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TCONS_00001172 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001172
Unique NameTCONS_00001172
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1265

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001172 ID=TCONS_00001172|Name=TCONS_00001172|organism=Clytia hemisphaerica|type=transcript|length=1265bp
TTGAGGTCCTACTATTTTACTTCCAACGAGTAAGTTAGAGGGTTTCAGAA
CTTGTTTGAATGACAATGAAGATAATATTTGTTCTTTTTACTTGCTTCAT
TTATGAAGCATCAACAATACAATTGCCATCAAGTTGTCCAGACCTTCCCT
TCCACGATATTCCAACAGATCACCTGTTCCACAAGAAAGTGAAACCACTG
GTCATCGCACACCGTGGTTTACCCAAGGAATACCAGGAGAACACGTACGA
TGGAATCATCGCTTCACTGGATTCACACGCTGATGGATTCGAATTAGATA
TTTACAAAACAAAAGATGACCAATTAGTCGTCTTTCATGATGACAACACT
ATGCGGATGACAGGTGTAAGCAAGGTGGTGTACAACAGCACTTACCAAGA
ATTACTGGAGCTGAATATCACTGACACCATAGTCAAAGGTGGTAATACGT
ACACGTTTGGTAAGAAGAGAAAGATCCCTTTACTGGAAGACATTTTGAAA
GTCACCTCCAAACATGATATTCTTCACTATCTAGagATGAAACCAAGTGA
ACCATTACGACCGCACGAACTTCAGTTAGCTAAAGATACCGCCCGATTGG
TCGCTCAGATTATTGAGAAAATGGGACTAGTTAAAAAGGCTATCATTGTC
TCTTTCGACTTCCGGAAAGTGAAAGTGGTGAAAGCCATCAACCCTAACAT
CACAGTCGGTACTTTGTTCTCGCAAAAGTTCGCCGACAAACCAAAAAGCC
GATACCTTGAGATGAAAGAGCTCGGGAATTTAGAACAGTGTGTAAAAGAC
GGACCCGAAGATACGTTGGAATTCTTTAAATTCGTTCTTCAGTCTGGGCT
GTTCTTTAAACAAGCTGGCAGTTCGTCTTTTGATTGTGACATCAAGTTGT
ACAACAACCCAAAGTATTTGAATAAAACCCTTCCAACGTTACGCCAGAAC
TACAGTCGTACGGTGAGCACAGGCTTTTACACCATTTACAGCATGGGAAA
AACAGAGGAACAACATCTCATTGATGAACGTAAGGCTCTCCAATTGATCA
AGCAAGGTGGTGGTCAGCGCTTCATTACGGATGACGTTAAACGAGCGCGC
AGCTTGCTGGGAAAAAGCTCTTCTGCAGGAACAATTTTGAAGATGAACTC
TTTTATAatctgtttaaatttttttgtttttcaatttcatttttaactaG
TTACTTTTTTCAGCTGTActgctaaaatttgaaaaataaatttcagccAG
CGATGTGTatttttt
Run BLAST on NCBI

protein sequence of TCONS_00001172-protein

>TCONS_00001172-protein ID=TCONS_00001172-protein|Name=TCONS_00001172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
MTMKIIFVLFTCFIYEASTIQLPSSCPDLPFHDIPTDHLFHKKVKPLVIA
HRGLPKEYQENTYDGIIASLDSHADGFELDIYKTKDDQLVVFHDDNTMRM
TGVSKVVYNSTYQELLELNITDTIVKGGNTYTFGKKRKIPLLEDILKVTS
KHDILHYLEMKPSEPLRPHELQLAKDTARLVAQIIEKMGLVKKAIIVSFD
FRKVKVVKAINPNITVGTLFSQKFADKPKSRYLEMKELGNLEQCVKDGPE
DTLEFFKFVLQSGLFFKQAGSSSFDCDIKLYNNPKYLNKTLPTLRQNYSR
TVSTGFYTIYSMGKTEEQHLIDERKALQLIKQGGGQRFITDDVKRARSLL
GKSSSAGTILKMNSFIICLNFFVFQFHF
Run BLAST on NCBI

transcript from alignment at sc0000007:683922..688724-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001172 ID=TCONS_00001172|Name=TCONS_00001172|organism=Clytia hemisphaerica|type=transcript|length=4803bp|location=Sequence derived from alignment at sc0000007:683922..688724- (Clytia hemisphaerica)
TTGAGGTCCTACTATTTTACTTCCAACGAGTAAGTTAGAGGGTTTCAGAA CTTGTTTGAATGACAATGAAGATAATATTTGTTCTTTTTACTTGCTTCAT TTATGAAGGTATTATAGTTAGTTTCTAAAATTTCTAACTTAATTAGTTTC ACGCTAAATTTATTATTTTATTAAACACATGGTTTTCATCTTAAATAAAA TTTCAACCAAAGTTCTGTATGGTGACCAAGCTCAAGCTACTTATTTGTCC ATGCAACTTTATATCATTGAAAAGAAAATTGTTTTTTTCATAGCATCAAC AATACAATTGCCATCAAGTTGTCCAGACCTTCCCTTCCACGATATTCCAA CAGATCACCTGTTCCACAAGAAAGTGAAACCACTGGTCATCGCACACCGT GGTTTACCCAAGGAATACCAGGAGAACACGTACGATGGAATCATCGCTTC ACTGGATTCACACGCTGATGGATTCGAATTAGATATTTACAAAACAAAAG ATGACCAATTAGTCGTCTTTCATGATGACAACACTATGGTAATTCTGAGC GTATATGTTTCTTTTTTGTCAAGCAAGTGTCTTCCCCTTTATCAGGCTCG CATTATACTTAGGTACATTGTTTAGGTACCAAAACTGATCCTGCATATGC TTATAAACGTTATGCTTATAGAAAAAAACACTATCTAAACAAATAATTGT TGAATCAGGTAATACGGTAATTTAAAAAGTTTAACTTTTTTTGTTCATAA ACCACTATAGTGTGAACCCTCCATAATCTTTCTTATCTTGACTGATAATA GTGGTAGCGGTGTGATCGGACAATCTGTTCAGGGGAACAATACTCTTAAG GCCGGTGTCCACTTTCGCGCGAAGCGTTATTANCGATATTGCCCTCCGGA CATTCGTTTCTCCATACAAAACTTGGGAAATTAATGTTTATCTACCGTCC GATTCTATACCTTTATCGGGAATCTTAATGTCCAAAGAAAACTTAGGAAA CTTATGGGACATGACTGGTCAAAATCGATTACATTAAAGCATAATGGATA CTATCCGTGGATATCTGAGATAAAGGTTTTTAAACCATTTGCTAAAATCC TTAGAAATGGTTTAATCGGCCATCATAGACTTTCTCCCAAATTCTTGCCT GTATCTTACACGTATAACAAAAGAGGTCCTAGTCTATATAAAACACTAGA TAGAGCTTCTGGTCAAAATACTTCAACATTTAAAACAAGTGTCTTCTACT GTGGTCAAATTTTACCAAAGATGGCGTATTATTTTGCTTCCCTTTTCGTG GCTAAGGAAAGATAGAAATGTTCTATCAAGTGTTTTATATAAGATATCTG TGAGAATAGCCCGTTCATCGATATAATGAATTCTATTTTATTTCTAGATG ATGAGTATGACCCATTTAGACGATACCAATCGAGTTGAAGAAATAATGAT GGACTAAAATACCGAACCATGCTGTCTGAAATTTACCGAACAGATAAAAA AAGAAAGACACGAGGTCTACCATTATTTTGTTTTTACATATTCTTATTTT GTTTCGTTCGTTGTTAAATGACGTCATTTTTACCATTACATCATTATTTC ATCATGGTAACATGGCAGACTTTTCACTCTTCCAAAAGAGCAGAACAAAA TGAGTAAAACACTGCATGTTCTCCATGAAGCATGTTGACGTCACGAAATT TTCATGTTGATGAATTTTTGATGACGTATAACTTCTTTGTGACCTAACTA TCAATCATGGGATGAATTTAGACAAATCTACTCAGCTATGCAAAAAATGA TATTGGGATTATCTACTCAAACAATGGACTCGACTGAATTATTCAGTCTT AACAAAAAGGAGCCTAATTAATTTTTCAAACTTTTACTTTTCCTTCTGTA GCGGATGACAGGTGTAAGCAAGGTGGTGTACAACAGCACTTACCAAGAAT TACTGGAGCTGAATATCACTGACACCATAGTCAAAGGTAAGGCTTCCTCT ATTTTCATTTTTCATCAAGTTTGTTTTTAATAGAGACTCTATAGGACTTC GCTGTCCTTTCGAGCAGAAATCTTTTTGCGATATTCACGAATTTGGAACT TTTTTTTGTGAAAGCATGAGTTTAATATAGACACTGGATAAACAACGTAT AAAACGGTGGAGAGCGAAGCATTGTCTTTCTTTTGTTTAAGAAAACAATC GAGGATCTAGCTTTGTCCGCAAAGGACAACTGCCATGGCGGCTCGAAGTT CTCTGATTTTGAAAAATGATTGATAATCTCATTTCTAAAAAGTCCTATCT TTATCTTTTTGTACTTTTACTCGCCAAAAATTTTAAAATAAATGCTAAAA TACTTAACGGATACATGTATTAAATCTGTTGTGACAAAAACATCATTAGA CAAGAAATATCAAACAAAAGGACTAAAATGACACAGAATTTTAAGTTGGC GATATTCTGTTAACATCTTTCTGAGAAGAGCTAAGATTGACATATATTAG ACTTGAGTGTCTTGGCTTCACCGTGGTATGAAAATATTTTTGAGGCCTCG TGGTGATCGGTGGTTTTATCGAGGTTAAAGTTTGAAAATTTTTGGTGTCA ACATTCAATTTTTTATACATAGCATGTTTTTCGTATCTTTCTTGCAACTT GAAACGTCATAACGACACATAATTAACAATTGTTTTGATGCGTTCGCCTC TCTAAGGAAAACTTAATTTTCATTTGGGAATTTAAATGACTGTGTTAAGA TGAAAAAAATGATTAAAATATTACAAAAAATCGTTTAATGAAGGAAGGAG AGTGAACAATAATGTCATTACTGCGGACAAGGCTAGAACATGAGAAATCA ATGAAAATATAGCTCGTTGTTTATCCAGTGTCTATAATAAATTCTTGGTG AAAGTCGATACCTGTTTTTATAAATCTTATGAGAAAGTTTGTTTTTTTTA GTTTCAATCTGAAGGAAAGGAAAATTAAATTTCAACAAGTTTCCTTCCTT ATCCTACCATCTTAAACTTTAAGGTTCCTCACCAACCGTTTGACATCAAG CTCGTCCGTTACAAAGATTCATTTATGATTATTTTCACCTCTTTAGGTGG TAATACGTACACGTTTGGTAAGAAGAGAAAGATCCCTTTACTGGAAGACA TTTTGAAAGTCACCTCCAAACATGATATTCTTCACTATCTAGAGGTAAAA ATAATTTCTTGAAAGTTACATGCCCGAAAATTTTCAAAGAAATACCGGGT GTCCCAGAAAATGTCCCCCTCTTTGAAATGAAATTTCTCGATTTCTATGA ACTGTTAAAGAATCAATACTTTTGCATTGAAAAAAGGAAGGATAAACTTA AATTTTGAGGTGGTTAACTACATCAAAAGTTATGACTTAAATGCTAAAAC ATTACTTTTCAAAAAAGTAAAAAAAAAGGCGAAAAACGAGGTTATTAAAT CATCATAAAGATATCATAAAGAAATCTTTCTTTTATCAATTTTATTAACG ATCAAAGTTTTTCTACGATGTCCTTTAATAAGGTGTCTTTATATTAATTC TCCTTTTGCTTTATTTGTTTAACTTGACGAACTTGCATGGGTATCATCAA GAGACATGATGCTTTTTCAAGCCCTAAGAATTTCAAAATCTTAGCAACAT TTTGTGTCTTTGTACAATAAATTTAATACCCTCATTTTCGCCTTTTTTGA TTTTTCTGAAAAGTAATATTTCAGCATTTAGGCCATAACTTTTGACGCAG CTAACCAAATTTGACAAACAACGCACTCGAAATTTAAGCTTATCCTTAAT CTTTCCAATGCAAAAAGATCGATTCTTTAACAGTTCATAGAACTCAGGAA ATTTCACTTAAAAAAGGGGGACTTTTTTCTGGGACACCCGTTACAATTGT TATTTAAATGAAATCTGATATAATTTTTTTTTTACTATTTTCTCCGGGTG TTTCCGATGAAAGATATGAAAGAATTCTTTGCTTACGCTTATCCAGAATA AATGAAGACTTGTTCTTTCAGATGAAACCAAGTGAACCATTACGACCGCA CGAACTTCAGTTAGCTAAAGATACCGCCCGATTGGTCGCTCAGATTATTG AGAAAATGGGACTAGTTAAAAAGGCTATCATTGTCTCTTTCGACTTCCGG AAAGTGAAAGTGGTGAAAGCCATCAACCCTAACATCACAGTCGGTACTTT GTTCTCGCAAAAGTTCGCCGACAAACCAAAAAGCCGATACCTTGAGATGA AAGAGCTCGGGAATTTAGAACAGTGTGTAAAAGACGGACCCGAAGATACG TTGGAATTCTTTAAATTCGTTCTTCAGTCTGGGCTGTTCTTTAAACAAGC TGGCAGTTCGTCTTTTGATTGTGACATCAAGTTGTACAACAACCCAAAGT ATTTGAATAAAACCCTTCCAACGTTACGCCAGAACTACAGTCGTACGGTG AGCACAGGTNTAATACCCTTCCAACGTTACGCCAAAACTACAGTCGTGCG GTGAGCACAGGCTTTTACACCATTTACAGCATGGGAAAAACAGAGGAACA ACATCTCATTGATGAACGTAAGGCTCTCCAATTGATCAAGCAAGGTGGTG GTCAGCGCTTCATTACGGATGACGTTAAACGAGCGCGCAGCTTGCTGGGA AAAAGCTCTTCTGCAGGAACAATTTTGAAGATGAACTCTTTTATAATCTG TTTAAATTTTTTTGTTTTTCAATTTCATTTTTAACTAGTTACTTTTTTCA GCTGTACTGCTAAAATTTGAAAAATAAATTTCAGCCAGCGATGTGTATTT TTT

Coding sequence (CDS) from alignment at sc0000007:683922..688724-

>TCONS_00001172 ID=TCONS_00001172|Name=TCONS_00001172|organism=Clytia hemisphaerica|type=CDS|length=6822bp|location=Sequence derived from alignment at sc0000007:683922..688724- (Clytia hemisphaerica)
GCTTTTACACCATTTACAGCATGGGAAAAACAGAGGAACAACATCTCATT
GATGAACGTAAGGCTCTCCAATTGATCAAGCAAGGTGGTGGTCAGCGCTT
CATTACGGATGACGTTAAACGAGCGCGCAGCTTGCTGGGAAAAAGCTCTT
CTGCAGGAACAATTTTGAAGATGAACTCTTTTATAATCTGTTTAAATTTT
TTTGTTTTTCAATTTCATTTTTAAATGAAACCAAGTGAACCATTACGACC
GCACGAACTTCAGTTAGCTAAAGATACCGCCCGATTGGTCGCTCAGATTA
TTGAGAAAATGGGACTAGTTAAAAAGGCTATCATTGTCTCTTTCGACTTC
CGGAAAGTGAAAGTGGTGAAAGCCATCAACCCTAACATCACAGTCGGTAC
TTTGTTCTCGCAAAAGTTCGCCGACAAACCAAAAAGCCGATACCTTGAGA
TGAAAGAGCTCGGGAATTTAGAACAGTGTGTAAAAGACGGACCCGAAGAT
ACGTTGGAATTCTTTAAATTCGTTCTTCAGTCTGGGCTGTTCTTTAAACA
AGCTGGCAGTTCGTCTTTTGATTGTGACATCAAGTTGTACAACAACCCAA
AGTATTTGAATAAAACCCTTCCAACGTTACGCCAGAACTACAGTCGTACG
GTGAGCACAGGTGGTAATACGTACACGTTTGGTAAGAAGAGAAAGATCCC
TTTACTGGAAGACATTTTGAAAGTCACCTCCAAACATGATATTCTTCACT
ATCTAGAGCGGATGACAGGTGTAAGCAAGGTGGTGTACAACAGCACTTAC
CAAGAATTACTGGAGCTGAATATCACTGACACCATAGTCAAAGCATCAAC
AATACAATTGCCATCAAGTTGTCCAGACCTTCCCTTCCACGATATTCCAA
CAGATCACCTGTTCCACAAGAAAGTGAAACCACTGGTCATCGCACACCGT
GGTTTACCCAAGGAATACCAGGAGAACACGTACGATGGAATCATCGCTTC
ACTGGATTCACACGCTGATGGATTCGAATTAGATATTTACAAAACAAAAG
ATGACCAATTAGTCGTCTTTCATGATGACAACACTATGATGACAATGAAG
ATAATATTTGTTCTTTTTACTTGCTTCATTTATGAAGGCTTTTACACCAT
TTACAGCATGGGAAAAACAGAGGAACAACATCTCATTGATGAACGTAAGG
CTCTCCAATTGATCAAGCAAGGTGGTGGTCAGCGCTTCATTACGGATGAC
GTTAAACGAGCGCGCAGCTTGCTGGGAAAAAGCTCTTCTGCAGGAACAAT
TTTGAAGATGAACTCTTTTATAATCTGTTTAAATTTTTTTGTTTTTCAAT
TTCATTTTTAAATGAAACCAAGTGAACCATTACGACCGCACGAACTTCAG
TTAGCTAAAGATACCGCCCGATTGGTCGCTCAGATTATTGAGAAAATGGG
ACTAGTTAAAAAGGCTATCATTGTCTCTTTCGACTTCCGGAAAGTGAAAG
TGGTGAAAGCCATCAACCCTAACATCACAGTCGGTACTTTGTTCTCGCAA
AAGTTCGCCGACAAACCAAAAAGCCGATACCTTGAGATGAAAGAGCTCGG
GAATTTAGAACAGTGTGTAAAAGACGGACCCGAAGATACGTTGGAATTCT
TTAAATTCGTTCTTCAGTCTGGGCTGTTCTTTAAACAAGCTGGCAGTTCG
TCTTTTGATTGTGACATCAAGTTGTACAACAACCCAAAGTATTTGAATAA
AACCCTTCCAACGTTACGCCAGAACTACAGTCGTACGGTGAGCACAGGTG
GTAATACGTACACGTTTGGTAAGAAGAGAAAGATCCCTTTACTGGAAGAC
ATTTTGAAAGTCACCTCCAAACATGATATTCTTCACTATCTAGAGCGGAT
GACAGGTGTAAGCAAGGTGGTGTACAACAGCACTTACCAAGAATTACTGG
AGCTGAATATCACTGACACCATAGTCAAAGCATCAACAATACAATTGCCA
TCAAGTTGTCCAGACCTTCCCTTCCACGATATTCCAACAGATCACCTGTT
CCACAAGAAAGTGAAACCACTGGTCATCGCACACCGTGGTTTACCCAAGG
AATACCAGGAGAACACGTACGATGGAATCATCGCTTCACTGGATTCACAC
GCTGATGGATTCGAATTAGATATTTACAAAACAAAAGATGACCAATTAGT
CGTCTTTCATGATGACAACACTATGATGACAATGAAGATAATATTTGTTC
TTTTTACTTGCTTCATTTATGAAGGCTTTTACACCATTTACAGCATGGGA
AAAACAGAGGAACAACATCTCATTGATGAACGTAAGGCTCTCCAATTGAT
CAAGCAAGGTGGTGGTCAGCGCTTCATTACGGATGACGTTAAACGAGCGC
GCAGCTTGCTGGGAAAAAGCTCTTCTGCAGGAACAATTTTGAAGATGAAC
TCTTTTATAATCTGTTTAAATTTTTTTGTTTTTCAATTTCATTTTTAAAT
GAAACCAAGTGAACCATTACGACCGCACGAACTTCAGTTAGCTAAAGATA
CCGCCCGATTGGTCGCTCAGATTATTGAGAAAATGGGACTAGTTAAAAAG
GCTATCATTGTCTCTTTCGACTTCCGGAAAGTGAAAGTGGTGAAAGCCAT
CAACCCTAACATCACAGTCGGTACTTTGTTCTCGCAAAAGTTCGCCGACA
AACCAAAAAGCCGATACCTTGAGATGAAAGAGCTCGGGAATTTAGAACAG
TGTGTAAAAGACGGACCCGAAGATACGTTGGAATTCTTTAAATTCGTTCT
TCAGTCTGGGCTGTTCTTTAAACAAGCTGGCAGTTCGTCTTTTGATTGTG
ACATCAAGTTGTACAACAACCCAAAGTATTTGAATAAAACCCTTCCAACG
TTACGCCAGAACTACAGTCGTACGGTGAGCACAGGTGGTAATACGTACAC
GTTTGGTAAGAAGAGAAAGATCCCTTTACTGGAAGACATTTTGAAAGTCA
CCTCCAAACATGATATTCTTCACTATCTAGAGCGGATGACAGGTGTAAGC
AAGGTGGTGTACAACAGCACTTACCAAGAATTACTGGAGCTGAATATCAC
TGACACCATAGTCAAAGCATCAACAATACAATTGCCATCAAGTTGTCCAG
ACCTTCCCTTCCACGATATTCCAACAGATCACCTGTTCCACAAGAAAGTG
AAACCACTGGTCATCGCACACCGTGGTTTACCCAAGGAATACCAGGAGAA
CACGTACGATGGAATCATCGCTTCACTGGATTCACACGCTGATGGATTCG
AATTAGATATTTACAAAACAAAAGATGACCAATTAGTCGTCTTTCATGAT
GACAACACTATGATGACAATGAAGATAATATTTGTTCTTTTTACTTGCTT
CATTTATGAAGGCTTTTACACCATTTACAGCATGGGAAAAACAGAGGAAC
AACATCTCATTGATGAACGTAAGGCTCTCCAATTGATCAAGCAAGGTGGT
GGTCAGCGCTTCATTACGGATGACGTTAAACGAGCGCGCAGCTTGCTGGG
AAAAAGCTCTTCTGCAGGAACAATTTTGAAGATGAACTCTTTTATAATCT
GTTTAAATTTTTTTGTTTTTCAATTTCATTTTTAAATGAAACCAAGTGAA
CCATTACGACCGCACGAACTTCAGTTAGCTAAAGATACCGCCCGATTGGT
CGCTCAGATTATTGAGAAAATGGGACTAGTTAAAAAGGCTATCATTGTCT
CTTTCGACTTCCGGAAAGTGAAAGTGGTGAAAGCCATCAACCCTAACATC
ACAGTCGGTACTTTGTTCTCGCAAAAGTTCGCCGACAAACCAAAAAGCCG
ATACCTTGAGATGAAAGAGCTCGGGAATTTAGAACAGTGTGTAAAAGACG
GACCCGAAGATACGTTGGAATTCTTTAAATTCGTTCTTCAGTCTGGGCTG
TTCTTTAAACAAGCTGGCAGTTCGTCTTTTGATTGTGACATCAAGTTGTA
CAACAACCCAAAGTATTTGAATAAAACCCTTCCAACGTTACGCCAGAACT
ACAGTCGTACGGTGAGCACAGGTGGTAATACGTACACGTTTGGTAAGAAG
AGAAAGATCCCTTTACTGGAAGACATTTTGAAAGTCACCTCCAAACATGA
TATTCTTCACTATCTAGAGCGGATGACAGGTGTAAGCAAGGTGGTGTACA
ACAGCACTTACCAAGAATTACTGGAGCTGAATATCACTGACACCATAGTC
AAAGCATCAACAATACAATTGCCATCAAGTTGTCCAGACCTTCCCTTCCA
CGATATTCCAACAGATCACCTGTTCCACAAGAAAGTGAAACCACTGGTCA
TCGCACACCGTGGTTTACCCAAGGAATACCAGGAGAACACGTACGATGGA
ATCATCGCTTCACTGGATTCACACGCTGATGGATTCGAATTAGATATTTA
CAAAACAAAAGATGACCAATTAGTCGTCTTTCATGATGACAACACTATGA
TGACAATGAAGATAATATTTGTTCTTTTTACTTGCTTCATTTATGAAGGC
TTTTACACCATTTACAGCATGGGAAAAACAGAGGAACAACATCTCATTGA
TGAACGTAAGGCTCTCCAATTGATCAAGCAAGGTGGTGGTCAGCGCTTCA
TTACGGATGACGTTAAACGAGCGCGCAGCTTGCTGGGAAAAAGCTCTTCT
GCAGGAACAATTTTGAAGATGAACTCTTTTATAATCTGTTTAAATTTTTT
TGTTTTTCAATTTCATTTTTAAATGAAACCAAGTGAACCATTACGACCGC
ACGAACTTCAGTTAGCTAAAGATACCGCCCGATTGGTCGCTCAGATTATT
GAGAAAATGGGACTAGTTAAAAAGGCTATCATTGTCTCTTTCGACTTCCG
GAAAGTGAAAGTGGTGAAAGCCATCAACCCTAACATCACAGTCGGTACTT
TGTTCTCGCAAAAGTTCGCCGACAAACCAAAAAGCCGATACCTTGAGATG
AAAGAGCTCGGGAATTTAGAACAGTGTGTAAAAGACGGACCCGAAGATAC
GTTGGAATTCTTTAAATTCGTTCTTCAGTCTGGGCTGTTCTTTAAACAAG
CTGGCAGTTCGTCTTTTGATTGTGACATCAAGTTGTACAACAACCCAAAG
TATTTGAATAAAACCCTTCCAACGTTACGCCAGAACTACAGTCGTACGGT
GAGCACAGGTGGTAATACGTACACGTTTGGTAAGAAGAGAAAGATCCCTT
TACTGGAAGACATTTTGAAAGTCACCTCCAAACATGATATTCTTCACTAT
CTAGAGCGGATGACAGGTGTAAGCAAGGTGGTGTACAACAGCACTTACCA
AGAATTACTGGAGCTGAATATCACTGACACCATAGTCAAAGCATCAACAA
TACAATTGCCATCAAGTTGTCCAGACCTTCCCTTCCACGATATTCCAACA
GATCACCTGTTCCACAAGAAAGTGAAACCACTGGTCATCGCACACCGTGG
TTTACCCAAGGAATACCAGGAGAACACGTACGATGGAATCATCGCTTCAC
TGGATTCACACGCTGATGGATTCGAATTAGATATTTACAAAACAAAAGAT
GACCAATTAGTCGTCTTTCATGATGACAACACTATGATGACAATGAAGAT
AATATTTGTTCTTTTTACTTGCTTCATTTATGAAGGCTTTTACACCATTT
ACAGCATGGGAAAAACAGAGGAACAACATCTCATTGATGAACGTAAGGCT
CTCCAATTGATCAAGCAAGGTGGTGGTCAGCGCTTCATTACGGATGACGT
TAAACGAGCGCGCAGCTTGCTGGGAAAAAGCTCTTCTGCAGGAACAATTT
TGAAGATGAACTCTTTTATAATCTGTTTAAATTTTTTTGTTTTTCAATTT
CATTTTTAAATGAAACCAAGTGAACCATTACGACCGCACGAACTTCAGTT
AGCTAAAGATACCGCCCGATTGGTCGCTCAGATTATTGAGAAAATGGGAC
TAGTTAAAAAGGCTATCATTGTCTCTTTCGACTTCCGGAAAGTGAAAGTG
GTGAAAGCCATCAACCCTAACATCACAGTCGGTACTTTGTTCTCGCAAAA
GTTCGCCGACAAACCAAAAAGCCGATACCTTGAGATGAAAGAGCTCGGGA
ATTTAGAACAGTGTGTAAAAGACGGACCCGAAGATACGTTGGAATTCTTT
AAATTCGTTCTTCAGTCTGGGCTGTTCTTTAAACAAGCTGGCAGTTCGTC
TTTTGATTGTGACATCAAGTTGTACAACAACCCAAAGTATTTGAATAAAA
CCCTTCCAACGTTACGCCAGAACTACAGTCGTACGGTGAGCACAGGTGGT
AATACGTACACGTTTGGTAAGAAGAGAAAGATCCCTTTACTGGAAGACAT
TTTGAAAGTCACCTCCAAACATGATATTCTTCACTATCTAGAGCGGATGA
CAGGTGTAAGCAAGGTGGTGTACAACAGCACTTACCAAGAATTACTGGAG
CTGAATATCACTGACACCATAGTCAAAGCATCAACAATACAATTGCCATC
AAGTTGTCCAGACCTTCCCTTCCACGATATTCCAACAGATCACCTGTTCC
ACAAGAAAGTGAAACCACTGGTCATCGCACACCGTGGTTTACCCAAGGAA
TACCAGGAGAACACGTACGATGGAATCATCGCTTCACTGGATTCACACGC
TGATGGATTCGAATTAGATATTTACAAAACAAAAGATGACCAATTAGTCG
TCTTTCATGATGACAACACTATGATGACAATGAAGATAATATTTGTTCTT
TTTACTTGCTTCATTTATGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000636XLOC_000636Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001172-proteinTCONS_00001172-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001172-exon-sc0000007-1575043694:688617..688724TCONS_00001172-exon-sc0000007-1575043694:688617..688724Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1575043694:688187..688431TCONS_00001172-exon-sc0000007-1575043694:688187..688431Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1575043694:686739..686823TCONS_00001172-exon-sc0000007-1575043694:686739..686823Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1575043694:685531..685628TCONS_00001172-exon-sc0000007-1575043694:685531..685628Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1575043694:684268..684703TCONS_00001172-exon-sc0000007-1575043694:684268..684703Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1575043694:683922..684214TCONS_00001172-exon-sc0000007-1575043694:683922..684214Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1510915933:688617..688724TCONS_00001172-exon-sc0000007-1510915933:688617..688724Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1510915933:688187..688431TCONS_00001172-exon-sc0000007-1510915933:688187..688431Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1510915933:686739..686823TCONS_00001172-exon-sc0000007-1510915933:686739..686823Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1510915933:685531..685628TCONS_00001172-exon-sc0000007-1510915933:685531..685628Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1510915933:684268..684703TCONS_00001172-exon-sc0000007-1510915933:684268..684703Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1510915933:683922..684214TCONS_00001172-exon-sc0000007-1510915933:683922..684214Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1491911889:688617..688724TCONS_00001172-exon-sc0000007-1491911889:688617..688724Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1491911889:688187..688431TCONS_00001172-exon-sc0000007-1491911889:688187..688431Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1491911889:686739..686823TCONS_00001172-exon-sc0000007-1491911889:686739..686823Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1491911889:685531..685628TCONS_00001172-exon-sc0000007-1491911889:685531..685628Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1491911889:684268..684703TCONS_00001172-exon-sc0000007-1491911889:684268..684703Clytia hemisphaericaexon
TCONS_00001172-exon-sc0000007-1491911889:683922..684214TCONS_00001172-exon-sc0000007-1491911889:683922..684214Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:683922..688724 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.18376 1.44152 1.4455 0.893177 0.770211 0.680235 1.2958 1.01093 1.33062 1.92873 1.94014 4.07225 19.5285 21.1624 21.9196 22.0491 19.2181 22.0245 14.2498 12.2206 28.6174 24.9068 8.05087 7.77468 4.97779 2.89732 1.15168 3.24484 18.4955 16.4505
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017946PLC-like_Pdiesterase_TIM-brl
IPR030395GP_PDE_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
molecular_function GO:0008081 phosphoric diester hydrolase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001172 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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