TCONS_00001120 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001120
Unique NameTCONS_00001120
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2839

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001120 ID=TCONS_00001120|Name=TCONS_00001120|organism=Clytia hemisphaerica|type=transcript|length=2839bp
AATAAGTCTTTTTTAATACAATGAATTGAAACACATGGAGTTGAGAAGCT
GTGGTATATCGTCAAGAATTAATTTTGATGCTCATGTTTAACTAATACTG
AATCTCACGGCTTTGTGTAGTTTCCATtggattttgttttttgttgttgg
aaagatatttcaaagAGGTTTTAGATGAAGTTATGATGATGTTTGAGCGA
TCAACTAGCCTCAGGCTTCCACGCAACCAGACCGCAGCCAACAACGTTTT
CTACCAATCACAACGCAAGCAAAGAAAGACATCCTGTGTAACACCTGCGA
GGAGGAGAGGCTCCAAGCTTTGGGTTGATTCGTTCGAATATGACGAGAGT
GATGGATGGACTCCTCAACAAATCAAGCGACAAGAGGCAATCTACGAATT
ATATTGCGGAGAAACAGACATGGTGGAAGACTTGAAACTGCTACAAGAGg
tTTACTTCAATCCGGTGgccaaattaaaacttttgacGGAAGAAGACCTC
GCCTCCATCTTCGGAAATATTCAAGTTTTGCTACCGTTACACGAGGATTT
GGTGAAACGTTTGGAAGAAGTACGGACGGAGAACGGAAGCATCGAAGAGA
TCGGACGAATTTTGACGGAATGGATTCCCACGTTGCGCCCTTACATTCCG
TATTGCGCCAATCAACTACAAATGAAAAACATGCTCCTCCACAAGAccaa
agaaaataaacacttttcAGATTTCTTACAAAGATGTTTGGAATCGCCAT
TCAGCCGTAAACTAGACCTTTGGTCTTTCTTAGATTCACCTAGAAGCAAA
CTGGTGAAATATCCGCTACTTATCTCCAACATGCATAAATATACGCCGAA
AGAACATCCAGATAATATCATCTTATACCAAGCAATTCAAGAATTGGAGG
TTATAATAAAAGAGGCAGATAAAGCCACAGGAAAATCGAAGAGTTCATTC
TACAAAGACCGCATGTATTTTCTGGACGAAGGAGACCACAGAGAAGCATT
ATCTCAAGCACAAGTCCTTCTTTGTCACGGTTCTCTCAAAAACAAGAATG
GAGGGaaaatcgaaGCGTTTCTCTTTGATACAGTATTTCTAATCACGCGG
CCCGCTTCACGAAATGGTATGGAAATGTATCAAGTATTATCTCAGGTAAT
TTAGCATTCTCTTTACACGCTTGATTTGCGATGTATTAGCACGAGATGAT
TGAATGGCGCCATCGCTTGTTTACTAGCCTGCACCAGTCCTTTATAAACA
TGTTTAGCCCCCAAACTGTGCATTCTTTACAAGAGAATTTGATTGTAATG
AGAATGATTGAGAAGCATCTCTTTGAATGAACTGCTTGTACGCCAGTGAG
AGATAAAAATCACCCATCTTTCTTTCACATTCTTGATGGTCTTTATGAAG
AGAAATAAAGGTTATAATACTCTTCGAAGTTCATTCATGATTAACATTTA
TTTTCGTTGAAAAGCTCACCCTTAATCTTTTTGAGCTCGGTAAGAAAGAA
GTTGATTCGACTGAAAATGTTATTCATTTCTAAGACGTCTTAGCTTGCTC
TATACTAGCATCATTGTCCAGTGGCACGGTCTattcaatcaaaattcaaa
ccCTCTTTTGAGAAGCTAATAATTTGTTAAGCTTGTTAAATCTCTCTATG
ATGCCTTCACCCAAAATAATTCAAGCTTGTAATTTTGTAcacaatcaaat
ttgatgaaattacTTGCTTTAAAAACTCAATTAACAACTCCACttaattt
aacaaaattttgaGCAGCTGGCTCGAAAACCTTTTTGTCAATTATATCCT
AAATGCATTCCTTTTTTCTTTGATCACTTTAGCCTCTACTCACGAATGAC
ATGGAATATGCCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATT
TCGATCCAGTCTAACGAAGGGGCCGACAGCTAAATTTGCATTTCGTGTGA
ATCCAAAAGAATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGAC
CAACATGACAAAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAAT
GCCAAGCAAAGGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGT
GAAATGTGAGGGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAAT
TCGAGCGAATGGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACAC
TGATGAAAATAGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTT
CGGGCTTGCTGTCGTACCAATGTAaccgattaaattaaaaagacaatttt
ttttagaaaaccgttttttagaaaaccgttaaaaaatgttttaaaaactt
ggaaaataatttttgataccAATGCATAAAATGgacaatttttttatatg
atGACACGTACTCGTATGCTTgtatttatgttgttttttttttcgttcag
tgTGTTGTGTGATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGC
AAGGACTCGCCTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGT
TCTATTTCGCACTTTATGTCGGCTGTTGAAAGatcataagaaaaatattt
gacgacaACCTATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGT
TTGTTATGATGTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCa
ccttttatttttgtattcgtaatttttgttaatatttttcccGAATTTTT
TCATTACTGTATTTGTTTAAAATTGTCAGAGAatatttttgtactttttt
tccTTCTATTGAAAGAAAATACACTATCCAGAATACAAA
Run BLAST on NCBI

transcript from alignment at sc0000007:439248..453495-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001120 ID=TCONS_00001120|Name=TCONS_00001120|organism=Clytia hemisphaerica|type=transcript|length=14248bp|location=Sequence derived from alignment at sc0000007:439248..453495- (Clytia hemisphaerica)
AATAAGTCTTTTTTAATACAATGAATTGAAACACATGGAGTTGAGAAGCT GTGGTATATCGTCAAGAATTAATTTTGATGCTCATGTTTAACTAATACTG AATCTCACGGCTTTGTGTAGTTTCCATTGGATTTTGTTTTTTGTTGTTGG AAAGATATTTCAAAGAGGTTTTAGATGAAGTTATGATGATGTTTGAGGTT TGTATATATCTTACACACTTATCTTTATCTGTCTACTCTTCTTAAATGGT TATATCAAAATTGACCATATGAAATTCTCCTTCGAAATAGAATTTAAGAG GCAGGCTTGAGACTGGCCATTTATATTCATCGTTGCCGATGAGTATAATC CTTAATTGTAAGTCTTTCCATAAATTCCCTCATTTGCCCTTATCCCTCCC CTTAACTTGTAAAGATTAGATTTTCCTAGAGATTTGGATGTGTGTTCCTG GACATTTTGAGAGTACAAAATGTTTATGCTGAATATTGGCTCTTTATAAC TTATAACGTGTTTTGTGTATACCACCTTCATTGTGAATGCCTGTTGTTAC ATCAAATAAAGTAATAAGTATTAGAAATTGAAAAGAGCTCATATCCCTCC CCTCAAAGTGATATCCCCTCTTGTTATTCCCCAAAAACTGTGCTTTAAAG CCTCCTTGATTTAAAGAAGCTTTGTCGGTGTACTCTAATACGAAGCTTAA TGTGGCTAGTTGTTATCTGGGCATTATTGGATTGGTTTTCATTTTCTAAA ATAATCCACCAAACTATCTCTATCCATTGATTACAGTACTAAGATTTCGG AATACGCCAATAATTTCGGAATACGCTCTCCCGTGCTACCGCTTTCTTTG TATAGAAAATGTTGTAACGCTATGTGACTAGTAATTTTGTCTTCATAGCT AATTAATTATGTTTCGAAATGCAAATTAAACTTCGACCATGAGTAGCCTA ATTATTTAGATTGATTGTATGTAATGGTCATATGCTATCTCAAAATAATG CCAAAATAAAAAAGAGGGATTAATTGTCGAGCAAGTCAAGGATTTGATTT TTCCTTCATACATAAAATGAAATGCGAATTAGATTAGATCTTATCTTGAT CAAATTAATTCATTCATCTTGTTGGTTATGCATTTAGTAAACCCACATTA CGTAAGGGACCAAAAATAACCAGCCAATCATTTTGGTCCAAACCGTTGGA TCAGTTCAAGGTTGAATATTTTCTGCTTCGTTTTGTATCCTAATAGTCTG TCAAACCTTCGAGGATCGCTGGTCAAGATTCGGTGCTTGCTGCATAATAG CTCGACATCTTTGTTGCTCACATATTGCATAACCATTTAAGAGATTTGTA TTTTGATGTCAAAGTCATTAGACAATGTAAATAGACACAAAGAGCACTTG AGATGTCGCCAAAAATGACATTTCGACATCTTTTCTGGTTTGAAATTGAA ATGCTTCACAAAGTTTGATCTTGTTAGTCTTCATGTTAAGACTGTTAGCG ATTTAATGCTCCTGGCGACTCTGTCTTATGCCAGTCTGACACTGAGGTCA TTTCATATCTACCTCATCTCAAGTGTATCTCACGTTTAGAACTCGTTCCA GCTCATTATCCCTGTAATATAGTCAAAATTCGAAATCTCTATGGTCAGAG ACTCGCTTTTTTTTAAAGAATGGTGTTTTTTCATTTCATGATGGATATTC TTAACTTTTATGGGAAAATCATCCTAAAATATTCTTACAGCATTCTTAGG TTAGGATCCTAATTCAGACTAGATTCAACATTTAGTACATACGTCTCAAC CATAAAATGGCATTTTGTGAAAGGAGTGATCCTTAATACTTGGGGTCATT GGCAATTTGTAATTGAAAATGCTCTAAAAATTGCATTCTTAGCTTAAGTA GCCAATTTCCATGATGGTGATATTCTTAGCATTATTCTTAAATTTTTGGC CAATTTCATCATGAGCATTCTTATAAAGTATATTCTTATAAAAAAGGGTG TATCTTCAATTAATTACAATCTAATAGTCCACGAATTGAGGTTCCAAATA TACTCAAAAGGCTTACTGGCTAATATATATACTTAGGTTGCACCAAGCTT TACCGAATTCTGTGTAGAAAGAAAAATTCTATGTTTACAAAGCGAAAAAT GATTGGAAATCCTGATAATAGCGAATCAAAAATTAAATTCGTCTATTTCA AGAAAAACTGAACAATTTTATCGAATTTGTGTTTCAGATAATTAGCGAGG TGATTAGTAATTTCCTAATGATCCCATGGGTCAATACAAACTGTTAAACT AATGATTTATGTATTGATCAAACACCCGGTTCGATCGAAATGACAAAACA TCTTGTTCTCGATCTTTTGTATCGCCTGTGTCCAAAGCAATTCCCTTCCA ACTGGCTTAACCAGTGTCACAATGATTAAGAACCAAACACATAGATTGTT TTGACACTATTCTTTGTGGACAAGCAAGCGCTTTAGAATCGGTGACATGG ACGTGTTGTATCCTTATTCCTTACTCTATGCAGCACCGTATCCAAACTTT CAGAAGCGAACTTTACAATGGATGGCGGTAAGCAANATGTATTGATCAAA CACCCGGTTCGATCGAAATGACAAAACATCTTGTTCTCGATCTTTTGTAT CGCCTGTGTCCAAAGCAATTCCCTTCCAACTGGCTTAACCAGTGTCACAA TGATTAAGAAACAAACACTTAGATTGTTTTGACACTATTCTTGGTGGACA AGCAAGCGCTTTAGAATCGGTGACATGGACGTGTTGTATCCATATTCCTT ACTCTATGCAGCACCTTATCCAAACTTTCAGAAGCGAACTTTACAATGGA TGGCGGTAAGCAAAGGGCATTTTAGAAGGTTTTATTTTCAAAGCATCTAT ATGTCTCATAGTAAAAAAGGGCCCGATTTTGAATACCTTATCGGGGAAAA AATGTCGGGGAAAGTGACGAAAATTTTGAGGGGGTGACGAAACTTTTCCC CGATATTTTATCACCCGACCAAAGCTTTTACTCGATTTTTTTCCCCCAAC CAAAATTCAAATCAACTTTTGTACGCCTTTATTAACCGAAATTAATGCTT TAAACGTCGAATTAGAAGACCTATTTTCGAGCTAGTGAAGGAAACCATTT CATTTGGACAATTTAGTCGGGTGGAAGTGACGAAAATGCCTCTAGGTGAC GAAATTTTTCCCCGACGAAAAAAAAACCCGACAAAATAAAACTCCGACAT TTTTTCCCTGATAAGATAATGCTCGTAAAAAGTATTCCCAAATTTAGGGG TACCTGATATGTTTGGGGATACCTGATATGTTTGGGGATACCTGTAATTT CATAATTAGGGACGGGGCCTGTTATTTTTTTATGAAATATTTTTCTTGAC TGACCCTATTTCTCATTTTTCAAGACTGTTTTTATAACCTAGTTTGGTCC AGTTTGGTCAGCTATATTTTTCGTAAAAAAATATATTTTTCCACCTTCTC ATTAATGCTGATAAAGTGGCAACAAGAGTGCTAGACAATTGGTTTGGTTT AATACTTCAGTGATGTTAATTTAAAATTTTAACTTTGATCACGATATTTA AACATGGGTCCTTCACTATTTTGCCAAGAAAAAGTTAGCCAACCTAAACA TTAAGGGCAATGTCAATTTATCAGAATATTCAGTACTCAAGCTAGGGCAG ATATTAAATGCTGCAAATAATCATGAACATTTGCATGGTTGTGTGAAATT CTTGCCTGATTGATGACGTGGGCCTTCAACATGCCCCCATGCCAACATGA TTTTGGGATTGATCCAAAAACTGGTCCGAGCTTGCTCTGAACATGCGCTT GGGTCGTCTTAAAACCGGGGGGATTTCATGAATGGCAAAAGAGCACAAAA ATCCTTTATTATTATTTCTAATGTTTTATAATAAAAAATGGGGTAACTCA AAGTCTGGGGGCTACTAAAGAATTCTAAAAGATTTTGGGGGTACCAAAAT ATTAGGGATAACTAAATTTTTTGGGGGGTACCTGAACCCTTGAAGACCCT ATGCCAGGCTCTAAATAGATGGATAAAACTCACCTTAAGAAACAGGAAAC TTCCAGCCATTCAATAAACTATGAACCAGCTTCTAATAGAGATCAGTCTA ACTGAAGAAAATGAAGAGAGAAAATACCTTAAGAAGGTCTGGCATTCCAG GTTTGGATTCATTGAATTCATACCACTGTAATGCAAACTATCCAGGACGC CATGAACAAAATAACTGTTATTAGATAACGATAACAATCGTTTATTTTCT TTTTTGCTGTAGCGATCAACTAGCCTCAGGCTTCCACGCAACCAGACCGC AGCCAACAACGTTTTCTACCAATCACAACGCAAGCAAAGAAAGACATCCT GTGTAACACCTGCGAGGAGGAGAGGCTCCAAGGTATGTAGTCCTGGTATT GTTATTGTGTTCCTGGTTTCTCAACATTCTAGTAAACTAAAGACAATGTA CTATTTAAGGCACAGAAATGCTTGACGAAAATATAGCTAACTTCGAAACC TGGGGCGGAATCGTTCAATATTTGATTATTCTTATTATATTACGAACATA AATTATTAGGGTCTCAAAATTAGACCCTTACGGTTGAGAAAATCTAGCTA AATTTGAGCAGATTTCAGCAAATTGGTGCAAAAAATTTGAACATTTTGTC CATTTTTGTACGGTGGTGAAATGACCTATTTTGCTTGAACCTTAACAAGT ATTTTTATTATATGGTCCCTTGGGATTTCAAACCCAGTTTTTGCCTACTT GGCAAAGCTGGGGAAAATTTTCTAGACTCTTATAAACAGTTATAAAGTCA ACTTTTGAAGATCCTCATTGACAAAAACTAATTGTACCATCTGATAGAGC TTGGATAGCAGATCTCCAAAAAGGAGATTTCATTTGTTTCATTTTGTTTC GACTAAGTCCCCCGAAAATGGATGATACGTCTCTTCAGAAATGCAAATTT TTATGTCAGTATTTTTGAGAAAACTTTGACGAAAAAAATTACTTTCAGCA GACGAATCTCGAAAAGTACTTTCGATTATAGGTATAGTTTAAAGGGTTTC CATGGTTAGATCTTGAGATATTTGAGTTTGAAATTTTGCTAATTCAGCGT TTTTCCAGGTTTTTCAGCATTTTTTTTGCATAGTAATTTTCCTCTTTTGA CAAGAAAACTGTCATTTCTGAGATGAAATAGGAGAGAGCTGTCATGGTCT GAGGAGCCCTCCTTGTCTTTCAGTACCCACCCCCTAAAATCGGCTCCTGT AACCATGTTACTGGTCTTATCCCCGTTTGTGTTGACTTAGCTCTTGGTTT TTATAGAATAGTCTGATCAACCATTTTATTCTCCCATTTTAGCTTTGGGT TGATTCGTTCGAATATGACGAGAGTGATGGATGGACTCCTCAACAAATCA AGCGACAAGAGGTATATATTGTTTGCTTTCTTTATATGTTGATGCTTATT TGCTTCTTTAAAATTTGGAAGGGGAGCTATTCCTCGCGATCCATTATTTA AACTGCACCAATCAGGATCAACTAAAAATTTCTTGGCACAACTAAACGTT ACTCGCAAAACCACACGAACTTTCGTGCAAAATAGTGTATTGTTGCCATT ACATCTGAGGAGATGTGAAAATTAGAGGCTTAGCACAAATGGGTACATTT TAAACGAATGTGGCAATAAATTGCACTTAATCGTGGTGCCCCTTGGCTAG ACAATTCTCAAAATTTTCAAAATTAAATCGTAATATTCGACATTTCCACA AATTTTATTCGTGAATCCCAAAGGAATAACCCGAAGTATTGTGGTAAGGT GCAGCCTTCGGCTGATAATTTTGATGATTAATTTACAAATATAAAGGAAT TCATCTAATAATTACAAAACCTTCACTTATAAAACCTAACTCTTCATTGA AGATTGAAAACTCAGCCTTCAACCGCTTCAGAGTTCGATCGGAAAATATT TGAACTCGATATCCTGTTCTTTTGCAGGCAATCTACGAATTATATTGCGG AGAAACAGACATGGTGGAAGACTTGAAACTGCTACAAGAGGTATAGGTTT TAAATAAATGATTTCTCTTCCCAAAAAGAATTTATACGAGAAAATATGCT TCTCTCGTAGAAAGTATCGGACAAATTTCAACAAATAAATGTTTTAGTTG TCCCTTGAAACTACGGGATAACACCTTTTTATTCAAGCTGATTCTAGCGT CTGAAACAATTAGTGTCTTTGAATAACTGATGTTGGGATATCGTATTGTG TTATGAACGAAGTAAAGGTCGCATTCCGAATTAGCAGGGATTGTTTCTGA TGACAGTTCATCTTGTTCGGTGAAGCTGAAAAACTGGAATACGGGAGTCT ATAAGATTTTCTTCTTCTTAAAATAGCATGAATAGAATGGAATTTCCGTA AAAAAGATCATTTGATTAAATTCGGATGATTCAATTTAAAACTCGCCATT ATTTCGCTAGTCTTGGAAATTCTTAAGATTTTGATTCTTTCTAAGTCATT GATGTTCTTGGTGATCTCGTACCTTCTTGTACCCTTCCTGGTGTGAACAG GGCCTTAATAGATTCACGGAAACTTTTCATCAGAGCTATGAAGATGTATG GGTTGACAGCACTGTTCGAAACAGACAACAAATATCGTGTGTGGTATAAA TCGTACTTTAACTTGCAACTACATTGCTTGCAGTAATACATAACGTTCAA GAAAGCGAGTCCCGGAATATAAGAGATCATAAACACAGCTAGAATAATGA AAAATACGCGCGTTACTCTCTTTTCCTTGATGTAACGCTGAGCGATTGTT TTACGGTTTGCTGTCAAGGAATCTTCCAAGCGCTTCTTGAACTCTTCTTC GTTGCTTTTCATGAAGCGATGGACTCCGAAATACACAAAGGCTATAACAA AAAATCCAATCGCGATTGCACCATAATAAAAACCAGCAAAGCCATATCTA CGGTTGCCGATGAACGTTACCAAGCAACCGACACCGATGGACAAGACCCA AATAATGATGGATATGACAATACAACGAACCCAGGATAGCTTGATTCGAT ATTTCAATGGATGTGTGATTCCCACATAACGATCAATTGCTAACGCGCAT GTGCTGAGAATCACACTAGCCGCTGATGTTATGGTAGTGCTTTCTTCCAA CGGGCTAAAAGTGATATTCAAACCTTTGAGGGAAGTGTACATGTAGTAAG CGGTTAGAGGCATGGGCACGGCACCTGCGATGAAGTCACATACTGATAGG TTGACCAAGAAATAATTAAAGGGCGTGTGAAGCTTTTTCAAAGGATCGCA TACCACTACAAGAATGATGAGAAAGTTGCCAACGATTGCCAGCACTGATA ATGCGATGAATGAAATGAAAAGTGCGATCGCTGCGTCTGAACCTGTGTCT GCATTTGAACAGTCGCTTGTCATGGTATGGTATACTTCAGAGGTTTTTAG CGAACTGGAAGAAATTCTCACTTTCTTCTCTTGTGATATGCATATTTTTT TAACTTTCTTAAAATCGTGTCATGGTATGGGCTGTTTGTGTTTTTTCAGA TCTCATGATGCTAGTCAGTGTTTATTTAAGGATTTTTTGACAGCATGATG TAACTTGACAACAAGCGTGTCCTATGAAGAGGCAATTCTGAATGAAAACC GCATTCAGCGAAATTCCTGGATATCTCGAAGTTAGGAGAAGCCACTCGGT TGTTTGGGCGTATGGTTGACAGGACCTGACAATTGTGGCAAACCTCTTGT CAGAAAAATGAAATATCATTGAAACGGTGATTTACCGAACAATGAATGAT GAGATTTTTCTTTCTATGAAAGAAAACCCTAACGATCTGCATCGTGCAAT TAAAAAACTGTCTGGTTTAGTCCACCACAAGTTATTATTTAAAGGGGTAC TTAATTTAGATGACGTCATTTGATCATTTTATATCTTGTAAACATTTTAA TATTTTAATTCATGTAACGTTTTCCCCGGCGTCCCTGGTGTTTAATTTTA TCGGCAGTGAGAGGGAGGGTGGTGCTAGGTTTTAACACTTTGATATGACG AGTACTTTCGTGTTCTAGGTTTTTCGGGTTTATTCCATTCAAATATAACG ATACAATATTTTTTTGTTTAGGTTTACTTCAATCCGGTGGCCAAATTAAA ACTTTTGACGGAAGAAGACCTCGCCTCCATCTTCGGAAATATTCAAGTTT TGCTACCGTTACACGAGGGTAAGACTCTTTTAATTTTTCAGCTTACAAAC TCTTTAAAACGTAATTTTGCTTTCGCAGGTTGCTCGAGGTCGTATTTGAG GAGTTTTACCAACATAGCGGTCTCTACCACGTGATTGCATGTCGGATCTT TGTGAGCAGTTTGCCTCCATTCTATGATTATTCATCTGTTGAATTCTTCA ACATCATTTGCAGTTCTTTTCATTGCTTCTTTTCGACTTCTTTTTGTCGG TGACAATGATGTCAAAGTGATCAAGTCTTGTTGTATGCTTTACTTTCATT CAAACTTGCTCCGTAGTCACAGAGCTTTCCAATGAATCGATTACGTTTTT GTTTTTGCTGTGTCATCGTCAAAATAATCAAACAGAGAAACCAAAAAGAA TCTGAAAAAGAGTCTTTCCCACCGCGTCCGCAAAGATGAACAGTTTTGGT AAACTGATTCCATTTTAAGAACACTAAATAGTTCAAACTTAATGTTAATA TATCAAGACATTTACTTTTGTACTGACACACTGAGTCTATGTATGCGTTC CCCAAATAATTGGAATGTTCAAACGTGTTCGCCCTTCGTCTCTGTCTTGT TCTATAGAAATAGATTCTCTTGTTAATCGCCAGCTTGTAACAGTGAGGCT TTTTGTAGCCTGTAATACGATACACTTATGTCACGCAGTCGTGGTGGTGA GCCGACTGAAAAAAGAACTTTCTCAATCTTTACTCCAAATGTTTTAAGCT TAATAGGGTGAAATATGTAAACATGTAACGAGTGACGAGTTCATCTCAAC CCGAGAGCTTTTTCTTTTCGCTCGCTATGGGTCGTTTATTCATCATTCGC TGTCCCTCTTTTCGGTTTTCTTTCAATAATATTCTCGCATACATAAGCTC TTATGAAAGTGTCAAAAATAACTTTATCAGATTCCACACATATCACCACC ACTCAGCATTTCAACCGCGGTTCCTTGACCACTATCATTCCTATCTTTTC ATCAAAATATCATGTTTATTTATTTGGGTGTTTACCATTTTGATCACAAA GATCCATGCATTTTTCTCTAGTGTATCATGAATTAAACGTATCATAAAGT CTCTCTCTTTGAAATGAGTCATTTTTGCTGCTTTTTGACGAAATGTTTTC ATAATATGGTCAAAGAAAACAAGAAATGCAAAACCAACACCTTGCACTCA CCGCCGTCACTTTCAAAGTCAACAAATACTCACAAGTCACAACGACGACC CTTTGACGTCATCGTTCAGCCTCAATGCCAAACATAGCAACAAATATCCA AACTCTATCTAATGCAAGCATCATCTTTTGGCATTTGCCCAAATATCTCT ATTCGTCATACTCCAATTTAGATACTTGATAAGTTTTTTTGGATAAAAAT CTTTATAATTCTACCTAACATGTCTTTCCTTTCTTATCCACTGTTATTGA CAATTTCGTCAAGAATTCTTCACTCTGTATTGTTATAGATTTGGTGAAAC GTTTGGAAGAAGTACGGACGGAGAACGGAAGCATCGAAGAGATCGGACGA ATTTTGACGGAATGGATTCCCACGTTGCGCCCTTACATTCCGTATTGCGC CAATCAACTACAAATGAAAAACATGCTCCTCCACAAGACCAAAGAAAATA AACACTTTTCAGATTTCTTACAAGTAAGCATGACCTTTTTTCCTTCATTT TTCTTCTCCCGTTTTTTTTCTTCTTTCTTTTCTCCCANCTTTTTCCTTCA TTTTTTCTTCTCCCGTTTTTTTTCTTCTTTCTTTTCTCCCAAAACTTTGA CGACGACCTCAAATTGTGTATTTATTTCAAAACCTGACCTTTTACGACAT CAAGTATGAAAAAACGTGCGGTTGATTCGTATTGTATAAGGTGTGGTTAT TCAATAGACGTGGTTTTGAAGGATAGCAAATAGAGATGGTTAGTGATAAG ATAAGGGATAGGTAATCATATCTTGGTAGACCCTGATTAACAAATCATTC GTTGAAAATGTGATGTTAAGCGCCAACGGATTATCGTACAATTGAATCAA CAAGCCAACGTCTCTTTTGATAATCCTATCTTTCCAACTGAATAAGCTTT ATCAAAATGACTATTAGACTCATCTATGCTCCTATCATTACCCTAATCAC CAGTTTTTCCTTCCCTTTCTTCATAGAGATGTTTGGAATCGCCATTCAGC CGTAAACTAGACCTTTGGTCTTTCTTAGGTAATCATTATATTACTCAAAC CCACCTTTCGCCCAATCATCAAACAAATTTACACGCTTTTTTTTTATAAG AATGGTGTTTTTTCATTTCATCATGGATATTCTTAACTTTTTGACGAAAA TCATCCAAAAATATTCTTACGGTATTCNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCATGATGGTGATATTCTT ACCATATTCTTAATTTTTTGGCCATTTTCATCATGGACATTCTTATAAAG TGTATTCTTATAAAAAAAAAAGCGTGTACTGTCTTTGCACTAGCCTTTTC ATTGTAATTTGCTAAGTACTCATTTGACCTGTCTTCCTTTGCTTGACTTT CACGTTTCATAATCTCTCTTCTCTCCTTTGTATTCATCAGATTCACCTAG AAGCAAACTGGTGAAATATCCGCTACTTATCTCCAACATGCATAAATATG TAAGCTTTTTGTCACTTTTTCTTTCTTTACGCTTATGGGAGATGACGCAT CGTAAAATGACATGTATATGTCTGATGTGTTTAGTGCCCAAGTGTCAATC CTCTTAACAATGCAAAAAGTGCTTTTCATCATTACTTTTTAAACCTTCTT TTGTTTTGGTTTTGTTTGTAGACGCCGAAAGAACATCCAGATAATATCAT CTTATACCAAGCAGTAAGTGATGTTTTGTCTAACAAATCATACATTTTAC TACCCTGTCTCCCCTCTGATAACAGCTGTTTATTTGTCCCTTTTTTGAAG CTGTAAAATTGATGTGTTTTTTGGTGATGTATCCTTTCACTATCACATCA TCAGTCTGTCATAGTGTAAATATGATGACATGTGGAGTCCTTTATTGATA ATAAACGGGAATCTCAGGGGTTTCCACCGATTGAGCGTTTTCTCTACATT TCCTTCTTGTTTTCTTTGCGCTGACTAAATTGGAAAAATAACGGCTCATA GTTTTGATATTCTAAATCTCTGACAAGAATCTCAATTATGTTGAAGTTCT ATAAATAAGTTAAGACACCCCTTCTTCTCTTATATTTGGTTCGATTAAGG AGATTATTTCAAATTTTTTTCTTCGTCAGATTCAAGAATTGGAGGTTATA ATAAAAGAGGCAGATAAAGCCACAGGAAAATCGAAGGTAAAGTTCCTCTT TATCTCTCACTGACCCTTGTAAACAACTCAAACTACTTGAACCATGTGAT TAAAACTCTCCACCGTTTCTTACTTTTAGAGTTCATTCTACAAAGACCGC ATGTATTTTCTGGACGAAGGAGACCACAGAGAAGCATTATCTCAAGCACA AGTCCTTCTTTGTCACGGTTCTCTCAAAAACAAGAATGGAGGGGTGAGTG GTTAATCCTCGTCCCTGACAACCTCTCTGTAATAAGTCAGATTTTTCAAT CGATCTCTTGCTGTCCATGATGACTTATCACGCGTTATCAATTAGCTAAT TAAGATATATCGAACACAAAATGAGAGCTAATTCTGAACCAATATATTTC TTTTTTCAGAAAATCGAAGCGTTTCTCTTTGATACAGTATTTCTAATCAC GCGGCCCGCTTCACGAAATGGTATGGAAATGTATCAAGTATTATCTCAGG TAATTTAGCATTCTCTTTACACGCTTGATTTGCGATGTATTAGCACGAGA TGATTGAATGGCGCCATCGCTTGTTTACTAGCCTGCACCAGTCCTTTATA AACATGTTTAGCCCCCAAACTGTGCATTCTTTACAAGAGAATTTGATTGT AATGAGAATGATTGAGAAGCATCTCTTTGAATGAACTGCTTGTACGCCAG TGAGAGATAAAAATCACCCATCTTTCTTTCACATTCTTGATGGTCTTTAT GAAGAGAAATAAAGGTTATAATACTCTTCGAAGTTCATTCATGATTAACA TTTATTTTCGTTGAAAAGCTCACCCTTAATCTTTTTGAGCTCGGTAAGAA AGAAGTTGATTCGACTGAAAATGTTATTCATTTCTAAGACGTCTTAGCTT GCTCTATACTAGCATCATTGTCCAGTGGCACGGTCTATTCAATCAAAATT CAAACCCTCTTTTGAGAAGCTAATAATTTGTTAAGCTTGTTAAATCTCTC TATGATGCCTTCACCCAAAATAATTCAAGCTTGTAATTTTGTACACAATC AAATTTGATGAAATTACTTGCTTTAAAAACTCAATTAACAACTCCACTTA ATTTAACAAAATTTTGAGCAGCTGGCTCGAAAACCTTTTTGTCAATTATA TCCTAAATGCATTCCTTTTTTCTTTGATCACTTTAGCCTCTACTCACGAA TGACATGGAATATGCCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTT CATTTCGATCCAGTCTAACGAAGGGGCCGACAGGTAAGAAATGAAGTGCG GTTTTTGATGCCTTCTACCGGAAACTGTAACGGTCTTCTCAATATTTCCG GCGTATTTTTGTATTTTTGTTGTTTGATTGACATTCGAAAACAAACGTCG TTACAGTGTTGAAAGTTGAGGAGAAAATAATTATGAGATTAAAGTCGATC ATTAATTCCTTGCAATCTTCTACTCTAAGCATCGATTTAACGAAGGAAAA GGGGATTGATCTTGTGAAAGATAATATATTTGCACTGCACTGATGTTGTT GGAAGGTTCAATCATTATTGACTCTTACTCTGTTTCAGCTAAATTTGCAT TTCGTGTGAATCCAAAAGAATTAACACGAGGTAAATCCATTATATTGCAA GCTAACGACCAACATGACAAAAAACAATGGTTGAACGCTCTAAGCAAAGT AGCCTCAATGCCAAGCAAAGGTGATCCAAGCTAGATGAGTAGAGTTGAGA ACAGGTGGTGAAATGTGAGGGATGTCTTCGACAAGACAGTGATGATCTGC TCGATCAATTCGAGCGAATGGCACCCTAAAGGATGCGATCGATATCGATT CGTCGACACTGATGAAAATAGACGTCTAACGTCAAGTTAATTGCAACTTT GTTCGGGTTCGGGCTTGCTGTCGTACCAATGTAACCGATTAAATTAAAAA GACAATTTTTTTTAGAAAACCGTTTTTTAGAAAACCGTTAAAAAATGTTT TAAAAACTTGGAAAATAATTTTTGATACCAATGCATAAAATGGACAATTT TTTTATATGATGACACGTACTCGTATGCTTGTATTTATGTTGTTTTTTTT TTCGTTCAGTGTGTTGTGTGATTGAGATGAAGACAATTTTTATCCTGTTT GTCTTTCGCAAGGACTCGCCTATCGGATATATCATAAAACCTGTGTGGTT TTGTAGAGTTCTATTTCGCACTTTATGTCGGCTGTTGAAAGATCATAAGA AAAATATTTGACGACAACCTATACATCATCCGTTTTTCGATTCTCGCCCT CCCTTGGGTTTGTTATGATGTATCAAAGTTCGACCTCTCAAAATAAAGCT TTTCTTTCACCTTTTATTTTTGTATTCGTAATTTTTGTTAATATTTTTCC CGAATTTTTTCATTACTGTATTTGTTTAAAATTGTCAGAGAATATTTTTG TACTTTTTTTCCTTCTATTGAAAGAAAATACACTATCCAGAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000629XLOC_000629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001120-exon-sc0000007-1575043694:453299..453495TCONS_00001120-exon-sc0000007-1575043694:453299..453495Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:449064..449183TCONS_00001120-exon-sc0000007-1575043694:449064..449183Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:448035..448103TCONS_00001120-exon-sc0000007-1575043694:448035..448103Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:447406..447468TCONS_00001120-exon-sc0000007-1575043694:447406..447468Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:445228..445324TCONS_00001120-exon-sc0000007-1575043694:445228..445324Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:443573..443757TCONS_00001120-exon-sc0000007-1575043694:443573..443757Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:443018..443069TCONS_00001120-exon-sc0000007-1575043694:443018..443069Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:442397..442455TCONS_00001120-exon-sc0000007-1575043694:442397..442455Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:442183..442224TCONS_00001120-exon-sc0000007-1575043694:442183..442224Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:441710..441766TCONS_00001120-exon-sc0000007-1575043694:441710..441766Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:441503..441616TCONS_00001120-exon-sc0000007-1575043694:441503..441616Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:440463..441336TCONS_00001120-exon-sc0000007-1575043694:440463..441336Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1575043694:439248..440157TCONS_00001120-exon-sc0000007-1575043694:439248..440157Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:453299..453495TCONS_00001120-exon-sc0000007-1510915933:453299..453495Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:449064..449183TCONS_00001120-exon-sc0000007-1510915933:449064..449183Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:448035..448103TCONS_00001120-exon-sc0000007-1510915933:448035..448103Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:447406..447468TCONS_00001120-exon-sc0000007-1510915933:447406..447468Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:445228..445324TCONS_00001120-exon-sc0000007-1510915933:445228..445324Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:443573..443757TCONS_00001120-exon-sc0000007-1510915933:443573..443757Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:443018..443069TCONS_00001120-exon-sc0000007-1510915933:443018..443069Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:442397..442455TCONS_00001120-exon-sc0000007-1510915933:442397..442455Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:442183..442224TCONS_00001120-exon-sc0000007-1510915933:442183..442224Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:441710..441766TCONS_00001120-exon-sc0000007-1510915933:441710..441766Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:441503..441616TCONS_00001120-exon-sc0000007-1510915933:441503..441616Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:440463..441336TCONS_00001120-exon-sc0000007-1510915933:440463..441336Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1510915933:439248..440157TCONS_00001120-exon-sc0000007-1510915933:439248..440157Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:453299..453495TCONS_00001120-exon-sc0000007-1491911889:453299..453495Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:449064..449183TCONS_00001120-exon-sc0000007-1491911889:449064..449183Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:448035..448103TCONS_00001120-exon-sc0000007-1491911889:448035..448103Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:447406..447468TCONS_00001120-exon-sc0000007-1491911889:447406..447468Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:445228..445324TCONS_00001120-exon-sc0000007-1491911889:445228..445324Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:443573..443757TCONS_00001120-exon-sc0000007-1491911889:443573..443757Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:443018..443069TCONS_00001120-exon-sc0000007-1491911889:443018..443069Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:442397..442455TCONS_00001120-exon-sc0000007-1491911889:442397..442455Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:442183..442224TCONS_00001120-exon-sc0000007-1491911889:442183..442224Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:441710..441766TCONS_00001120-exon-sc0000007-1491911889:441710..441766Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:441503..441616TCONS_00001120-exon-sc0000007-1491911889:441503..441616Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:440463..441336TCONS_00001120-exon-sc0000007-1491911889:440463..441336Clytia hemisphaericaexon
TCONS_00001120-exon-sc0000007-1491911889:439248..440157TCONS_00001120-exon-sc0000007-1491911889:439248..440157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:439248..453495 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000448476 0.191524 0 0.107432 0.924553 0.617723 0.660898 0.817121 0.652312 0.727081 0.424003 1.15315 0.262262 0.34544 0.499162 0.11375 0.620444 0.231524 0.37071 0.49285 0 9.92277e-05 0.0211428 0.134044 0 0.050382 0 0.0827523 0.013937 0.0932845
Blast
BLAST of TCONS_00001120 vs. Swiss-Prot (Human)
Match: ARHG8 (Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.356e-84
Identity = 136/298 (45.64%), Postives = 201/298 (67.45%), Query Frame = 3
Query:  258 SQRKQRKTSCVTPARRRGSKLWVDSFEYDESDGWTPQQIKRQEAIYELYCGETDMVEDLKLLQEVYFNPVAKLKLLTEEDLASIFGNIQVLLPLHEDLVKRLEEVRTENGSIEEIGRILTEWIPTLRPYIPYCANQLQMKNMLLHKTKENKHFSDFLQRCLESPFSRKLDLWSFLDSPRSKLVKYPLLISNMHKYTPKEHPDNIILYQAIQELEVIIKEADKATGKSKSSFYKDRMYFLDEGDHREALSQAQVLLCHGSLKNKNGGKIEAFLFDTVFLITRPASRNGMEMYQVLSQVI 1151
            +Q+   +++  TPA+RR S LW +  +    +  T ++I+RQEAIYE+  GE D++EDLKL ++ Y +P+ KL +++EE+L  IFG++   +PLHEDL+ R+ E    +G++E+IG IL  W+P L  Y  YC+NQL  K  LL + K++    DFLQRCLESPFSRKLDLWSFLD PRS+LVKYPLL+  + K+TPKEHPD  +L  AI  ++ ++ + +   G+S+  +Y D++ +LDE      +  ++VLLCHG L++K+G K+  FLF  + ++TRP +RN    YQV  Q I
Sbjct:  135 AQKFSSRSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAK-ALLDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPI 431          
The following BLAST results are available for this feature:
BLAST of TCONS_00001120 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHG82.356e-8445.64Neuroepithelial cell-transforming gene 1 protein O... [more]
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