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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001212 ID=TCONS_00001212|Name=TCONS_00001212|organism=Clytia hemisphaerica|type=transcript|length=913bp CCGAGTCATAAAGCTGTTCGAACCACCAAATCTGCACCAACAAAGAATGC ACGTACACCGGCCGATCAACAGgTGGCGCACCAGAGACCAGGACAATATT CTTCTCCGAAGGTTCAACGAGTGGCCGGCAAAAAGCCCTCTTCAACGCAG GCAACGTCAGGTCTAACCATGTCAAGTTACACGCAAAGTCACGCCTCTGT CAGTAAAAGTACACTGGATGCAATCCATGGACTGTCAATCAAATAGGGCT GTTGAAATAATGACAAACAATCTATTATAATGCACTTATTGAAATGAAAC GGAAAAAAGTTTCCCCGAAAAGTCAATGAGTACGAGAATATTTAGTCCGC ACTTTATTGTCAGAACCNCTTCTTCCGAAAAGTCAATGAGTACGAGAATA TTAAGTCCACCCTTTATTGTCAGAACCTTAAAATTGACGATTCTTCGTAA GATTCTTAGTTTTctttgaaacatttttgtaaaGTCTTTATCTGCGACAT TTTACTTCGAATTTAGTCTTTTTCAACCAGAGTTAGGGTCTTGACTTAAA ATGATTTTAACAGAAAATAAAGgggagaaaattgaaaatatttaagttaA ATTATACTCagtagagaaatctattttgatgtttttgtgtAAATGCGCGT ATTGTATcataaattttttgtcaattttttagaTGTAATATTACATTAGt agagaaatttttatttcatggcttttaattcaattttttaagaaagtcTT CGAAGACAAACATTTCAGTCGAATTTCCACACGTACAACGTTTCAAGGTC TCATTGATGGAGGTCCCTGAAACTCAATTTTTAGATGTTGTTAGAAATCA AAATGTATAGAAAGTTTTTGTACATGCATTTTAATTTTATGCTCAAGAAA TACAAActtcaaa Run BLAST on NCBI transcript from alignment at sc0000007:1086988..1088478- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001212 ID=TCONS_00001212|Name=TCONS_00001212|organism=Clytia hemisphaerica|type=transcript|length=1491bp|location=Sequence derived from alignment at sc0000007:1086988..1088478- (Clytia hemisphaerica) CCGAGTCATAAAGCTGTTCGAACCACCAAATCTGCACCAACAAAGAATGC
ACGTACACCGGCCGATCAACAGGTATTTATGGTCTTCCTCTAAAACCTTG
AATTCAATGCACTTTCAACATTTAATGATCCATCACCATCAGACATCCAT
ACATGATTACTGTTCACAACCTCATACATTCCACCTTTTCCGTCCACACA
CATTTCTAATAAAATTGACCCTTCTCTCTTTTCCTTTTGTAGACTTACAA
ATCCAGCCCTTCCAACATGCGTTCTCGTCCTATCTCATCACAGTATGATA
GAAAAGCTAATAATAATATCCTGACGCGCCCAGATAACAATTTACAGATT
ACCAGTACCTCCAAAGTAAGACATTTTTTGTAATTCCTTCCCTTTCACAA
CCCTTGTTCCAATTCACCCATCCTCCCCATGTCATCGACAATGTTTTATG
ACGGCTGACACTTATGTGTAAAGGAAAGACCAGAACAATTTGCCATCCTT
TTGTTTAATGGATTCATCAAACTCCTCAAAGCCTCTTTTCATAATTCTTG
CAAGTCAGTTTTCCATGGTATAAGGCTCTAACAGTCAGTATGGATTTACT
CATTCGAGTGTGAAACTTTTCGATCTGAATAACTTTTTTGTTTTCATTAG
GTGGCGCACCAGAGACCAGGACAATATTCTTCTCCGAAGGTTCAACGAGT
GGCCGGCAAAAAGCCCTCTTCAACGCAGGCAACGTCAGGTCTAACCATGT
CAAGTTACACGCAAAGTCACGCCTCTGTCAGTAAAAGTACACTGGATGCA
ATCCATGGACTGTCAATCAAATAGGGCTGTTGAAATAATGACAAACAATC
TATTATAATGCACTTATTGAAATGAAACGGAAAAAAGTTTCCCCGAAAAG
TCAATGAGTACGAGAATATTTAGTCCGCACTTTATTGTCAGAACCNCTTC
TTCCGAAAAGTCAATGAGTACGAGAATATTAAGTCCACCCTTTATTGTCA
GAACCTTAAAATTGACGATTCTTCGTAAGATTCTTAGTTTTCTTTGAAAC
ATTTTTGTAAAGTCTTTATCTGCGACATTTTACTTCGAATTTAGTCTTTT
TCAACCAGAGTTAGGGTCTTGACTTAAAATGATTTTAACAGAAAATAAAG
GGGAGAAAATTGAAAATATTTAAGTTAAATTATACTCAGTAGAGAAATCT
ATTTTGATGTTTTTGTGTAAATGCGCGTATTGTATCATAAATTTTTTGTC
AATTTTTTAGATGTAATATTACATTAGTAGAGAAATTTTTATTTCATGGC
TTTTAATTCAATTTTTTAAGAAAGTCTTCGAAGACAAACATTTCAGTCGA
ATTTCCACACGTACAACGTTTCAAGGTCTCATTGATGGAGGTCCCTGAAA
CTCAATTTTTAGATGTTGTTAGAAATCAAAATGTATAGAAAGTTTTTGTA
CATGCATTTTAATTTTATGCTCAAGAAATACAAACTTCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00001212-exon-sc0000007-1575043694:1088407..1088478 | TCONS_00001212-exon-sc0000007-1575043694:1088407..1088478 | Clytia hemisphaerica | exon |
TCONS_00001212-exon-sc0000007-1575043694:1086988..1087828 | TCONS_00001212-exon-sc0000007-1575043694:1086988..1087828 | Clytia hemisphaerica | exon |
TCONS_00001212-exon-sc0000007-1510915933:1088407..1088478 | TCONS_00001212-exon-sc0000007-1510915933:1088407..1088478 | Clytia hemisphaerica | exon |
TCONS_00001212-exon-sc0000007-1510915933:1086988..1087828 | TCONS_00001212-exon-sc0000007-1510915933:1086988..1087828 | Clytia hemisphaerica | exon |
TCONS_00001212-exon-sc0000007-1491911889:1088407..1088478 | TCONS_00001212-exon-sc0000007-1491911889:1088407..1088478 | Clytia hemisphaerica | exon |
TCONS_00001212-exon-sc0000007-1491911889:1086988..1087828 | TCONS_00001212-exon-sc0000007-1491911889:1086988..1087828 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000007 | supercontig | sc0000007:1086988..1088478 - |
Blast
The following BLAST results are available for this feature:
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