Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

TCONS_00001194 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001194
Unique NameTCONS_00001194
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2133

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001194 ID=TCONS_00001194|Name=TCONS_00001194|organism=Clytia hemisphaerica|type=transcript|length=2133bp
AGAATATGAGGGTTAATTGAGCGTGCTATGAAACTGCAGGTGAAACAAAC
GTTTTCTTCAGCATTAattaatgaaacaaaaaaaacttcgaattagaaaa
aaagtttaccCTCATAaaggataaaatttctattttttcttgataattgg
gggtaataaaaacaaacaatgaGGATATTGTTATATTTCTTATTATTGGG
ACTGGCACTAGACCACGCGTACAGTATTCCCATCGCACGTGGTGAGGAGA
ATGATGAACTTTTGGAAGTGAGAATCAACGAAGAAGATGCAGGAGATGAA
TTGGAGAATGAAGAAGAAACCACAGCCGAAGaaTCAGGGAGTGGAAGTGG
CagcaaaagaaatttgattgaAGAAGAAgtcaaagaagaagatgaagctC
CTGAAGgagagAGCGACGAAGCAGTCGGCAAAGATGCCATCACGAAAGCT
GATGATATTCCCGACGAAGGCGACAACCAAGACGACGAAGCTGATGACAA
TCAAGAAAAAGAGAgtcaagaagaaaaagaagaatctAAAAAGCCAGAAG
AAGAAGACAGTTCTTCAAAAACAGAACTGACCAAAAAAACTGAGGTCCCT
TCAATGGAAGGTGAAGAGGAGCCAGCAGAAAGCAGCGAAGAAGGAAACAC
TAGTGAAGAGAATGACGGAGCCAATGAAGAAAACCAGGACCAATCTGACG
AAGAAGCGGAAGAGGGAGAAGATACGGGCAACAAACGATCTGATCTCTGC
AAAAGATCACCATACGGTGGTGGTTGCGGTGAAGAAGGTCACGAAGAGGG
ACACGAAGGACACGGTCACCATCACGGTCATCATGAACACGAACATGGAC
ACCACCATCATGGACATCACCATGGTTTCGTGCATGAATGGGGAGAAGAA
GAAGGAGGCGGTCACCACGGTCACCAAGGACACGGTCACCATGAAGGCCA
TCATGAACATGAGCACGAACACGAGCATGGATATGGTGGTCACGAAGGAA
TTGGCCATCACGGAGGATATGGAGGCGGTGGCATGGGAGGCGGCGGCGGT
GGTTATGGAGATGGAGGATACGGTGGTGGTTATGGCGgaggcggcggcgg
cggtggcTGCGGAGGTGGATGTGGCGGTGGATGGGGTCGATCCAGTGTCT
TACAACAAGCTCCACCCATGGCTTTCCATTGCAGAGATATGGTCAGTAAA
GACGGTAAGAAACATACCAAACGTTTCTGTGTACCCATTGGTCATTATGG
TGGTTATGGATGGCCTTATTTCCATGGTTACCCTGGCACTGGTCTTGGCC
AATGGGGATGGGGATTCCCTTGGATCAAATCGAAAGTTGAAGGATCCAAA
GGGGTGAAAGCCAAAGATAGCAAGAAGGAGGAGAAAACCACTAAGAAAGA
GCAACGTGATCATATCACCAAGAAACAAACCGTTCATGTTGGTTATGGAT
ATGCCAGTGGAGATAACTACCGACTTGGATTCCAAACAGGTGGTATGGGA
GGTCTTGCATCAACTTTCACGGGTCACTTAGGTCCAGCAACTATCCCaga
acatttcaaaaaatctgttattaACAAACGTCAATTTGGCTTCAGTGGCC
CTGGTGCTGGACCCGCAGGCCCAGTCGGAGCAGGACCAGTCGACGCACCA
GGATATGGTGGCCACTCAACTCCATACGGTCATCCAGTCACGCACCCTGG
GTTTACCACTATGGGATTCCCAGGACACGCTCTTGCCTCTACTGACGTCA
GAAGTGGAATTCAACGACCAAAACGAGAACTAGATGCAGAGCAATATCCA
GAAGCCGTCATCCCTGAAGATAACTTTGAAGTAGAAGACCCCGAAAAAGA
ATTCGCTAACTATCAATATTACGAACAACAACCAGTAGAACACGAAGACA
ATGAAAATACCTTCTTATACACTGCTGAATAAACCAATCGgcaaCGCTTA
TCAAAGAATACACCCAACACCACCCAGATAGTCACACATATCttataatt
atattttttaacaaatcttAACTATTTTGTAATATCTGTAGTataataaa
aaattacaaataaaatgaattatGTCTGCTCTACGTCTTCTTTGCGTTCG
ATATATCATGTTGTTGAGTACGTCGAGTTTATC
Run BLAST on NCBI

protein sequence of TCONS_00001194-protein

>TCONS_00001194-protein ID=TCONS_00001194-protein|Name=TCONS_00001194-protein|organism=Clytia hemisphaerica|type=polypeptide|length=587bp
MRILLYFLLLGLALDHAYSIPIARGEENDELLEVRINEEDAGDELENEEE
TTAEESGSGSGSKRNLIEEEVKEEDEAPEGESDEAVGKDAITKADDIPDE
GDNQDDEADDNQEKESQEEKEESKKPEEEDSSSKTELTKKTEVPSMEGEE
EPAESSEEGNTSEENDGANEENQDQSDEEAEEGEDTGNKRSDLCKRSPYG
GGCGEEGHEEGHEGHGHHHGHHEHEHGHHHHGHHHGFVHEWGEEEGGGHH
GHQGHGHHEGHHEHEHEHEHGYGGHEGIGHHGGYGGGGMGGGGGGYGDGG
YGGGYGGGGGGGGCGGGCGGGWGRSSVLQQAPPMAFHCRDMVSKDGKKHT
KRFCVPIGHYGGYGWPYFHGYPGTGLGQWGWGFPWIKSKVEGSKGVKAKD
SKKEEKTTKKEQRDHITKKQTVHVGYGYASGDNYRLGFQTGGMGGLASTF
TGHLGPATIPEHFKKSVINKRQFGFSGPGAGPAGPVGAGPVDAPGYGGHS
TPYGHPVTHPGFTTMGFPGHALASTDVRSGIQRPKRELDAEQYPEAVIPE
DNFEVEDPEKEFANYQYYEQQPVEHEDNENTFLYTAE
Run BLAST on NCBI

transcript from alignment at sc0000007:919249..922385-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001194 ID=TCONS_00001194|Name=TCONS_00001194|organism=Clytia hemisphaerica|type=transcript|length=3137bp|location=Sequence derived from alignment at sc0000007:919249..922385- (Clytia hemisphaerica)
AGAATATGAGGGTTAATTGAGCGTGCTATGAAACTGCAGGTGAAACAAAC GTTTTCTTCAGCATTAATTAATGAAACAAAAAAAACTTCGAATTAGAAAA AAAGTTTACCCTCATAAAGGATAAAATTTCTATTTTTTCTTGATAATTGG GGGTAATAAAAACAAACAATGAGGATATTGTTATATTTCTTATTATTGGG ACTGGCACTAGACCACGCGTACAGTATTCCCATCGCACGTGGTGAGGAGA ATGATGAACTTTTGGAAGTGAGAATCAACGAAGAAGATGCAGGAGATGAA TTGGAGAATGAAGAAGAAACCACAGCCGAAGGTATGTCATCACTTTCCTG ACGTCCGTCATCTGATAAGCTTCTCCGATTATCTCTAAGCGACATCATTC AAGATCCAGTTGAAATAATACAAACGAACCAAACTTCATGGGCTATTCTC CTTATTTCGCGTGAATAAAACCTTTGGATAATTAAATGGCCAAAATGATG CGAAAATACCACTTCGTAATCATTTTGTATTCGCTAAACCTTCCAGTATA TCAGTAGTAATGCAAGTATTTGTACAACCTTTGTTTCCCTTAGTCCTTAG TAGCAATATGAGCGGTGATGGCTCAAGGTTCATAATGATGATTTTAAACC AATAGTCGGTATCTTTAAAAATTCACGGTGTCGTTCAAAAACACCTGGTC TCATACACGTAGAAACTCATAAACATTTTATCAGATGCGTGATAAAGAGT TATTAAAATTAAAACATAATACTATGGAATAAGGTATCATATTTTTCATT TTTCTTTCTATAGAATCAGGGAGTGGAAGTGGCAGCAAAAGAAATTTGAT TGAAGAAGAAGTCAAAGAAGAAGATGAAGCTCCTGAAGGAGAGGTAAAAT TTTCTTCCGTAGTTAATTTCGAGCAGCATCCTCCTTCTAAGTCATGGTTT TTGATTTGCTAAATAATTTAAGGTTGTTATCCCGTCTGTTATAATGATAC CAGGTAGAAGTATTTTAGAAACGTGTAGACATTGATTTTCAGAAGATATC TTCCATCTAAAATGTTGGTATATGATGACACTAACACGTCACAGGTTGTA ACTAACTTCAATAGAGTATAGTTTCTTTGCATTTTGGTTAGACCTCATTA TTATTAATCTGTAGAGCGACGAAGCAGTCGGCAAAGATGCCATCACGAAA GCTGATGATATTCCCGACGAAGGCGACAACCAAGACGACGAAGCTGATGA CAATCAAGAAAAAGAGAGTCAAGAAGAAAAAGAAGAATCTAAAAAGCCAG AAGAAGAAGACAGTTCTTCAAAAACAGAACTGACCAAAAAAACTGAGGTC CCTTCAATGGAAGGTGAAGAGGAGCCAGCAGAAAGCAGCGAAGAAGGAAA CACTAGTGAAGAGAATGACGGAGCCAATGAAGAAAACCAGGACCAATCTG ACGAAGAAGCGGAAGAGGGAGAAGATACGGGCAACAAACGATCTGATCTC TGCAAAAGATCACCATACGGTGGTGGTTGCGGTGAAGAAGGTCACGAAGA GGGACACGAAGGACACGGTCACCATCACGGTCATCATGAACACGAACATG GACACCACCATCATGGACATCACCATGGTTTCGTGCATGAATGGGGAGAA GAAGAAGGAGGCGGTCACCACGGTCACCAAGGACACGGTCACCATGAAGG CCATCATGAACATGAGCACGAACACGAGCATGGATATGGTGGTCACGAAG GAATTGGCCATCACGGAGGATATGGAGGCGGTGGCATGGGAGGCGGCGGC GGTGGTTATGGAGATGGAGGATACGGTGGTGGTTATGGCGGAGGCGGCGG CGGCGGTGGCTGCGGAGGTGGATGTGGCGGTGGATGGGGTCGATCCAGTG TCTTACAACAAGCTCCACCCATGGCTTTCCATTGCAGAGATATGGTCAGT AAAGACGGTAAGAAACATACCAAACGTTTCTGTGTACCCATTGGTCATTA TGGTGGTTATGGATGGCCTTATTTCCATGGTTACCCTGGCACTGGTCTTG GCCAATGGGGATGGGGATTCCCTTGGATCAAATCGAAAGTTGAAGGATCC AAAGGGGTGAAAGCCAAAGATAGCAAGAAGGAGGAGAAAACCACTAAGAA AGAGCAACGTGATCATATCACCAAGAAACAAACCGTTCATGTTGGTTATG GATATGCCAGTGGAGATAACTACCGACTTGGATTCCAAACAGGTGGTATG GGAGGTCTTGCATCAACTTTCACGGGTCACTTAGGTCCAGCAACTATCCC AGAACATTTCAAAAAATCTGTTATTAACAAACGTCAATTTGGCTTCAGTG GCCCTGGTGCTGGACCCGCAGGCCCAGTCGGAGCAGGACCAGTCGACGCA CCAGGATATGGTGGCCACTCAACTCCATACGGTCATCCAGTCACGCACCC TGGGTTTACCACTATGGGATTCCCAGGACACGCTCTTGCCTCTACTGACG TCAGAAGTGGAATTCAACGACCAAAACGAGAACTAGATGCAGAGCAATAT CCAGAAGCCGTCATCCCTGAAGATAACTTTGAAGTAGAAGACCCCGAAAA AGAATTCGCTAACTATCAATATTACGAACAACAACCAGTAGAACACGAAG ACAATGAAAATACCTTCTTATACACTGCTGAATAAACCAATCGGTGAGTA CGCTACTATCTTGTTATCACTCGCTTTTGATTGGATTCTTCTTCAACTCG TCTAAAAAGAAAGAAAATGAGTTCTTGTTCTTCTCCACAGCACGTGACAT TTACAGTATGATACAGTTCTTCCTCATTTTTTGACCTGATTATTTTCATT GTGTTCATAAATTCGAAGTGTCATTAACTTCAAAAGAAAATGATTCTTAA AATTGGGAGTCTGAAAATTAAATCATGATTTTCTTTTTTTTCAGGCAACG CTTATCAAAGAATACACCCAACACCACCCAGATAGTCACACATATCTTAT AATTATATTTTTTAACAAATCTTAACTATTTTGTAATATCTGTAGTATAA TAAAAAATTACAAATAAAATGAATTATGTCTGCTCTACGTCTTCTTTGCG TTCGATATATCATGTTGTTGAGTACGTCGAGTTTATC

Coding sequence (CDS) from alignment at sc0000007:919249..922385-

>TCONS_00001194 ID=TCONS_00001194|Name=TCONS_00001194|organism=Clytia hemisphaerica|type=CDS|length=5292bp|location=Sequence derived from alignment at sc0000007:919249..922385- (Clytia hemisphaerica)
AGCGACGAAGCAGTCGGCAAAGATGCCATCACGAAAGCTGATGATATTCC
CGACGAAGGCGACAACCAAGACGACGAAGCTGATGACAATCAAGAAAAAG
AGAGTCAAGAAGAAAAAGAAGAATCTAAAAAGCCAGAAGAAGAAGACAGT
TCTTCAAAAACAGAACTGACCAAAAAAACTGAGGTCCCTTCAATGGAAGG
TGAAGAGGAGCCAGCAGAAAGCAGCGAAGAAGGAAACACTAGTGAAGAGA
ATGACGGAGCCAATGAAGAAAACCAGGACCAATCTGACGAAGAAGCGGAA
GAGGGAGAAGATACGGGCAACAAACGATCTGATCTCTGCAAAAGATCACC
ATACGGTGGTGGTTGCGGTGAAGAAGGTCACGAAGAGGGACACGAAGGAC
ACGGTCACCATCACGGTCATCATGAACACGAACATGGACACCACCATCAT
GGACATCACCATGGTTTCGTGCATGAATGGGGAGAAGAAGAAGGAGGCGG
TCACCACGGTCACCAAGGACACGGTCACCATGAAGGCCATCATGAACATG
AGCACGAACACGAGCATGGATATGGTGGTCACGAAGGAATTGGCCATCAC
GGAGGATATGGAGGCGGTGGCATGGGAGGCGGCGGCGGTGGTTATGGAGA
TGGAGGATACGGTGGTGGTTATGGCGGAGGCGGCGGCGGCGGTGGCTGCG
GAGGTGGATGTGGCGGTGGATGGGGTCGATCCAGTGTCTTACAACAAGCT
CCACCCATGGCTTTCCATTGCAGAGATATGGTCAGTAAAGACGGTAAGAA
ACATACCAAACGTTTCTGTGTACCCATTGGTCATTATGGTGGTTATGGAT
GGCCTTATTTCCATGGTTACCCTGGCACTGGTCTTGGCCAATGGGGATGG
GGATTCCCTTGGATCAAATCGAAAGTTGAAGGATCCAAAGGGGTGAAAGC
CAAAGATAGCAAGAAGGAGGAGAAAACCACTAAGAAAGAGCAACGTGATC
ATATCACCAAGAAACAAACCGTTCATGTTGGTTATGGATATGCCAGTGGA
GATAACTACCGACTTGGATTCCAAACAGGTGGTATGGGAGGTCTTGCATC
AACTTTCACGGGTCACTTAGGTCCAGCAACTATCCCAGAACATTTCAAAA
AATCTGTTATTAACAAACGTCAATTTGGCTTCAGTGGCCCTGGTGCTGGA
CCCGCAGGCCCAGTCGGAGCAGGACCAGTCGACGCACCAGGATATGGTGG
CCACTCAACTCCATACGGTCATCCAGTCACGCACCCTGGGTTTACCACTA
TGGGATTCCCAGGACACGCTCTTGCCTCTACTGACGTCAGAAGTGGAATT
CAACGACCAAAACGAGAACTAGATGCAGAGCAATATCCAGAAGCCGTCAT
CCCTGAAGATAACTTTGAAGTAGAAGACCCCGAAAAAGAATTCGCTAACT
ATCAATATTACGAACAACAACCAGTAGAACACGAAGACAATGAAAATACC
TTCTTATACACTGCTGAATAAAATCAGGGAGTGGAAGTGGCAGCAAAAGA
AATTTGATTGAAGAAGAAGTCAAAGAAGAAGATGAAGCTCCTGAAGGAGA
GATGAGGATATTGTTATATTTCTTATTATTGGGACTGGCACTAGACCACG
CGTACAGTATTCCCATCGCACGTGGTGAGGAGAATGATGAACTTTTGGAA
GTGAGAATCAACGAAGAAGATGCAGGAGATGAATTGGAGAATGAAGAAGA
AACCACAGCCGAAGAGCGACGAAGCAGTCGGCAAAGATGCCATCACGAAA
GCTGATGATATTCCCGACGAAGGCGACAACCAAGACGACGAAGCTGATGA
CAATCAAGAAAAAGAGAGTCAAGAAGAAAAAGAAGAATCTAAAAAGCCAG
AAGAAGAAGACAGTTCTTCAAAAACAGAACTGACCAAAAAAACTGAGGTC
CCTTCAATGGAAGGTGAAGAGGAGCCAGCAGAAAGCAGCGAAGAAGGAAA
CACTAGTGAAGAGAATGACGGAGCCAATGAAGAAAACCAGGACCAATCTG
ACGAAGAAGCGGAAGAGGGAGAAGATACGGGCAACAAACGATCTGATCTC
TGCAAAAGATCACCATACGGTGGTGGTTGCGGTGAAGAAGGTCACGAAGA
GGGACACGAAGGACACGGTCACCATCACGGTCATCATGAACACGAACATG
GACACCACCATCATGGACATCACCATGGTTTCGTGCATGAATGGGGAGAA
GAAGAAGGAGGCGGTCACCACGGTCACCAAGGACACGGTCACCATGAAGG
CCATCATGAACATGAGCACGAACACGAGCATGGATATGGTGGTCACGAAG
GAATTGGCCATCACGGAGGATATGGAGGCGGTGGCATGGGAGGCGGCGGC
GGTGGTTATGGAGATGGAGGATACGGTGGTGGTTATGGCGGAGGCGGCGG
CGGCGGTGGCTGCGGAGGTGGATGTGGCGGTGGATGGGGTCGATCCAGTG
TCTTACAACAAGCTCCACCCATGGCTTTCCATTGCAGAGATATGGTCAGT
AAAGACGGTAAGAAACATACCAAACGTTTCTGTGTACCCATTGGTCATTA
TGGTGGTTATGGATGGCCTTATTTCCATGGTTACCCTGGCACTGGTCTTG
GCCAATGGGGATGGGGATTCCCTTGGATCAAATCGAAAGTTGAAGGATCC
AAAGGGGTGAAAGCCAAAGATAGCAAGAAGGAGGAGAAAACCACTAAGAA
AGAGCAACGTGATCATATCACCAAGAAACAAACCGTTCATGTTGGTTATG
GATATGCCAGTGGAGATAACTACCGACTTGGATTCCAAACAGGTGGTATG
GGAGGTCTTGCATCAACTTTCACGGGTCACTTAGGTCCAGCAACTATCCC
AGAACATTTCAAAAAATCTGTTATTAACAAACGTCAATTTGGCTTCAGTG
GCCCTGGTGCTGGACCCGCAGGCCCAGTCGGAGCAGGACCAGTCGACGCA
CCAGGATATGGTGGCCACTCAACTCCATACGGTCATCCAGTCACGCACCC
TGGGTTTACCACTATGGGATTCCCAGGACACGCTCTTGCCTCTACTGACG
TCAGAAGTGGAATTCAACGACCAAAACGAGAACTAGATGCAGAGCAATAT
CCAGAAGCCGTCATCCCTGAAGATAACTTTGAAGTAGAAGACCCCGAAAA
AGAATTCGCTAACTATCAATATTACGAACAACAACCAGTAGAACACGAAG
ACAATGAAAATACCTTCTTATACACTGCTGAATAAAATCAGGGAGTGGAA
GTGGCAGCAAAAGAAATTTGATTGAAGAAGAAGTCAAAGAAGAAGATGAA
GCTCCTGAAGGAGAGATGAGGATATTGTTATATTTCTTATTATTGGGACT
GGCACTAGACCACGCGTACAGTATTCCCATCGCACGTGGTGAGGAGAATG
ATGAACTTTTGGAAGTGAGAATCAACGAAGAAGATGCAGGAGATGAATTG
GAGAATGAAGAAGAAACCACAGCCGAAGAGCGACGAAGCAGTCGGCAAAG
ATGCCATCACGAAAGCTGATGATATTCCCGACGAAGGCGACAACCAAGAC
GACGAAGCTGATGACAATCAAGAAAAAGAGAGTCAAGAAGAAAAAGAAGA
ATCTAAAAAGCCAGAAGAAGAAGACAGTTCTTCAAAAACAGAACTGACCA
AAAAAACTGAGGTCCCTTCAATGGAAGGTGAAGAGGAGCCAGCAGAAAGC
AGCGAAGAAGGAAACACTAGTGAAGAGAATGACGGAGCCAATGAAGAAAA
CCAGGACCAATCTGACGAAGAAGCGGAAGAGGGAGAAGATACGGGCAACA
AACGATCTGATCTCTGCAAAAGATCACCATACGGTGGTGGTTGCGGTGAA
GAAGGTCACGAAGAGGGACACGAAGGACACGGTCACCATCACGGTCATCA
TGAACACGAACATGGACACCACCATCATGGACATCACCATGGTTTCGTGC
ATGAATGGGGAGAAGAAGAAGGAGGCGGTCACCACGGTCACCAAGGACAC
GGTCACCATGAAGGCCATCATGAACATGAGCACGAACACGAGCATGGATA
TGGTGGTCACGAAGGAATTGGCCATCACGGAGGATATGGAGGCGGTGGCA
TGGGAGGCGGCGGCGGTGGTTATGGAGATGGAGGATACGGTGGTGGTTAT
GGCGGAGGCGGCGGCGGCGGTGGCTGCGGAGGTGGATGTGGCGGTGGATG
GGGTCGATCCAGTGTCTTACAACAAGCTCCACCCATGGCTTTCCATTGCA
GAGATATGGTCAGTAAAGACGGTAAGAAACATACCAAACGTTTCTGTGTA
CCCATTGGTCATTATGGTGGTTATGGATGGCCTTATTTCCATGGTTACCC
TGGCACTGGTCTTGGCCAATGGGGATGGGGATTCCCTTGGATCAAATCGA
AAGTTGAAGGATCCAAAGGGGTGAAAGCCAAAGATAGCAAGAAGGAGGAG
AAAACCACTAAGAAAGAGCAACGTGATCATATCACCAAGAAACAAACCGT
TCATGTTGGTTATGGATATGCCAGTGGAGATAACTACCGACTTGGATTCC
AAACAGGTGGTATGGGAGGTCTTGCATCAACTTTCACGGGTCACTTAGGT
CCAGCAACTATCCCAGAACATTTCAAAAAATCTGTTATTAACAAACGTCA
ATTTGGCTTCAGTGGCCCTGGTGCTGGACCCGCAGGCCCAGTCGGAGCAG
GACCAGTCGACGCACCAGGATATGGTGGCCACTCAACTCCATACGGTCAT
CCAGTCACGCACCCTGGGTTTACCACTATGGGATTCCCAGGACACGCTCT
TGCCTCTACTGACGTCAGAAGTGGAATTCAACGACCAAAACGAGAACTAG
ATGCAGAGCAATATCCAGAAGCCGTCATCCCTGAAGATAACTTTGAAGTA
GAAGACCCCGAAAAAGAATTCGCTAACTATCAATATTACGAACAACAACC
AGTAGAACACGAAGACAATGAAAATACCTTCTTATACACTGCTGAATAAA
ATCAGGGAGTGGAAGTGGCAGCAAAAGAAATTTGATTGAAGAAGAAGTCA
AAGAAGAAGATGAAGCTCCTGAAGGAGAGATGAGGATATTGTTATATTTC
TTATTATTGGGACTGGCACTAGACCACGCGTACAGTATTCCCATCGCACG
TGGTGAGGAGAATGATGAACTTTTGGAAGTGAGAATCAACGAAGAAGATG
CAGGAGATGAATTGGAGAATGAAGAAGAAACCACAGCCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000648XLOC_000648Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001194-proteinTCONS_00001194-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001194-exon-sc0000007-1575043694:922055..922385TCONS_00001194-exon-sc0000007-1575043694:922055..922385Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1575043694:921493..921572TCONS_00001194-exon-sc0000007-1575043694:921493..921572Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1575043694:919693..921221TCONS_00001194-exon-sc0000007-1575043694:919693..921221Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1575043694:919249..919441TCONS_00001194-exon-sc0000007-1575043694:919249..919441Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1510915933:922055..922385TCONS_00001194-exon-sc0000007-1510915933:922055..922385Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1510915933:921493..921572TCONS_00001194-exon-sc0000007-1510915933:921493..921572Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1510915933:919693..921221TCONS_00001194-exon-sc0000007-1510915933:919693..921221Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1510915933:919249..919441TCONS_00001194-exon-sc0000007-1510915933:919249..919441Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1491911889:922055..922385TCONS_00001194-exon-sc0000007-1491911889:922055..922385Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1491911889:921493..921572TCONS_00001194-exon-sc0000007-1491911889:921493..921572Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1491911889:919693..921221TCONS_00001194-exon-sc0000007-1491911889:919693..921221Clytia hemisphaericaexon
TCONS_00001194-exon-sc0000007-1491911889:919249..919441TCONS_00001194-exon-sc0000007-1491911889:919249..919441Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:919249..922385 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.202835 0.0539445 0.521956 0.306391 1.56661 1.80781 98.5736 104.712 33.7811 30.8917 85.5998 69.0541 154.705 130.186 106.015 302.623 154.773 148.592 0.392034 0.3487 89.7483 94.3873 88.5235 81.5571 142.069 160.117 16.2578 4.85714 0.306997 0.521303
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001194 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top