Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

TCONS_00001326 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001326
Unique NameTCONS_00001326
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2717

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001326 ID=TCONS_00001326|Name=TCONS_00001326|organism=Clytia hemisphaerica|type=transcript|length=2717bp
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGC
CACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAAT
GTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATA
CAACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAA
CTGAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCA
GGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCA
ATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAG
CAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATT
GATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACA
GAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCAC
CTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCC
AAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACA
AAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATG
AAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATT
GAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTA
TGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAAC
CTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACC
TTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGC
TGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCG
CACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCC
GCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACC
AATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGA
CGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAA
TCTTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGA
CAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAA
CTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCT
CCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTCAAGA
ACCTGTATTACCTCcgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGC
CTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAACCA
CAAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCTTT
CCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAAC
CTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAAT
GCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATC
TGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaatta
aattgaaccaaaacagaAGGgATGGTGACTTTGTGATACGAAACTCATCC
AAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTGTCCG
CAATTTACAGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTA
CTGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAAC
GAAATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATG
GCAATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatattt
ttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTT
TAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTA
TTTATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCA
CCATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTA
ATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaa
atagaaatctcttaggaattcctcgggggaattctattgtaatactcccg
aaacaattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTA
AGATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATataga
agaaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGG
CCGATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATA
TTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTT
Tagtttagatttttttgttatgtaaatacgaatttgattatttttctaaa
taattaTTGATAGATGAATAGGTTTTCTAATGGCggataattcttttttt
aaatatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttc
aaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:140211..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001326 ID=TCONS_00001326|Name=TCONS_00001326|organism=Clytia hemisphaerica|type=transcript|length=14930bp|location=Sequence derived from alignment at sc0000010:140211..155140+ (Clytia hemisphaerica)
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTA ACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTAT TTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAA CATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctg acgcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGA CCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGT ATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAG GAACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGG ACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAA CCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttc tctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCAC CACCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGAT AGCATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAA CAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAA CATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTAT TGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttca atgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATT GATCGAGCCTAGTGTATAACTTCatagagcccccccccccagcggttttc atgatggcgtgattggtGTGTGATCAGAGGAACCAACGTGATCATTatag aaaggaaatttaactTGTGATTGTgtgatttgaaaggtgactgggGGCCT CTTCATACAGTTCAACTCCTGATTCAGACAAACATAGATTTTATATCATG ATATTGCAATGCTCCTAAGTAATTTAAAATggttttaaaagtgttttttg tTCACACGGTATCGGTTTGCAGCACCTCATTTTACGAAGTTCtgatattt gttttttataagtaaTCAAATGTAACTTATCATTCAGGACTAGGATTACC CCCAGTACCAAACAAGATAGGATCGGCTTACATAGTTTTAACACGGGGAA TTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATAAAGTGCGAGATCCA GTTGAGAAAATctacatattggaaaaggtcttTTCGGGGAAAATGTTTTG AAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATATGATAGTGACTAAA ATTCAACGAATTTAACCCATGGGAAAATGAAAGTAACAAACATTTTTGGA GAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAatatgatattttgaa ttttttcggTCAAGTAAAAAAGGTCAGGGGGATTATTTTGGGGAATTACT TAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGCTTTATATGATATAC TTTCTTAAACAAATACCTTTGCATCAATTATCGTGTTTAGATTAAAAAAT TTGTGTGTACAGTACGTCaacattttgagaaattcaaaGTACACGATTta ttagtctacacaatagacagatacaggcttttaggccttactcttgttCT ATAGGCACTgatataggcggccactagtgaaccccaccgggaattgctta ttaataggtttaaacataatagacaacattcacaaaagatgtttatcaat agagattttaaataaaagaatgtttaaaacacagNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGACTAAACACGTCtct ttgtttttaatgtttatcTTGTTGTCGAAATCGGtgaatcatttttcttt ttgtatacACAGGGCATCCCCTCTCATTAATTTTCTCGTCTTTTTTGATC GAACTTGTATCATATAAGTGTTTATACGCTTGATGATTGAAATctatgtt taaagattttttactgctgaaagtttaaaaaggaagtTTTTTAGGGAAGG ctgtttaaggctttttgaggattttttaaaaaggtttttggGGATTTTGG AAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCTTCCCTATGGTAA GTGATATTTTGCTTTGAATTCTTGAAATTATAATCTTAAATCTCTTTTTA GCAGGGGGGGTGTCGGTACTAAAACccaagacatatatgagtactacaag gttttttgacgatttttgacataccctcacctaatttttgaaaaaggaat tttagtacacatgtactgaaatttatttttacattttagcaTAGTGACCA CCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGAATGTGGGTCTttgg actttcaacaaaatgccAACTCTGGTTATTTAAGCTGTCAATGAACCTGA TATATCTCTATCTATTCTAGATAAAGACTCAGAAACAGTCAAGACACTTT TGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATGGGTTATTTTTCACC TCTAATTTACAGAggaacctttttcctcagttgagataaaaatttcctat tgaaatattaatggggatacaaattctattgttccaaggttaaaaaccca gtggggatatgattttggagtgcaatttttacacatggaattttgagtgg ggatgaaatcaaagtcaatttcccagtagggctgaaattcaagggtattc taccaccggggacaaaatttttgcttaatttgtgacacagggacgtattt aaatcttatatagagagtttttattttttcattttgcctaaaatgctcAG TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtag ttaaatttcctaaaatttggtgatttttagtactcatgtattaaaatttt tcttaaatttcttgaagacccccacctaatttgggattttagtacacatg gtactaaaatgcttttaggctttttttgtaataccaccacgtcactaaaa gtcatgatgtctgaaattttagtaccgacccccccccctctttttaGCTA AATTTATAGTTTTTCACACAAAGACtataagctctagtttagacggccga ctttctgccctgtctattctaattgttagagtaggcagaagtTGGGCAAA AAGTTGGCAGctaaagacattgcattgacgtcaaaagagggcgatgcatt gactttagacggcccactttatgcccactttgattcacaattagaataga cagggcaaaaagtgggctgtctaaactagagctaagctCGTCTGAAAGGG TAAAAGAAAATTGTCAATACTTTGTATGTATTGTCAGTACCTGGTAACTT TCAGTTTCGGAAATTTTCAATGTCATTATTAAGTATTCTACTCATTTTAT CTTGAATTTGGTCACAACTTTCATTTAGTATTGGCGTCATAAATGAGGTA TTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCCTGTGTCAAAAAATG TTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATTTACGACGAATCTTT GTTAAAAAACAATAGGccgcaaaattaaacaccttttttgacaacaaata atatgcccataacttttgatctagagaagttgggattTTGAtgcaataca cttttttgctcagtttgaagagttCTTACGTAGTATAGGTcttctttgat tttgaagacccccaaaaatcatgaattttctgacctttcaattttgtttg gaaacgcaaaaaatcgaaaattatgcAAAAACTGCAGTTTTTCAAggttg gtaacattcaaattccgaatcagcaccctcaaattgaccaaaatcaatCA TGAaaggacattttgaaaaaaagtgaaacgttttggtGGCACTGCACTGG CCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAATGATGTTTATCTCTA AGCAATTATAAATGAACGATCTTAAAGCAGTAAATTGCTTTTATAAATGG TTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATTTCTATTAACTTAAA TTAAGTTTTGGCTCCTATGTCATATGATACGTTTCGTTTAAAAGAACATA GGCGGACAGTTTTATCATGAAATTTAAATTGATAGAGATATTGTTAAGTA ATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATTATCTGTAGAAAATA GATTGTAATCAAAGTCACAGCTTaggttgtctgtacacagacccgatatc tacggctaatttcaaaaattcatttccgtagacaaacgtgagatacactc tggtacagagtacagCTTAGGGATCTGGATATTACTTTTGCTTTTTGCGT TTTGTTCCTATTTCGAATTTAATCAGGTATAGATATTCTGTGATTGAAAT ATCTCAATTCTGCCCAATTTAGTAACTATTACTGCTACTTTAATCATATA GCTTTCGTGcttaatatttttggaaaatagtttTGGAAGCCCTAGCGAAT TTATTGTATTGTGTTAGCATCTTGAAGACATGGTTTTATGGGATTTGATT GTCTCAATTCTGCTATAATTTAGTAAAAAATTTACTTCAATATACTTCAC TCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaatacacgttttttta taagaacaaactatataagaacataaggcttcactggccaaaatgttaag agcaagttaagaacattttaaggctttgtggactcaaaaccacccaattt cttaggaaaatagtcaaaattattcacaaaatggtcaaaataagaacatg ttcagaacaattttaggcttaaaactcaaaaagttcagaacattcaaggc ttcaaaaaatttggatgtttttataaaaaaaacgcgtAGTCCTGGTAACC CTAGCAAATTTACTTGTATTTTCTCAATATCTTTACTttccttttcttta tttttcatttatcacatttttttttcagtcgCAAGACGATCAAGATGATA TATATGATACACCAGAAACTGAAGAAATAGGTTGGTGTATTTGTATTTAA AGTTCTTGACTAGCATAATTGAATGTCCAAGTTATTTTGTGACCAGCCAA AAGTATAGTTTTttattctgtttgttttttttatacaaGTTCGTCAAAAT TAGACGATATGTGGCGACTAGGACAGAAATAATTTGATATTGAACGAAAA CAACTATGATGATCAGTTAATcatggaaaaattttaaaccccaGATCAAA ATATTATTCAGGAATATTATTACAGTCTTGGTCAACTTAATGTATACACC GAATGTCAAAGTTTGAAACAGTCCATTTTTCATACTTTCGATTCAACTTT TACAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGAGGGT ACGCACGACAACCACAACACCAAACTCCAATACCACAACACCAATCTCCA ATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAGCAGCACA CCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATTGATAAGC ATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAGATCA ACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCACCTGTACA ACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAACCCA ATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAGGGTG GTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATGAAATGGA TAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAGCCGC ATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGAGGTC ACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTAAAGG CATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACCTTAGAAA GATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGA CCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCACCTGA GAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCAAAAA GCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCA GTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGCCCGA TCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCTTCAA GTACTTCGTCTATAGGTaagtaaaagagaaaaaaatttgccaGCCTGGTG ATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTTTTTCTGAAATTNAA TTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTtggtt ttttctgaaatttaacCTTGTGAGGACGGACAATTTTATCGCGTATGTCT CATCACATTTCTGATCATATAATGGAGAGCACGTATCCTCGTGTTATGTT CTAGCAGGTTACATCTTTATATATGTGAAAAAGTAAGAATTTCTCTCcga ctatattcactcaggagatttgggtggcagagcagcatatgcatttcgtc cttattgaGACTCATCCATCAGATATATATCTATCAGTGAATTGAGTTTC CTTCAAAAGAACTCCTATCTTGTGATTTGATTGATTAAGCCTTCATCAAA AATATCCTGGATAATAATTGTGGCGTGCAACTTAGTGTCCGGTATCACAG CCTGCAGTTTCATTTCTCGTCTAATTTGGaactagcctagttaactaagc ctgtattcacaaggctaggataCACCGCTAATGGCAATATAGcattttcg gcgctttaaagattttttatatttacggattttatgtttgccttggaata ctggtAATTCAGTTACAagttaccatcagatttatcctagtgactgaatc aaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAGGTGGTAATAATATC TAAGCAGGTCATAAACTATTCGATTCATTCTACCATCATCTATCTTCTAA TACCTACAGGGGAATCACCGAGAACGTCCATTAAAGACAGATTACCAAAT CCTCGAGATAACATACAAGAAGATTATGAGATGATAACTCATAGCCAAAG ACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCACCCCAACAAA GGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATGATCATTCTTCTCgt tgaatttctttttgtacTTGCAGGTGTGTAGCAACTTATTCACATTCTTT ACCAAGTAGGATGTTTAGGACATTCATTATATTCCAGATTTTTCCacgaa aaagttgattttgtattggaaatccaggagttacaaaaaacattttacct TAGAAATCCGCtatcgtccaccccctgtatgctGTTTCTCAACAGCATTT CttcaactcaaaatttcagaaaaaaaacttttatccaCTGACATTggaat tatttttctaaaatttaaagtGAATTTTCGTGAGGGGTATTGAAACTCTA GAAACTATGATCATTAATATTTTGGGGAATGAAAAATAGGATTCTGTTGA TATGTTGATTCTTTGTATACAAAGAGAAAACACAAGTTGACATGCATGAT AtcgttaatatttttttgttgctttttaagGTCAAGAACCTGTATTACCT CGTAAgcataaatatttatatttcattattttgtaaGCTAAGTCGAGTCT TCATGGTCCCTTACttataaagattttgttttaaaaaaaaactacgaACG AGGGGGGGggatttaaaactttctgatagTTGGTCTTTTATTTTAGCTAG AAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCTGATGACCCCTGATG CTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTTCAGCCaaacatatt ttcaatatatccttcaaaatatttttcatttcagcgCGCAACGAGAAACC GCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCACCCAGAA CGCCAAAAAGTAAGTCAACTCGTTATATGCACCATAGCAATGTCTTTCAC GGACCCaacatctgattggttgaaattgacgtattgactgaatttaccaa tcagctattggttccgtgatgtaatatcagaagacattgcaatggtgcat gtAATGAATAGGGTGTGTTTATAATTGATTGGTATTTTAAAGACAGGGAT ATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCATCTTCTGCTCGAGAG AAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACTTTCTGATCTGAAGG TACCAAACTTCACACTACTGATTGTATTATATGCTGCAATTAAAACCATT GTATAACAAAAACCCTCGACACAAGATTACCTACGAACCAGATTTTGCCA ATTCTTTGGGGCGCACATGGTttatacccagctggcacacaacgttgttt caacgttcatctaacgttatatggacgctgtgaacgttagataaacgtcg aaaaaacgttatgtgccagctggatAGTAAATACTCTTGAATGATAAGTG AGGGTAATAAATTGTTGGCAATAGATAAATTGGAACATCATGTCTTGTTT CTTTTTCCATACAGTGTCACAACCACAAAACTCGATGCCTCCAAAGCTTA TGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTTTGCGTTTGTTCATG GTTCCTTTAGGTACGACATTTACATAGTTCAGGTGGAAAGCTTTCACGTA ACTTTTCGCGAGGttgaaaattcgcgaaaattattAAATAAGTTTTCGTA AAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACGACGTATAATTTGCT GAGATCACCatgtttgaatgaaaaagactttgtagtattattttttgaaa aatacggAGTTAAAAGACAGACCATGtcgtgattttctaaaaaagataat TTGTATGTCTTAAACGTAAAACTTTTGAGATAGATGATGAGTGGCCTAAA TAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTACTTTTTCTGTCTCGT TTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTAATGACTATTACTGG GACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTCTATCAGAATGTTCC TCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCGGTGCGTTTTCTTTT TAATCGTTTTctttcactgacctttatatatccctggaccaagttactca agcaaaatattatgatcggagtttttttgaaattggtacccgtgGAGAGG GCGCTAGATCTAGTTTTGCTTGTACATTAATGATGTATCATCGTTTGTCG TAAGGCAAAGTctcaaacactacaatggcttctttgagggtaccaacttt caaaaacttcgatcaaaggtGGCGGATATTGCTTGGttcagggatatata aaggtcagtgttttCTATACAAAAAAATGTAAGGTATCATTTTTATGCAA TGAGATCTGCAATATCCATCTGTGTCTCTTACCCCCGTGACTTACTACCA TTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTGGCTCGAAGATGTCA AGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTGCCATAAGTCCGAAA TTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTATCTGCCGATGAAAT TCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTAGGATGATATGATAA ATCAACATtgactaaaaaagaaaacatgacaCACAAAGAGACATGGCGTG ACAGTTGAGTTCCGGACAAATATAATAGGCTTACTGTAATCCGTTTCCAG TACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCTTGGCAAAATCAATC AACTCGTTGGCATATTACCGGGTGTGTCAGAAATAAGTTACcctttttga tttgatattgtaggcTTTTCGCCTTTTCTgacaatttttaaaattgacat tttaggtttttaaacataacttttgaacccatgaagtaaaattaaaaagt aatacaccaaattttaagttaggctttcctctgtATGATtcagaaacttt tgaaaaacctCTCAACTACTGACaacaatattaaattaaaaaaggATAAC TAATTTCTGGAACACCCGGTAGTTTAAAAAGATATTTCGATTCATTCCTA GAACAAACAACTAAATACAAGCCAGTTGTAAATCGTTAACCCTCATACTG TGATGGAGGATTTTTCATATACTAAAAACTGACCTCTTGATTCGGGACAT GCTGTAAATTGCATGTTAACATGGAAATAACTGAACAATCAATGTTCATC AAGGATGTGAGACTTTCAATAATGTTGAAACTGGTGACGGactaaaattc tgaaaataaaatgcaaaaaaaaaaaatacattagTTTACNAGACTAaaat tctgaagaaaaaaaatgcaaaaaaaaaaatacattagTTTACTTTCGACG AGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaatttcgcgaaattga atgaaatggaaatttttaaagttttgttttcGACGTTTTGTAACTCCGAA CGTTTTAGTTTTGGCGAAAGCTTGACAtcttttggaccattttcagttga tttaaGGCCTTCTAGGAAAATACATCAACGCGAAACGTTTCAAAATATTG ACTTAATAATGGAAATAAATCGAGAAATTTGTCTCGCAGAATTGAACCTt gtgaaaattaatccaattaaagcaCACTGACAAAGAACAGTTTAAACAAT GAAATATTGATGATTTTGACGAACATTACCTTAACATAACCAATGACATA CGAAATATCGActttacaaaatagaaatactTAACCACTCATACGCGTAC AAAGTTATTCTAAATGAGACCTTCAATCTGTTACTTTTTTATGGAATTGT TCATTTAATATTTTAGCAAATTAATTATCAGACATTTTCTAGATACAGTT TTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCTTTCCAACAAGCAAC GATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAAC GTATACCATCGTACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCT ATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTG GTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaa acagaAGGGTGAGTACGTCTACGTTTAGGATACTGTTCGCCCCTTGAGGT ACTCTGCACCAGaatgtatctcacgtttatcgcttcgtagtacactctgt gcgcattgtctgtttgataaaaaaattcccgtatggagacctctgcgatg aagtatgatttatataaatagcaacacttctctcgtcttctccccctctc tcaccaacactccatcgcagcggtcggtttgaaaaatctcaaatgagaaa aggcaatgacaacagaccctctacggcaatgaattttgaaattagtcgta gatactgggtctgtgtacaggcAAACTTTGAGGGAGTCAAAGGTTATTTC TCTCTGCTACTCGAGATGTTCAATGGCTCGAACGATCACTGTCTACTTCT TGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCTAAAAGAAGCAAGGT GATTTTCCCCTGAATAAACCTTGACTAAAATTGGAAATTATGTTCATTTG AAACTCATATGAATCCTTTTGTGTTTGTTATTTCGTAGTATTTTCAAGTC AATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacgctttttttataata atacactttataagaatgtccatgataaaaatggccaaaaaattaaggat aatgctaagaatatcaccatcatggaattttgctactcagctaagaatga catttttagagcattttcaattataaattgccaattacccccaagtaagg ctcactcctttcacaaaaatgccattttatgcttgagacgtatgtactaa atgtcaaatctagtctgaattaggattctaacctaagaataatgtaagaa tattttaggatgatttttttaagaaaatccatgataaaatggatttacac cattcttatgaaAATAAGCGTGTATTTGAAGCACACATTTCAAGGTTTTC TAAAatcttttctttactttttaggATGGTGACTTTGTGATACGAAACTC ATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTG TCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAACAATCGCTATTAAAT GCTTTTCATTGATGTTAGGTGTATAATATTTTCTCAATGCAGAATTTCCT aatctaccttatcggggaaaaaaatgtcggagttttatttaaaaaagatc ttgtaaatcgacgtttaaagcacttatttcggttaataaagatgtaaaaa atatagattttaattttggttggggtttaaagaattgggtaaaagttttg gtcgggtgataaaatatcggggaaaaaattcgtagggggaaaatttcgtc accccttcaaaattttcgtcacttccCCCCGACATTTTTCCCAGATAAGG TATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaattgaagaaaaagat ttcgcgatttctttaaaaacaataatTCTAAAGAGCAAAACtttatggaa aaaaatataaaaggtAGAAATGTGTCCGTCCATATATTCTGTGAATTTTC TTACTTGATAGAAACTAGCCAAAATAggccaaaattacaaaattatctGC CTAAAAAGTATTGAACACAAACCGAAGATTAATTCTTTTCCATTTATAGG CTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTACTGAGGTAGG TCATTCATTAAACACTTATACATACTCGAAGTGACCGGGAAGGGACTCGG TGTCATCCTCCAAATAATGTTATATGCTATGTCATGCATGGTAACACGCT CCATATTGAGTAATATTAGCCATAAACTCtctggtacctaatagccgggg gggggaggaggttggaaaaaatctcaaaacttaataagcggggcgttaga ataaaaatgtcctaggtggaaaattttcgaaaaattaattagtggggggg cggctattaggtacccgagagtaagccTTAATACAATCACAGTAGAATTT TCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAACCATTTATTTATCAG TCATATTTTTGATCAGCTAAGATGGATTAATGAGTTTCTCAATAACTTTT TATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTA TCATCAGAATAACGAAATCATACTCAACACTGGTGGTAAAGTGAAACTAC TCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTTATAAGgaagaaa aacgaaaatatttttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCT TTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGA CTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACCGAAAATATGGGA TCAACATTGATCACCATCATTGTTTTGGATCATTGCTTTTTTATTAACGG AGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTT CGGGGGTattaaaatagaaatctcttaggaattcctcgggggaattctat tgtaatactcccgaaacaattccacaatgcatcgcttttttagaaaaatc aaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAAAAGTCAGAACAC TTACAGATatagaagaaaaaaagtattttttatgGGATATCTATGAAAGA CACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAAACTTGGTGATAG AAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATT TCTTGTTGCTTTTTagtttagatttttttgttatgtaaatacgaatttga ttatttttctaaataattaTTGATAGATGAATAGGTTTTCTAATGGCgga taattctttttttaaatatttgtaATTATTGGTAActtaaatttacagaa aaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001326-exon-sc0000010-1491911889:140211..140254TCONS_00001326-exon-sc0000010-1491911889:140211..140254Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:140211..140254TCONS_00001326-exon-sc0000010-1510915933:140211..140254Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:140211..140254TCONS_00001326-exon-sc0000010-1575043694:140211..140254Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:140728..140843TCONS_00001326-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:140728..140843TCONS_00001326-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:140728..140843TCONS_00001326-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:145789..145840TCONS_00001326-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:145789..145840TCONS_00001326-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:145789..145840TCONS_00001326-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:146166..147125TCONS_00001326-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:146166..147125TCONS_00001326-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:146166..147125TCONS_00001326-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:147920..148090TCONS_00001326-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:147920..148090TCONS_00001326-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:147920..148090TCONS_00001326-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:148541..148561TCONS_00001326-exon-sc0000010-1491911889:148541..148561Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:148541..148561TCONS_00001326-exon-sc0000010-1510915933:148541..148561Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:148541..148561TCONS_00001326-exon-sc0000010-1575043694:148541..148561Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:148845..148919TCONS_00001326-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:148845..148919TCONS_00001326-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:148845..148919TCONS_00001326-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:149525..149567TCONS_00001326-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:149525..149567TCONS_00001326-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:149525..149567TCONS_00001326-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:151931..152168TCONS_00001326-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:151931..152168TCONS_00001326-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:151931..152168TCONS_00001326-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:153135..153223TCONS_00001326-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:153135..153223TCONS_00001326-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:153135..153223TCONS_00001326-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:153810..153855TCONS_00001326-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:153810..153855TCONS_00001326-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:153810..153855TCONS_00001326-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1491911889:154279..155140TCONS_00001326-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1510915933:154279..155140TCONS_00001326-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001326-exon-sc0000010-1575043694:154279..155140TCONS_00001326-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:140211..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.04087 4.91785 16.7593 9.54854 1.8323 2.94183 2.81154 0.160332 1.67032 3.49504 1.92689 1.58444 2.4808 3.67482 0.433667 2.6798 2.66112 0.531353 0.000490841 2.56768 0.462402 1.53278 3.78142 4.65546 2.30777 4.95332 9.14906 7.29492 0.00314361 0.00178863
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001326 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top