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TCONS_00001199 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001199
Unique NameTCONS_00001199
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4023

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001199 ID=TCONS_00001199|Name=TCONS_00001199|organism=Clytia hemisphaerica|type=transcript|length=4023bp
atcgaattagaggTTGGGAGCGAATACAGGGCTTCGCCATCATTCCTTGA
AACATTTCACCATGCGTTGGTTTTCCAACAGAAACAAAATCCACCCAACG
GAAGGTGATggtgaaaatgaagaatttttcgaaaatgaaagCAAAAATAA
TGAAACCTTCAAAATTACCCAAGATTTCAAGTTATTTTCGTCGATGGTTC
ATTTGGCGATCGGTTTTGCAGATGTTTGTTTCTGGTGGTCTGTGTGGCTG
ATGTCCGATTCATTGTACCCTATCAATGGTATGGTTAACGATGGTTACGC
CTTCTTACGAGGATATTGTCTCATCTTAACGGCCAATTTTGTCTACTTTA
CGATCCGTTGGCTGTTTTACGGAACATTTACCGAGAATTACGATCATTTT
TCCAGTATAAGTTACCCggcaatatttttgaaatatgcaaAATTCATCAA
GGAGAAAAGtttcaaattcaaagttttgaaattgacACTTCCGCTTTGTG
TTTATGGCTTAGTGGTGGGTTTCATTCAAATCTGGCGTGGATTGTTCGAC
ATCTTCGGCTACTTATTGAAACTGTTGGAAAGGAATTATCAAATCAATCA
AGTATGGAGTGCATTGGCTTTGCAATTTGTTGTGGCCGTATCGCTTGCTT
TCACTCGCAAAAACAATGCAGTGAATTTGTGCCCAACTCACGAAGAGTAC
AAAAAAGACGAGTTACAATACTTGGACACACTTTTCAATATGCAAAACTT
AACATTCATGAAATTGAGTCATAGAAAGAAGGAACAGAAATGGTTCGCGT
TGGCAGAACGAAAGTTCAACCTCCCTGCTCttttcaaaagagaaaaaagt
ttAGTCAGTGAATCGATCGTCGACACAGATTTTGATATCGTGAAATATTT
TACCAATAAATTGATCAGCAGCCTTTCCACCACTCAGCGCGAACCAATCA
ATGGCTTGTGGCAAATCATCGTGGAGACAGAGCCTAAAGAGAGAGAATGT
GTGGAAGAATGTCATTCTTTGGAGAAAGTGAACCTTGCtttcactgaaaa
tgaaaacgttttTCAATCTACTACGACTACCTTAACCTCACTTCCCACTC
CTTTAAGCACTCCGCCAGCTACACCCACGCCACCCCCACGCCCTATTCCC
GCCATCCAAATAAATGGGGAAGTAGGGATTGAAAGAGAAAAAACGGTGGT
ATGGGAGAATCGAAAAAGCAAAGTTACTGTCAGTTTTGAATCCGAGGAAA
CTTCGACAATAGGCACGGACAGTGAGGAGGATATCAAGTCAATAGCGGTA
GAACAAAACGAACAACAATATTTGAATCTTGATCAATTAAATGAAGAACA
GAAAGAGTACACAAAAATCTTGACCAACATTTCGGAGAAACGGTTTGAAA
AGAGAGCAAAATCAATCTGCATCAATATAACCCCTGACATCAAACTTCCC
AAACAATGCGAAGAAAAGGAGACAAAGGAGGAAATGGTGGATTCGTTTGA
TTGGAGACATTCAGTGATCGAAGTGTTCGGATATCTGTATGCTATCCATC
ATCGACAAATCTTCCTTCATATTTTCGGTGGAATGTTCTGGAGCACaaca
tggaaattgtttgatttCGCAACAGAATCCATTTTCactaaaaccgcaag
tgataTTCCAGGACTTGTTTTGATTGccattttttgtcattctatgaACC
ATTTGGTTTTGTTTCGATTCAAAGAGATGGCGCCAAGTATCTACTTGAAG
acattcttcaattttttgtgTGGTGTATTTACTGTGTGTTTGTGGGCATG
CGCGTGGTACGTCTTGGATATCACCACCACTTTTACAGaTCAGAAACGAT
TGTTGTGGGTGACTGCCAACTTGGTTGCTTTCTTCGTGCTAGCTTTTTTC
AATATATCTATAAACATTGCTTTGTGAAATCGGCTGCCGTGAAAATGGAC
AAATCTAAATGTAATTTTTACCTATTGTTAAATACATCGAGACTTGAAAA
CCATTTTGAACCAAGTCCATTGTTATCGTTTAATTCCCAAGGCAACCACA
TCTGATGATCCTATCATCATATTCCCTGCAAGCGGATGGCGTCTGGAACA
ATGTGGAAATACTTTGACGTAGCCACCATATCTTTTACATTGAAACGAAT
TCACAATAGCTAAATCAGAAGTTTCGAAATGGGCGATGAGATCTATATCA
CAGGGAATTCTTGATTAGGTTGTTTTAGATATCTTTATCGTTGTTTGTAA
ATATGAGAAGAAATGAATGAATTTTCATACCTACCCATCAAAGTATTTTC
ATTCCAAAAAGAGAGAGTAGGTATATTAATAGAACTAATTCAATACTACA
CTTGAACCAGATTTCCATATGAGATAGGGAAATTCATCTCTCAATGTTTT
GCTTCACAATTTTAATTTGATAAGATAAATAACTCAAAGGCCAGCGTGTT
ACAAAACACCTTTTCTCTTTCAATAATACTTGAAAATTATCGCCCTCcct
tcaaaaaatattgataaagtaACAGAGGGAAAGAGTGCCCGTTCTTCATT
TTTCCTTACTATTCATAAACCGGATAGATTTTCAGAGATATCTAGAAAAC
TGTGGAACAAAAAGAGAGTGGCCACCGAGAAAGTTTATCATTCGCAAATG
AGCTCACATACAGTCAAGTGATAAAGGGTTATTTTCTATCGACAACAATG
AGTCGTTTAGAATTCGTACAGCTCCAAGAAATCACCAATCCTTTTGGTGA
AACTAACTTGGAAATCATGTGCAATAAATACTTCGGAACGACTGTGAATT
GTACTTGTGATAAATTCAATCTGTTTGTAGAGGGACAGGTGGTCAACTTT
TGTCCATACGTTGGAACCACTGCAGCAAAATATACAGCCCGTCAACATTC
AACAGGAGATATTGTTTACGCGTCGACCATCATCTTCTTCTCCATCATCG
GAATCATTGGCAATTTATTGGTGATTTTCTGCCACCCCAATAACAAAGGA
AAGAACCTCACTGGTAACATACTAAGGAGAGTATCAGCTCATCAAAGACT
GGTGAATACATTGGCAGCATTTGACCTCTTCTTTTCGATAGTAAATATTG
CACTTGTCTTCACGCAGCTTTGGACAACAAAATGGATCTTAGGTACGCAT
GCGTGTAAAGCATTTACCAGTATGGCCACTCTTGGAGCTTTGATTGCGAT
AGGTATCATATTCATCATTGCAGTGGAAAGATATTTCGGTATAGTTCATC
CATTTGCTATTGGGATTTCAACCAATGCTCGTTTGTATGGTTTGCTTACA
CTCAATATAACACTGGCACTTATCCCTATCATCCCTCGTATCATTTACCT
GGGAATTCACCAAGAGACATCCCAATGCGGAGAAAGTTGGCCTGAGAAAT
ATGGCCCTGTGACGTATAGTTGGGTCATTTTAGTGCTGTATTTTACAATC
CCTGTATCAATGATATGTGCACTGTATTGGAAAATCTACACAACTTTGAA
CCAACGACAAACAATCTGTGAAGTAGTTTCTGGCAGTTTGAACCTCAAGG
TGCAAAGCAAACAACTACAAGACAATCGGCGAACCATGAAAAACTTGGTT
GCTGTTCTTGTAGCTTTTGTTATATTTACTTTCCCAAACAAACTTAAATG
GGTCATTTTTGATATGGTTGGTGGATATAAAAATTTGGATGCAGATATTT
ACACGAATGTTAACTACATTGGTAGCGTTTTATACAGCCTTCACGTCATT
ATAAACCCTTTAGCTTACACCATCATCGATAAAAGGTTCCGCCAGAAAGT
CAGCAATTTCATCCGACGGAAATTTCGCAAGATTCATTTCAAGTTGGTCA
TTCACCAAGCTTCATCGAAAGACGATTATGTTGTGGACGATGGACTTCAG
TTGAAAGCTTACACCAACACCTTGATTGATAGCGATAAATCGAACTCGTC
GTCACGACAACCGAGCCCTGAAGTTGTCACGAAAATTGAACCTATGCATG
CTAACATTCTACCCGatattttg
Run BLAST on NCBI

protein sequence of TCONS_00001199-protein

>TCONS_00001199-protein ID=TCONS_00001199-protein|Name=TCONS_00001199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=621bp
MRWFSNRNKIHPTEGDGENEEFFENESKNNETFKITQDFKLFSSMVHLAI
GFADVCFWWSVWLMSDSLYPINGMVNDGYAFLRGYCLILTANFVYFTIRW
LFYGTFTENYDHFSSISYPAIFLKYAKFIKEKSFKFKVLKLTLPLCVYGL
VVGFIQIWRGLFDIFGYLLKLLERNYQINQVWSALALQFVVAVSLAFTRK
NNAVNLCPTHEEYKKDELQYLDTLFNMQNLTFMKLSHRKKEQKWFALAER
KFNLPALFKREKSLVSESIVDTDFDIVKYFTNKLISSLSTTQREPINGLW
QIIVETEPKERECVEECHSLEKVNLAFTENENVFQSTTTTLTSLPTPLST
PPATPTPPPRPIPAIQINGEVGIEREKTVVWENRKSKVTVSFESEETSTI
GTDSEEDIKSIAVEQNEQQYLNLDQLNEEQKEYTKILTNISEKRFEKRAK
SICINITPDIKLPKQCEEKETKEEMVDSFDWRHSVIEVFGYLYAIHHRQI
FLHIFGGMFWSTTWKLFDFATESIFTKTASDIPGLVLIAIFCHSMNHLVL
FRFKEMAPSIYLKTFFNFLCGVFTVCLWACAWYVLDITTTFTDQKRLLWV
TANLVAFFVLAFFNISINIAL
Run BLAST on NCBI

transcript from alignment at sc0000007:956451..960770-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001199 ID=TCONS_00001199|Name=TCONS_00001199|organism=Clytia hemisphaerica|type=transcript|length=4320bp|location=Sequence derived from alignment at sc0000007:956451..960770- (Clytia hemisphaerica)
ATCGAATTAGAGGTTGGGAGCGAATACAGGGCTTCGCCATCATTCCTTGA AACATTTCACCATGCGTTGGTTTTCCAACAGAAACAAAATCCACCCAACG GAAGGTGATGGTGAAAATGAAGAATTTTTCGAAAATGAAAGCAAAAATAA TGAAACCTTCAAAATTACCCAAGGTAGGTTGAATCTTGGCGGGACGAGAA ATAAAAATCATGCCCATCTTTTAGCAGTGTATGATCTTAAAGTTGTTTTC GCCAAGCATACAATGTATGTCATTACCATACATTTAAAATTTCGTTTTCC TTTAGATTTCAAGTTATTTTCGTCGATGGTTCATTTGGCGATCGGTTTTG CAGATGTTTGTTTCTGGTGGTCTGTGTGGCTGATGTCCGATTCATTGTAC CCTATCAATGGTATGGTTAACGATGGTTACGCCTTCTTACGAGGATATTG TCTCATCTTAACGGCCAATTTTGTCTACTTTACGATCCGTTGGCTGTTTT ACGGAACATTTACCGAGAATTACGATCATTTTTCCAGTATAAGTTACCCG GCAATATTTTTGAAATATGCAAAATTCATCAAGGAGAAAAGTTTCAAATT CAAAGTTTTGAAATTGACACTTCCGCTTTGTGTTTATGGCTTAGTGGTGG GTTTCATTCAAATCTGGCGTGGATTGTTCGACATCTTCGGCTACTTATTG AAACTGTTGGAAAGGAATTATCAAATCAATCAAGTATGGAGTGCATTGGC TTTGCAATTTGTTGTGGCCGTATCGCTTGCTTTCACTCGCAAAAACAATG CAGTGAATTTGTGCCCAACTCACGAAGAGTACAAAAAAGACGAGTTACAA TACTTGGACACACTTTTCAATATGCAAAACTTAACATTCATGAAATTGAG TCATAGAAAGAAGGAACAGAAATGGTTCGCGTTGGCAGAACGAAAGTTCA ACCTCCCTGCTCTTTTCAAAAGAGAAAAAAGTTTAGTCAGTGAATCGATC GTCGACACAGATTTTGATATCGTGAAATATTTTACCAATAAATTGATCAG CAGCCTTTCCACCACTCAGCGCGAACCAATCAATGGCTTGTGGCAAATCA TCGTGGAGACAGAGCCTAAAGAGAGAGAATGTGTGGAAGAATGTCATTCT TTGGAGAAAGTGAACCTTGCTTTCACTGAAAATGAAAACGTTTTTCAATC TACTACGACTACCTTAACCTCACTTCCCACTCCTTTAAGCACTCCGCCAG CTACACCCACGCCACCCCCACGCCCTATTCCCGCCATCCAAATAAATGGG GAAGTAGGGATTGAAAGAGAAAAAACGGTGGTATGGGAGAATCGAAAAAG CAAAGTTACTGTCAGTTTTGAATCCGAGGAAACTTCGACAATAGGCACGG ACAGTGAGGAGGATATCAAGTCAATAGCGGTAGAACAAAACGAACAACAA TATTTGAATCTTGATCAATTAAATGAAGAACAGAAAGAGTACACAAAAAT CTTGACCAACATTTCGGAGAAACGGTTTGAAAAGAGAGCAAAATCAATCT GCATCAATATAACCCCTGACATCAAACTTCCCAAACAATGCGAAGAAAAG GAGACAAAGGAGGAAATGGTGGATTCGTTTGATTGGAGACATTCAGTGAT CGAAGTGTTCGGATATCTGTATGCTATCCATCATCGACAAATCTTCCTTC ATATTTTCGGTGGAATGTTCTGGAGCACAACATGGAAATTGTTTGATTTC GCAACAGAATCCATTTTCACTAAAACCGCAAGTGATATTCCAGGACTTGT TTTGATTGCCATTTTTTGTCATTCTATGAACCATTTGGTTTTGTTTCGAT TCAAAGAGATGGCGCCAAGTATCTACTTGAAGACATTCTTCAATTTTTTG TGTGGTGTATTTACTGTGTGTTTGTGGGCATGCGCGTGGTACGTCTTGGA TATCACCACCACTTTTACAGGTACGTAGAGACTGTGAAGCCAGCAGAGTG ATGATATTATATCTAGAACACCATTCATTACATATACGACAATCTTTCTA ATTAAGTTTGATTTCCAAAGGGCCAGGTTTAAAGTGACATTAATTTAGGG TTAAAAATTAAAATCAAATTTTTTCATCATTTTAGATCAGAAACGATTGT TGTGGGTGACTGCCAACTTGGTTGCTTTCTTCGTGCTAGCTTTTTTCAAT ATATCTATAAACATTGCTTTGTGAAATCGGCTGCCGTGAAAATGGACAAA TCTAAATGTAATTTTTACCTATTGTTAAATACATCGAGACTTGAAAACCA TTTTGAACCAAGTCCATTGTTATCGTTTAATTCCCAAGGCAACCACATCT GATGATCCTATCATCATATTCCCTGCAAGCGGATGGCGTCTGGAACAATG TGGAAATACTTTGACGTAGCCACCATATCTTTTACATTGAAACGAATTCA CAATAGCTAAATCAGAAGTTTCGAAATGGGCGATGAGATCTATATCACAG GGAATTCTTGATTAGGTTGTTTTAGATATCTTTATCGTTGTTTGTAAATA TGAGAAGAAATGAATGAATTTTCATACCTACCCATCAAAGTATTTTCATT CCAAAAAGAGAGAGTAGGTATATTAATAGAACTAATTCAATACTACACTT GAACCAGATTTCCATATGAGATAGGGAAATTCATCTCTCAATGTTTTGCT TCACAATTTTAATTTGATAAGATAAATAACTCAAAGGCCAGCGTGTTACA AAACACCTTTTCTCTTTCAATAATACTTGAAAATTATCGCCCTCCCTTCA AAAAATATTGATAAAGTAACAGAGGGAAAGAGTGCCCGTTCTTCATTTTT CCTTACTATTCATAAACCGGATAGATTTTCAGAGATATCTAGAAAACTGT GGAACAAAAAGAGAGTGGCCACCGAGAAAGTTTATCATTCGCAAATGAGC TCACATACAGTCAAGTGATAAAGGGTTATTTTCTATCGACAACAATGAGT CGTTTAGAATTCGTACAGCTCCAAGAAATCACCAATCCTTTTGGTGAAAC TAACTTGGAAATCATGTGCAATAAATACTTCGGAACGACTGTGAATTGTA CTTGTGATAAATTCAATCTGTTTGTAGAGGGACAGGTGGTCAACTTTTGT CCATACGTTGGAACCACTGCAGCAAAATATACAGCCCGTCAACATTCAAC AGGAGATATTGTTTACGCGTCGACCATCATCTTCTTCTCCATCATCGGAA TCATTGGCAATTTATTGGTGATTTTCTGCCACCCCAATAACAAAGGAAAG AACCTCACTGGTAACATACTAAGGAGAGTATCAGCTCATCAAAGACTGGT GAATACATTGGCAGCATTTGACCTCTTCTTTTCGATAGTAAATATTGCAC TTGTCTTCACGCAGCTTTGGACAACAAAATGGATCTTAGGTACGCATGCG TGTAAAGCATTTACCAGTATGGCCACTCTTGGAGCTTTGATTGCGATAGG TATCATATTCATCATTGCAGTGGAAAGATATTTCGGTATAGTTCATCCAT TTGCTATTGGGATTTCAACCAATGCTCGTTTGTATGGTTTGCTTACACTC AATATAACACTGGCACTTATCCCTATCATCCCTCGTATCATTTACCTGGG AATTCACCAAGAGACATCCCAATGCGGAGAAAGTTGGCCTGAGAAATATG GCCCTGTGACGTATAGTTGGGTCATTTTAGTGCTGTATTTTACAATCCCT GTATCAATGATATGTGCACTGTATTGGAAAATCTACACAACTTTGAACCA ACGACAAACAATCTGTGAAGTAGTTTCTGGCAGTTTGAACCTCAAGGTGC AAAGCAAACAACTACAAGACAATCGGCGAACCATGAAAAACTTGGTTGCT GTTCTTGTAGCTTTTGTTATATTTACTTTCCCAAACAAACTTAAATGGGT CATTTTTGATATGGTTGGTGGATATAAAAATTTGGATGCAGATATTTACA CGAATGTTAACTACATTGGTAGCGTTTTATACAGCCTTCACGTCATTATA AACCCTTTAGCTTACACCATCATCGATAAAAGGTTCCGCCAGAAAGTCAG CAATTTCATCCGACGGAAATTTCGCAAGATTCATTTCAAGTTGGTCATTC ACCAAGCTTCATCGAAAGACGATTATGTTGTGGACGATGGACTTCAGTTG AAAGCTTACACCAACACCTTGATTGATAGCGATAAATCGAACTCGTCGTC ACGACAACCGAGCCCTGAAGTTGTCACGAAAATTGAACCTATGCATGCTA ACATTCTACCCGATATTTTG

Coding sequence (CDS) from alignment at sc0000007:956451..960770-

>TCONS_00001199 ID=TCONS_00001199|Name=TCONS_00001199|organism=Clytia hemisphaerica|type=CDS|length=5598bp|location=Sequence derived from alignment at sc0000007:956451..960770- (Clytia hemisphaerica)
ATCAGAAACGATTGTTGTGGGTGACTGCCAACTTGGTTGCTTTCTTCGTG
CTAGCTTTTTTCAATATATCTATAAACATTGCTTTGTGAATTTCAAGTTA
TTTTCGTCGATGGTTCATTTGGCGATCGGTTTTGCAGATGTTTGTTTCTG
GTGGTCTGTGTGGCTGATGTCCGATTCATTGTACCCTATCAATGGTATGG
TTAACGATGGTTACGCCTTCTTACGAGGATATTGTCTCATCTTAACGGCC
AATTTTGTCTACTTTACGATCCGTTGGCTGTTTTACGGAACATTTACCGA
GAATTACGATCATTTTTCCAGTATAAGTTACCCGGCAATATTTTTGAAAT
ATGCAAAATTCATCAAGGAGAAAAGTTTCAAATTCAAAGTTTTGAAATTG
ACACTTCCGCTTTGTGTTTATGGCTTAGTGGTGGGTTTCATTCAAATCTG
GCGTGGATTGTTCGACATCTTCGGCTACTTATTGAAACTGTTGGAAAGGA
ATTATCAAATCAATCAAGTATGGAGTGCATTGGCTTTGCAATTTGTTGTG
GCCGTATCGCTTGCTTTCACTCGCAAAAACAATGCAGTGAATTTGTGCCC
AACTCACGAAGAGTACAAAAAAGACGAGTTACAATACTTGGACACACTTT
TCAATATGCAAAACTTAACATTCATGAAATTGAGTCATAGAAAGAAGGAA
CAGAAATGGTTCGCGTTGGCAGAACGAAAGTTCAACCTCCCTGCTCTTTT
CAAAAGAGAAAAAAGTTTAGTCAGTGAATCGATCGTCGACACAGATTTTG
ATATCGTGAAATATTTTACCAATAAATTGATCAGCAGCCTTTCCACCACT
CAGCGCGAACCAATCAATGGCTTGTGGCAAATCATCGTGGAGACAGAGCC
TAAAGAGAGAGAATGTGTGGAAGAATGTCATTCTTTGGAGAAAGTGAACC
TTGCTTTCACTGAAAATGAAAACGTTTTTCAATCTACTACGACTACCTTA
ACCTCACTTCCCACTCCTTTAAGCACTCCGCCAGCTACACCCACGCCACC
CCCACGCCCTATTCCCGCCATCCAAATAAATGGGGAAGTAGGGATTGAAA
GAGAAAAAACGGTGGTATGGGAGAATCGAAAAAGCAAAGTTACTGTCAGT
TTTGAATCCGAGGAAACTTCGACAATAGGCACGGACAGTGAGGAGGATAT
CAAGTCAATAGCGGTAGAACAAAACGAACAACAATATTTGAATCTTGATC
AATTAAATGAAGAACAGAAAGAGTACACAAAAATCTTGACCAACATTTCG
GAGAAACGGTTTGAAAAGAGAGCAAAATCAATCTGCATCAATATAACCCC
TGACATCAAACTTCCCAAACAATGCGAAGAAAAGGAGACAAAGGAGGAAA
TGGTGGATTCGTTTGATTGGAGACATTCAGTGATCGAAGTGTTCGGATAT
CTGTATGCTATCCATCATCGACAAATCTTCCTTCATATTTTCGGTGGAAT
GTTCTGGAGCACAACATGGAAATTGTTTGATTTCGCAACAGAATCCATTT
TCACTAAAACCGCAAGTGATATTCCAGGACTTGTTTTGATTGCCATTTTT
TGTCATTCTATGAACCATTTGGTTTTGTTTCGATTCAAAGAGATGGCGCC
AAGTATCTACTTGAAGACATTCTTCAATTTTTTGTGTGGTGTATTTACTG
TGTGTTTGTGGGCATGCGCGTGGTACGTCTTGGATATCACCACCACTTTT
ACAGATGCGTTGGTTTTCCAACAGAAACAAAATCCACCCAACGGAAGGTG
ATGGTGAAAATGAAGAATTTTTCGAAAATGAAAGCAAAAATAATGAAACC
TTCAAAATTACCCAAGATCAGAAACGATTGTTGTGGGTGACTGCCAACTT
GGTTGCTTTCTTCGTGCTAGCTTTTTTCAATATATCTATAAACATTGCTT
TGTGAATTTCAAGTTATTTTCGTCGATGGTTCATTTGGCGATCGGTTTTG
CAGATGTTTGTTTCTGGTGGTCTGTGTGGCTGATGTCCGATTCATTGTAC
CCTATCAATGGTATGGTTAACGATGGTTACGCCTTCTTACGAGGATATTG
TCTCATCTTAACGGCCAATTTTGTCTACTTTACGATCCGTTGGCTGTTTT
ACGGAACATTTACCGAGAATTACGATCATTTTTCCAGTATAAGTTACCCG
GCAATATTTTTGAAATATGCAAAATTCATCAAGGAGAAAAGTTTCAAATT
CAAAGTTTTGAAATTGACACTTCCGCTTTGTGTTTATGGCTTAGTGGTGG
GTTTCATTCAAATCTGGCGTGGATTGTTCGACATCTTCGGCTACTTATTG
AAACTGTTGGAAAGGAATTATCAAATCAATCAAGTATGGAGTGCATTGGC
TTTGCAATTTGTTGTGGCCGTATCGCTTGCTTTCACTCGCAAAAACAATG
CAGTGAATTTGTGCCCAACTCACGAAGAGTACAAAAAAGACGAGTTACAA
TACTTGGACACACTTTTCAATATGCAAAACTTAACATTCATGAAATTGAG
TCATAGAAAGAAGGAACAGAAATGGTTCGCGTTGGCAGAACGAAAGTTCA
ACCTCCCTGCTCTTTTCAAAAGAGAAAAAAGTTTAGTCAGTGAATCGATC
GTCGACACAGATTTTGATATCGTGAAATATTTTACCAATAAATTGATCAG
CAGCCTTTCCACCACTCAGCGCGAACCAATCAATGGCTTGTGGCAAATCA
TCGTGGAGACAGAGCCTAAAGAGAGAGAATGTGTGGAAGAATGTCATTCT
TTGGAGAAAGTGAACCTTGCTTTCACTGAAAATGAAAACGTTTTTCAATC
TACTACGACTACCTTAACCTCACTTCCCACTCCTTTAAGCACTCCGCCAG
CTACACCCACGCCACCCCCACGCCCTATTCCCGCCATCCAAATAAATGGG
GAAGTAGGGATTGAAAGAGAAAAAACGGTGGTATGGGAGAATCGAAAAAG
CAAAGTTACTGTCAGTTTTGAATCCGAGGAAACTTCGACAATAGGCACGG
ACAGTGAGGAGGATATCAAGTCAATAGCGGTAGAACAAAACGAACAACAA
TATTTGAATCTTGATCAATTAAATGAAGAACAGAAAGAGTACACAAAAAT
CTTGACCAACATTTCGGAGAAACGGTTTGAAAAGAGAGCAAAATCAATCT
GCATCAATATAACCCCTGACATCAAACTTCCCAAACAATGCGAAGAAAAG
GAGACAAAGGAGGAAATGGTGGATTCGTTTGATTGGAGACATTCAGTGAT
CGAAGTGTTCGGATATCTGTATGCTATCCATCATCGACAAATCTTCCTTC
ATATTTTCGGTGGAATGTTCTGGAGCACAACATGGAAATTGTTTGATTTC
GCAACAGAATCCATTTTCACTAAAACCGCAAGTGATATTCCAGGACTTGT
TTTGATTGCCATTTTTTGTCATTCTATGAACCATTTGGTTTTGTTTCGAT
TCAAAGAGATGGCGCCAAGTATCTACTTGAAGACATTCTTCAATTTTTTG
TGTGGTGTATTTACTGTGTGTTTGTGGGCATGCGCGTGGTACGTCTTGGA
TATCACCACCACTTTTACAGATGCGTTGGTTTTCCAACAGAAACAAAATC
CACCCAACGGAAGGTGATGGTGAAAATGAAGAATTTTTCGAAAATGAAAG
CAAAAATAATGAAACCTTCAAAATTACCCAAGATCAGAAACGATTGTTGT
GGGTGACTGCCAACTTGGTTGCTTTCTTCGTGCTAGCTTTTTTCAATATA
TCTATAAACATTGCTTTGTGAATTTCAAGTTATTTTCGTCGATGGTTCAT
TTGGCGATCGGTTTTGCAGATGTTTGTTTCTGGTGGTCTGTGTGGCTGAT
GTCCGATTCATTGTACCCTATCAATGGTATGGTTAACGATGGTTACGCCT
TCTTACGAGGATATTGTCTCATCTTAACGGCCAATTTTGTCTACTTTACG
ATCCGTTGGCTGTTTTACGGAACATTTACCGAGAATTACGATCATTTTTC
CAGTATAAGTTACCCGGCAATATTTTTGAAATATGCAAAATTCATCAAGG
AGAAAAGTTTCAAATTCAAAGTTTTGAAATTGACACTTCCGCTTTGTGTT
TATGGCTTAGTGGTGGGTTTCATTCAAATCTGGCGTGGATTGTTCGACAT
CTTCGGCTACTTATTGAAACTGTTGGAAAGGAATTATCAAATCAATCAAG
TATGGAGTGCATTGGCTTTGCAATTTGTTGTGGCCGTATCGCTTGCTTTC
ACTCGCAAAAACAATGCAGTGAATTTGTGCCCAACTCACGAAGAGTACAA
AAAAGACGAGTTACAATACTTGGACACACTTTTCAATATGCAAAACTTAA
CATTCATGAAATTGAGTCATAGAAAGAAGGAACAGAAATGGTTCGCGTTG
GCAGAACGAAAGTTCAACCTCCCTGCTCTTTTCAAAAGAGAAAAAAGTTT
AGTCAGTGAATCGATCGTCGACACAGATTTTGATATCGTGAAATATTTTA
CCAATAAATTGATCAGCAGCCTTTCCACCACTCAGCGCGAACCAATCAAT
GGCTTGTGGCAAATCATCGTGGAGACAGAGCCTAAAGAGAGAGAATGTGT
GGAAGAATGTCATTCTTTGGAGAAAGTGAACCTTGCTTTCACTGAAAATG
AAAACGTTTTTCAATCTACTACGACTACCTTAACCTCACTTCCCACTCCT
TTAAGCACTCCGCCAGCTACACCCACGCCACCCCCACGCCCTATTCCCGC
CATCCAAATAAATGGGGAAGTAGGGATTGAAAGAGAAAAAACGGTGGTAT
GGGAGAATCGAAAAAGCAAAGTTACTGTCAGTTTTGAATCCGAGGAAACT
TCGACAATAGGCACGGACAGTGAGGAGGATATCAAGTCAATAGCGGTAGA
ACAAAACGAACAACAATATTTGAATCTTGATCAATTAAATGAAGAACAGA
AAGAGTACACAAAAATCTTGACCAACATTTCGGAGAAACGGTTTGAAAAG
AGAGCAAAATCAATCTGCATCAATATAACCCCTGACATCAAACTTCCCAA
ACAATGCGAAGAAAAGGAGACAAAGGAGGAAATGGTGGATTCGTTTGATT
GGAGACATTCAGTGATCGAAGTGTTCGGATATCTGTATGCTATCCATCAT
CGACAAATCTTCCTTCATATTTTCGGTGGAATGTTCTGGAGCACAACATG
GAAATTGTTTGATTTCGCAACAGAATCCATTTTCACTAAAACCGCAAGTG
ATATTCCAGGACTTGTTTTGATTGCCATTTTTTGTCATTCTATGAACCAT
TTGGTTTTGTTTCGATTCAAAGAGATGGCGCCAAGTATCTACTTGAAGAC
ATTCTTCAATTTTTTGTGTGGTGTATTTACTGTGTGTTTGTGGGCATGCG
CGTGGTACGTCTTGGATATCACCACCACTTTTACAGATGCGTTGGTTTTC
CAACAGAAACAAAATCCACCCAACGGAAGGTGATGGTGAAAATGAAGAAT
TTTTCGAAAATGAAAGCAAAAATAATGAAACCTTCAAAATTACCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000651XLOC_000651Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001199-proteinTCONS_00001199-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001199-exon-sc0000007-1575043694:960598..960770TCONS_00001199-exon-sc0000007-1575043694:960598..960770Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1575043694:958801..960465TCONS_00001199-exon-sc0000007-1575043694:958801..960465Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1575043694:956451..958635TCONS_00001199-exon-sc0000007-1575043694:956451..958635Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1510915933:960598..960770TCONS_00001199-exon-sc0000007-1510915933:960598..960770Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1510915933:958801..960465TCONS_00001199-exon-sc0000007-1510915933:958801..960465Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1510915933:956451..958635TCONS_00001199-exon-sc0000007-1510915933:956451..958635Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1491911889:960598..960770TCONS_00001199-exon-sc0000007-1491911889:960598..960770Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1491911889:958801..960465TCONS_00001199-exon-sc0000007-1491911889:958801..960465Clytia hemisphaericaexon
TCONS_00001199-exon-sc0000007-1491911889:956451..958635TCONS_00001199-exon-sc0000007-1491911889:956451..958635Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:956451..960770 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.147863 0.222695 0.179085 0.0901529 0 0 1.49376 1.8657 6.03351 6.74598 4.92397 8.48004 0.317169 0.364694 0.0739476 0.0793571 0.0558637 0.178933 0.672398 0.662227 0.0629558 0.105283 0.135425 0.105796 0.119845 0.273584 0.153616 0.267042 0.0582543 0.110117
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001199 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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