TCONS_00001213 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001213
Unique NameTCONS_00001213
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2625

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001213 ID=TCONS_00001213|Name=TCONS_00001213|organism=Clytia hemisphaerica|type=transcript|length=2625bp
GAGCttgaaccattgagtttcaagcccgaagggctagaggtcaatctctt
tggtaggatttgaagccaacaaatcctaccaaagttgcgcggccttgagc
gacccgcctggtttttacacaaatgacaggttgaaactaaaatttaacgc
ttaatttcgaaaaatatatcactcgaagacaaaggaattgctagattcaa
tccgtcatcaaaaatacggcgcatattttaaggcttcaatttttcttccc
tgagaaaggttagagattgacctctagcccttcgggcttgaaactcaatg
gcttGAACTACTACACTGAAACGAAATTAATATTTCACTGTCATGACAAC
GGGGCATTTATTTACATTCCCGATATTCTAAATCTCTACTGCGCACGCGC
ATGTTTTgatttgtgcttgattcaaaaTGTCTGACAtcactttgcaaaat
attagaCAAGATGTCATAAAATCTCGCAATTTGTAATGATTTGATGGTAA
TGGAGAAATCACAGTCTAATTGCAAGTGAAGATAACACAGAGATGAACAC
AGATATCGATCAACACATTTTGGTGAGGTATGAAATAAAGAAAAGACTTG
GAAAAGGGGCGTATGGTATTGTTTGGAAAGGTATTGACAGAAAAACTGGT
GAAATAGTTgcattaaaaaagatttttgatgcTTTTCGAAATCAAACGGA
TGCACAGAGAACATTTAGAGAGATATGCTTCTTGCAGGAATTTGGAAGTC
ATGACAATGTTATTAAACTGTTGAATGTGATAAAAGCTGACAATGATAAA
GACATTTACTTGGTGTTCGAATTTATGGACACTGACTTGCATAATGTTAT
CAAGAAAGGCAACATTCTGAAAGATGTGCACAAACGGTACATTATGTATC
AGCTAATGAAAGCAATCAATTTCATTCACTCTGGCAATGTAATCCACAGG
GATCTGAAGCCAAGCAACGTTTTACTGGATAGAGAATGTTTTATTAAAGT
ATGCGACTTTGGACTTGCGCGTTCTGTACAATGTTTAACCCTGGAACATG
GGGATCCAAGTTTGACAGATTACGTTGCAACACGTTGGTACCGAGCACCC
GAAATCCTCCTAGCTTCACCAAAATATACGAAAGGAGTGGACATGTGGTC
GATGGGGTGTATCCTGGGTGAAATGTTGCTCGGGAAACCCCTCTTCCCTG
GATCCTCAACTCTCAATCAAATCGAACGAATTATGGCCGTTATACCAACC
CCAAGTAGACAAGACATCGATAGTATCAAATCATCATACAGCACCTCACT
ACTCGACAAAGCAACCATGAGATCGCGTAAAAATCTACCGGACCTTTTCC
CGGATGCACCCAATGATGCACTTGATATGGTTCAATCACTTTTACAATTT
AATCCGGACAAACGAATGACAGCGGAAGAAGCTTTAGCACATCCGTACCT
AGCGAAATTCCATAACCCTGCAGAAGAGCATAGTCTGACGTATGACGTAG
TCCCACCAGTTGATGACGATGTTCAACTGTCTGTCGCTGAATATCGAACC
AAACTATACGATAGCATCATGCAAAAGAAGTTGGACATTCGAAGGCAGCG
ACGAACGctggaaagtgaagaaaaacctGCCTCAGCTTCAGGCGGGGTGG
GTTCACCAAAGGTTGGTGCGGTCCGCTCACAAGCCGCTCTTGCTAAAGCT
TCGTCCTCCTCACCGAGTCATAAAGCTGTTCGGACCACCAAATCTGCACC
AACAAAGAATGCACGTACACCGGCCGATCAACAGgTGGCGCACCAGAGAC
CAGGACAATATTCTTCTCCGAAGGTTCAACGAGTGGCCGGCAAAAAGCCC
TCTTCAACGCAGGCAACGTCAGGTCTAACCATGTCAAGTTACACGCAAAG
TCACGCCTCTGTCAGTAAAAGTACACTGGATGCAATCCATGGACTGTCAA
TCAAATAGGGCTGTTGAAATAATGACAAACAATCTATTATAATGCACTTA
TTGAAATGAAACGGAAAAAAGTTTCCCCGAAAAGTCAATGAGTACGAGAA
TATTTAGTCCGCACTTTATTGTCAGAACCNCTTCTTCCGAAAAGTCAATG
AGTACGAGAATATTAAGTCCACCCTTTATTGTCAGAACCTTAAAATTGAC
GATTCTTCGTAAGATTCTTAGTTTTctttgaaacatttttgtaaaGTCTT
TATCTGCGACATTTTACTTCGAATTTAGTCTTTTTCAACCAGAGTTAGGG
TCTTGACTTAAAATGATTTTAACAGAAAATAAAGgggagaaaattgaaaa
tatttaagttaAATTATACTCagtagagaaatctattttgatgtttttgt
gtAAATGCGCGTATTGTATcataaattttttgtcaattttttagaTGTAA
TATTACATTAGtagagaaatttttatttcatggcttttaattcaattttt
taagaaagtcTTCGAAGACAAACATTTCAGTCGAATTTCCACACGTACAA
CGTTTCAAGGTCTCATTGATGGAGGTCCCTGAAACTCAATTTTTAGATGT
TGTTAGAAATCAAAATGTATAGAAAGTTTTTGTACATGCATTTTAATTTT
ATGCTCAAGAAATACAAActtcaaa
Run BLAST on NCBI

transcript from alignment at sc0000007:1086988..1097129-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001213 ID=TCONS_00001213|Name=TCONS_00001213|organism=Clytia hemisphaerica|type=transcript|length=10142bp|location=Sequence derived from alignment at sc0000007:1086988..1097129- (Clytia hemisphaerica)
GAGCTTGAACCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCAATCTCTT
TGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGC
GACCCGCCTGGTTTTTACACAAATGACAGGTTGAAACTAAAATTTAACGC
TTAATTTCGAAAAATATATCACTCGAAGACAAAGGAATTGCTAGATTCAA
TCCGTCATCAAAAATACGGCGCATATTTTAAGGCTTCAATTTTTCTTCCC
TGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATG
GCTTGAACTACTACACTGAAACGAAATTAATATTTCACTGTCATGACAAC
GGGGCATTTATTTACATTCCCGATATTCTAAATCTCTACTGCGCACGCGC
ATGTTTTGATTTGTGCTTGATTCAAAATGTCTGACATCACTTTGCAAAAT
ATTAGACAAGATGTCATAAAATCTCGCAATTTGTAATGATTTGATGGTAA
TGGAGAAATCACAGTCTAATTGCAAGTGAAGATAACACAGAGATGAACAC
AGATATCGATCAACACATTTTGGTGAGGTATGAAATAAAGAAAAGACTTG
GAAAAGGGGTACGTTTTTCTCTGCTGAAGCCTTCATATTTACCTTTTTTT
TCTAGCTTTGTTTATCTTTGATCTTGTATTGAATTTTAGGACACCAAACT
TTTTTCTCGTTTGTTTTCACGAAGTTATTTCTTTTTCTTTCTGACTGATC
ATTACCGTAAGTTGGTCTAATATCGACATCCCTCGTCTAATTCCGACACC
CTTCTTTAGTTTAGAGACAGGAATTATATGAAAGCTTGAATCACTGCATT
GCTGATTGAAAAAGGATTATTCCTCTCTGACCCACTAAGCAAGGAAAAAC
AGTTTCAACCTTTCAATCAATTTCAGCTGATAAATAGGGTGTCAGAATTA
GAGGAGGGGTGTCGACATTAGACCAAGTTACGGTATATTTTTGTTGTGTT
ACTTTTGACAGTAAGGTGATTTCCAGACAATATCTGGTCCTTTAAATGTT
TATCAGTAAGACCTTCTGAGTAAGCTGGTTAAAAAAATAACTCTAACTAC
ATTGTAGACCAGTAATTTTGTGAGCGTAGTGCAAGAATGACTTTGAGCAG
GAGGTTTGGGGGAATTTTAAGGCCTAACAAGTGGGAGTTCAGGGCCCAGC
GCAGCGCTCTCTTACAAAATTTTGGAGTCTGAAATGACCCTAAACTTTGC
TAAACACCTGTTTTGATTTAATGAAAAACAACTAAAGAAATGTAAAAATA
CTTAAAAAGCCTATAAAGCCTACCGTGAAGTCGGGTAACATGTTAGCCTC
CACTGATGCAAGTTGGTATAGCCTTCAAGTTTTACCCTGACCAAGTTAAA
AGTACCGTAAGTTAGTCTAATTTCAACATCCTTTTTTAGAGATAGGAATG
ATAGAAAAGTTGGGATCAATGATGACTCCTCAACTGATTGCTAAGCAAAG
AAAATTAGTTTAATCAGCGATTTCGGACCATCCTATCATTCCTATCTCTA
AAGAAGGGTGACAAAATTAGAAGAGGGATGTCAACATTAGACCAACTTAC
GGTAAGCTTCAGAATGACCAGCGGCTATTTACTTCAGGCGGGGATGGTAC
AAAGTTAAGCTATGGTAAACTTGAATCGCTCAATAATCGCACAGAAATCA
CCCCCGTGTAAAGCTAACAGATCTGAAAATACGACGCTAGATTTTAGATG
CAGATATCTGTGTTGTAGAGCGCGAGTGAGCGCGTGTACACTGGCGCGTG
TTTAACTATAGAATTTATTTCATATTTCAATTTAAAAGCCTACTCGGTGC
GGAAGAGAAATCGTGTATTTTTTAATACGCGGTTCATTAACTCAAATCAA
ATGACTTTGGAGGTTCAGTGAAATGGTGGCTGAATTGCCATCCCATGTTT
TGTCAGATAGTCCCAAGTTAGAGCAGTTGACGGTAATAGAAAACCAGAAT
GCGGATCTTCTATAAATATTAACTATAGTAATGAAAACTGTAATGTGCAC
TCTCAAACATCAATTGATGACAGATGGTACAAAATTTAATAAAGGAACTG
TCATTATTTGATAATCGAACAGAAGATTTTCTGTCAAGAATCTTGTAAAC
ATTCAAACAAATTCCATAAAGATTATCTGTTGTAGCTAAATCAAAATGCT
ACCATTTAACAAACATACCAGGTGCGCCACAAAAAATTTTCTCTCTTTGA
AACTAATTTTCAAGAAATCTAAAAATTTTAAAAGAGCCATTCCTATTTCA
TTGGAAAGAAGAAAGATAAACATAAATTTTGATGGGTCATTTATTAAATT
CGATTCACTAGATCAAAAGTTATGCTCAATTGAATGAAAAACTTACTTTC
GGGATGTGCTCAAAAACGTTGAAAATCGACTTATCAAATTAAACAGAAGC
ATAATTACATGATACATCAGTACTTTCGTTTCAGTCATTAAAAATGATAA
TAAGCTGTCTAAATGACCTTTTGTTATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAAATTTGGCAAATTTTTAGCAGGGGACC
ACCCTTTTTTGCAGTTAGTACATCTGAGTACTAAGTGATTTTATCCAATT
CATATGGCACACCACCACGGTACTAATTGGCATGATGTCTTGTACTAACT
GCTTCACCCCCCCTGGTTTTAAGGTAGATCCAGTCTTACTTAGACTTCAT
CCAGTCGAGAACCAAAAATCTGAGGAAAATTTCGGTAAAAGTAAATTAAA
TTGATTTTGATGAAGATTTTAAACAGTTTTAAACCCTTTCGACCCTTCAG
TTTCAAAATTTATGTGTTTATTTACTGAGAAATGCTCTTAATCATGTAAA
GGCTATTGCGATTGCCAGATTTAAAATAAAAAATTGATAGGTCGATTTTT
AACATTTTCTTATCCAATTGAGCATAACTTTTGATCTAATGAATCAAATT
TAATAAATGACCCATGAAAATTTAAGTCTATCTTTCTTCTTTCCAATGAA
ATAGGAATGGCTCTTTTGAAAGTTTTAGATTTTGAGAAAATTAGTTTTAA
AGAGAGAAACTTTTTTGTGGCGCACCCGGTATGCGCNATTTAATAAATGA
CCCATGAAAGTTTAAGTCTATCTTTCTTCTTTCCAATGAAATAGGAATGG
CTCTTTTGAAAGTTTTAGATTTTGAGAAAATTAGTTTTAAAGAGAGAAAC
TTTTTTGTGGCGCACCCGGTATGCGCTGTTCCAGGATTGATCCCATTAAA
TAAAGCCACACCCACAAAAACACCAGCAAACAGCCTTAAAGGTTGACAAA
TTTTAATCTGTCAATCAATTTCTCAAGTAAAGAGTACACAGATTAAACAA
ATAATATGATAACAATAAGGTTTTAATACAGAAATACCAAATTAAATTGG
ACATCTAAAATGCTATTCACAATTTTAAAATGCCCATTCACAGAGTTTTT
TAGCTGCTAACTAAGAAAACAAAAGAGCCATCTGGGTGGATTTCCCTTTA
ACGTTAAAAGCTATGAACTTTGAACAAATCGTGAACATACTAAGGACACT
TGTGTTGATTTCCAATTTTGTCAATGTTTTGCAAATAGAACAAAGGTAAC
AATTGTAATTGATATTTATTCGCATCTATCTCATATATTTGGTTGATTTA
CAGCAGGTTGTTCAGCCTATCCTCACAGCTGCTAGTACAATTAAGTCATG
TAAGCAAATGCTTAATAAACATTGCAATTTTTAATTTCTTAGCAATAAAC
CTTGGATATTTGGCAAAAGTAAAACTGAGCTTTATTTAGCTGCAACAATA
AATTCTCTAATTCCTGTCATAGTGTCAAATATATTTAGCAGATTAGTGCG
CCTCATTAAAAAATTTTCTGTCTTGTCTTCTGCATGGCATAATATCCGAG
TCTCAAAATTAAAAAAAAAATTACCTCAGCCATATAATAATGTAAAATTA
CACATCTTGATGTACCCAAACAATTTTGTATCCCTTTGATTTGAAAGGGG
GAATTCACTGTATGTTTCCTCTCTTGAAACCACTAAGATTATTGGCAAAA
TTTTAAACTTTAAGTTGTGAAAAAATGGCCATCATGTTTTCACATTTTTT
AAATCCTCCAGCGGACCTGATAGTATTGGATTCATTTTTTGATAAATCTA
ATAATTTCCTGAAATTACCTTTATCTTGTTTGTTGACTGATAGCATTTTT
TATTTTGTTTGTAATAATGTATTTTTTACATTCAAAGCACATTAACTTGT
ATACACAAATAACCCCATAAAGAACTTGTTTAGAATTTACCAGGAAGGTA
TGACGTCAAATGTCTATATCTGTAAGAAAATCCATACAACTACTTCAGGC
ATTCAATCTCAATCCTTCCTGGTAATCTCAGTCTGTCTGGTCGTTGATGT
TCACCAATTTGTTACAATTCTTTTTCAGGCGTATGGTATTGTTTGGAAAG
GTATTGACAGAAAAACTGGTGAAATAGTTGCATTAAAAAAGATTTTTGAT
GCTTTTCGAAATCAAACGGATGCACAGGTTCGTTTTACTTTTCATCTTCT
GCATATTCTGTATTTTATTAGGCTGTTAATTCTGAAGGTATCCAAGTAAT
TGGCACCAGCTTTATTTTGTTTCAATCCTATTTCACAGTTCTGTCATTGT
TTTCTTTTCACAGAGAACATTTAGAGAGATATGCTTCTTGCAGGTAAGTT
AATTTCTATTTCTATTTCATAATTAGTAGCTTTTCTGCATTTTGAAACAT
ATGTAGTTAGTAGTATTTTTAATTTGTTGTTGAATCTTTTTTCAAAACCA
TCATCACGATCGAATTGTGGTATATATCAAACTTCATTACATGCATTACA
TTACATTACATTTACTTGGATGTCTAGAAGATTTGCTCGATATTGCTACT
CAATATTAAAACATTGTTGTTCTGTTTAGGAATTTGGAAGTCATGACAAT
GTTATTAAACTGTTGAATGTGATAAAAGCTGACAATGATAAAGACATTTA
CTTGGTGTTCGAATTTATGGGTAAGTGCTTTCATTGATTATCAATAATTT
TATCAATCGACCATGTATATTTTTTGTTTTGATAAATTTGGCCCTGTATG
AAATTTGGTTTTTGATATTTTTAATTTTTCATTTCTCAGACACTGACTTG
CATAATGTTATCAAGAAAGGCAACATTCTGAAAGATGTGCACAAACGGTA
CATTATGTATCAGGTATGTAAATCTCATCTGAACGTTTCCAAAATATAAG
GGAAGGACATGTTATTAATGGGATCTCAATCTTATACAAGTCATGTTTCA
AAATGATGGGTTTATGTTCATGTTTATGTTCATGTTTTATGCTCATTTTT
TCTAGCTAATGAAAGCAATCAATTTCATTCACTCTGGCAATGTAATCCAC
AGGGATCTGAAGGTATACTTTTTTCTAAGGTCTTTTCGCATTTTTCCTGT
CGGTTTCTTTTAAATGTGTATAATAAAAAAATGATTTTTCAATTATTTAT
CTGATTCAACAAACTATCAATAAAATATGACGTCAATTGATCAATTTTGC
AAGTATTTTTCTCACATACAAAAATGTACTGAATAGTCGATTGAGTGGAA
ATAAACCGTACTGTTTATTTATTTATTTACTTTCAGCCAAGCAACGTTTT
ACTGGATAGAGAATGTTTTATTAAAGTAAGAGCAAATTTTTTTATTCCAT
TCAATTCAAACCCAACTCTTCCTTGTTGCAAACTTCTGCAAAAATTCCAT
GATCTGTAAATATTTTTTAAAAACAAAGTCATAGAGTGTAAGAATTACAC
TTTTTGTGACGGATTTCCCTAAAGTTCCTTGAAATTCTTATCGGAAGNCT
TAAAAACAAGAGTGTAAGAATTACACTTTTTGTGACGGATTTCCCTAAAG
TTCCTTGAAATTCTTTTCGGAAGAAATATCTGAAACGTTTCCATTTCTTT
AAAAATGAAAATAACATTGGGGCGTGACCCCCTTCCGATTAGTGCTATAC
TTAGCACAACAAAAATGCCCCTAGGTTTCTCACGCTTCACCCCAAGTTTT
AGGCTGCCTAGGTTCTTCGCCTTGTCTATTTAAGTGATTGAAACTCGCAC
ATCCTTTCCTACACACTTTATTAACATTTTATTCTGTTAAAGGTATGCGA
CTTTGGACTTGCGCGTTCTGTACAATGTTTAACCCTGGAACATGGGGATC
CAAGTTTGACAGATTACGTTGCAACACGTTGGTACCGAGCACCCGAAATC
CTCCTAGCTTCACCAAAGTAAGGGGATCTATTTCACCCAAAGTCATTAGT
TTACTATCTTGACTGAAACCTATGAGGTTAACTAACTAACTAACAAGACC
CTTTTTGGAAATATTTATGTATAAAATGTTGTAAAAATGCAATTGTTTTG
AACTAATAAGACTGATGAGTTTGCTTCAAAATGTGTTTAGAAGGTTGCAG
AAATCAGCAGAAATAGGTAAAAATTGCTGATATTGAAAGGGCCCACCATG
ATAGTTGGGAAGAGCAATCAAATATCACCAAAATATTATAATTTCTCTTA
TTATCGTCTAGATATACGAAAGGAGTGGACATGTGGTCGATGGGGTGTAT
CCTGGGTGAAATGTTGCTCGGGAAACCCCTCTTCCCTGGATCCTCAACTC
TCAATCAAATCGAACGAATTATGGCCGTTATACCAACCCCAAGTAGACAA
GGTTGGTATTTCCTTTGATATCATTTGTATCTGGTAGTTTATAAACTTAG
AAAGTTTACATGTTGTATAGTGTATGTAGCACTGAGCTCAAAGACTGAAA
TACTCTCAATTCCATTGATCAATAGTTTTTAATAGAGATTATAATGCAAC
ATTTATCTCCCTTTAGACATCGATAGTATCAAATCATCATACAGCACCTC
ACTACTCGACAAAGCAACCATGAGATCGCGTAAAAATCTACCGGACCTTT
TCCCGGATGCACCCAATGATGCACTTGATATGGTTCAATCACTTTTACAA
TTTAATCCGGACAAACGAATGACAGCGGAAGAAGCTTTAGCACATCCGTA
CCTAGCGAAATTCCATAACCCTGCAGAAGAGCATAGTCTGACGTATGACG
TAGTCCCACCAGTTGATGACGATGTTCAACTGTCTGTCGCTGAATATCGA
ACCAAACTATACGATGTATGTATGATTATGTTGTTTCTAAAACTATGAGA
AATTTTGAGTTTGCCAGAATAATTTACTAATAAAAGTGAAGACAAGAAAC
TTAATTCTATTCATCTTGGCTTTTTGATGATTTCGATTTTGCTTTTAGAA
AAGATGAGTTGAGTTTGAGCAAGTTTCGAATCTCCATAAAGTAAATAATT
CACACAACTCTTGTCTATTTTCAGAGCATCATGCAAAAGAAGTTGGACAT
TCGAAGGCAGCGACGAACGCTGGAAAGTGAAGAAAAACCTGCCTCAGCTT
CAGGCGGGGTGGGTTCACCAAAGGTTGGTGCGGTCCGCTCACAAGCCGCT
CTTGCTAAAGCTTCGTCCTCCTCACCGAGTCATAAAGCTGTTCGGACCAC
CAAATCTGCACCAACAAAGAATGCACGTACACCGGCCGATCAACAGGTAT
TTATGGTCTTCCTCTAAAACCTTGAATTCAATGCACTTTCAACATTTAAN
GCCGAGTCATAAAGCTGTTCGAACCACCAAATCTGCACCAACAAAGAATG
CACGTACACCGGCCGATCAACAGGTATTTATGGTCTTCCTCTAAAACCTT
GAATTCAATGCACTTTCAACATTTAATGATCCATCACCATCAGACATCCA
TACATGATTACTGTTCACAACCTCATACATTCCACCTTTTCCGTCCACAC
ACATTTCTAATAAAATTGACCCTTCTCTCTTTTCCTTTTGTAGACTTACA
AATCCAGCCCTTCCAACATGCGTTCTCGTCCTATCTCATCACAGTATGAT
AGAAAAGCTAATAATAATATCCTGACGCGCCCAGATAACAATTTACAGAT
TACCAGTACCTCCAAAGTAAGACATTTTTTGTAATTCCTTCCCTTTCACA
ACCCTTGTTCCAATTCACCCATCCTCCCCATGTCATCGACAATGTTTTAT
GACGGCTGACACTTATGTGTAAAGGAAAGACCAGAACAATTTGCCATCCT
TTTGTTTAATGGATTCATCAAACTCCTCAAAGCCTCTTTTCATAATTCTT
GCAAGTCAGTTTTCCATGGTATAAGGCTCTAACAGTCAGTATGGATTTAC
TCATTCGAGTGTGAAACTTTTCGATCTGAATAACTTTTTTGTTTTCATTA
GGTGGCGCACCAGAGACCAGGACAATATTCTTCTCCGAAGGTTCAACGAG
TGGCCGGCAAAAAGCCCTCTTCAACGCAGGCAACGTCAGGTCTAACCATG
TCAAGTTACACGCAAAGTCACGCCTCTGTCAGTAAAAGTACACTGGATGC
AATCCATGGACTGTCAATCAAATAGGGCTGTTGAAATAATGACAAACAAT
CTATTATAATGCACTTATTGAAATGAAACGGAAAAAAGTTTCCCCGAAAA
GTCAATGAGTACGAGAATATTTAGTCCGCACTTTATTGTCAGAACCNCTT
CTTCCGAAAAGTCAATGAGTACGAGAATATTAAGTCCACCCTTTATTGTC
AGAACCTTAAAATTGACGATTCTTCGTAAGATTCTTAGTTTTCTTTGAAA
CATTTTTGTAAAGTCTTTATCTGCGACATTTTACTTCGAATTTAGTCTTT
TTCAACCAGAGTTAGGGTCTTGACTTAAAATGATTTTAACAGAAAATAAA
GGGGAGAAAATTGAAAATATTTAAGTTAAATTATACTCAGTAGAGAAATC
TATTTTGATGTTTTTGTGTAAATGCGCGTATTGTATCATAAATTTTTTGT
CAATTTTTTAGATGTAATATTACATTAGTAGAGAAATTTTTATTTCATGG
CTTTTAATTCAATTTTTTAAGAAAGTCTTCGAAGACAAACATTTCAGTCG
AATTTCCACACGTACAACGTTTCAAGGTCTCATTGATGGAGGTCCCTGAA
ACTCAATTTTTAGATGTTGTTAGAAATCAAAATGTATAGAAAGTTTTTGT
ACATGCATTTTAATTTTATGCTCAAGAAATACAAACTTCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000658XLOC_000658Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001213-exon-sc0000007-1575043694:1096522..1097129TCONS_00001213-exon-sc0000007-1575043694:1096522..1097129Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1091603..1091701TCONS_00001213-exon-sc0000007-1575043694:1091603..1091701Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1091437..1091466TCONS_00001213-exon-sc0000007-1575043694:1091437..1091466Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1091110..1091200TCONS_00001213-exon-sc0000007-1575043694:1091110..1091200Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1090917..1090990TCONS_00001213-exon-sc0000007-1575043694:1090917..1090990Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1090718..1090774TCONS_00001213-exon-sc0000007-1575043694:1090718..1090774Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1090455..1090493TCONS_00001213-exon-sc0000007-1575043694:1090455..1090493Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1089863..1089987TCONS_00001213-exon-sc0000007-1575043694:1089863..1089987Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1089429..1089568TCONS_00001213-exon-sc0000007-1575043694:1089429..1089568Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1088965..1089263TCONS_00001213-exon-sc0000007-1575043694:1088965..1089263Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1088534..1088755TCONS_00001213-exon-sc0000007-1575043694:1088534..1088755Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1575043694:1086988..1087828TCONS_00001213-exon-sc0000007-1575043694:1086988..1087828Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1096522..1097129TCONS_00001213-exon-sc0000007-1510915933:1096522..1097129Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1091603..1091701TCONS_00001213-exon-sc0000007-1510915933:1091603..1091701Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1091437..1091466TCONS_00001213-exon-sc0000007-1510915933:1091437..1091466Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1091110..1091200TCONS_00001213-exon-sc0000007-1510915933:1091110..1091200Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1090917..1090990TCONS_00001213-exon-sc0000007-1510915933:1090917..1090990Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1090718..1090774TCONS_00001213-exon-sc0000007-1510915933:1090718..1090774Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1090455..1090493TCONS_00001213-exon-sc0000007-1510915933:1090455..1090493Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1089863..1089987TCONS_00001213-exon-sc0000007-1510915933:1089863..1089987Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1089429..1089568TCONS_00001213-exon-sc0000007-1510915933:1089429..1089568Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1088965..1089263TCONS_00001213-exon-sc0000007-1510915933:1088965..1089263Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1088534..1088755TCONS_00001213-exon-sc0000007-1510915933:1088534..1088755Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1510915933:1086988..1087828TCONS_00001213-exon-sc0000007-1510915933:1086988..1087828Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1096522..1097129TCONS_00001213-exon-sc0000007-1491911889:1096522..1097129Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1091603..1091701TCONS_00001213-exon-sc0000007-1491911889:1091603..1091701Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1091437..1091466TCONS_00001213-exon-sc0000007-1491911889:1091437..1091466Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1091110..1091200TCONS_00001213-exon-sc0000007-1491911889:1091110..1091200Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1090917..1090990TCONS_00001213-exon-sc0000007-1491911889:1090917..1090990Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1090718..1090774TCONS_00001213-exon-sc0000007-1491911889:1090718..1090774Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1090455..1090493TCONS_00001213-exon-sc0000007-1491911889:1090455..1090493Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1089863..1089987TCONS_00001213-exon-sc0000007-1491911889:1089863..1089987Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1089429..1089568TCONS_00001213-exon-sc0000007-1491911889:1089429..1089568Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1088965..1089263TCONS_00001213-exon-sc0000007-1491911889:1088965..1089263Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1088534..1088755TCONS_00001213-exon-sc0000007-1491911889:1088534..1088755Clytia hemisphaericaexon
TCONS_00001213-exon-sc0000007-1491911889:1086988..1087828TCONS_00001213-exon-sc0000007-1491911889:1086988..1087828Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1086988..1097129 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.95843e-08	9.09993e-07	1.31119	5.7115e-08	5.97706	6.80658	1.0149	1.68407	0.999665	1.97944	1.04155	1.77933	15.749	14.0632	6.20045	7.53514	5.66691	4.51691	13.7972	12.331	8.34931	9.63253	6.47533	7.19969	6.59209	5.401	2.68684	1.11065	1.7516e-06	0.00039717
Blast
[Close]
BLAST of TCONS_00001213 vs. Swiss-Prot (Human)
Match: MK15 (Mitogen-activated protein kinase 15 OS=Homo sapiens GN=MAPK15 PE=1 SV=1)

HSP 1 Score: 426.402 bits (1095), Expect = 2.708e-138
Identity = 201/345 (58.26%), Postives = 268/345 (77.68%), Query Frame = 3 
Query:  543 MNTDIDQHILVRYEIKKRLGKGAYGIVWKGIDRKTGEIVALKKIFDAFRNQTDAQRTFREICFLQEFGSHDNVIKLLNVIKADNDKDIYLVFEFMDTDLHNVIKKGNILKDVHKRYIMYQLMKAINFIHSGNVIHRDLKPSNVLLDRECFIKVCDFGLARSVQCLTLEHGDPSLTDYVATRWYRAPEILLASPKYTKGVDMWSMGCILGEMLLGKPLFPGSSTLNQIERIMAVIPTPSRQDIDSIKSSYSTSLLDKATMRSRKNLPDLF-PDAPNDALDMVQSLLQFNPDKRMTAEEALAHPYLAKFHNPAEEHSLTYXXXXXXXXXXQLSVAEYRTKLYDSIMQ 1574
            M T +D  I+ RY ++++LG+GAYGIVWK +DR+TGE+VA+KKIFDAFR++TDAQRTFREI  LQEFG H N+I LL+VI+A+ND+DIYLVFEFMDTDL+ VI+KG +L+DVH R I YQL++A  F+HSG+V+HRD KPSNVLLD  C +K+CDFGLARS+  L     D ++T+YVATRWYRAPE+LL+S +YT GVDMWS+GCILGEML G+PLFPG+STL+Q+E I+  IP PS +D+ ++ S    S+L +   R R+ L  L  PD   +ALD+++ LL F PDKR++A +AL HPY+ +FH P++E +   DV P   + VQLSV EYR+++Y  I++
Sbjct:    1 MCTVVDPRIVRRYLLRRQLGQGAYGIVWKAVDRRTGEVVAIKKIFDAFRDKTDAQRTFREITLLQEFGDHPNIISLLDVIRAENDRDIYLVFEFMDTDLNAVIRKGGLLQDVHVRSIFYQLLRATRFLHSGHVVHRDQKPSNVLLDANCTVKLCDFGLARSLGDLPEGPEDQAVTEYVATRWYRAPEVLLSSHRYTLGVDMWSLGCILGEMLRGRPLFPGTSTLHQLELILETIPPPSEEDLLALGSGCRASVLHQLGSRPRQTLDALLPPDTSPEALDLLRRLLVFAPDKRLSATQALQHPYVQRFHCPSDEWAREADVRPRAHEGVQLSVPEYRSRVYQMILE 345
The following BLAST results are available for this feature:
BLAST of TCONS_00001213 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MK152.708e-13858.26Mitogen-activated protein kinase 15 OS=Homo sapien... [more]
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