TCONS_00001253 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001253
Unique NameTCONS_00001253
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3908

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001253 ID=TCONS_00001253|Name=TCONS_00001253|organism=Clytia hemisphaerica|type=transcript|length=3908bp
CAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGGATCCTTGT
ACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTACATACCTC
TCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGACTTGGTAA
CTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTGATACGCTT
ACAGGGTACCTACTAAACAATCTTAACTGGTGCGGTGGAACGGACGCAGA
TGGACTAAATTCAACATCTTGTCCGAAAACGTGTAATGTGATGACACCTG
CTTGGACATTGGCATCTTCAGAGTTTGCTAAACAAGCAACTGGCGTATCG
AAAGTTCTCTTAAATGCGACACGTGCTAACAATAAGGACGCGTATGCTGA
TGGCAGTTTCTTCCGAACCGTTGAAATGCCAGAACTGCAAGTGGATAAAC
TTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAGGTCAGGGAAACGTGC
AATGACTCAATATCAatggaaaatatacggaaagaCGCAGAATCACGAAA
TATTGCTATTGAATGTTTTGACCAACCAAGCTTGGTATTGAACGTATTTT
GTTTGAAGTATCCAGCGGCAAAGGAGTGTGTGAGAAGAAATACGCTGTTG
AGCAAGGATATTCATCACGCCAAACAAATATCAACTCCTGAAGATGAAGT
CAAGCTTTGGAAGACTGTTTGCATCGTTTTGATCGGAGTATGTGGGATAC
TTTTGATGTATATTGTGATGACCCTTGTTCATCGATCCGTGTGTGTTGGT
AAAACTTCGAACTTCAAGTATCCTCATACTTGGTCCATGTCCAAGAAACC
GATGCTCTCCAATGATGAGATTGACAACAATAATGACTTGGAACGCGTAG
TGTGAAATTTGTTCGCAATCAAAAGGAAGTATTATAAGATGGCGCTGAAA
TGATTACGCACGCCATTGAAACAGGGTTGTTGCGAGTTCGAAAGGTCAAA
GAAATCGGCTTCAAAGTTAGCAATTGAAGAATGAGATTCACCAAGCCATG
GTATCGAATCGATTctcaaaatcaactcaaaagtGGTTTCGCTAATATGC
ATTAGGCTTCTGCCGGACAGGGCTATGATTAATTGAAAAACATACGAAAT
AAATAATAAGGATGATAAAAAAGACAATTTGTAGATAGCGATTTCGAAGT
TTGTATGTAAGTTCGCAAGAATGTTGTTATTTGATgattttacttttctt
tctgtaaataaTTTAAAGAATTGTATGTAAGAGATATATGTATTTCGGAA
GTAGTTTCTAACTGTATTGCTTCATATCATTTGGATTTAATACTTCCTGG
TTTGTATGATGATTTTGCTACGTAGCAAGGTCAAACGGTTAAGTGGgatt
tattcaatataatgtTTTCCATATAAAAAGCCTTTGAATCACCCTGTTCG
ATGACATtgaattggaacaagattgccGTCAACCTGTTACTAGTGACTGG
GAAAAGTGAAACTGCAACATCGAAATTCAAAGGTGAGTACTTTCGAACTC
TATTTTACCAATTTTCGACAAACGTCTGGCAGCAATATACACCATTGATG
gtatttgtttttcattttagatATCCGTTATCAAATTTGACCGGATAGTG
ATCGAGACAAAATAAGGCATATTCATATCAGCGAATAGATTACAAGCAGA
ATCCATAGACAAGCTATTTTGGAAACAGGCTGATTATCATAGTAGAAGTC
ATCATGTGCCGTCATTTGGTTGTCTACATTTTGCTCGTTCTGGCTTCTCT
CTACCGAAGCACACACTCAGCTGGTACTACACCTGGTATTAAAGAAGTCT
TTGTTGGAAGATGTTGGCAATATCAAAGCATCTCTGAACATAACAAACTA
CCTGAATTAAAAGTGAACATAAACTGTACAAAATTATGGCTGGCTTTTTA
CGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTGGGGTAGATGATTACA
AGACGTTCTTTGATATGTTACATACCTCTCGAAAAATCAAGAATGCTTTG
TTTTGGTCTGGTTTGCATGACTTGGTAACTGACTTCACCTTCATAAATGA
TGATTACATTGTACTGGAAGATACACTTACAGGGTACCTGCTAAACAATC
TTAACTGGTGCGGTGGAACGGACGCAGATGGACTAAATTCAACATCTTGT
TCGAAAACGTGCAACGTGATGACACCTGCTTGGACATTGGCATCTTCAGA
GTTCGCTAAACGATCAACTGAAACAGCCAAAGTTCTCTTGAACGCGACAC
GTGCTAACAACAAAGACGCATATGCTGATGGCAGTTTCTTCCGAACTGTT
GAAATGCCCGAACTGCAAGTGGATAAACTTGTCGTATATTTAGCTTCCAG
TATTGGTAAAGAGGTCAGGGAAAGATGTGCGGATTCGATTTCGATGGAAA
ATATACGGGCTGATGCGGAAGCTAAGAATATCCAAGTGGAATGTATTGAT
CAACCAAGCCTGGTACTCAATGTTTATTGTTTGAAGTACCCAAAAGCCAA
AGAATGTGTCAACAAGGATAACTTTCGAAGCGATTCAAACGCCGATAAAG
AAGAAGCTAGGAAGTGGATGATAGTTGGTATTGTGTTTTGCACACTGTTT
GTTGTCTTCTCTCTCACTGCACTCATTGCATGGATCCTCAAACATAAACA
ATCCAAACATCGAACTGCTGTCCAAATGACCAAAAGTGGTGAAGTCATCG
CTAACCCTCAAACCATTAACAACAATGTCTAATTCCCTACCCCTAACTAC
TTACTCACACTCATAATATTCATTTTGGTGTAATTTTTATAATGATTTTG
TATGGGAgggtttgattttttacaaggtttttttatattttgataataaa
atgGTGTTTGGTGTAAGTCTATCAAATTATATTTTCATCCTTTCGAATTT
CGAGTCGTTAGCTAATATCTTCCATTCGTTCACTCAATATCGTGAACATC
AGAAATTAGacaaatttttgctttaaaacatCGAGTTTAATGAAGCCAAA
AAGTTGACTCCTGCActtttattgttgttcaaaAAATGATGTCATTGTTG
AGCTTATCAACAATCATCAAGCCTGATAGCTTTCAAAAAGAGTCTTTTCC
AAATATTGGTAAGGGAGGGAGAGAAAAAACAATCGGGGCTTGGTCAAGGA
AGGCATATTGAATTAATTCCTAATCATTAAACCCTGTGTGCATATTCAAA
GTTAATTGAGTACTTATGATCGACTAACATAAACTTTTTGGGACTAATTT
CTCACACAGGTTGTGGAAAACCGTTTGTTTGATTTTGGTAGCCGTGGTGG
CTGTTCTAATCGTTTACATCACGATCAGTCTCGTGCACCGTGCAGTGTGT
TACAAACCGGGTGATTACAAATATTCACATAGCTGGTCTTTCTCAAAGAA
ACCCATGCTGCAGGACGATGAGGTAGAAAATAATAACGATATTGAACGTG
TGGTGTGAGACCTGCTTTGTCATAAAAAGGAAAACTGCAACAGTATATTA
ACCTGAAGTTATGGTTAGTTTTTGGCAGGAGATGACAGGTGGAGGATGGA
GGGTTCTACTTCGCGTCACTAAGCCCACCGCTGTATTCACCAGCCGTCAA
AAGATATCTAAGAGAACAAGTGCTCTGTATTATATGACGGAACGAACACT
TTTACCAAGAGACATTCAAGTTATGCAATGTTAATTATAATTTGATTCAC
AATTTTTCTGACAAAAGAAGAAACTGTGtataaagatattttaaatatcC
GGGATTTCAGTTTATTCAAGCTTCTTTAAAGTATTGTAAAATTAGATGTA
CGATTTATTAAGGTAGAAATATTAATGAAGATTTATGCTTGAAATATGTT
TATTGATA
Run BLAST on NCBI

transcript from alignment at sc0000007:1297246..1308978-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001253 ID=TCONS_00001253|Name=TCONS_00001253|organism=Clytia hemisphaerica|type=transcript|length=11733bp|location=Sequence derived from alignment at sc0000007:1297246..1308978- (Clytia hemisphaerica)
CAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGGATCCTTGT ACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTACATACCTC TCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGACTTGGTAA CTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTGATACGCTT ACAGGGTAAGATCTTTGTTGAACCTGATCGAGAATTTCTAATATACCTTA GTCCAAAATAACCCAATTGTGCTTTTTTCTCGAGTTCGATTTTAATTTTT CATATAAGAAATTTTTTTTGTGATTGATCTCCAGGTACCTACTAAACAAT CTTAACTGGTGCGGTGGAACGGACGCAGATGGACTAAATTCAACATCTTG TCCGAAAACGTGTAATGTGATGACACCTGCTTGGACATTGGCATCTTCAG AGGTACGAGGTATGTTTTTACCATCGTAAACCTTTTCAAAAGTTCCTGAT ATTATACTATATATTTTTATTTTTTATTAAAAATCTTACAAACTGATCTC GTGTGAACTTTTTCTTCGTTTCATAGTTTGCTAAACAAGCAACTGGCGTA TCGAAAGTTCTCTTAAATGCGACACGTGCTAACAATAAGGACGCGTATGC TGATGGCAGGTTTGTTACACATTTCTGTCAGTTGTGGTTCTCTGTTTTCC AATATTCGTGATTGTCGTAGCATTAGAAAGTCGCTAAGAAAACCTCTTTA TCATAGTGAAAAGATGAAGTACCTACCAAGCAATATCCGCTTTTTTGAAT TAAGCAGTGCTCTCAAGAGCAGATTTTTCTAAATTTATAATTTCAATGTT GTGTAGTTTCTGCATAAGAAAAGTGAACGCTACAAATTGTTGTTGATTTT ATTCGATTAGGGCTCAAAAGTTACGCCCAGTAAGCCCGCTACGCCCACGT GAAGCACGTAGTCGAAACGTGATCGTATTCGTTAATTTTATTACAATATA CAAATTAGTCCTGATTTATTTCATGCTAAAGGATAAATATTTAGTATCTT TCAAAAATAATAATTTGATTAGTTGCTTTCACTTTTGATTCTTGTTTCAG TTTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATAAACTTGTCG TGNTGTTTCAGTTTCTTCCGAACCGTTGAAATGCCAGAACTGCAAGTGGA TAAACTTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAGGTCAGGTACG TAAATTACCATGCTACAATATGAAAATATATAGCGATTAGAATTATGTTT ATAATGTTGATGTCCCTTCATCCTTTATTCTTTGCATTCTCTTGCCTGCT ATTGCATTTTACTNTTGATGTCCCTTCATCCTTTATTCTTTGCATTCTTC TGCCTGCTATTGCATTTTACTCTCAGGTATCTGATAAATTTGAGTTTGAA AGGATTGGCGAGTTGTATAAAATATAATAATTGACAGAATTGACAAGCGA GGGTAGGGTCGTATCAAGGCACCTTAGATCTCGGAATTTGATAAGGAAAT TGTAATTTTCCAATTCTCTCTAACTACAGGGAAACGTGCAATGACTCAAT ATCAATGGAAAATATACGGAAAGACGCAGAATCACGAAATATTGCTATTG AATGTTTTGACCAACCAAGGTGACCAATAATAAGAAATCCTTTTGTTTAT GTTTTATCTTTAAAGCTTCAATGATCTAACTGACTGGAGCCTATAATTTA TTTTAAATTTAATGAGTTTTTATCTTGTCGAGCATAGATATCGATTGCTC TCGACAAAAACAAAGAGCTATCTTCGATATTTCAATCGATATTACTTTTA CCATTTTCCAATTTTCCTTAATTGCAAGCTTGGTATTGAACGTATATTGT TTGAAGTACNATTTTCAATCTATATTTTCCACTTTTTCTTATTTCGCAAG CTTGGTATTGAACGTATTTTGTTTGAAGTATCCAGCGGCAAAGGAGTGTG TGAGAAGAAATACGCTGTTGAGCAAGGATATTCATCACGCCAAACAAATA TCAACTCCTGAAGATGAAGTCAAGTAAGTTGTGTGAATTCAAAACGATCT TAAGAATTTCTTTATATTATTTACGCGCATTACACTGTCCGGCATTGAGA CTTGCAGATGGTGNGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATT TAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTA TTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTT TATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCTT TTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTATGC TTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTAT GCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGT ATGCTTTTGCAGGCTTTGGAAGACTGTTTGCATCGTTTTGATCGGAGTAT GTGGGATACTTTTGATGTATATTGTGATGACCCTTGTTCATCGATCCGTG TGTGTTGGTAAAACTTCGAACTTCAAGTATCCTCATACTTGGTCCATGTC CAAGAAACCGATGCTCTCCAATGATGAGATTGACAACAATAATGACTTGG AACGCGTAGTGTGAAATTTGTTCGCAATCAAAAGGAAGTATTATAAGATG GCGCTGAAATGATTACGCACGCCATTGAAACAGGGTTGTTGCGAGTTCGA AAGGTCAAAGAAATCGGCTTCAAAGTTAGCAATTGAAGAATGAGATTCAC CAAGCCATGGTATCGAATCGATTCTCAAAATCAACTCAAAAGTGGTTTCG CTAATATGCATTAGGCTTCTGCCGGACAGGGCTATGATTAATTGAAAAAC ATACGAAATAAATAATAAGGATGATAAAAAAGACAATTTGTAGATAGCGA TTTCGAAGTTTGTATGTAAGTTCGCAAGAATGTTGTTATTTGATGATTTT ACTTTTCTTTCTGTAAATAATTTAAAGAATTGTATGTAAGAGATATATGT ATTTCGGAAGTAGTTTCTAACTGTATTGCTTCATATCATTTGGATTTAAT ACTTCCTGGTTTGTATGATGATTTTGCTACGTAGCAAGGTCAAACGGTTA AGTGGGATTTATTCAATATAATGTTTTCCATATAAAAAGCCTTTGAATCA CCCTGTTCGATGACATTGAATTGGAACAAGATTGCCGTCAACCTGTTACT AGTGACTGGGAAAAGTGAAACTGCAACATCGAAATTCAAAGGTGAGTACT TTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGCAATATACA CCATTGATGGTATTTGTTTTTCATTTTAGATATCCGTTATCAAATTTGAC CGGATAGTGATCGAGACAAAATAAGGCATATTCATATCAGGTGAGTTTAG ATAAACACTTAACAAAGGAAATTGGCATTTCTTTAATGTAGCGCGAAATT GTTATTGTTTTTGTTGAATTTTAAAAGTTTTGCGGTTTATCACTTTCGCA ATTTCATGCTATTATTTAAGTACAGAAAGNGTTGAATTTTAAAAGTTTTT GCGGTTTATCACTTTCGCAATTTCATGCTATCATTTAAGTACGGAAAACT TTTGCATTGTTCATTTACTATGTAGTTGATATGGGATAAGCTCTTCAAAA AAACTCCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTGAGGGTGCT TACCCTAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGAAGAATTTT TTAACAGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTTCATTTTCT CACTGCGTGATCTCGCACATTGATGGTCGAATATAATCAATAAGAAAAAT CCACAAGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATTATGAACCA ATTTCTTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAAGACTCTTC CTTCCTTANGTTCGATGACATTGAATTGGAACAAGATTGCTGTCAACCTG TTACTAGTGACTGGGAAAAGTGAAACTGGAACATCGAAATTCAAAGGTGA GTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGCAAT ATACACCATTGATGGTATTTGTTTTTCATTTCAGATATCCGTTATCAAAT TTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATTAGGTGAG TTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAATGTAGCGCG AAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTTGCGGTTTATCACT TTCGCAATTTCATGCTATCATTTAAGTACGGAAAACTTTTGCATTGTTCA TTTACTATGTAGTTGATATGGGATAAGCTCTTCAAAAAAACTCCAATTCT TATCTTGTTCTAATCAAGGGGAAGATCTGAGGGTGCTTACCCTAACTCTC TCATGGTGAGATCAAAAGGGGAAAAAAGAAGAATTTTTTAACAGTTAAAG CCATCATAAAAAGGCGTCCTTTTTGTTTTCATTTTCTCACTGCGTGATCT CGCACATTGATGGTCGAATATAATCAATAAGAAAAATCCACAAGAGAGCT CCCTATTCGTTGCACCTGCTATGTATATTATGAACCAATTTCTTTAATCA TCAATTTTGTATGAGAACCAGTCAGAGAAGACTTTTCCTTCCTTGAAAAT CTTGTTTTCATCGACACCACCTTATGATCTACCATTCTAATTTTTGTTCA ATTTCTTCTTCATTTTTCTCTCTCATGTCAATATTTTTATTTTATTGTCT TGTTCATTTGATTGTCGAATGTTTTATTATTTTGTTCATCACCTTAACTA AAGAGGATTGCTGCTCATAATTCCTGACAGTAAAGTCGCTCCTTTGTTTT GCCGGGGATGAAAACTACTTTAACTGCTTCTGGTCACCCTCTTTTCTCAG GAGAAGAGAAAACCTCAACGAATTACTTTTTCCATCCATTGTTTCTTCAT TTTTTAATAATCGTATATCCCTCAGAACATAATAAAGCAGCTGGTCAAAC CCAGAGACATCTTACAAATTTCAAAACAATGTAGCGTTGTTACAAATGGA GAAAGATTATTCCGTGATATACTATCAAGTCGTTTCATGTACATCTCATT AAAGAACAGTGTAGTATTTTCTTCTGATTAATACCTTGTCATGTTTCACC GTATGTTATTAATGAGCTCTTCAAATACATAGTTAATTGACAGATAATTA AGTTGGTTAATTGATACCCATTGCTTTTGAATGAAGATCCCTTGTTGTGA TATTATGGGAACAAAATACGGTCAGGTGCAGGAAGTAGATCTCATTTAGA TCATATTCTCTCGCATGGTCGGCTGGATGCAGTGCTCTATCTTCGATTGT TGTACATACATAGTTTTCGTTCTGTTTGCATGAAGGATTCTTGTGTTGTG ATAACAGTCTTTCAATGATGGTGTGATTTGCATTTCATATTTATTTGCGA TGATAGCTTTCCCTTTGCCTATTTGAAATGTACTTTGTCAACAATAAGAC TCAGGGGAATCTTTTCATTTATTGATATTAAGATTTTGGTTGGGGTTCTC TTGCTGTTGTCTGTTTGACTGGTGTACATTATGTAATGACACCCCGACGT GTGCTTAGTAAGAGGTACCTCACTGCGATTTTACTCTGTTAATAAGATTG TTTGGTACTCTAACGACCTATGATCTCTTTGGAATTTGCACTCTCAAACT GTGCTTTACAATGGAAGGATACTGTGAAATTTAAATTGATGACATTGAAT TATTTTCTTCTGGTTCCTGATGTTTTTGTTCATTTCGTCATTTTTCTCAG ATCTGTTTTTATTGTCACTTCAAACAATTTTGTCTCTCTAAACATCAGTT TTTAAAAACCTACTCGACACGGTTTTAAAAGCATACATCAGTCAGTTCAC GAGAAAATCACAGAAGGTCAGTCCGGAAATTTTATGCTGAATTATTATCA TCTGACTTCCTTTTAATTTTTGTCTATTTCTCTTTAAAGCGAATAGATTA CAAGCAGAATCCATAGACAAGCTATTTTGGAAACAGGTATGTTGAGTTTT GTTCTTATAGATAGTACAACATGACATCCCGATATTTTGAAGTTGTCACG GATCACTTCTAATTATATAGGAAAGTTGGTTTCTTTGAAAACTTTTGTCA TCAGTCTTTTTCTTACAATCATTATCACTAAGACTTTGTGAAAAGTTAAA AAAATCTTTGGGTTAGTTTGTTGATGTATCAAAAGACAAGTGTAAAATGG ATCAAGTTCCACAAGTGAAATAAGAGATCGATCATTTCTCTTTAAGTAAA GAAAGCTCCACTCATAATCTGTCATTATAATCAAGAATATACTATTTTTT GCCGTCATCAAATAAGACTTATATCTCGATCAAAAGTATCAGTTTAAAAA GAACAGATGTCATTCCACACTTTGTTTCTCTAGGCTGATTATCATAGTAG AAGTCATCATGTGCCGTCATTTGGTTGTCTACATTTTGCTCGTTCTGGCT TCTCTCTACCGAAGCACACACTCAGCTGGTACTACACCTGGTATTAAAGA AGTCTTTGTTGGAAGATGTTGGCAATATCAAAGCATCTCTGAACATAACA AACTACCTGAATTAAAAGTGAACATAAACTGTACAAAATTATGGCTGGCT TTTTACGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTGGGGTAGATGA TTACAAGACGTTCTTTGATATGTTACATACCTCTCGAAAAATCAAGAATG CTTTGTTTTGGTCTGGTTTGCATGACTTGGTAACTGACTTCACCTTCATA AATGATGATTACATTGTACTGGAAGATACACTTACAGGGTAAGTTCTCCA TGTGTACCATTTGAACATCACTTTCAAAGAAAGATTTATCCTGTTAAAAC TGCCCATTCCCAATTAGCTCGTACAGCATCGCCCATTTTTCTGTTATTTT TTACGTGAAACTTTCAGGTACCTGCTAAACAATCTTAACTGGTGCGGTGG AACGGACGCAGATGGACTAAATTCAACATCTTGTTCGAAAACGTGCAACG TGATGACACCTGCTTGGACATTGGCATCTTCAGAGGTACGAGGTATGTTT TTACCATCGTAAACCTTTTCTTTGTAGTCTAAATAGAATAGTGCTCAGTA CGATTGGTACATGAAAAGGAAATTACGTCAAAAAGTTTTCAGCCAGTAAA TTGTCTTCGGATTTTTTTAGACTCTGGATGTTCGCTTACATTGAAAACCG ACATATTGTTAATTGGTTTTATTTTTATTAATCCTTTTTTCAGTTCGCTA AACGATCAACTGAAACAGCCAAAGTTCTCTTGAACGCGACACGTGCTAAC AACAAAGACGCATATGCTGATGGCAGGTTTGTCCGTTTTTCTTGTTCTTT ATCCGCAGAAATATTTGCTTTTGCTTACTACCATCGCAACAGACAGTCTC TGACCTCCTCAATCCTATTAACCCTGATTATCGGTTTCTACGTAGACAGC TCTATATGACGAGGCTTTTTGCCAAAGAGATTAAACTTTCATTATTTTTC ACTTTCGATTCTTGTTTCAGTTTCTTCCGAACTGTTGAAATGCCCGAACT GCAAGTGGATAAACTTGTCGTATATTTAGCTTCCAGTATTGGTAAAGAGG TCAGGTACGTATTCTTAATTTATTGAATTTTGACTTTCTTGGAATATATC CAGGAGTTGGTTGTAAAGGGAAGGGAAGGATTTTTAGAATTCTTTGTTTT GTCTCCATAGCATAGATCTCATTACACTTTAATTATTGGAAAATTAGTTT TTGCTACCCACAAAAGGAAATTGACCTCTCATTAAAACCCTTCATGAACA TTCAAAAAACAAATTATGAAAAGCCTTTATTTCTAAATTTTGCCATCTGT TGTAAGGTTATATAATGATCAGGCTTAATCAAATGACCAATCGACGTCAA TTTCTGAATGAATTTTCGCGATGCTAAACTGCTTCCTGTTTTGTATATAA TGTTAATTCAATTATTGAAAAAAATGAAAAAATCGATTTTATTAAGATTA AGCCTCTTTTGGCTTACGTTGTAAGGGGGAGGGCTTTGTGTTATTGCGAA ATCCTTAATCCCATGTTCGTTTGAGATTCTGTCGCTGAATCCTACAACTT CCTGTCTTCCAGAATAAAAAACAATACAACTTTTGAGGGTAGAACCGTTC ATTTTCTCTTCAATACTTGAAGTCACATCTTGCAGTATATGATGTAATAA AAGTTTGAATTCTTTCTCTCCAGGGAAAGATGTGCGGATTCGATTTCGAT GGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAAGTGGAATGTA TTGATCAACCAAGGTAAATGTCTGACGAACCTCTTTCTTGAGTGTTGAAA GCAAATACCTTTCCTCAATTTAACACCCTCTCTAACCTTAAGTACTTTGA AAGGTGTTCCTTGGTAATTTCATTCCATTACAAATATCATCTCTTGCTTT CTTAAAAAACTTTCATTCGAAAAGACTTCTATCTTTATTCTTTGGCCAGG AAATGTTTAGTAATTAATAAAGAACATTTTCGACATTTTTTCACTTCTTT CCTTCTTCTGACTGCCCATACATCATGTCTTTAATCGCAGATTTCCTTGC CAAGATTTGCAACTTCTCAATCGAAATCTTTAATGTATTTATAGTTTTCA AAGCGACAAAAGAATTTCTATAGCACATAATAACACCGACTTTATTGATA CTGAACTTTGGGAAGTCGGTTTTAACTATCACATTCACTTTCGATGGTTG TCTTACAAGCTTGTGAAAATCCTACTAAGTTTTTGAATATCTGTTAAGAT CGCTTCCCACTCTGCTTAAAGCTTTCTTCTACTAAATAATTAAGCATCGC ACGTTGTTCAACTACTAAAAAAGCTGATTGGAAAGCAAACTTTAGTAGTA ATTCTCCTAACGCCTAAAATTGAAAGGGACATTAACGTTTAAGTCTACCT GGAAATGCTATGAAATGATTTCATGAGAAAATCACTGAGGGCCACATTTA ATCGGATTTGCATATCCAAAAATACCCATGCCACTCTCGCATACCTCTCA GATCAACATTTTAAAGCTAACTGCACTCAAATGCCCTTATCCTATCCACT TTCAGCCTGGTACTCAATGTTTATTGTTTGAAGTACCCAAAAGCCAAAGA ATGTGTCAACAAGGATAACTTTCGAAGCGATTCAAACGCCGATAAAGAAG AAGCTAGGTAAGCAGTAAACCTTTTACGGGATTGACTTCTAAGGGCCCTT GCATACATCATCAATTTAGTAATTGAAACCGCTCTCACTCCCAACTTGGA CTACCTGCACATATTTGAAGTGTTTTTAAAGTGCCTGACTTGGACTGTTA TTCATATTACAACAATTAAAAGAGGAATTTCAAGAGTACTGTTAAACAAG TTTTGTCCTTGTTTAAACGTGTACCTCTTGACAATTCACGGAATTTAAAA GCAATCATTGATGATATGAAAGAATATATACCTTATTATGGTCCATTACA TGAATCTATCCCATTTTTGATCTCGCTTATCTATATGTCATGCAATTTCA TCATCTTATAAACGATTCAACTCAGGACATTGAAATTGGTGACCATCATT TTATCAATCACTCTCTTCGTTACCTTCCTGGGCTGTGTACTGTTGTTAGC CTTCCATCATCGTAAAACTATTCGCAAAAGAGCATTAAATCAGAAACATA ATAATAAGACCACAGACAATAACAATTCAAATGAACTTTTATCAAATGAA CCAAATGGAAAAACAATGTGGTTATAGTTTCATGTGGTGTTCATGACGCT GAGGTTATGCATGTCCTCCTCACAACCTGTGTCTTAACCTTCCCTAACCT CCATGCACCTTGTAGTTTACACTCGATTGTTCGAACCTACCCTGCCTGCC CTTTTTAGCATGTTCTGTTTGAAAATGATGTGAGATAGCGTTTCAAAGTC CCGTGCTAACTGGGAGAGGAAGAATCCCCTTCGCTATTTCTTTAATTTCA ATTTTTGAATCAACTCGCACTGGATTTTTTGAAGTTGAAAGATATTGATT TCGAAATCTGAAGCTAATGAAAGACTTTCCTTCCGTTTAATCATGCCCTT TATTTCTCAACCCTTTCTGGGTAAAAACATGGTCTATGGGGCATGGGTGT CAACGTAATGACGAGTGCATGAATCGGGCTGTGAAGCCCTCAGTTAATTG TTAATGCATTCATTTTCATTCATTGTTATGTATAGGAAGTGGATGATAGT TGGTATTGTGTTTTGCACACTGTTTGTTGTCTTCTCTCTCACTGCACTCA TTGCATGGATCCTCAAACATAAACAATCCAAACATCGAACTGCTGTCCAA ATGACCAAAAGTGGTGAAGTCATCGCTAACCCTCAAACCATTAACAACAA TGTCTAATTCCCTACCCCTAACTACTTACTCACACTCATAATATTCATTT TGGTGTAATTTTTATAATGATTTTGTATGGGAGGGTTTGATTTTTTACAA GGTTTTTTTATATTTTGATAATAAAATGGTGTTTGGTGTAAGTCTATCAA ATTATATTTTCATCCTTTCGAATTTCGAGTCGTTAGCTAATATCTTCCAT TCGTTCACTCAATATCGTGAACATCAGAAATTAGACAAATTTTTGCTTTA AAACATCGAGTTTAATGAAGCCAAAAAGTTGACTCCTGCACTTTTATTGT TGTTCAAAAAATGATGTCATTGTTGAGCTTATCAACAATCATCAAGCCTG ATAGCTTTCAAAAAGAGTCTTTTCCAAATATTGGTAAGGGAGGGAGAGAA AAAACAATCGGGGCTTGGTCAAGGAAGGCATATTGAATTAATTCCTAATC ATTAAACCCTGTGTGCATATTCAAAGTTAATTGAGTACTTATGATCGACT AACATAAACTTTTTGGGACTAATTTCTCACACAGGTTGTGGAAAACCGTT TGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTACATCACGAT CAGTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTACAAATATT CACATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACGATGAGGTA GAAAATAATAACGATATTGAACGTGTGGTGTGAGACCTGCTTTGTCATAA AAAGGAAAACTGCAACAGTATATTAACCTGAAGTTATGGTTAGTTTTTGG CAGGAGATGACAGGTGGAGGATGGAGGGTTCTACTTCGCGTCACTAAGCC CACCGCTGTATTCACCAGCCGTCAAAAGATATCTAAGAGAACAAGTGCTC TGTATTATATGACGGAACGAACACTTTTACCAAGAGACATTCAAGTTATG CAATGTTAATTATAATTTGATTCACAATTTTTCTGACAAAAGAAGAAACT GTGTATAAAGATATTTTAAATATCCGGGATTTCAGTTTATTCAAGCTTCT TTAAAGTATTGTAAAATTAGATGTACGATTTATTAAGGTAGAAATATTAA TGAAGATTTATGCTTGAAATATGTTTATTGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000669XLOC_000669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001253-exon-sc0000007-1575043694:1308774..1308978TCONS_00001253-exon-sc0000007-1575043694:1308774..1308978Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1308527..1308644TCONS_00001253-exon-sc0000007-1575043694:1308527..1308644Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1308320..1308402TCONS_00001253-exon-sc0000007-1575043694:1308320..1308402Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1307734..1307817TCONS_00001253-exon-sc0000007-1575043694:1307734..1307817Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1307310..1307399TCONS_00001253-exon-sc0000007-1575043694:1307310..1307399Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1306906..1307028TCONS_00001253-exon-sc0000007-1575043694:1306906..1307028Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1305489..1306466TCONS_00001253-exon-sc0000007-1575043694:1305489..1306466Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1302793..1302839TCONS_00001253-exon-sc0000007-1575043694:1302793..1302839Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1301991..1302395TCONS_00001253-exon-sc0000007-1575043694:1301991..1302395Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1301744..1301861TCONS_00001253-exon-sc0000007-1575043694:1301744..1301861Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1301453..1301535TCONS_00001253-exon-sc0000007-1575043694:1301453..1301535Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1301175..1301258TCONS_00001253-exon-sc0000007-1575043694:1301175..1301258Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1300466..1300555TCONS_00001253-exon-sc0000007-1575043694:1300466..1300555Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1299572..1299673TCONS_00001253-exon-sc0000007-1575043694:1299572..1299673Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1575043694:1297246..1298543TCONS_00001253-exon-sc0000007-1575043694:1297246..1298543Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1308774..1308978TCONS_00001253-exon-sc0000007-1510915933:1308774..1308978Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1308527..1308644TCONS_00001253-exon-sc0000007-1510915933:1308527..1308644Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1308320..1308402TCONS_00001253-exon-sc0000007-1510915933:1308320..1308402Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1307734..1307817TCONS_00001253-exon-sc0000007-1510915933:1307734..1307817Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1307310..1307399TCONS_00001253-exon-sc0000007-1510915933:1307310..1307399Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1306906..1307028TCONS_00001253-exon-sc0000007-1510915933:1306906..1307028Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1305489..1306466TCONS_00001253-exon-sc0000007-1510915933:1305489..1306466Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1302793..1302839TCONS_00001253-exon-sc0000007-1510915933:1302793..1302839Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1301991..1302395TCONS_00001253-exon-sc0000007-1510915933:1301991..1302395Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1301744..1301861TCONS_00001253-exon-sc0000007-1510915933:1301744..1301861Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1301453..1301535TCONS_00001253-exon-sc0000007-1510915933:1301453..1301535Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1301175..1301258TCONS_00001253-exon-sc0000007-1510915933:1301175..1301258Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1300466..1300555TCONS_00001253-exon-sc0000007-1510915933:1300466..1300555Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1299572..1299673TCONS_00001253-exon-sc0000007-1510915933:1299572..1299673Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1510915933:1297246..1298543TCONS_00001253-exon-sc0000007-1510915933:1297246..1298543Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1308774..1308978TCONS_00001253-exon-sc0000007-1491911889:1308774..1308978Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1308527..1308644TCONS_00001253-exon-sc0000007-1491911889:1308527..1308644Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1308320..1308402TCONS_00001253-exon-sc0000007-1491911889:1308320..1308402Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1307734..1307817TCONS_00001253-exon-sc0000007-1491911889:1307734..1307817Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1307310..1307399TCONS_00001253-exon-sc0000007-1491911889:1307310..1307399Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1306906..1307028TCONS_00001253-exon-sc0000007-1491911889:1306906..1307028Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1305489..1306466TCONS_00001253-exon-sc0000007-1491911889:1305489..1306466Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1302793..1302839TCONS_00001253-exon-sc0000007-1491911889:1302793..1302839Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1301991..1302395TCONS_00001253-exon-sc0000007-1491911889:1301991..1302395Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1301744..1301861TCONS_00001253-exon-sc0000007-1491911889:1301744..1301861Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1301453..1301535TCONS_00001253-exon-sc0000007-1491911889:1301453..1301535Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1301175..1301258TCONS_00001253-exon-sc0000007-1491911889:1301175..1301258Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1300466..1300555TCONS_00001253-exon-sc0000007-1491911889:1300466..1300555Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1299572..1299673TCONS_00001253-exon-sc0000007-1491911889:1299572..1299673Clytia hemisphaericaexon
TCONS_00001253-exon-sc0000007-1491911889:1297246..1298543TCONS_00001253-exon-sc0000007-1491911889:1297246..1298543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1297246..1308978 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0.667703 7.96896e-08 0 0 0 1.30879e-09 0 0 0 0 0 0 0 0 0 0 8.16304e-08 0 0 0.426632 0
Blast
BLAST of TCONS_00001253 vs. Swiss-Prot (Human)
Match: CD38 (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Homo sapiens GN=CD38 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.438e-27
Identity = 79/260 (30.38%), Postives = 125/260 (48.08%), Query Frame = 2
Query: 1817 SAGTTPGIKEVFVGRCWQYQSISEHNKLPELKVNINCTKLWLAFYDSFAFKDPCTVGVDDYKTFFDMLHTSRKIKNALFWSGLHDLVTDFTFINDDYIVLEDTLTGYLLNNLNWCGGTDADGLNSTSCS---KTC--NVMTPAWTLASSEFAKRSTETAKVLLNATRANNKDAYADGSFFRTVEMPELQVDKLVVYLASSI--GKE-VRERCADSISMENIRADAEAKNIQVEC--IDQPSLVLNVYCLKYPKAKECVNK 2566
              GTT    E  + RC +Y  I      PE++ +++C  +W AF  +F  K PC +  +DY+    +   +      L WS + DL   FT +  D   LEDTL GYL ++L WCG  +   +N  SC    K C  N ++  W   S  FA+ + +   V+LN +R+     +   S F +VE+  LQ +K+    A  I  G+E  R+ C D  +++ + +    +NIQ  C  I +P   L   C+K P+   C ++
Sbjct:   52 GPGTTKRFPETVLARCVKYTEIH-----PEMR-HVDCQSVWDAFKGAFISKHPCNITEEDYQPLMKLGTQTVPCNKILLWSRIKDLAHQFTQVQRDMFTLEDTLLGYLADDLTWCGEFNTSKINYQSCPDWRKDCSNNPVSVFWKTVSRRFAEAACDVVHVMLNGSRSK---IFDKNSTFGSVEVHNLQPEKVQTLEAWVIHGGREDSRDLCQDP-TIKELESIISKRNIQFSCKNIYRPDKFLQ--CVKNPEDSSCTSE 299          

HSP 2 Score: 97.0561 bits (240), Expect = 2.629e-21
Identity = 68/219 (31.05%), Postives = 102/219 (46.58%), Query Frame = 3
Query:    6 LWLAFYDSFAFKDPCTVGVDDYKTFFYMLHTSRKIKNALFWSGMHDLVTDFTFINDDYIVIGDTLTGYLLNNLNWCGGTDADGLNSTSCP---KTC--NVMTPAWTLASSEFAKQATGVSKVLLNATRANNKDAYADGSFFRTVEMPELQVDKLVVYLASSI--GKE-VRETCNDSISMENIRKDAESRNIAIECFD--QPSLVLNVFCLKYPAAKECV 632
            +W AF  +F  K PC +  +DY+    +   +      L WS + DL   FT +  D   + DTL GYL ++L WCG  +   +N  SCP   K C  N ++  W   S  FA+ A  V  V+LN +R+     +   S F +VE+  LQ +K+    A  I  G+E  R+ C D  +++ +      RNI   C +  +P   L   C+K P    C 
Sbjct:   85 VWDAFKGAFISKHPCNITEEDYQPLMKLGTQTVPCNKILLWSRIKDLAHQFTQVQRDMFTLEDTLLGYLADDLTWCGEFNTSKINYQSCPDWRKDCSNNPVSVFWKTVSRRFAEAACDVVHVMLNGSRSK---IFDKNSTFGSVEVHNLQPEKVQTLEAWVIHGGREDSRDLCQDP-TIKELESIISKRNIQFSCKNIYRPDKFLQ--CVKNPEDSSCT 297          
The following BLAST results are available for this feature:
BLAST of TCONS_00001253 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD389.438e-2730.38ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 ... [more]
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