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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001261 ID=TCONS_00001261|Name=TCONS_00001261|organism=Clytia hemisphaerica|type=transcript|length=526bp
ctttgtttttggtaggctggcgaatgaaaaattaactctggcGATTTCTA
GATTTTAGGCcggcgaattcttagcaagcgCAGTTGGAACGTCAGCGGCG
AACTGAACTTTTCGAACGGCGAATTGTAATTCTTTTATGCCTTATGCCTT
TTACCTGGCGAAATTCGCCGTTCGCCGGGCCTAAATAAGACCCCTGCTAA
TTGGTAGCTGCAAATATTTATTGAACAATCAGCCAGCTTACTAGCTTTTC
CTTGCTGAAAATGGGTATGATGTTTTTTGTTGTACTCGGTATGTAAAAGA
AAAGCTAGAAATAGTTCTCTACACGTAACAGAACACAATTTTCAGAAGAT
TGCTTTTTTGATAAAGTGGAAATGTTATGGGGTCATCAAAGAAGAATCTC
AGCATCAATTTACCCAGTAAAACGAAGTCATCATGTGTCGCGCTCATTTG
GTTGTCTACGTTTTGCTCCTTCTGGCTTCGCTCTACCGAAGCACACACTC
AGCTGGTACTACACCTGGTCNTAAAA Run BLAST on NCBI transcript from alignment at sc0000007:1309249..1311681- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001261 ID=TCONS_00001261|Name=TCONS_00001261|organism=Clytia hemisphaerica|type=transcript|length=2433bp|location=Sequence derived from alignment at sc0000007:1309249..1311681- (Clytia hemisphaerica)
CTTTGTTTTTGGTAGGCTGGCGAATGAAAAATTAACTCTGGCGATTTCTA
GATTTTAGGCCGGCGAATTCTTAGCAAGCGCAGTTGGAACGTCAGCGGCG
AACTGAACTTTTCGAACGGCGAATTGTAATTCTTTTATGCCTTATGCCTT
TTACCTGGCGAAATTCGCCGTTCGCCGGGCCTAAATAAGACCCCTGCTAA
TTGGTAGCTGCAAATATTTATTGAACAATCAGCCAGCTTACTAGCTTTTC
CTTGCTGAAAATGGGTATGATGTTTTTTGTTGTACTCGGTATGTAAAAGA
AAAGCTAGAAATAGTTCTCTACACGTAACAGAACACAATTTTCAGAAGAT
TGCTTTTTTGATAAAGTGGAAATGTTATGGTAAGTCTTTCTTTCTTTTTC
AGTTTCTTTTCTTTTTTTATTGAATTGAAAAAGTGGCCAAATTATAAAAA
ATATTTCTTTTTCTTCCCTCGTTCATTAATTCTCATCTGTGGCATGTTTA
CCACCAACCAAGGTCTAGTAGAGATCATTTTGTCTGCCCATTTTCACCTA
GCTTGAAATTCATGCCGATTTTCTCTATTTTTTCTTCGTAATTTTATTCT
TAGGGGTCATCAAAGAAGAATCTCAGCATCAATTTACCCAGTAAAACGGT
GAGTGATTTGTTTTTGTCATTGATATGTTCGATTGAAAATCTTTTCAATG
AATAAAAGAAGGAAGGGGTTCAAACTGATCAATTTCAGTCTTTTGTATCA
AAAAATCAATTTCAAAACTGGATTGTGTTCGTTTGAGCATGCAAGTGCCC
TTTCTTCTCGTGTTTTTCTTTCTATCTAGCTTCTGATATCTGTTTTGGTG
AAGTTGTCCTTTTCATGGCTTGTATTCAAACTCTTTTATATCACACTTGT
TGTATAATTTTGGATTATTTCAATCGTCTCTTTTACTCTCAAAAAACGTT
CTTTCATAAAATTACTCTCAAGCGGTTTCTTTAGAGTAAATCTCAACGAT
GCTATAAAAGATCGTTTACTTAAGATTATCTCCCGATTAAGACTCGAGTC
CATACTTTAATTTTCTCTGATGTCTTGCGATATTCTTATCAAAGTCTAAA
TTCCTACTAGATTCCAAATNTTTTGTTGTCAAGTGTGACTAGCTAGGCTG
GTTATGATTCAGTGATAAAAAGGAGAGTTTAGGAATTTGTTATTGGCTGT
TACTGTGGTTTTGTTGTCGACTTGATAATGTTCTCTCCTAGAGGTGAGAC
AAGGTTAACAAATTCAAAACAGAATGGGATAATATTTTCTCAGATCCCAA
TACAGATCTAGTATGAAAATAATGATCCTCTTTTTTACATAATGATATAT
CTTGGTTTGCCCTCTGACATTTAAAGTCTGCTCCTCATCCTCTCTTCTTC
ATTTCTCTACAACAGTCGATGGCTGTAAATACAAAAAACTTAACTTTTGG
ACTTTTTGCCAAAACGTGACATAACAAACGGATATTTCATCCTTTTTTTA
CCTGTTTTACCTACTTGAATTAAAAATTTTGGAAATTAAGAATTTTGAAC
TGTTTGAATTTCNTGGTTTCTCATATCGAGTTTTCAAACCTTTTTAGATG
CCGTGTGTCTCAAGATTAAAAAAATGAGGAAACACTAGTCAATGTTGGTC
GAATTATCAGGGATTGGAGTTATTCGTTTTTACTTCGTTTCAACTTTTAG
TCGTTGTGCAATTGCTATTTATGTAGCCTTTATAGATTGTGACAAATTCA
ATTTTTACTATGATCTGAAATAAGAACTGATTAGCCACTAAGAAATATCT
TTCAAGCTTAAAATGAAGTTCCCAATAGTTTTTGCTGGTTTATTCGGCCA
GACGCTTACATCCAGGAAAGTTTGTTTTGTTTTTTTGCCTCGGGTTAGGA
ATTAAAAGTTTGCTATTTGCCATTGGCGACGTCCACTAGCCTGCTATGGT
TCTCTTTTTAGTCATTTCTAATTTTTATCGTGTTTTTTTTTTCATTTGAT
CTTCTGAGAGTATTGGAACGGTATAGGGATGTCAATTGAATCCACCTGAG
TGCTTTCCAACTTGATCAAGTTACATTTTNGCGCAATGACAATCATTTCA
TTTTTGGATTTTTATTTTGATGAATTTTTCAAAAACAAAAGATCATATTC
CAAACCAGAGGGAAATATGAGACGATGGAATTTAGGTCGTGTTATCTGTT
CAACAGGGTCGACCGTTTCTTTTTTCTCCGCATTAAAAAAATCTTGTTTT
TATAGTCAGTTCACTTGTAGTGGTTTTTGAAGTGTATCGGAGAAACATGA
ATATTCTCCTTCTTTCCTTCTATCATAGTAGAAGTCATCATGTGTCGCGC
TCATTTGGTTGTCTACGTTTTGCTCCTTCTGGCTTCGCTCTACCGAAGCA
CACACTCAGCTGGTACTACACCTGGTCNTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001261-exon-sc0000007-1575043694:1311303..1311681 | TCONS_00001261-exon-sc0000007-1575043694:1311303..1311681 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1575043694:1311034..1311078 | TCONS_00001261-exon-sc0000007-1575043694:1311034..1311078 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1575043694:1309249..1309350 | TCONS_00001261-exon-sc0000007-1575043694:1309249..1309350 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1510915933:1311303..1311681 | TCONS_00001261-exon-sc0000007-1510915933:1311303..1311681 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1510915933:1311034..1311078 | TCONS_00001261-exon-sc0000007-1510915933:1311034..1311078 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1510915933:1309249..1309350 | TCONS_00001261-exon-sc0000007-1510915933:1309249..1309350 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1491911889:1311303..1311681 | TCONS_00001261-exon-sc0000007-1491911889:1311303..1311681 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1491911889:1311034..1311078 | TCONS_00001261-exon-sc0000007-1491911889:1311034..1311078 | Clytia hemisphaerica | exon |
| TCONS_00001261-exon-sc0000007-1491911889:1309249..1309350 | TCONS_00001261-exon-sc0000007-1491911889:1309249..1309350 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:1309249..1311681 - |
Blast
The following BLAST results are available for this feature:
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