TCONS_00001324 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001324
Unique NameTCONS_00001324
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2693

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001324 ID=TCONS_00001324|Name=TCONS_00001324|organism=Clytia hemisphaerica|type=transcript|length=2693bp
CGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGCCAC
CTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTG
AACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATACAA
CTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAACTG
AAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGA
GGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCAATC
TCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAGCAG
CACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATTGAT
AAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAG
ATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCACCTG
TACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAA
CCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAG
GGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATGAAA
TGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAG
CCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGA
GGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTA
AAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACCTTA
GAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGG
AAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCAC
CTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCA
AAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAAT
GCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGC
CCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCT
TCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGACAG
ATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAACTC
ATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCA
CCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGcgCGCAACGA
GAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCAC
CCAGAACGCCAAAAATGTCACAACCACAAAACTCGATGCCTCCAAAGCTT
ATGGGAAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAGA
TCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCGT
ACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACAA
ACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGGA
GCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGgATG
GTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATA
TCAATCTTTCACGATAATGTTGTCCGCAATTTACAGCTGCTTCAAAAAGA
CGGTAAAATGTACTTGGGAAGTTCTACTGAGGGGTTTGAAGGAGTACCTG
AATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGGT
AAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATT
TATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGAA
TCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAA
TTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAAC
CGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGCT
TTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGA
TCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcctc
gggggaattctattgtaatactcccgaaacaattccacaatgcatcgctt
ttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGAA
AAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGGA
TATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACA
AACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGA
TACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgta
aatacgaatttgattatttttctaaataattaTTGATAGATGAATAGGTT
TTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAAct
taaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139250..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001324 ID=TCONS_00001324|Name=TCONS_00001324|organism=Clytia hemisphaerica|type=transcript|length=15891bp|location=Sequence derived from alignment at sc0000010:139250..155140+ (Clytia hemisphaerica)
CGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTAACA ATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTATTTC ACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAACAT TAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctgacg cctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGACCA TTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGTATT TCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAGGAA CGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGGACT GTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAACCT GTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttctct TGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCACCAC CAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGATAGC ATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAACAG TTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAACAT AATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTATTGG GTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttcaatg tgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATTGAT CGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATATTTAC GGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccctcttt tttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTG TGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAG AGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGA ATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGT TcgagacgctgacgcctttgaccacttagCCATCACTCCATAATTGCTCT ATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATT GTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAG AAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGGTAATC ATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGT ACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatc taaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACC GCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAACA ATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGGTAGGT TATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTT GTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTG CATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAA AGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGA GTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagcccccccccc cagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACCAACGT GATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaaaggtg actgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACATAGAT TTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggttttaaa agtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTACGAAG TTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATTCAGGA CTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATAGTTTT AACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATAAAG TGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTTCGGGG AAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATATGA TAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGTAACAA ACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAatat gatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATTATTTT GGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGCTTT ATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGTGTTTA GATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaattcaaaG TACACGATTtattagtctacacaatagacagatacaggcttttaggcctt actcttgttCTATAGGCACTgatataggcggccactagtgaaccccaccg ggaattgcttattaataggtttaaacataatagacaacattcacaaaaga tgtttatcaatagagattttaaataaaagaatgtttaaaacacagNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGACTA AACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGGtgaat catttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTTCTCGT CTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGATGATTG AAATctatgtttaaagattttttactgctgaaagtttaaaaaggaagtTT TTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaaggttttt ggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCTT CCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAATCTTAA ATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacatatatg agtactacaaggttttttgacgatttttgacataccctcacctaattttt gaaaaaggaattttagtacacatgtactgaaatttatttttacattttag caTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGAATG TGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAGCTGTC AATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAAACAGT CAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATGGGT TATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttgagataa aaatttcctattgaaatattaatggggatacaaattctattgttccaagg ttaaaaacccagtggggatatgattttggagtgcaatttttacacatgga attttgagtggggatgaaatcaaagtcaatttcccagtagggctgaaatt caagggtattctaccaccggggacaaaatttttgcttaatttgtgacaca gggacgtatttaaatcttatatagagagtttttattttttcattttgcct aaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNtagttaaatttcctaaaatttggtgatttttagtactcatgt attaaaatttttcttaaatttcttgaagacccccacctaatttgggattt tagtacacatggtactaaaatgcttttaggctttttttgtaataccacca cgtcactaaaagtcatgatgtctgaaattttagtaccgacccccccccct ctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctctagtt tagacggccgactttctgccctgtctattctaattgttagagtaggcaga agtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaaaagag ggcgatgcattgactttagacggcccactttatgcccactttgattcaca attagaatagacagggcaaaaagtgggctgtctaaactagagctaagctC GTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGTCAGTA CCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGTATTCT ACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGGCGTCA TAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCCTGT GTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATTTAC GACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacacctttttt gacaacaaataatatgcccataacttttgatctagagaagttgggattTT GAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGTATAGG Tcttctttgattttgaagacccccaaaaatcatgaattttctgacctttc aattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTGCAGTT TTTCAAggttggtaacattcaaattccgaatcagcaccctcaaattgacc aaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgttttggtGG CACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAATGAT GTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAATTGCT TTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATTTCT ATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTTCGTTT AAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATAGAGAT ATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATTATC TGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgtacaca gacccgatatctacggctaatttcaaaaattcatttccgtagacaaacgt gagatacactctggtacagagtacagCTTAGGGATCTGGATATTACTTTT GCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGATATTCT GTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTGCTACT TTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttTGGAAG CCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGTTTTAT GGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTACTTCA ATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaatac acgtttttttataagaacaaactatataagaacataaggcttcactggcc aaaatgttaagagcaagttaagaacattttaaggctttgtggactcaaaa ccacccaatttcttaggaaaatagtcaaaattattcacaaaatggtcaaa ataagaacatgttcagaacaattttaggcttaaaactcaaaaagttcaga acattcaaggcttcaaaaaatttggatgtttttataaaaaaaacgcgtAG TCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTTACTtt ccttttctttatttttcatttatcacatttttttttcagtcgCAAGACGA TCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTGGTGTA TTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTATTTTG TGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttatacaaG TTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATTTGATA TTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaattttaaac cccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCAACTTA ATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATACTTTC GATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCACAACG TCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAAC ACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCT CCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAA CATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCG AACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAA CCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGC TCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGC AACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACAT TATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTA CATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAA CGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCA AAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAAT GACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAA TGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAA ATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTC AGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGC CACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAA GTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAG AAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaaatttg ccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTTTTT CTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAACATC ACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAATTTTAT CGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGTATCCT CGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGTAAGAA TTTCTCTCcgactatattcactcaggagatttgggtggcagagcagcata tgcatttcgtccttattgaGACTCATCCATCAGATATATATCTATCAGTG AATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGATTAAG CCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTAGTGTC CGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaactagccta gttaactaagcctgtattcacaaggctaggataCACCGCTAATGGCAATA TAGcattttcggcgctttaaagattttttatatttacggattttatgttt gccttggaatactggtAATTCAGTTACAagttaccatcagatttatccta gtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAGGTG GTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACCATCAT CTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAAAGACA GATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAACT CATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCC ACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATGATC ATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAACTTAT TCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTCCAGAT TTTTCCacgaaaaagttgattttgtattggaaatccaggagttacaaaaa acattttacctTAGAAATCCGCtatcgtccaccccctgtatgctGTTTCT CAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttatccaCT GACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAGGGGTA TTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAAAATAG GATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACAAGTTG ACATGCATGATAtcgttaatatttttttgttgctttttaagGTCAAGAAC CTGTATTACCTCGTAAgcataaatatttatatttcattattttgtaaGCT AAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaaaaaaa aactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGTCTTTT ATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCTGAT GACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTTCAG CCaaacatattttcaatatatccttcaaaatatttttcatttcagcgCGC AACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACAT TCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCATAGCA ATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtattgact gaatttaccaatcagctattggttccgtgatgtaatatcagaagacattg caatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTATTTTA AAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCATCTT CTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACTTTC TGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGCTGCAA TTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTACGAACC AGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctggcaca caacgttgtttcaacgttcatctaacgttatatggacgctgtgaacgtta gataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATACTCTTG AATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGAACATC ATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCGATGCC TCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTTTGC GTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGTGGAAA GCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattattAAAT AAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACGACG TATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgtagtatt attttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgattttcta aaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGATGATG AGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTACTTT TTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTAATG ACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTCTAT CAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCGGTG CGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccctggac caagttactcaagcaaaatattatgatcggagtttttttgaaattggtac ccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGATGTATC ATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctttgagg gtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTTGGttc agggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGGTATCA TTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCCCCGTG ACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTGGCT CGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTGCCA TAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTATCT GCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTAGGA TGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCACAAAGA GACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTACTGTAA TCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCTTGG CAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAATAAGTT ACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaattttt aaaattgacattttaggtttttaaacataacttttgaacccatgaagtaa aattaaaaagtaatacaccaaattttaagttaggctttcctctgtATGAT tcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaaattaa aaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATATTTCG ATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATCGTTAA CCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACCTCTTG ATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGAACAAT CAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGGTGACG GactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattagTTTAC NAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacattagTT TACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaattt cgcgaaattgaatgaaatggaaatttttaaagttttgttttcGACGTTTT GTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttggacca ttttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAAACGTT TCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCTCGCAG AATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAAGAACA GTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAACATAA CCAATGACATACGAAATATCGActttacaaaatagaaatactTAACCACT CATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTACTTTTT TATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACATTTTC TAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCTTTC CAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACC TACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAATG CACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCT GGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaa attgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACTGTTCG CCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgcttcgta gtacactctgtgcgcattgtctgtttgataaaaaaattcccgtatggaga cctctgcgatgaagtatgatttatataaatagcaacacttctctcgtctt ctccccctctctcaccaacactccatcgcagcggtcggtttgaaaaatct caaatgagaaaaggcaatgacaacagaccctctacggcaatgaattttga aattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGGAGTCA AAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACGATCAC TGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCTAAA AGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGGAAATT ATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTCGTAGT ATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacgctt tttttataataatacactttataagaatgtccatgataaaaatggccaaa aaattaaggataatgctaagaatatcaccatcatggaattttgctactca gctaagaatgacatttttagagcattttcaattataaattgccaattacc cccaagtaaggctcactcctttcacaaaaatgccattttatgcttgagac gtatgtactaaatgtcaaatctagtctgaattaggattctaacctaagaa taatgtaagaatattttaggatgatttttttaagaaaatccatgataaaa tggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCACACATT TCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACTTTGTG ATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCA CGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAACAAT CGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCTCAATG CAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagttttatt taaaaaagatcttgtaaatcgacgtttaaagcacttatttcggttaataa agatgtaaaaaatatagattttaattttggttggggtttaaagaattggg taaaagttttggtcgggtgataaaatatcggggaaaaaattcgtaggggg aaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACATTTTT CCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaattg aagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGAGCAAA ACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATATATTC TGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaattaca aaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATTCTTTT CCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCT ACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGACCGGG AAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCATGCAT GGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctggtacct aatagccgggggggggaggaggttggaaaaaatctcaaaacttaataagc ggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaattaat tagtgggggggcggctattaggtacccgagagtaagccTTAATACAATCA CAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAACCAT TTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAGTTTCT CAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCTGAA TTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGGTAA AGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTTA TAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGAATC CAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAATT CGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACCG AAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGCTTT TTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGATC TTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcctcgg gggaattctattgtaatactcccgaaacaattccacaatgcatcgctttt ttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAAA AGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGGATA TCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAAA CTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGATA CTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgtaaa tacgaatttgattatttttctaaataattaTTGATAGATGAATAGGTTTT CTAATGGCggataattctttttttaaatatttgtaATTATTGGTAActta aatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001324-exon-sc0000010-1491911889:139250..139290TCONS_00001324-exon-sc0000010-1491911889:139250..139290Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:139250..139290TCONS_00001324-exon-sc0000010-1510915933:139250..139290Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:139250..139290TCONS_00001324-exon-sc0000010-1575043694:139250..139290Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:139764..139879TCONS_00001324-exon-sc0000010-1491911889:139764..139879Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:139764..139879TCONS_00001324-exon-sc0000010-1510915933:139764..139879Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:139764..139879TCONS_00001324-exon-sc0000010-1575043694:139764..139879Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:145789..145840TCONS_00001324-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:145789..145840TCONS_00001324-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:145789..145840TCONS_00001324-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:146166..147125TCONS_00001324-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:146166..147125TCONS_00001324-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:146166..147125TCONS_00001324-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:147920..148090TCONS_00001324-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:147920..148090TCONS_00001324-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:147920..148090TCONS_00001324-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:148845..148919TCONS_00001324-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:148845..148919TCONS_00001324-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:148845..148919TCONS_00001324-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:149525..149567TCONS_00001324-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:149525..149567TCONS_00001324-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:149525..149567TCONS_00001324-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:151931..152168TCONS_00001324-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:151931..152168TCONS_00001324-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:151931..152168TCONS_00001324-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:153135..153223TCONS_00001324-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:153135..153223TCONS_00001324-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:153135..153223TCONS_00001324-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:153810..153855TCONS_00001324-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:153810..153855TCONS_00001324-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:153810..153855TCONS_00001324-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1491911889:154279..155140TCONS_00001324-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1510915933:154279..155140TCONS_00001324-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001324-exon-sc0000010-1575043694:154279..155140TCONS_00001324-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139250..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00154904 0.00152788 0.0201254 0.016494 1.18114 8.93324e-06 5.68426e-07 0.00165651 0.00665402 0.000725904 0.00068674 8.01431e-10 4.236e-10 0 9.50426e-07 4.90069e-06 0.00199848 1.72652e-08 0 1.39244e-05 1.08094 0.00349071 0.000196594 0.0204604 0 0 3.68528e-07 6.03617e-06 3.24655e-07 0.000160062
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001324 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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