAAATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCC
GCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAG
AGCGTGCgaaattaaattgaaccaaaacagaAGGgATGGTGACTTTGTGA
TACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCAC
GATAATGTTGTCCGCAATTTACAGCTGCTTCAAAAAGACGGTAAAATGTA
CTTGGGAAGTTCTACTGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGT
ATCATCAGAATAACGAAATCATACTCAACACTGGTGGTAAAGTGAAACTA
CTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTTATAAGgaagaa
aaacgaaaatatttttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGC
TTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGG
ACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACCGAAAATATGGG
ATCAACATTGATCACCATCATTGTTTTGGATCATTGCTTTTTTATTAACG
GAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGT
TCGGGGGTattaaaatagaaatctcttaggaattcctcgggggaattcta
ttgtaatactcccgaaacaattccacaatgcatcgcttttttagaaaaat
caaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAAAAGTCAGAACA
CTTACAGATatagaagaaaaaaagtattttttatgGGATATCTATGAAAG
ACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAAACTTGGTGATA
GAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAAT
TTCTTGTTGCTTTTTagtttagatttttttgttatgtaaatacgaatttg
attatttttctaaataattaTTGATAGATGAATAGGTTTTCTAATGGCgg
ataattctttttttaaatatttgtaATTATTGGTAActtaaatttacaga
aaaatatttttttcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:140226..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001328 ID=TCONS_00001328|Name=TCONS_00001328|organism=Clytia hemisphaerica|type=transcript|length=14915bp|location=Sequence derived from alignment at sc0000010:140226..155140+ (Clytia hemisphaerica)
CGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTAACAATCGAGTATTAT ATATGTCAAAGTATCGTACTCTAGAGATTCACTATTTCACGGCTCGACTA TTTATTCCTTAAAGATTAGAATGAATTGTACGGAACATTAGAAGGAGCGG GGATCCGAATCGCGAATCCCTGGTTcgagacgctgacgcctttgaccact tagCCATCACTCCATAATTGCTCTATTTTGACTGACCATTTGATACAATG GTTTTTCGAAATGAACTTTCAATTGTAGTAACTGTATTTCTCTCAGCTTC TTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAGGAACGATAAATATGA TAGCAATTAGAAACTTTGGTAATCATATTTATGGGACTGTTGCTGTAAGG TTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAACCTGTGTTAAATTTA CTGTGTTAATTTTGTTGCGCaatctaaaatttttctctTGATTAATTTTT AGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACA GTCAAAATGTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCC AAATCATACAACTATCTGGTAGGTTATTTTGTCAACAGTTTTTGTACGAC TTTTTACACGTGAACTTATATTTTGTATGCCCGAACATAATTTTGTTCGC TTACTATTTCTTTGGTGATAATTGCATTTAGGTATTGGGTAACCCTTAAA ACCCTTCCTCTGCTTATACTAAAAAGTCCTgttcaatgtgaaaaagatgT TGGACTTTGACTTGGTTTTCTTGAGTGTCTACATTGATCGAGCCTAGTGT ATAACTTCatagagcccccccccccagcggttttcatgatggcgtgattg gtGTGTGATCAGAGGAACCAACGTGATCATTatagaaaggaaatttaact TGTGATTGTgtgatttgaaaggtgactgggGGCCTCTTCATACAGTTCAA CTCCTGATTCAGACAAACATAGATTTTATATCATGATATTGCAATGCTCC TAAGTAATTTAAAATggttttaaaagtgttttttgtTCACACGGTATCGG TTTGCAGCACCTCATTTTACGAAGTTCtgatatttgttttttataagtaa TCAAATGTAACTTATCATTCAGGACTAGGATTACCCCCAGTACCAAACAA GATAGGATCGGCTTACATAGTTTTAACACGGGGAATTTCGGCTGTGTGAA GCCATCAAAGTTCCATTTATAAAGTGCGAGATCCAGTTGAGAAAATctac atattggaaaaggtcttTTCGGGGAAAATGTTTTGAAGTTTTGGGGGTTT CTTTTCCTTGTAAGACTGATATGATAGTGACTAAAATTCAACGAATTTAA CCCATGGGAAAATGAAAGTAACAAACATTTTTGGAGAACTCAAAGTCTGT TAAAAAATTAGTATGCTCCAatatgatattttgaattttttcggTCAAGT AAAAAAGGTCAGGGGGATTATTTTGGGGAATTACTTAAAAAATGCCATGC AGTATTTGAAAGAGAAATTGCTTTATATGATATACTTTCTTAAACAAATA CCTTTGCATCAATTATCGTGTTTAGATTAAAAAATTTGTGTGTACAGTAC GTCaacattttgagaaattcaaaGTACACGATTtattagtctacacaata gacagatacaggcttttaggccttactcttgttCTATAGGCACTgatata ggcggccactagtgaaccccaccgggaattgcttattaataggtttaaac ataatagacaacattcacaaaagatgtttatcaatagagattttaaataa aagaatgtttaaaacacagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCACGATTTATTAACAGGACTAAACACGTCtctttgtttttaatgttt atcTTGTTGTCGAAATCGGtgaatcatttttctttttgtatacACAGGGC ATCCCCTCTCATTAATTTTCTCGTCTTTTTTGATCGAACTTGTATCATAT AAGTGTTTATACGCTTGATGATTGAAATctatgtttaaagattttttact gctgaaagtttaaaaaggaagtTTTTTAGGGAAGGctgtttaaggctttt tgaggattttttaaaaaggtttttggGGATTTTGGAAACAAGCCTTAGAA TTATTCAAAAATGTATGAAGCCTTCCCTATGGTAAGTGATATTTTGCTTT GAATTCTTGAAATTATAATCTTAAATCTCTTTTTAGCAGGGGGGGTGTCG GTACTAAAACccaagacatatatgagtactacaaggttttttgacgattt ttgacataccctcacctaatttttgaaaaaggaattttagtacacatgta ctgaaatttatttttacattttagcaTAGTGACCACCTAAATAAGGCTTA TTTTGGAATTCGGTTCGAAGAATGTGGGTCTttggactttcaacaaaatg ccAACTCTGGTTATTTAAGCTGTCAATGAACCTGATATATCTCTATCTAT TCTAGATAAAGACTCAGAAACAGTCAAGACACTTTTGCCCTGCTCTACTT TAGTTATTGCAAAGATTGATGGGTTATTTTTCACCTCTAATTTACAGAgg aacctttttcctcagttgagataaaaatttcctattgaaatattaatggg gatacaaattctattgttccaaggttaaaaacccagtggggatatgattt tggagtgcaatttttacacatggaattttgagtggggatgaaatcaaagt caatttcccagtagggctgaaattcaagggtattctaccaccggggacaa aatttttgcttaatttgtgacacagggacgtatttaaatcttatatagag agtttttattttttcattttgcctaaaatgctcAGTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagttaaatttcctaaaa tttggtgatttttagtactcatgtattaaaatttttcttaaatttcttga agacccccacctaatttgggattttagtacacatggtactaaaatgcttt taggctttttttgtaataccaccacgtcactaaaagtcatgatgtctgaa attttagtaccgacccccccccctctttttaGCTAAATTTATAGTTTTTC ACACAAAGACtataagctctagtttagacggccgactttctgccctgtct attctaattgttagagtaggcagaagtTGGGCAAAAAGTTGGCAGctaaa gacattgcattgacgtcaaaagagggcgatgcattgactttagacggccc actttatgcccactttgattcacaattagaatagacagggcaaaaagtgg gctgtctaaactagagctaagctCGTCTGAAAGGGTAAAAGAAAATTGTC AATACTTTGTATGTATTGTCAGTACCTGGTAACTTTCAGTTTCGGAAATT TTCAATGTCATTATTAAGTATTCTACTCATTTTATCTTGAATTTGGTCAC AACTTTCATTTAGTATTGGCGTCATAAATGAGGTATTATTTCCTTGAAAG TTTGTGAGAGATCTATGGGCCTGTGTCAAAAAATGTTGCCTTTGAAGTAG GTTTAAAGCATTTTGTACATTTACGACGAATCTTTGTTAAAAAACAATAG Gccgcaaaattaaacaccttttttgacaacaaataatatgcccataactt ttgatctagagaagttgggattTTGAtgcaatacacttttttgctcagtt tgaagagttCTTACGTAGTATAGGTcttctttgattttgaagacccccaa aaatcatgaattttctgacctttcaattttgtttggaaacgcaaaaaatc gaaaattatgcAAAAACTGCAGTTTTTCAAggttggtaacattcaaattc cgaatcagcaccctcaaattgaccaaaatcaatCATGAaaggacattttg aaaaaaagtgaaacgttttggtGGCACTGCACTGGCCTACAAGTTTCCAT TTCAATAGAGGGAAAGGTAATGATGTTTATCTCTAAGCAATTATAAATGA ACGATCTTAAAGCAGTAAATTGCTTTTATAAATGGTTTTGAAATTAGCTA ACCGCGTCTTCTGAAATGATTTCTATTAACTTAAATTAAGTTTTGGCTCC TATGTCATATGATACGTTTCGTTTAAAAGAACATAGGCGGACAGTTTTAT CATGAAATTTAAATTGATAGAGATATTGTTAAGTAATCTGGTCTATTGAA AACAACTTTTTAGCGTTCATTATCTGTAGAAAATAGATTGTAATCAAAGT CACAGCTTaggttgtctgtacacagacccgatatctacggctaatttcaa aaattcatttccgtagacaaacgtgagatacactctggtacagagtacag CTTAGGGATCTGGATATTACTTTTGCTTTTTGCGTTTTGTTCCTATTTCG AATTTAATCAGGTATAGATATTCTGTGATTGAAATATCTCAATTCTGCCC AATTTAGTAACTATTACTGCTACTTTAATCATATAGCTTTCGTGcttaat atttttggaaaatagtttTGGAAGCCCTAGCGAATTTATTGTATTGTGTT AGCATCTTGAAGACATGGTTTTATGGGATTTGATTGTCTCAATTCTGCTA TAATTTAGTAAAAAATTTACTTCAATATACTTCACTCGTATAGCTTTTGT GCTCAATGTTTTATGtaggaatacacgtttttttataagaacaaactata taagaacataaggcttcactggccaaaatgttaagagcaagttaagaaca ttttaaggctttgtggactcaaaaccacccaatttcttaggaaaatagtc aaaattattcacaaaatggtcaaaataagaacatgttcagaacaatttta ggcttaaaactcaaaaagttcagaacattcaaggcttcaaaaaatttgga tgtttttataaaaaaaacgcgtAGTCCTGGTAACCCTAGCAAATTTACTT GTATTTTCTCAATATCTTTACTttccttttctttatttttcatttatcac atttttttttcagtcgCAAGACGATCAAGATGATATATATGATACACCAG AAACTGAAGAAATAGGTTGGTGTATTTGTATTTAAAGTTCTTGACTAGCA TAATTGAATGTCCAAGTTATTTTGTGACCAGCCAAAAGTATAGTTTTtta ttctgtttgttttttttatacaaGTTCGTCAAAATTAGACGATATGTGGC GACTAGGACAGAAATAATTTGATATTGAACGAAAACAACTATGATGATCA GTTAATcatggaaaaattttaaaccccaGATCAAAATATTATTCAGGAAT ATTATTACAGTCTTGGTCAACTTAATGTATACACCGAATGTCAAAGTTTG AAACAGTCCATTTTTCATACTTTCGATTCAACTTTTACAGCTCGCCCACC ACCTCTGCAACAGAAACCACAACGTCCAGGAGGGTACGCACGACAACCAC AACACCAAACTCCAATACCACAACACCAATCTCCAATACCACAACACCAA TCTCCAATACCACAACACCAATCTCCAGCAGCACACCAAGATAACTTCAA TATGAGCAATAAACGCACACAAAACATTGATAAGCATCGTCAACAATCGT TCGCTAATAGTCGAGCAATGTTCGAACAGAGATCAACTTCACCTCCACAA CCAGCTATCAATCGATCAGCTAAACCACCTGTACAACAACGTCGAAGTGA TTCTAACAATAACCCGCCCTTCGCTCCCAAACCCAATATTTCTAAGCGCC CAACGATTCCAACGCCAGCAGCGCAACAAAGGGTGGTACCGCCCCAACCG ATCCAACTTCAAGAACCTCAACATTATGAAATGGATAACCAAAGCGAAGA CTCGGGCTGCCATGAGGACTTTTACATTGAGCCGCATCAAGCCAAAAATG CCGTCATACCCCACGAAGAAGAAACGTATGAGGTCACAGACGGGCCAACC TCCCCGGTCGAAATCATATCCTCAAAACCTAAAGGCATGCCTGGTCAGCA ATTCATTACACAACTAAATCGAATGACCTTAGAAAGATCTGCTCCCTCAC TTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGACCTCTCGTACCGACC CCAGATCAAGAAGAAACTTATGAAATCGCACCTGAGAACCCTCGTTCACC ACCATTACCCGGTAACCACCCTTCAGCCGCAAAAAGCCCCGGCATCCCAT CTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCAGTACCATCACCACCA CCACAGGAAGAAGAAACCTATGAAGTGACGCCCGATCAAGCGCCCGCTTT ACCACCCTCACATCCTTCCTCGAGAAAATCTTCAAGTACTTCGTCTATAG GTaagtaaaagagaaaaaaatttgccaGCCTGGTGATCTTTCTGGTTACT GTGAACATCACAGTTTGGTTTTTTCTGAAATTNAATTTGCCAACCTGGTG ATCTTTCTGGTTACTGTGAACATCACAGTTtggttttttctgaaatttaa cCTTGTGAGGACGGACAATTTTATCGCGTATGTCTCATCACATTTCTGAT CATATAATGGAGAGCACGTATCCTCGTGTTATGTTCTAGCAGGTTACATC TTTATATATGTGAAAAAGTAAGAATTTCTCTCcgactatattcactcagg agatttgggtggcagagcagcatatgcatttcgtccttattgaGACTCAT CCATCAGATATATATCTATCAGTGAATTGAGTTTCCTTCAAAAGAACTCC TATCTTGTGATTTGATTGATTAAGCCTTCATCAAAAATATCCTGGATAAT AATTGTGGCGTGCAACTTAGTGTCCGGTATCACAGCCTGCAGTTTCATTT CTCGTCTAATTTGGaactagcctagttaactaagcctgtattcacaaggc taggataCACCGCTAATGGCAATATAGcattttcggcgctttaaagattt tttatatttacggattttatgtttgccttggaatactggtAATTCAGTTA CAagttaccatcagatttatcctagtgactgaatcaaaccaGTTTAGATT TCTAGGCTTATTTGGAGCTAGGTGGTAATAATATCTAAGCAGGTCATAAA CTATTCGATTCATTCTACCATCATCTATCTTCTAATACCTACAGGGGAAT CACCGAGAACGTCCATTAAAGACAGATTACCAAATCCTCGAGATAACATA CAAGAAGATTATGAGATGATAACTCATAGCCAAAGACCGCCTCCTCAACT TCCTATCTCTTCACGTCCATCTCCACCCCAACAAAGGCGCCCACCACCCT CGTTAGAACCAAAAGGTAATGATCATTCTTCTCgttgaatttctttttgt acTTGCAGGTGTGTAGCAACTTATTCACATTCTTTACCAAGTAGGATGTT TAGGACATTCATTATATTCCAGATTTTTCCacgaaaaagttgattttgta ttggaaatccaggagttacaaaaaacattttacctTAGAAATCCGCtatc gtccaccccctgtatgctGTTTCTCAACAGCATTTCttcaactcaaaatt tcagaaaaaaaacttttatccaCTGACATTggaattatttttctaaaatt taaagtGAATTTTCGTGAGGGGTATTGAAACTCTAGAAACTATGATCATT AATATTTTGGGGAATGAAAAATAGGATTCTGTTGATATGTTGATTCTTTG TATACAAAGAGAAAACACAAGTTGACATGCATGATAtcgttaatattttt ttgttgctttttaagGTCAAGAACCTGTATTACCTCGTAAgcataaatat ttatatttcattattttgtaaGCTAAGTCGAGTCTTCATGGTCCCTTACt tataaagattttgttttaaaaaaaaactacgaACGAGGGGGGGggattta aaactttctgatagTTGGTCTTTTATTTTAGCTAGAAAACTTGAGCTTTT GGAAGCCGAAGATAGTGATCTGATGACCCCTGATGCTGTATTGTGCTCCA AAGAACTTAATATTTCCTTTTCAGCCaaacatattttcaatatatccttc aaaatatttttcatttcagcgCGCAACGAGAAACCGCAACGCCTTTTACC CTCGCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAAGTAAGT CAACTCGTTATATGCACCATAGCAATGTCTTTCACGGACCCaacatctga ttggttgaaattgacgtattgactgaatttaccaatcagctattggttcc gtgatgtaatatcagaagacattgcaatggtgcatgtAATGAATAGGGTG TGTTTATAATTGATTGGTATTTTAAAGACAGGGATATCAATACGCTAACG AAGTTTTTTCTCTGTTGCCATCTTCTGCTCGAGAGAAAGATTCAAAGAAA TTGTGTTTTATCTTTGAGACTTTCTGATCTGAAGGTACCAAACTTCACAC TACTGATTGTATTATATGCTGCAATTAAAACCATTGTATAACAAAAACCC TCGACACAAGATTACCTACGAACCAGATTTTGCCAATTCTTTGGGGCGCA CATGGTttatacccagctggcacacaacgttgtttcaacgttcatctaac gttatatggacgctgtgaacgttagataaacgtcgaaaaaacgttatgtg ccagctggatAGTAAATACTCTTGAATGATAAGTGAGGGTAATAAATTGT TGGCAATAGATAAATTGGAACATCATGTCTTGTTTCTTTTTCCATACAGT GTCACAACCACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGTAAGCAA AATACTGGGTTTTTGAAACTTTGCGTTTGTTCATGGTTCCTTTAGGTACG ACATTTACATAGTTCAGGTGGAAAGCTTTCACGTAACTTTTCGCGAGGtt gaaaattcgcgaaaattattAAATAAGTTTTCGTAAAATAAAAGGAGTAT GGAAGTCTCTAAGCCATAACGACGTATAATTTGCTGAGATCACCatgttt gaatgaaaaagactttgtagtattattttttgaaaaatacggAGTTAAAA GACAGACCATGtcgtgattttctaaaaaagataatTTGTATGTCTTAAAC GTAAAACTTTTGAGATAGATGATGAGTGGCCTAAATAATTATTGTCACGA AGTAGAGCCTTTGCTGAGTACTTTTTCTGTCTCGTTTTTGATGCTCTAAG GATGGTTACTTCCTCGACTTAATGACTATTACTGGGACTTAAACGTCCTT AGAGATTTTGGAAATTTGGTCTATCAGAATGTTCCTCGTTCTTTTTTACC CTAATTGAGTCCGGCTGTCCGGTGCGTTTTCTTTTTAATCGTTTTctttc actgacctttatatatccctggaccaagttactcaagcaaaatattatga tcggagtttttttgaaattggtacccgtgGAGAGGGCGCTAGATCTAGTT TTGCTTGTACATTAATGATGTATCATCGTTTGTCGTAAGGCAAAGTctca aacactacaatggcttctttgagggtaccaactttcaaaaacttcgatca aaggtGGCGGATATTGCTTGGttcagggatatataaaggtcagtgttttC TATACAAAAAAATGTAAGGTATCATTTTTATGCAATGAGATCTGCAATAT CCATCTGTGTCTCTTACCCCCGTGACTTACTACCATTGCAGTCTACCTAC ATTCAGTCTAAGCAACAGCTGGCTCGAAGATGTCAAGTGCGGACAAAGGA AAACCAGCCTCGATATGGGTGCCATAAGTCCGAAATTATTTCGTCGTATA AATGACCGTCGTTCAAGCTTATCTGCCGATGAAATTCAAGTCAATCACTC AACTGCATGTGTCTTAGGGTAGGATGATATGATAAATCAACATtgactaa aaaagaaaacatgacaCACAAAGAGACATGGCGTGACAGTTGAGTTCCGG ACAAATATAATAGGCTTACTGTAATCCGTTTCCAGTACAGTGTGTCCCGA ATAAAGTTATCAAGAAAATCTTGGCAAAATCAATCAACTCGTTGGCATAT TACCGGGTGTGTCAGAAATAAGTTACcctttttgatttgatattgtaggc TTTTCGCCTTTTCTgacaatttttaaaattgacattttaggtttttaaac ataacttttgaacccatgaagtaaaattaaaaagtaatacaccaaatttt aagttaggctttcctctgtATGATtcagaaacttttgaaaaacctCTCAA CTACTGACaacaatattaaattaaaaaaggATAACTAATTTCTGGAACAC CCGGTAGTTTAAAAAGATATTTCGATTCATTCCTAGAACAAACAACTAAA TACAAGCCAGTTGTAAATCGTTAACCCTCATACTGTGATGGAGGATTTTT CATATACTAAAAACTGACCTCTTGATTCGGGACATGCTGTAAATTGCATG TTAACATGGAAATAACTGAACAATCAATGTTCATCAAGGATGTGAGACTT TCAATAATGTTGAAACTGGTGACGGactaaaattctgaaaataaaatgca aaaaaaaaaaatacattagTTTACNAGACTAaaattctgaagaaaaaaaa tgcaaaaaaaaaaatacattagTTTACTTTCGACGAGTAGATTTGCTTCT TTACTTGTTCGTGAAaataaatttcgcgaaattgaatgaaatggaaattt ttaaagttttgttttcGACGTTTTGTAACTCCGAACGTTTTAGTTTTGGC GAAAGCTTGACAtcttttggaccattttcagttgatttaaGGCCTTCTAG GAAAATACATCAACGCGAAACGTTTCAAAATATTGACTTAATAATGGAAA TAAATCGAGAAATTTGTCTCGCAGAATTGAACCTtgtgaaaattaatcca attaaagcaCACTGACAAAGAACAGTTTAAACAATGAAATATTGATGATT TTGACGAACATTACCTTAACATAACCAATGACATACGAAATATCGActtt acaaaatagaaatactTAACCACTCATACGCGTACAAAGTTATTCTAAAT GAGACCTTCAATCTGTTACTTTTTTATGGAATTGTTCATTTAATATTTTA GCAAATTAATTATCAGACATTTTCTAGATACAGTTTTCCTTCCTTTTTGA AACAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGATCG AAGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCGTACA AAAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACAAACG CCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGAGCT TGATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGGTGAGTA CGTCTACGTTTAGGATACTGTTCGCCCCTTGAGGTACTCTGCACCAGaat gtatctcacgtttatcgcttcgtagtacactctgtgcgcattgtctgttt gataaaaaaattcccgtatggagacctctgcgatgaagtatgatttatat aaatagcaacacttctctcgtcttctccccctctctcaccaacactccat cgcagcggtcggtttgaaaaatctcaaatgagaaaaggcaatgacaacag accctctacggcaatgaattttgaaattagtcgtagatactgggtctgtg tacaggcAAACTTTGAGGGAGTCAAAGGTTATTTCTCTCTGCTACTCGAG ATGTTCAATGGCTCGAACGATCACTGTCTACTTCTTGGTGTTTAAAGTTA TTGTGACTTAAAAGTATTCCTAAAAGAAGCAAGGTGATTTTCCCCTGAAT AAACCTTGACTAAAATTGGAAATTATGTTCATTTGAAACTCATATGAATC CTTTTGTGTTTGTTATTTCGTAGTATTTTCAAGTCAATCTCGTTGAATTG CCTGAAGGCTGCAAtacaacgctttttttataataatacactttataaga atgtccatgataaaaatggccaaaaaattaaggataatgctaagaatatc accatcatggaattttgctactcagctaagaatgacatttttagagcatt ttcaattataaattgccaattacccccaagtaaggctcactcctttcaca aaaatgccattttatgcttgagacgtatgtactaaatgtcaaatctagtc tgaattaggattctaacctaagaataatgtaagaatattttaggatgatt tttttaagaaaatccatgataaaatggatttacaccattcttatgaaAAT AAGCGTGTATTTGAAGCACACATTTCAAGGTTTTCTAAAatcttttcttt actttttaggATGGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGT CCCATTTTCTATATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGT AAGTGTCCGAAAAAGTTTAACAATCGCTATTAAATGCTTTTCATTGATGT TAGGTGTATAATATTTTCTCAATGCAGAATTTCCTaatctaccttatcgg ggaaaaaaatgtcggagttttatttaaaaaagatcttgtaaatcgacgtt taaagcacttatttcggttaataaagatgtaaaaaatatagattttaatt ttggttggggtttaaagaattgggtaaaagttttggtcgggtgataaaat atcggggaaaaaattcgtagggggaaaatttcgtcaccccttcaaaattt tcgtcacttccCCCCGACATTTTTCCCAGATAAGGTATAGCAACGTAGGC AGAAATTTTCAAgatcaaaaattgaagaaaaagatttcgcgatttcttta aaaacaataatTCTAAAGAGCAAAACtttatggaaaaaaatataaaaggt AGAAATGTGTCCGTCCATATATTCTGTGAATTTTCTTACTTGATAGAAAC TAGCCAAAATAggccaaaattacaaaattatctGCCTAAAAAGTATTGAA CACAAACCGAAGATTAATTCTTTTCCATTTATAGGCTGCTTCAAAAAGAC GGTAAAATGTACTTGGGAAGTTCTACTGAGGTAGGTCATTCATTAAACAC TTATACATACTCGAAGTGACCGGGAAGGGACTCGGTGTCATCCTCCAAAT AATGTTATATGCTATGTCATGCATGGTAACACGCTCCATATTGAGTAATA TTAGCCATAAACTCtctggtacctaatagccgggggggggaggaggttgg aaaaaatctcaaaacttaataagcggggcgttagaataaaaatgtcctag gtggaaaattttcgaaaaattaattagtgggggggcggctattaggtacc cgagagtaagccTTAATACAATCACAGTAGAATTTTCTTCTGCCTAAAAC AGATTTTCACCTCTTAAAAACCATTTATTTATCAGTCATATTTTTGATCA GCTAAGATGGATTAATGAGTTTCTCAATAACTTTTTATTCTGCTATCTTT CAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAACGA AATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATGGC AATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatattttt gggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTTTA AATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTATT TATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCACC ATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTAAT CTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaaat agaaatctcttaggaattcctcgggggaattctattgtaatactcccgaa acaattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTAAG ATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATatagaag aaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGGCC GATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATATT GAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTTTa gtttagatttttttgttatgtaaatacgaatttgattatttttctaaata attaTTGATAGATGAATAGGTTTTCTAATGGCggataattctttttttaa atatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttcaa atgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001328-exon-sc0000010-1491911889:140226..140254TCONS_00001328-exon-sc0000010-1491911889:140226..140254Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:140226..140254TCONS_00001328-exon-sc0000010-1510915933:140226..140254Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:140226..140254TCONS_00001328-exon-sc0000010-1575043694:140226..140254Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:140728..140843TCONS_00001328-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:140728..140843TCONS_00001328-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:140728..140843TCONS_00001328-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:145789..145840TCONS_00001328-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:145789..145840TCONS_00001328-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:145789..145840TCONS_00001328-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:146166..147125TCONS_00001328-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:146166..147125TCONS_00001328-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:146166..147125TCONS_00001328-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:147920..148090TCONS_00001328-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:147920..148090TCONS_00001328-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:147920..148090TCONS_00001328-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:148845..148919TCONS_00001328-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:148845..148919TCONS_00001328-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:148845..148919TCONS_00001328-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:149525..149567TCONS_00001328-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:149525..149567TCONS_00001328-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:149525..149567TCONS_00001328-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:151931..152168TCONS_00001328-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:151931..152168TCONS_00001328-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:151931..152168TCONS_00001328-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:153135..153223TCONS_00001328-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:153135..153223TCONS_00001328-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:153135..153223TCONS_00001328-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:153810..153855TCONS_00001328-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:153810..153855TCONS_00001328-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:153810..153855TCONS_00001328-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1491911889:154279..155140TCONS_00001328-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1510915933:154279..155140TCONS_00001328-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001328-exon-sc0000010-1575043694:154279..155140TCONS_00001328-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:140226..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000250611 7.68558e-07 0.00016268 0.00619826 0.0843709 2.75111e-05 2.28954e-07 9.77973e-07 0.809709 0.00180101 1.48441e-08 3.59672e-07 1.57573e-10 0 4.45652e-06 3.77785e-05 8.77463e-06 1.92742e-08 0 1.13384e-05 0.000657644 0.00242369 3.41601e-07 0.00608962 0 0 3.62544e-10 3.57087e-07 7.05671e-06 7.68802e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001328 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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