TCONS_00001121 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001121
Unique NameTCONS_00001121
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2235

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001121 ID=TCONS_00001121|Name=TCONS_00001121|organism=Clytia hemisphaerica|type=transcript|length=2235bp
ATGATTGCCTTTTTAGTGTTGAACTTTTTTCAGGAAATGGCCTCATTAAA
AAtttgtgtattttttttcttacagTGGTAGCTAATAAGTCTTTTTTAAT
ACAATGAATTGAAACACATGGAGTTGAGAAGCTGTGGTATATCGTCAAGA
ATTAATTTTGATGCTCATGTTTAACTAATACTGAATCTCACGGCTTTGTG
TAGTTTCCATtggattttgttttttgttgttggaaagatatttcaaagAG
GTTTTAGATGAAGTTATGATGATGTTTGAGCGATCAACTAGCCTCAGGCT
TCCACGCAACCAGACCGCAGCCAACAACGTTTTCTACCAATCACAACGCA
AGCAAAGAAAGACATCCTGTGTAACACCTGCGAGGAGGAGAGGCTCCAAG
CTTTGGGTTGATTCGTTCGAATATGACGAGAGTGATGGATGGACTCCTCA
ACAAATCAAGCGACAAGAGGCAATCTACGAATTATATTGCGGAGAAACAG
ACATGGTGGAAGACTTGAAACTGCTACAAGAGgtTTACTTCAATCCGGTG
gccaaattaaaacttttgacGGAAGAAGACCTCGCCTCCATCTTCGGAAA
TATTCAAGTTTTGCTACCGTTACACGAGGATTTGGTGAAACGTTTGGAAG
AAGTACGGACGGAGAACGGAAGCATCGAAGAGATCGGACGAATTTTGACG
GAATGGATTCCCACGTTGCGCCCTTACATTCCGTATTGCGCCAATCAACT
ACAAATGAAAAACATGCTCCTCCACAAGAccaaagaaaataaacactttt
cAGATTTCTTACAAAGATGTTTGGAATCGCCATTCAGCCGTAAACTAGAC
CTTTGGTCTTTCTTAGATTCACCTAGAAGCAAACTGGTGAAATATCCGCT
ACTTATCTCCAACATGCATAAATATACGCCGAAAGAACATCCAGATAATA
TCATCTTATACCAAGCAATTCAAGAATTGGAGGTTATAATAAAAGAGGCA
GATAAAGCCACAGGAAAATCGAAGAGTTCATTCTACAAAGACCGCATGTA
TTTTCTGGACGAAGGAGACCACAGAGAAGCATTATCTCAAGCACAAGTCC
TTCTTTGTCACGGTTCTCTCAAAAACAAGAATGGAGGGaaaatcgaaGCG
TTTCTCTTTGATACAGTATTTCTAATCACGCGGCCCGCTTCACGAAATGG
TATGGAAATGTATCAAGTATTATCTCAGCCTCTACTCACGAATGACATGG
AATATGCCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATTTCGA
TCCAGTCTAACGAAGGGGCCGACAGCTAAATTTGCATTTCGTGTGAATCC
AAAAGAATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGACCAAC
ATGACAAAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAATGCCA
AGCAAAGGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGTGAAA
TGTGAGGGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAATTCGA
GCGAATGGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACACTGAT
GAAAATAGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTTCGGG
CTTGCTGTCGTACCAATGTAaccgattaaattaaaaagacaatttttttt
agaaaaccgttttttagaaaaccgttaaaaaatgttttaaaaacttggaa
aataatttttgataccAATGCATAAAATGgacaatttttttatatgatGA
CACGTACTCGTATGCTTgtatttatgttgttttttttttcgttcagtgTG
TTGTGTGATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGCAAGG
ACTCGCCTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGTTCTA
TTTCGCACTTTATGTCGGCTGTTGAAAGatcataagaaaaatatttgacg
acaACCTATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGTTTGT
TATGATGTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCacctt
ttatttttgtattcgtaatttttgttaatatttttcccGAATTTTTTCAT
TACTGTATTTGTTTAAAATTGTCAGAGAatatttttgtactttttttccT
TCTATTGAAAGAAAATACACTATCCAGAATACAAA
Run BLAST on NCBI

transcript from alignment at sc0000007:439248..453578-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001121 ID=TCONS_00001121|Name=TCONS_00001121|organism=Clytia hemisphaerica|type=transcript|length=14331bp|location=Sequence derived from alignment at sc0000007:439248..453578- (Clytia hemisphaerica)
ATGATTGCCTTTTTAGTGTTGAACTTTTTTCAGGAAATGGCCTCATTAAA AATTTGTGTATTTTTTTTCTTACAGTGGTAGCTAATAAGTCTTTTTTAAT ACAATGAATTGAAACACATGGAGTTGAGAAGCTGTGGTATATCGTCAAGA ATTAATTTTGATGCTCATGTTTAACTAATACTGAATCTCACGGCTTTGTG TAGTTTCCATTGGATTTTGTTTTTTGTTGTTGGAAAGATATTTCAAAGAG GTTTTAGATGAAGTTATGATGATGTTTGAGGTTTGTATATATCTTACACA CTTATCTTTATCTGTCTACTCTTCTTAAATGGTTATATCAAAATTGACCA TATGAAATTCTCCTTCGAAATAGAATTTAAGAGGCAGGCTTGAGACTGGC CATTTATATTCATCGTTGCCGATGAGTATAATCCTTAATTGTAAGTCTTT CCATAAATTCCCTCATTTGCCCTTATCCCTCCCCTTAACTTGTAAAGATT AGATTTTCCTAGAGATTTGGATGTGTGTTCCTGGACATTTTGAGAGTACA AAATGTTTATGCTGAATATTGGCTCTTTATAACTTATAACGTGTTTTGTG TATACCACCTTCATTGTGAATGCCTGTTGTTACATCAAATAAAGTAATAA GTATTAGAAATTGAAAAGAGCTCATATCCCTCCCCTCAAAGTGATATCCC CTCTTGTTATTCCCCAAAAACTGTGCTTTAAAGCCTCCTTGATTTAAAGA AGCTTTGTCGGTGTACTCTAATACGAAGCTTAATGTGGCTAGTTGTTATC TGGGCATTATTGGATTGGTTTTCATTTTCTAAAATAATCCACCAAACTAT CTCTATCCATTGATTACAGTACTAAGATTTCGGAATACGCCAATAATTTC GGAATACGCTCTCCCGTGCTACCGCTTTCTTTGTATAGAAAATGTTGTAA CGCTATGTGACTAGTAATTTTGTCTTCATAGCTAATTAATTATGTTTCGA AATGCAAATTAAACTTCGACCATGAGTAGCCTAATTATTTAGATTGATTG TATGTAATGGTCATATGCTATCTCAAAATAATGCCAAAATAAAAAAGAGG GATTAATTGTCGAGCAAGTCAAGGATTTGATTTTTCCTTCATACATAAAA TGAAATGCGAATTAGATTAGATCTTATCTTGATCAAATTAATTCATTCAT CTTGTTGGTTATGCATTTAGTAAACCCACATTACGTAAGGGACCAAAAAT AACCAGCCAATCATTTTGGTCCAAACCGTTGGATCAGTTCAAGGTTGAAT ATTTTCTGCTTCGTTTTGTATCCTAATAGTCTGTCAAACCTTCGAGGATC GCTGGTCAAGATTCGGTGCTTGCTGCATAATAGCTCGACATCTTTGTTGC TCACATATTGCATAACCATTTAAGAGATTTGTATTTTGATGTCAAAGTCA TTAGACAATGTAAATAGACACAAAGAGCACTTGAGATGTCGCCAAAAATG ACATTTCGACATCTTTTCTGGTTTGAAATTGAAATGCTTCACAAAGTTTG ATCTTGTTAGTCTTCATGTTAAGACTGTTAGCGATTTAATGCTCCTGGCG ACTCTGTCTTATGCCAGTCTGACACTGAGGTCATTTCATATCTACCTCAT CTCAAGTGTATCTCACGTTTAGAACTCGTTCCAGCTCATTATCCCTGTAA TATAGTCAAAATTCGAAATCTCTATGGTCAGAGACTCGCTTTTTTTTAAA GAATGGTGTTTTTTCATTTCATGATGGATATTCTTAACTTTTATGGGAAA ATCATCCTAAAATATTCTTACAGCATTCTTAGGTTAGGATCCTAATTCAG ACTAGATTCAACATTTAGTACATACGTCTCAACCATAAAATGGCATTTTG TGAAAGGAGTGATCCTTAATACTTGGGGTCATTGGCAATTTGTAATTGAA AATGCTCTAAAAATTGCATTCTTAGCTTAAGTAGCCAATTTCCATGATGG TGATATTCTTAGCATTATTCTTAAATTTTTGGCCAATTTCATCATGAGCA TTCTTATAAAGTATATTCTTATAAAAAAGGGTGTATCTTCAATTAATTAC AATCTAATAGTCCACGAATTGAGGTTCCAAATATACTCAAAAGGCTTACT GGCTAATATATATACTTAGGTTGCACCAAGCTTTACCGAATTCTGTGTAG AAAGAAAAATTCTATGTTTACAAAGCGAAAAATGATTGGAAATCCTGATA ATAGCGAATCAAAAATTAAATTCGTCTATTTCAAGAAAAACTGAACAATT TTATCGAATTTGTGTTTCAGATAATTAGCGAGGTGATTAGTAATTTCCTA ATGATCCCATGGGTCAATACAAACTGTTAAACTAATGATTTATGTATTGA TCAAACACCCGGTTCGATCGAAATGACAAAACATCTTGTTCTCGATCTTT TGTATCGCCTGTGTCCAAAGCAATTCCCTTCCAACTGGCTTAACCAGTGT CACAATGATTAAGAACCAAACACATAGATTGTTTTGACACTATTCTTTGT GGACAAGCAAGCGCTTTAGAATCGGTGACATGGACGTGTTGTATCCTTAT TCCTTACTCTATGCAGCACCGTATCCAAACTTTCAGAAGCGAACTTTACA ATGGATGGCGGTAAGCAANATGTATTGATCAAACACCCGGTTCGATCGAA ATGACAAAACATCTTGTTCTCGATCTTTTGTATCGCCTGTGTCCAAAGCA ATTCCCTTCCAACTGGCTTAACCAGTGTCACAATGATTAAGAAACAAACA CTTAGATTGTTTTGACACTATTCTTGGTGGACAAGCAAGCGCTTTAGAAT CGGTGACATGGACGTGTTGTATCCATATTCCTTACTCTATGCAGCACCTT ATCCAAACTTTCAGAAGCGAACTTTACAATGGATGGCGGTAAGCAAAGGG CATTTTAGAAGGTTTTATTTTCAAAGCATCTATATGTCTCATAGTAAAAA AGGGCCCGATTTTGAATACCTTATCGGGGAAAAAATGTCGGGGAAAGTGA CGAAAATTTTGAGGGGGTGACGAAACTTTTCCCCGATATTTTATCACCCG ACCAAAGCTTTTACTCGATTTTTTTCCCCCAACCAAAATTCAAATCAACT TTTGTACGCCTTTATTAACCGAAATTAATGCTTTAAACGTCGAATTAGAA GACCTATTTTCGAGCTAGTGAAGGAAACCATTTCATTTGGACAATTTAGT CGGGTGGAAGTGACGAAAATGCCTCTAGGTGACGAAATTTTTCCCCGACG AAAAAAAAACCCGACAAAATAAAACTCCGACATTTTTTCCCTGATAAGAT AATGCTCGTAAAAAGTATTCCCAAATTTAGGGGTACCTGATATGTTTGGG GATACCTGATATGTTTGGGGATACCTGTAATTTCATAATTAGGGACGGGG CCTGTTATTTTTTTATGAAATATTTTTCTTGACTGACCCTATTTCTCATT TTTCAAGACTGTTTTTATAACCTAGTTTGGTCCAGTTTGGTCAGCTATAT TTTTCGTAAAAAAATATATTTTTCCACCTTCTCATTAATGCTGATAAAGT GGCAACAAGAGTGCTAGACAATTGGTTTGGTTTAATACTTCAGTGATGTT AATTTAAAATTTTAACTTTGATCACGATATTTAAACATGGGTCCTTCACT ATTTTGCCAAGAAAAAGTTAGCCAACCTAAACATTAAGGGCAATGTCAAT TTATCAGAATATTCAGTACTCAAGCTAGGGCAGATATTAAATGCTGCAAA TAATCATGAACATTTGCATGGTTGTGTGAAATTCTTGCCTGATTGATGAC GTGGGCCTTCAACATGCCCCCATGCCAACATGATTTTGGGATTGATCCAA AAACTGGTCCGAGCTTGCTCTGAACATGCGCTTGGGTCGTCTTAAAACCG GGGGGATTTCATGAATGGCAAAAGAGCACAAAAATCCTTTATTATTATTT CTAATGTTTTATAATAAAAAATGGGGTAACTCAAAGTCTGGGGGCTACTA AAGAATTCTAAAAGATTTTGGGGGTACCAAAATATTAGGGATAACTAAAT TTTTTGGGGGGTACCTGAACCCTTGAAGACCCTATGCCAGGCTCTAAATA GATGGATAAAACTCACCTTAAGAAACAGGAAACTTCCAGCCATTCAATAA ACTATGAACCAGCTTCTAATAGAGATCAGTCTAACTGAAGAAAATGAAGA GAGAAAATACCTTAAGAAGGTCTGGCATTCCAGGTTTGGATTCATTGAAT TCATACCACTGTAATGCAAACTATCCAGGACGCCATGAACAAAATAACTG TTATTAGATAACGATAACAATCGTTTATTTTCTTTTTTGCTGTAGCGATC AACTAGCCTCAGGCTTCCACGCAACCAGACCGCAGCCAACAACGTTTTCT ACCAATCACAACGCAAGCAAAGAAAGACATCCTGTGTAACACCTGCGAGG AGGAGAGGCTCCAAGGTATGTAGTCCTGGTATTGTTATTGTGTTCCTGGT TTCTCAACATTCTAGTAAACTAAAGACAATGTACTATTTAAGGCACAGAA ATGCTTGACGAAAATATAGCTAACTTCGAAACCTGGGGCGGAATCGTTCA ATATTTGATTATTCTTATTATATTACGAACATAAATTATTAGGGTCTCAA AATTAGACCCTTACGGTTGAGAAAATCTAGCTAAATTTGAGCAGATTTCA GCAAATTGGTGCAAAAAATTTGAACATTTTGTCCATTTTTGTACGGTGGT GAAATGACCTATTTTGCTTGAACCTTAACAAGTATTTTTATTATATGGTC CCTTGGGATTTCAAACCCAGTTTTTGCCTACTTGGCAAAGCTGGGGAAAA TTTTCTAGACTCTTATAAACAGTTATAAAGTCAACTTTTGAAGATCCTCA TTGACAAAAACTAATTGTACCATCTGATAGAGCTTGGATAGCAGATCTCC AAAAAGGAGATTTCATTTGTTTCATTTTGTTTCGACTAAGTCCCCCGAAA ATGGATGATACGTCTCTTCAGAAATGCAAATTTTTATGTCAGTATTTTTG AGAAAACTTTGACGAAAAAAATTACTTTCAGCAGACGAATCTCGAAAAGT ACTTTCGATTATAGGTATAGTTTAAAGGGTTTCCATGGTTAGATCTTGAG ATATTTGAGTTTGAAATTTTGCTAATTCAGCGTTTTTCCAGGTTTTTCAG CATTTTTTTTGCATAGTAATTTTCCTCTTTTGACAAGAAAACTGTCATTT CTGAGATGAAATAGGAGAGAGCTGTCATGGTCTGAGGAGCCCTCCTTGTC TTTCAGTACCCACCCCCTAAAATCGGCTCCTGTAACCATGTTACTGGTCT TATCCCCGTTTGTGTTGACTTAGCTCTTGGTTTTTATAGAATAGTCTGAT CAACCATTTTATTCTCCCATTTTAGCTTTGGGTTGATTCGTTCGAATATG ACGAGAGTGATGGATGGACTCCTCAACAAATCAAGCGACAAGAGGTATAT ATTGTTTGCTTTCTTTATATGTTGATGCTTATTTGCTTCTTTAAAATTTG GAAGGGGAGCTATTCCTCGCGATCCATTATTTAAACTGCACCAATCAGGA TCAACTAAAAATTTCTTGGCACAACTAAACGTTACTCGCAAAACCACACG AACTTTCGTGCAAAATAGTGTATTGTTGCCATTACATCTGAGGAGATGTG AAAATTAGAGGCTTAGCACAAATGGGTACATTTTAAACGAATGTGGCAAT AAATTGCACTTAATCGTGGTGCCCCTTGGCTAGACAATTCTCAAAATTTT CAAAATTAAATCGTAATATTCGACATTTCCACAAATTTTATTCGTGAATC CCAAAGGAATAACCCGAAGTATTGTGGTAAGGTGCAGCCTTCGGCTGATA ATTTTGATGATTAATTTACAAATATAAAGGAATTCATCTAATAATTACAA AACCTTCACTTATAAAACCTAACTCTTCATTGAAGATTGAAAACTCAGCC TTCAACCGCTTCAGAGTTCGATCGGAAAATATTTGAACTCGATATCCTGT TCTTTTGCAGGCAATCTACGAATTATATTGCGGAGAAACAGACATGGTGG AAGACTTGAAACTGCTACAAGAGGTATAGGTTTTAAATAAATGATTTCTC TTCCCAAAAAGAATTTATACGAGAAAATATGCTTCTCTCGTAGAAAGTAT CGGACAAATTTCAACAAATAAATGTTTTAGTTGTCCCTTGAAACTACGGG ATAACACCTTTTTATTCAAGCTGATTCTAGCGTCTGAAACAATTAGTGTC TTTGAATAACTGATGTTGGGATATCGTATTGTGTTATGAACGAAGTAAAG GTCGCATTCCGAATTAGCAGGGATTGTTTCTGATGACAGTTCATCTTGTT CGGTGAAGCTGAAAAACTGGAATACGGGAGTCTATAAGATTTTCTTCTTC TTAAAATAGCATGAATAGAATGGAATTTCCGTAAAAAAGATCATTTGATT AAATTCGGATGATTCAATTTAAAACTCGCCATTATTTCGCTAGTCTTGGA AATTCTTAAGATTTTGATTCTTTCTAAGTCATTGATGTTCTTGGTGATCT CGTACCTTCTTGTACCCTTCCTGGTGTGAACAGGGCCTTAATAGATTCAC GGAAACTTTTCATCAGAGCTATGAAGATGTATGGGTTGACAGCACTGTTC GAAACAGACAACAAATATCGTGTGTGGTATAAATCGTACTTTAACTTGCA ACTACATTGCTTGCAGTAATACATAACGTTCAAGAAAGCGAGTCCCGGAA TATAAGAGATCATAAACACAGCTAGAATAATGAAAAATACGCGCGTTACT CTCTTTTCCTTGATGTAACGCTGAGCGATTGTTTTACGGTTTGCTGTCAA GGAATCTTCCAAGCGCTTCTTGAACTCTTCTTCGTTGCTTTTCATGAAGC GATGGACTCCGAAATACACAAAGGCTATAACAAAAAATCCAATCGCGATT GCACCATAATAAAAACCAGCAAAGCCATATCTACGGTTGCCGATGAACGT TACCAAGCAACCGACACCGATGGACAAGACCCAAATAATGATGGATATGA CAATACAACGAACCCAGGATAGCTTGATTCGATATTTCAATGGATGTGTG ATTCCCACATAACGATCAATTGCTAACGCGCATGTGCTGAGAATCACACT AGCCGCTGATGTTATGGTAGTGCTTTCTTCCAACGGGCTAAAAGTGATAT TCAAACCTTTGAGGGAAGTGTACATGTAGTAAGCGGTTAGAGGCATGGGC ACGGCACCTGCGATGAAGTCACATACTGATAGGTTGACCAAGAAATAATT AAAGGGCGTGTGAAGCTTTTTCAAAGGATCGCATACCACTACAAGAATGA TGAGAAAGTTGCCAACGATTGCCAGCACTGATAATGCGATGAATGAAATG AAAAGTGCGATCGCTGCGTCTGAACCTGTGTCTGCATTTGAACAGTCGCT TGTCATGGTATGGTATACTTCAGAGGTTTTTAGCGAACTGGAAGAAATTC TCACTTTCTTCTCTTGTGATATGCATATTTTTTTAACTTTCTTAAAATCG TGTCATGGTATGGGCTGTTTGTGTTTTTTCAGATCTCATGATGCTAGTCA GTGTTTATTTAAGGATTTTTTGACAGCATGATGTAACTTGACAACAAGCG TGTCCTATGAAGAGGCAATTCTGAATGAAAACCGCATTCAGCGAAATTCC TGGATATCTCGAAGTTAGGAGAAGCCACTCGGTTGTTTGGGCGTATGGTT GACAGGACCTGACAATTGTGGCAAACCTCTTGTCAGAAAAATGAAATATC ATTGAAACGGTGATTTACCGAACAATGAATGATGAGATTTTTCTTTCTAT GAAAGAAAACCCTAACGATCTGCATCGTGCAATTAAAAAACTGTCTGGTT TAGTCCACCACAAGTTATTATTTAAAGGGGTACTTAATTTAGATGACGTC ATTTGATCATTTTATATCTTGTAAACATTTTAATATTTTAATTCATGTAA CGTTTTCCCCGGCGTCCCTGGTGTTTAATTTTATCGGCAGTGAGAGGGAG GGTGGTGCTAGGTTTTAACACTTTGATATGACGAGTACTTTCGTGTTCTA GGTTTTTCGGGTTTATTCCATTCAAATATAACGATACAATATTTTTTTGT TTAGGTTTACTTCAATCCGGTGGCCAAATTAAAACTTTTGACGGAAGAAG ACCTCGCCTCCATCTTCGGAAATATTCAAGTTTTGCTACCGTTACACGAG GGTAAGACTCTTTTAATTTTTCAGCTTACAAACTCTTTAAAACGTAATTT TGCTTTCGCAGGTTGCTCGAGGTCGTATTTGAGGAGTTTTACCAACATAG CGGTCTCTACCACGTGATTGCATGTCGGATCTTTGTGAGCAGTTTGCCTC CATTCTATGATTATTCATCTGTTGAATTCTTCAACATCATTTGCAGTTCT TTTCATTGCTTCTTTTCGACTTCTTTTTGTCGGTGACAATGATGTCAAAG TGATCAAGTCTTGTTGTATGCTTTACTTTCATTCAAACTTGCTCCGTAGT CACAGAGCTTTCCAATGAATCGATTACGTTTTTGTTTTTGCTGTGTCATC GTCAAAATAATCAAACAGAGAAACCAAAAAGAATCTGAAAAAGAGTCTTT CCCACCGCGTCCGCAAAGATGAACAGTTTTGGTAAACTGATTCCATTTTA AGAACACTAAATAGTTCAAACTTAATGTTAATATATCAAGACATTTACTT TTGTACTGACACACTGAGTCTATGTATGCGTTCCCCAAATAATTGGAATG TTCAAACGTGTTCGCCCTTCGTCTCTGTCTTGTTCTATAGAAATAGATTC TCTTGTTAATCGCCAGCTTGTAACAGTGAGGCTTTTTGTAGCCTGTAATA CGATACACTTATGTCACGCAGTCGTGGTGGTGAGCCGACTGAAAAAAGAA CTTTCTCAATCTTTACTCCAAATGTTTTAAGCTTAATAGGGTGAAATATG TAAACATGTAACGAGTGACGAGTTCATCTCAACCCGAGAGCTTTTTCTTT TCGCTCGCTATGGGTCGTTTATTCATCATTCGCTGTCCCTCTTTTCGGTT TTCTTTCAATAATATTCTCGCATACATAAGCTCTTATGAAAGTGTCAAAA ATAACTTTATCAGATTCCACACATATCACCACCACTCAGCATTTCAACCG CGGTTCCTTGACCACTATCATTCCTATCTTTTCATCAAAATATCATGTTT ATTTATTTGGGTGTTTACCATTTTGATCACAAAGATCCATGCATTTTTCT CTAGTGTATCATGAATTAAACGTATCATAAAGTCTCTCTCTTTGAAATGA GTCATTTTTGCTGCTTTTTGACGAAATGTTTTCATAATATGGTCAAAGAA AACAAGAAATGCAAAACCAACACCTTGCACTCACCGCCGTCACTTTCAAA GTCAACAAATACTCACAAGTCACAACGACGACCCTTTGACGTCATCGTTC AGCCTCAATGCCAAACATAGCAACAAATATCCAAACTCTATCTAATGCAA GCATCATCTTTTGGCATTTGCCCAAATATCTCTATTCGTCATACTCCAAT TTAGATACTTGATAAGTTTTTTTGGATAAAAATCTTTATAATTCTACCTA ACATGTCTTTCCTTTCTTATCCACTGTTATTGACAATTTCGTCAAGAATT CTTCACTCTGTATTGTTATAGATTTGGTGAAACGTTTGGAAGAAGTACGG ACGGAGAACGGAAGCATCGAAGAGATCGGACGAATTTTGACGGAATGGAT TCCCACGTTGCGCCCTTACATTCCGTATTGCGCCAATCAACTACAAATGA AAAACATGCTCCTCCACAAGACCAAAGAAAATAAACACTTTTCAGATTTC TTACAAGTAAGCATGACCTTTTTTCCTTCATTTTTCTTCTCCCGTTTTTT TTCTTCTTTCTTTTCTCCCANCTTTTTCCTTCATTTTTTCTTCTCCCGTT TTTTTTCTTCTTTCTTTTCTCCCAAAACTTTGACGACGACCTCAAATTGT GTATTTATTTCAAAACCTGACCTTTTACGACATCAAGTATGAAAAAACGT GCGGTTGATTCGTATTGTATAAGGTGTGGTTATTCAATAGACGTGGTTTT GAAGGATAGCAAATAGAGATGGTTAGTGATAAGATAAGGGATAGGTAATC ATATCTTGGTAGACCCTGATTAACAAATCATTCGTTGAAAATGTGATGTT AAGCGCCAACGGATTATCGTACAATTGAATCAACAAGCCAACGTCTCTTT TGATAATCCTATCTTTCCAACTGAATAAGCTTTATCAAAATGACTATTAG ACTCATCTATGCTCCTATCATTACCCTAATCACCAGTTTTTCCTTCCCTT TCTTCATAGAGATGTTTGGAATCGCCATTCAGCCGTAAACTAGACCTTTG GTCTTTCTTAGGTAATCATTATATTACTCAAACCCACCTTTCGCCCAATC ATCAAACAAATTTACACGCTTTTTTTTTATAAGAATGGTGTTTTTTCATT TCATCATGGATATTCTTAACTTTTTGACGAAAATCATCCAAAAATATTCT TACGGTATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNAATTCCATGATGGTGATATTCTTACCATATTCTTAATTTT TTGGCCATTTTCATCATGGACATTCTTATAAAGTGTATTCTTATAAAAAA AAAAGCGTGTACTGTCTTTGCACTAGCCTTTTCATTGTAATTTGCTAAGT ACTCATTTGACCTGTCTTCCTTTGCTTGACTTTCACGTTTCATAATCTCT CTTCTCTCCTTTGTATTCATCAGATTCACCTAGAAGCAAACTGGTGAAAT ATCCGCTACTTATCTCCAACATGCATAAATATGTAAGCTTTTTGTCACTT TTTCTTTCTTTACGCTTATGGGAGATGACGCATCGTAAAATGACATGTAT ATGTCTGATGTGTTTAGTGCCCAAGTGTCAATCCTCTTAACAATGCAAAA AGTGCTTTTCATCATTACTTTTTAAACCTTCTTTTGTTTTGGTTTTGTTT GTAGACGCCGAAAGAACATCCAGATAATATCATCTTATACCAAGCAGTAA GTGATGTTTTGTCTAACAAATCATACATTTTACTACCCTGTCTCCCCTCT GATAACAGCTGTTTATTTGTCCCTTTTTTGAAGCTGTAAAATTGATGTGT TTTTTGGTGATGTATCCTTTCACTATCACATCATCAGTCTGTCATAGTGT AAATATGATGACATGTGGAGTCCTTTATTGATAATAAACGGGAATCTCAG GGGTTTCCACCGATTGAGCGTTTTCTCTACATTTCCTTCTTGTTTTCTTT GCGCTGACTAAATTGGAAAAATAACGGCTCATAGTTTTGATATTCTAAAT CTCTGACAAGAATCTCAATTATGTTGAAGTTCTATAAATAAGTTAAGACA CCCCTTCTTCTCTTATATTTGGTTCGATTAAGGAGATTATTTCAAATTTT TTTCTTCGTCAGATTCAAGAATTGGAGGTTATAATAAAAGAGGCAGATAA AGCCACAGGAAAATCGAAGGTAAAGTTCCTCTTTATCTCTCACTGACCCT TGTAAACAACTCAAACTACTTGAACCATGTGATTAAAACTCTCCACCGTT TCTTACTTTTAGAGTTCATTCTACAAAGACCGCATGTATTTTCTGGACGA AGGAGACCACAGAGAAGCATTATCTCAAGCACAAGTCCTTCTTTGTCACG GTTCTCTCAAAAACAAGAATGGAGGGGTGAGTGGTTAATCCTCGTCCCTG ACAACCTCTCTGTAATAAGTCAGATTTTTCAATCGATCTCTTGCTGTCCA TGATGACTTATCACGCGTTATCAATTAGCTAATTAAGATATATCGAACAC AAAATGAGAGCTAATTCTGAACCAATATATTTCTTTTTTCAGAAAATCGA AGCGTTTCTCTTTGATACAGTATTTCTAATCACGCGGCCCGCTTCACGAA ATGGTATGGAAATGTATCAAGTATTATCTCAGGTAATTTAGCATTCTCTT TACACGCTTGATTTGCGATGTATTAGCACGAGATGATTGAATGGCGCCAT CGCTTGTTTACTAGCCTGCACCAGTCCTTTATAAACATGTTTAGCCCCCA AACTGTGCATTCTTTACAAGAGAATTTGATTGTAATGAGAATGATTGAGA AGCATCTCTTTGAATGAACTGCTTGTACGCCAGTGAGAGATAAAAATCAC CCATCTTTCTTTCACATTCTTGATGGTCTTTATGAAGAGAAATAAAGGTT ATAATACTCTTCGAAGTTCATTCATGATTAACATTTATTTTCGTTGAAAA GCTCACCCTTAATCTTTTTGAGCTCGGTAAGAAAGAAGTTGATTCGACTG AAAATGTTATTCATTTCTAAGACGTCTTAGCTTGCTCTATACTAGCATCA TTGTCCAGTGGCACGGTCTATTCAATCAAAATTCAAACCCTCTTTTGAGA AGCTAATAATTTGTTAAGCTTGTTAAATCTCTCTATGATGCCTTCACCCA AAATAATTCAAGCTTGTAATTTTGTACACAATCAAATTTGATGAAATTAC TTGCTTTAAAAACTCAATTAACAACTCCACTTAATTTAACAAAATTTTGA GCAGCTGGCTCGAAAACCTTTTTGTCAATTATATCCTAAATGCATTCCTT TTTTCTTTGATCACTTTAGCCTCTACTCACGAATGACATGGAATATGCCA ATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATTTCGATCCAGTCTA ACGAAGGGGCCGACAGGTAAGAAATGAAGTGCGGTTTTTGATGCCTTCTA CCGGAAACTGTAACGGTCTTCTCAATATTTCCGGCGTATTTTTGTATTTT TGTTGTTTGATTGACATTCGAAAACAAACGTCGTTACAGTGTTGAAAGTT GAGGAGAAAATAATTATGAGATTAAAGTCGATCATTAATTCCTTGCAATC TTCTACTCTAAGCATCGATTTAACGAAGGAAAAGGGGATTGATCTTGTGA AAGATAATATATTTGCACTGCACTGATGTTGTTGGAAGGTTCAATCATTA TTGACTCTTACTCTGTTTCAGCTAAATTTGCATTTCGTGTGAATCCAAAA GAATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGACCAACATGA CAAAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAATGCCAAGCA AAGGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGTGAAATGTG AGGGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAATTCGAGCGA ATGGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACACTGATGAAA ATAGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTTCGGGCTTG CTGTCGTACCAATGTAACCGATTAAATTAAAAAGACAATTTTTTTTAGAA AACCGTTTTTTAGAAAACCGTTAAAAAATGTTTTAAAAACTTGGAAAATA ATTTTTGATACCAATGCATAAAATGGACAATTTTTTTATATGATGACACG TACTCGTATGCTTGTATTTATGTTGTTTTTTTTTTCGTTCAGTGTGTTGT GTGATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGCAAGGACTC GCCTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGTTCTATTTC GCACTTTATGTCGGCTGTTGAAAGATCATAAGAAAAATATTTGACGACAA CCTATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGTTTGTTATG ATGTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCACCTTTTAT TTTTGTATTCGTAATTTTTGTTAATATTTTTCCCGAATTTTTTCATTACT GTATTTGTTTAAAATTGTCAGAGAATATTTTTGTACTTTTTTTCCTTCTA TTGAAAGAAAATACACTATCCAGAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000629XLOC_000629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001121-exon-sc0000007-1575043694:453299..453578TCONS_00001121-exon-sc0000007-1575043694:453299..453578Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:449064..449183TCONS_00001121-exon-sc0000007-1575043694:449064..449183Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:448035..448103TCONS_00001121-exon-sc0000007-1575043694:448035..448103Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:447406..447468TCONS_00001121-exon-sc0000007-1575043694:447406..447468Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:445228..445324TCONS_00001121-exon-sc0000007-1575043694:445228..445324Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:443573..443757TCONS_00001121-exon-sc0000007-1575043694:443573..443757Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:443018..443069TCONS_00001121-exon-sc0000007-1575043694:443018..443069Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:442397..442455TCONS_00001121-exon-sc0000007-1575043694:442397..442455Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:442183..442224TCONS_00001121-exon-sc0000007-1575043694:442183..442224Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:441710..441766TCONS_00001121-exon-sc0000007-1575043694:441710..441766Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:441503..441616TCONS_00001121-exon-sc0000007-1575043694:441503..441616Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:441247..441336TCONS_00001121-exon-sc0000007-1575043694:441247..441336Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:440463..440559TCONS_00001121-exon-sc0000007-1575043694:440463..440559Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1575043694:439248..440157TCONS_00001121-exon-sc0000007-1575043694:439248..440157Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:453299..453578TCONS_00001121-exon-sc0000007-1510915933:453299..453578Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:449064..449183TCONS_00001121-exon-sc0000007-1510915933:449064..449183Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:448035..448103TCONS_00001121-exon-sc0000007-1510915933:448035..448103Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:447406..447468TCONS_00001121-exon-sc0000007-1510915933:447406..447468Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:445228..445324TCONS_00001121-exon-sc0000007-1510915933:445228..445324Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:443573..443757TCONS_00001121-exon-sc0000007-1510915933:443573..443757Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:443018..443069TCONS_00001121-exon-sc0000007-1510915933:443018..443069Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:442397..442455TCONS_00001121-exon-sc0000007-1510915933:442397..442455Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:442183..442224TCONS_00001121-exon-sc0000007-1510915933:442183..442224Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:441710..441766TCONS_00001121-exon-sc0000007-1510915933:441710..441766Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:441503..441616TCONS_00001121-exon-sc0000007-1510915933:441503..441616Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:441247..441336TCONS_00001121-exon-sc0000007-1510915933:441247..441336Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:440463..440559TCONS_00001121-exon-sc0000007-1510915933:440463..440559Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1510915933:439248..440157TCONS_00001121-exon-sc0000007-1510915933:439248..440157Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:453299..453578TCONS_00001121-exon-sc0000007-1491911889:453299..453578Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:449064..449183TCONS_00001121-exon-sc0000007-1491911889:449064..449183Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:448035..448103TCONS_00001121-exon-sc0000007-1491911889:448035..448103Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:447406..447468TCONS_00001121-exon-sc0000007-1491911889:447406..447468Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:445228..445324TCONS_00001121-exon-sc0000007-1491911889:445228..445324Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:443573..443757TCONS_00001121-exon-sc0000007-1491911889:443573..443757Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:443018..443069TCONS_00001121-exon-sc0000007-1491911889:443018..443069Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:442397..442455TCONS_00001121-exon-sc0000007-1491911889:442397..442455Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:442183..442224TCONS_00001121-exon-sc0000007-1491911889:442183..442224Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:441710..441766TCONS_00001121-exon-sc0000007-1491911889:441710..441766Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:441503..441616TCONS_00001121-exon-sc0000007-1491911889:441503..441616Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:441247..441336TCONS_00001121-exon-sc0000007-1491911889:441247..441336Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:440463..440559TCONS_00001121-exon-sc0000007-1491911889:440463..440559Clytia hemisphaericaexon
TCONS_00001121-exon-sc0000007-1491911889:439248..440157TCONS_00001121-exon-sc0000007-1491911889:439248..440157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:439248..453578 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.94194 4.06696 1.005 0.626674 45.8094 37.1144 25.4879 23.6122 16.6151 21.3252 11.0947 11.9767 11.635 8.96231 4.92709 5.79612 10.0418 8.88718 8.33978 11.8422 9.00826 7.75916 14.1502 8.81823 2.93274 9.02076 2.03257 1.25866 5.94648 7.09073
Blast
BLAST of TCONS_00001121 vs. Swiss-Prot (Human)
Match: ARHG8 (Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.584e-105
Identity = 162/376 (43.09%), Postives = 245/376 (65.16%), Query Frame = 2
Query:  341 SQRKQRKTSCVTPARRRGSKLWVDSFEYDESDGWTPQQIKRQEAIYELYCGETDMVEDLKLLQEVYFNPVAKLKLLTEEDLASIFGNIQVLLPLHEDLVKRLEEVRTENGSIEEIGRILTEWIPTLRPYIPYCANQLQMKNMLLHKTKENKHFSDFLQRCLESPFSRKLDLWSFLDSPRSKLVKYPLLISNMHKYTPKEHPDNIILYQAIQELEVIIKEADKATGKSKSSFYKDRMYFLDEGDHREALSQAQVLLCHGSLKNKNGGKIEAFLFDTVFLITRPASRNGMEMYQVLSQPLLTNDMEYANVSDGELRLGGSFRSSLTKGPTAKFAFRVNPKELTRGKSIILQANDQHDKKQWLNAL-SKVASMPSKGDP 1465
            +Q+   +++  TPA+RR S LW +  +    +  T ++I+RQEAIYE+  GE D++EDLKL ++ Y +P+ KL +++EE+L  IFG++   +PLHEDL+ R+ E    +G++E+IG IL  W+P L  Y  YC+NQL  K  LL + K++    DFLQRCLESPFSRKLDLWSFLD PRS+LVKYPLL+  + K+TPKEHPD  +L  AI  ++ ++ + +   G+S+  +Y D++ +LDE      +  ++VLLCHG L++K+G K+  FLF  + ++TRP +RN    YQV  QP+   ++   ++ DG++R+GGSFR + +    AK  FR+   + +  +S  LQAND   K+QW N + + +A   S G P
Sbjct:  135 AQKFSSRSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAK-ALLDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPIPVQELVLEDLQDGDVRMGGSFRGAFSNSEKAKNIFRIRFHDPSPAQSHTLQANDVFHKQQWFNCIRAAIAPFQSAGSP 509          
The following BLAST results are available for this feature:
BLAST of TCONS_00001121 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHG82.584e-10543.09Neuroepithelial cell-transforming gene 1 protein O... [more]
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