TCONS_00001118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001118
Unique NameTCONS_00001118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2029

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001118 ID=TCONS_00001118|Name=TCONS_00001118|organism=Clytia hemisphaerica|type=transcript|length=2029bp
TGTTGTATCCATATTCCTTACTCTATGCAGCACCTTATCCAAACTTTCAG
AAGCGAACTTTACAATGGATGGCGCGATCAACTAGCCTCAGGCTTCCACG
CAACCAGACCGCAGCCAACAACGTTTTCTACCAATCACAACGCAAGCAAA
GAAAGACATCCTGTGTAACACCTGCGAGGAGGAGAGGCTCCAAGCTTTGG
GTTGATTCGTTCGAATATGACGAGAGTGATGGATGGACTCCTCAACAAAT
CAAGCGACAAGAGGCAATCTACGAATTATATTGCGGAGAAACAGACATGG
TGGAAGACTTGAAACTGCTACAAGAGgtTTACTTCAATCCGGTGgccaaa
ttaaaacttttgacGGAAGAAGACCTCGCCTCCATCTTCGGAAATATTCA
AGTTTTGCTACCGTTACACGAGGATTTGGTGAAACGTTTGGAAGAAGTAC
GGACGGAGAACGGAAGCATCGAAGAGATCGGACGAATTTTGACGGAATGG
ATTCCCACGTTGCGCCCTTACATTCCGTATTGCGCCAATCAACTACAAAT
GAAAAACATGCTCCTCCACAAGAccaaagaaaataaacacttttcAGATT
TCTTACAAAGATGTTTGGAATCGCCATTCAGCCGTAAACTAGACCTTTGG
TCTTTCTTAGATTCACCTAGAAGCAAACTGGTGAAATATCCGCTACTTAT
CTCCAACATGCATAAATATACGCCGAAAGAACATCCAGATAATATCATCT
TATACCAAGCAATTCAAGAATTGGAGGTTATAATAAAAGAGGCAGATAAA
GCCACAGGAAAATCGAAGAGTTCATTCTACAAAGACCGCATGTATTTTCT
GGACGAAGGAGACCACAGAGAAGCATTATCTCAAGCACAAGTCCTTCTTT
GTCACGGTTCTCTCAAAAACAAGAATGGAGGGaaaatcgaaGCGTTTCTC
TTTGATACAGTATTTCTAATCACGCGGCCCGCTTCACGAAATGGTATGGA
AATGTATCAAGTATTATCTCAGCCTCTACTCACGAATGACATGGAATATG
CCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATTTCGATCCAGT
CTAACGAAGGGGCCGACAGCTAAATTTGCATTTCGTGTGAATCCAAAAGA
ATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGACCAACATGACA
AAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAATGCCAAGCAAA
GGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGTGAAATGTGAG
GGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAATTCGAGCGAAT
GGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACACTGATGAAAAT
AGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTTCGGGCTTGCT
GTCGTACCAATGTAaccgattaaattaaaaagacaattttttttagaaaa
ccgttttttagaaaaccgttaaaaaatgttttaaaaacttggaaaataat
ttttgataccAATGCATAAAATGgacaatttttttatatgatGACACGTA
CTCGTATGCTTgtatttatgttgttttttttttcgttcagtgTGTTGTGT
GATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGCAAGGACTCGC
CTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGTTCTATTTCGC
ACTTTATGTCGGCTGTTGAAAGatcataagaaaaatatttgacgacaACC
TATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGTTTGTTATGAT
GTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCaccttttattt
ttgtattcgtaatttttgttaatatttttcccGAATTTTTTCATTACTGT
ATTTGTTTAAAATTGTCAGAGAatatttttgtactttttttccTTCTATT
GAAAGAAAATACACTATCCAGAATACAAA
Run BLAST on NCBI

transcript from alignment at sc0000007:439248..450714-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001118 ID=TCONS_00001118|Name=TCONS_00001118|organism=Clytia hemisphaerica|type=transcript|length=11467bp|location=Sequence derived from alignment at sc0000007:439248..450714- (Clytia hemisphaerica)
TGTTGTATCCATATTCCTTACTCTATGCAGCACCTTATCCAAACTTTCAG AAGCGAACTTTACAATGGATGGCGGTAAGCAAAGGGCATTTTAGAAGGTT TTATTTTCAAAGCATCTATATGTCTCATAGTAAAAAAGGGCCCGATTTTG AATACCTTATCGGGGAAAAAATGTCGGGGAAAGTGACGAAAATTTTGAGG GGGTGACGAAACTTTTCCCCGATATTTTATCACCCGACCAAAGCTTTTAC TCGATTTTTTTCCCCCAACCAAAATTCAAATCAACTTTTGTACGCCTTTA TTAACCGAAATTAATGCTTTAAACGTCGAATTAGAAGACCTATTTTCGAG CTAGTGAAGGAAACCATTTCATTTGGACAATTTAGTCGGGTGGAAGTGAC GAAAATGCCTCTAGGTGACGAAATTTTTCCCCGACGAAAAAAAAACCCGA CAAAATAAAACTCCGACATTTTTTCCCTGATAAGATAATGCTCGTAAAAA GTATTCCCAAATTTAGGGGTACCTGATATGTTTGGGGATACCTGATATGT TTGGGGATACCTGTAATTTCATAATTAGGGACGGGGCCTGTTATTTTTTT ATGAAATATTTTTCTTGACTGACCCTATTTCTCATTTTTCAAGACTGTTT TTATAACCTAGTTTGGTCCAGTTTGGTCAGCTATATTTTTCGTAAAAAAA TATATTTTTCCACCTTCTCATTAATGCTGATAAAGTGGCAACAAGAGTGC TAGACAATTGGTTTGGTTTAATACTTCAGTGATGTTAATTTAAAATTTTA ACTTTGATCACGATATTTAAACATGGGTCCTTCACTATTTTGCCAAGAAA AAGTTAGCCAACCTAAACATTAAGGGCAATGTCAATTTATCAGAATATTC AGTACTCAAGCTAGGGCAGATATTAAATGCTGCAAATAATCATGAACATT TGCATGGTTGTGTGAAATTCTTGCCTGATTGATGACGTGGGCCTTCAACA TGCCCCCATGCCAACATGATTTTGGGATTGATCCAAAAACTGGTCCGAGC TTGCTCTGAACATGCGCTTGGGTCGTCTTAAAACCGGGGGGATTTCATGA ATGGCAAAAGAGCACAAAAATCCTTTATTATTATTTCTAATGTTTTATAA TAAAAAATGGGGTAACTCAAAGTCTGGGGGCTACTAAAGAATTCTAAAAG ATTTTGGGGGTACCAAAATATTAGGGATAACTAAATTTTTTGGGGGGTAC CTGAACCCTTGAAGACCCTATGCCAGGCTCTAAATAGATGGATAAAACTC ACCTTAAGAAACAGGAAACTTCCAGCCATTCAATAAACTATGAACCAGCT TCTAATAGAGATCAGTCTAACTGAAGAAAATGAAGAGAGAAAATACCTTA AGAAGGTCTGGCATTCCAGGTTTGGATTCATTGAATTCATACCACTGTAA TGCAAACTATCCAGGACGCCATGAACAAAATAACTGTTATTAGATAACGA TAACAATCGTTTATTTTCTTTTTTGCTGTAGCGATCAACTAGCCTCAGGC TTCCACGCAACCAGACCGCAGCCAACAACGTTTTCTACCAATCACAACGC AAGCAAAGAAAGACATCCTGTGTAACACCTGCGAGGAGGAGAGGCTCCAA GGTATGTAGTCCTGGTATTGTTATTGTGTTCCTGGTTTCTCAACATTCTA GTAAACTAAAGACAATGTACTATTTAAGGCACAGAAATGCTTGACGAAAA TATAGCTAACTTCGAAACCTGGGGCGGAATCGTTCAATATTTGATTATTC TTATTATATTACGAACATAAATTATTAGGGTCTCAAAATTAGACCCTTAC GGTTGAGAAAATCTAGCTAAATTTGAGCAGATTTCAGCAAATTGGTGCAA AAAATTTGAACATTTTGTCCATTTTTGTACGGTGGTGAAATGACCTATTT TGCTTGAACCTTAACAAGTATTTTTATTATATGGTCCCTTGGGATTTCAA ACCCAGTTTTTGCCTACTTGGCAAAGCTGGGGAAAATTTTCTAGACTCTT ATAAACAGTTATAAAGTCAACTTTTGAAGATCCTCATTGACAAAAACTAA TTGTACCATCTGATAGAGCTTGGATAGCAGATCTCCAAAAAGGAGATTTC ATTTGTTTCATTTTGTTTCGACTAAGTCCCCCGAAAATGGATGATACGTC TCTTCAGAAATGCAAATTTTTATGTCAGTATTTTTGAGAAAACTTTGACG AAAAAAATTACTTTCAGCAGACGAATCTCGAAAAGTACTTTCGATTATAG GTATAGTTTAAAGGGTTTCCATGGTTAGATCTTGAGATATTTGAGTTTGA AATTTTGCTAATTCAGCGTTTTTCCAGGTTTTTCAGCATTTTTTTTGCAT AGTAATTTTCCTCTTTTGACAAGAAAACTGTCATTTCTGAGATGAAATAG GAGAGAGCTGTCATGGTCTGAGGAGCCCTCCTTGTCTTTCAGTACCCACC CCCTAAAATCGGCTCCTGTAACCATGTTACTGGTCTTATCCCCGTTTGTG TTGACTTAGCTCTTGGTTTTTATAGAATAGTCTGATCAACCATTTTATTC TCCCATTTTAGCTTTGGGTTGATTCGTTCGAATATGACGAGAGTGATGGA TGGACTCCTCAACAAATCAAGCGACAAGAGGTATATATTGTTTGCTTTCT TTATATGTTGATGCTTATTTGCTTCTTTAAAATTTGGAAGGGGAGCTATT CCTCGCGATCCATTATTTAAACTGCACCAATCAGGATCAACTAAAAATTT CTTGGCACAACTAAACGTTACTCGCAAAACCACACGAACTTTCGTGCAAA ATAGTGTATTGTTGCCATTACATCTGAGGAGATGTGAAAATTAGAGGCTT AGCACAAATGGGTACATTTTAAACGAATGTGGCAATAAATTGCACTTAAT CGTGGTGCCCCTTGGCTAGACAATTCTCAAAATTTTCAAAATTAAATCGT AATATTCGACATTTCCACAAATTTTATTCGTGAATCCCAAAGGAATAACC CGAAGTATTGTGGTAAGGTGCAGCCTTCGGCTGATAATTTTGATGATTAA TTTACAAATATAAAGGAATTCATCTAATAATTACAAAACCTTCACTTATA AAACCTAACTCTTCATTGAAGATTGAAAACTCAGCCTTCAACCGCTTCAG AGTTCGATCGGAAAATATTTGAACTCGATATCCTGTTCTTTTGCAGGCAA TCTACGAATTATATTGCGGAGAAACAGACATGGTGGAAGACTTGAAACTG CTACAAGAGGTATAGGTTTTAAATAAATGATTTCTCTTCCCAAAAAGAAT TTATACGAGAAAATATGCTTCTCTCGTAGAAAGTATCGGACAAATTTCAA CAAATAAATGTTTTAGTTGTCCCTTGAAACTACGGGATAACACCTTTTTA TTCAAGCTGATTCTAGCGTCTGAAACAATTAGTGTCTTTGAATAACTGAT GTTGGGATATCGTATTGTGTTATGAACGAAGTAAAGGTCGCATTCCGAAT TAGCAGGGATTGTTTCTGATGACAGTTCATCTTGTTCGGTGAAGCTGAAA AACTGGAATACGGGAGTCTATAAGATTTTCTTCTTCTTAAAATAGCATGA ATAGAATGGAATTTCCGTAAAAAAGATCATTTGATTAAATTCGGATGATT CAATTTAAAACTCGCCATTATTTCGCTAGTCTTGGAAATTCTTAAGATTT TGATTCTTTCTAAGTCATTGATGTTCTTGGTGATCTCGTACCTTCTTGTA CCCTTCCTGGTGTGAACAGGGCCTTAATAGATTCACGGAAACTTTTCATC AGAGCTATGAAGATGTATGGGTTGACAGCACTGTTCGAAACAGACAACAA ATATCGTGTGTGGTATAAATCGTACTTTAACTTGCAACTACATTGCTTGC AGTAATACATAACGTTCAAGAAAGCGAGTCCCGGAATATAAGAGATCATA AACACAGCTAGAATAATGAAAAATACGCGCGTTACTCTCTTTTCCTTGAT GTAACGCTGAGCGATTGTTTTACGGTTTGCTGTCAAGGAATCTTCCAAGC GCTTCTTGAACTCTTCTTCGTTGCTTTTCATGAAGCGATGGACTCCGAAA TACACAAAGGCTATAACAAAAAATCCAATCGCGATTGCACCATAATAAAA ACCAGCAAAGCCATATCTACGGTTGCCGATGAACGTTACCAAGCAACCGA CACCGATGGACAAGACCCAAATAATGATGGATATGACAATACAACGAACC CAGGATAGCTTGATTCGATATTTCAATGGATGTGTGATTCCCACATAACG ATCAATTGCTAACGCGCATGTGCTGAGAATCACACTAGCCGCTGATGTTA TGGTAGTGCTTTCTTCCAACGGGCTAAAAGTGATATTCAAACCTTTGAGG GAAGTGTACATGTAGTAAGCGGTTAGAGGCATGGGCACGGCACCTGCGAT GAAGTCACATACTGATAGGTTGACCAAGAAATAATTAAAGGGCGTGTGAA GCTTTTTCAAAGGATCGCATACCACTACAAGAATGATGAGAAAGTTGCCA ACGATTGCCAGCACTGATAATGCGATGAATGAAATGAAAAGTGCGATCGC TGCGTCTGAACCTGTGTCTGCATTTGAACAGTCGCTTGTCATGGTATGGT ATACTTCAGAGGTTTTTAGCGAACTGGAAGAAATTCTCACTTTCTTCTCT TGTGATATGCATATTTTTTTAACTTTCTTAAAATCGTGTCATGGTATGGG CTGTTTGTGTTTTTTCAGATCTCATGATGCTAGTCAGTGTTTATTTAAGG ATTTTTTGACAGCATGATGTAACTTGACAACAAGCGTGTCCTATGAAGAG GCAATTCTGAATGAAAACCGCATTCAGCGAAATTCCTGGATATCTCGAAG TTAGGAGAAGCCACTCGGTTGTTTGGGCGTATGGTTGACAGGACCTGACA ATTGTGGCAAACCTCTTGTCAGAAAAATGAAATATCATTGAAACGGTGAT TTACCGAACAATGAATGATGAGATTTTTCTTTCTATGAAAGAAAACCCTA ACGATCTGCATCGTGCAATTAAAAAACTGTCTGGTTTAGTCCACCACAAG TTATTATTTAAAGGGGTACTTAATTTAGATGACGTCATTTGATCATTTTA TATCTTGTAAACATTTTAATATTTTAATTCATGTAACGTTTTCCCCGGCG TCCCTGGTGTTTAATTTTATCGGCAGTGAGAGGGAGGGTGGTGCTAGGTT TTAACACTTTGATATGACGAGTACTTTCGTGTTCTAGGTTTTTCGGGTTT ATTCCATTCAAATATAACGATACAATATTTTTTTGTTTAGGTTTACTTCA ATCCGGTGGCCAAATTAAAACTTTTGACGGAAGAAGACCTCGCCTCCATC TTCGGAAATATTCAAGTTTTGCTACCGTTACACGAGGGTAAGACTCTTTT AATTTTTCAGCTTACAAACTCTTTAAAACGTAATTTTGCTTTCGCAGGTT GCTCGAGGTCGTATTTGAGGAGTTTTACCAACATAGCGGTCTCTACCACG TGATTGCATGTCGGATCTTTGTGAGCAGTTTGCCTCCATTCTATGATTAT TCATCTGTTGAATTCTTCAACATCATTTGCAGTTCTTTTCATTGCTTCTT TTCGACTTCTTTTTGTCGGTGACAATGATGTCAAAGTGATCAAGTCTTGT TGTATGCTTTACTTTCATTCAAACTTGCTCCGTAGTCACAGAGCTTTCCA ATGAATCGATTACGTTTTTGTTTTTGCTGTGTCATCGTCAAAATAATCAA ACAGAGAAACCAAAAAGAATCTGAAAAAGAGTCTTTCCCACCGCGTCCGC AAAGATGAACAGTTTTGGTAAACTGATTCCATTTTAAGAACACTAAATAG TTCAAACTTAATGTTAATATATCAAGACATTTACTTTTGTACTGACACAC TGAGTCTATGTATGCGTTCCCCAAATAATTGGAATGTTCAAACGTGTTCG CCCTTCGTCTCTGTCTTGTTCTATAGAAATAGATTCTCTTGTTAATCGCC AGCTTGTAACAGTGAGGCTTTTTGTAGCCTGTAATACGATACACTTATGT CACGCAGTCGTGGTGGTGAGCCGACTGAAAAAAGAACTTTCTCAATCTTT ACTCCAAATGTTTTAAGCTTAATAGGGTGAAATATGTAAACATGTAACGA GTGACGAGTTCATCTCAACCCGAGAGCTTTTTCTTTTCGCTCGCTATGGG TCGTTTATTCATCATTCGCTGTCCCTCTTTTCGGTTTTCTTTCAATAATA TTCTCGCATACATAAGCTCTTATGAAAGTGTCAAAAATAACTTTATCAGA TTCCACACATATCACCACCACTCAGCATTTCAACCGCGGTTCCTTGACCA CTATCATTCCTATCTTTTCATCAAAATATCATGTTTATTTATTTGGGTGT TTACCATTTTGATCACAAAGATCCATGCATTTTTCTCTAGTGTATCATGA ATTAAACGTATCATAAAGTCTCTCTCTTTGAAATGAGTCATTTTTGCTGC TTTTTGACGAAATGTTTTCATAATATGGTCAAAGAAAACAAGAAATGCAA AACCAACACCTTGCACTCACCGCCGTCACTTTCAAAGTCAACAAATACTC ACAAGTCACAACGACGACCCTTTGACGTCATCGTTCAGCCTCAATGCCAA ACATAGCAACAAATATCCAAACTCTATCTAATGCAAGCATCATCTTTTGG CATTTGCCCAAATATCTCTATTCGTCATACTCCAATTTAGATACTTGATA AGTTTTTTTGGATAAAAATCTTTATAATTCTACCTAACATGTCTTTCCTT TCTTATCCACTGTTATTGACAATTTCGTCAAGAATTCTTCACTCTGTATT GTTATAGATTTGGTGAAACGTTTGGAAGAAGTACGGACGGAGAACGGAAG CATCGAAGAGATCGGACGAATTTTGACGGAATGGATTCCCACGTTGCGCC CTTACATTCCGTATTGCGCCAATCAACTACAAATGAAAAACATGCTCCTC CACAAGACCAAAGAAAATAAACACTTTTCAGATTTCTTACAAGTAAGCAT GACCTTTTTTCCTTCATTTTTCTTCTCCCGTTTTTTTTCTTCTTTCTTTT CTCCCANCTTTTTCCTTCATTTTTTCTTCTCCCGTTTTTTTTCTTCTTTC TTTTCTCCCAAAACTTTGACGACGACCTCAAATTGTGTATTTATTTCAAA ACCTGACCTTTTACGACATCAAGTATGAAAAAACGTGCGGTTGATTCGTA TTGTATAAGGTGTGGTTATTCAATAGACGTGGTTTTGAAGGATAGCAAAT AGAGATGGTTAGTGATAAGATAAGGGATAGGTAATCATATCTTGGTAGAC CCTGATTAACAAATCATTCGTTGAAAATGTGATGTTAAGCGCCAACGGAT TATCGTACAATTGAATCAACAAGCCAACGTCTCTTTTGATAATCCTATCT TTCCAACTGAATAAGCTTTATCAAAATGACTATTAGACTCATCTATGCTC CTATCATTACCCTAATCACCAGTTTTTCCTTCCCTTTCTTCATAGAGATG TTTGGAATCGCCATTCAGCCGTAAACTAGACCTTTGGTCTTTCTTAGGTA ATCATTATATTACTCAAACCCACCTTTCGCCCAATCATCAAACAAATTTA CACGCTTTTTTTTTATAAGAATGGTGTTTTTTCATTTCATCATGGATATT CTTAACTTTTTGACGAAAATCATCCAAAAATATTCTTACGGTATTCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATT CCATGATGGTGATATTCTTACCATATTCTTAATTTTTTGGCCATTTTCAT CATGGACATTCTTATAAAGTGTATTCTTATAAAAAAAAAAGCGTGTACTG TCTTTGCACTAGCCTTTTCATTGTAATTTGCTAAGTACTCATTTGACCTG TCTTCCTTTGCTTGACTTTCACGTTTCATAATCTCTCTTCTCTCCTTTGT ATTCATCAGATTCACCTAGAAGCAAACTGGTGAAATATCCGCTACTTATC TCCAACATGCATAAATATGTAAGCTTTTTGTCACTTTTTCTTTCTTTACG CTTATGGGAGATGACGCATCGTAAAATGACATGTATATGTCTGATGTGTT TAGTGCCCAAGTGTCAATCCTCTTAACAATGCAAAAAGTGCTTTTCATCA TTACTTTTTAAACCTTCTTTTGTTTTGGTTTTGTTTGTAGACGCCGAAAG AACATCCAGATAATATCATCTTATACCAAGCAGTAAGTGATGTTTTGTCT AACAAATCATACATTTTACTACCCTGTCTCCCCTCTGATAACAGCTGTTT ATTTGTCCCTTTTTTGAAGCTGTAAAATTGATGTGTTTTTTGGTGATGTA TCCTTTCACTATCACATCATCAGTCTGTCATAGTGTAAATATGATGACAT GTGGAGTCCTTTATTGATAATAAACGGGAATCTCAGGGGTTTCCACCGAT TGAGCGTTTTCTCTACATTTCCTTCTTGTTTTCTTTGCGCTGACTAAATT GGAAAAATAACGGCTCATAGTTTTGATATTCTAAATCTCTGACAAGAATC TCAATTATGTTGAAGTTCTATAAATAAGTTAAGACACCCCTTCTTCTCTT ATATTTGGTTCGATTAAGGAGATTATTTCAAATTTTTTTCTTCGTCAGAT TCAAGAATTGGAGGTTATAATAAAAGAGGCAGATAAAGCCACAGGAAAAT CGAAGGTAAAGTTCCTCTTTATCTCTCACTGACCCTTGTAAACAACTCAA ACTACTTGAACCATGTGATTAAAACTCTCCACCGTTTCTTACTTTTAGAG TTCATTCTACAAAGACCGCATGTATTTTCTGGACGAAGGAGACCACAGAG AAGCATTATCTCAAGCACAAGTCCTTCTTTGTCACGGTTCTCTCAAAAAC AAGAATGGAGGGGTGAGTGGTTAATCCTCGTCCCTGACAACCTCTCTGTA ATAAGTCAGATTTTTCAATCGATCTCTTGCTGTCCATGATGACTTATCAC GCGTTATCAATTAGCTAATTAAGATATATCGAACACAAAATGAGAGCTAA TTCTGAACCAATATATTTCTTTTTTCAGAAAATCGAAGCGTTTCTCTTTG ATACAGTATTTCTAATCACGCGGCCCGCTTCACGAAATGGTATGGAAATG TATCAAGTATTATCTCAGGTAATTTAGCATTCTCTTTACACGCTTGATTT GCGATGTATTAGCACGAGATGATTGAATGGCGCCATCGCTTGTTTACTAG CCTGCACCAGTCCTTTATAAACATGTTTAGCCCCCAAACTGTGCATTCTT TACAAGAGAATTTGATTGTAATGAGAATGATTGAGAAGCATCTCTTTGAA TGAACTGCTTGTACGCCAGTGAGAGATAAAAATCACCCATCTTTCTTTCA CATTCTTGATGGTCTTTATGAAGAGAAATAAAGGTTATAATACTCTTCGA AGTTCATTCATGATTAACATTTATTTTCGTTGAAAAGCTCACCCTTAATC TTTTTGAGCTCGGTAAGAAAGAAGTTGATTCGACTGAAAATGTTATTCAT TTCTAAGACGTCTTAGCTTGCTCTATACTAGCATCATTGTCCAGTGGCAC GGTCTATTCAATCAAAATTCAAACCCTCTTTTGAGAAGCTAATAATTTGT TAAGCTTGTTAAATCTCTCTATGATGCCTTCACCCAAAATAATTCAAGCT TGTAATTTTGTACACAATCAAATTTGATGAAATTACTTGCTTTAAAAACT CAATTAACAACTCCACTTAATTTAACAAAATTTTGAGCAGCTGGCTCGAA AACCTTTTTGTCAATTATATCCTAAATGCATTCCTTTTTTCTTTGATCAC TTTAGCCTCTACTCACGAATGACATGGAATATGCCAATGTCAGTGATGGT GAACTCAGGCTAGGTGGTTCATTTCGATCCAGTCTAACGAAGGGGCCGAC AGGTAAGAAATGAAGTGCGGTTTTTGATGCCTTCTACCGGAAACTGTAAC GGTCTTCTCAATATTTCCGGCGTATTTTTGTATTTTTGTTGTTTGATTGA CATTCGAAAACAAACGTCGTTACAGTGTTGAAAGTTGAGGAGAAAATAAT TATGAGATTAAAGTCGATCATTAATTCCTTGCAATCTTCTACTCTAAGCA TCGATTTAACGAAGGAAAAGGGGATTGATCTTGTGAAAGATAATATATTT GCACTGCACTGATGTTGTTGGAAGGTTCAATCATTATTGACTCTTACTCT GTTTCAGCTAAATTTGCATTTCGTGTGAATCCAAAAGAATTAACACGAGG TAAATCCATTATATTGCAAGCTAACGACCAACATGACAAAAAACAATGGT TGAACGCTCTAAGCAAAGTAGCCTCAATGCCAAGCAAAGGTGATCCAAGC TAGATGAGTAGAGTTGAGAACAGGTGGTGAAATGTGAGGGATGTCTTCGA CAAGACAGTGATGATCTGCTCGATCAATTCGAGCGAATGGCACCCTAAAG GATGCGATCGATATCGATTCGTCGACACTGATGAAAATAGACGTCTAACG TCAAGTTAATTGCAACTTTGTTCGGGTTCGGGCTTGCTGTCGTACCAATG TAACCGATTAAATTAAAAAGACAATTTTTTTTAGAAAACCGTTTTTTAGA AAACCGTTAAAAAATGTTTTAAAAACTTGGAAAATAATTTTTGATACCAA TGCATAAAATGGACAATTTTTTTATATGATGACACGTACTCGTATGCTTG TATTTATGTTGTTTTTTTTTTCGTTCAGTGTGTTGTGTGATTGAGATGAA GACAATTTTTATCCTGTTTGTCTTTCGCAAGGACTCGCCTATCGGATATA TCATAAAACCTGTGTGGTTTTGTAGAGTTCTATTTCGCACTTTATGTCGG CTGTTGAAAGATCATAAGAAAAATATTTGACGACAACCTATACATCATCC GTTTTTCGATTCTCGCCCTCCCTTGGGTTTGTTATGATGTATCAAAGTTC GACCTCTCAAAATAAAGCTTTTCTTTCACCTTTTATTTTTGTATTCGTAA TTTTTGTTAATATTTTTCCCGAATTTTTTCATTACTGTATTTGTTTAAAA TTGTCAGAGAATATTTTTGTACTTTTTTTCCTTCTATTGAAAGAAAATAC ACTATCCAGAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000629XLOC_000629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001118-exon-sc0000007-1575043694:450641..450714TCONS_00001118-exon-sc0000007-1575043694:450641..450714Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:449064..449183TCONS_00001118-exon-sc0000007-1575043694:449064..449183Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:448035..448103TCONS_00001118-exon-sc0000007-1575043694:448035..448103Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:447406..447468TCONS_00001118-exon-sc0000007-1575043694:447406..447468Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:445228..445324TCONS_00001118-exon-sc0000007-1575043694:445228..445324Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:443573..443757TCONS_00001118-exon-sc0000007-1575043694:443573..443757Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:443018..443069TCONS_00001118-exon-sc0000007-1575043694:443018..443069Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:442397..442455TCONS_00001118-exon-sc0000007-1575043694:442397..442455Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:442183..442224TCONS_00001118-exon-sc0000007-1575043694:442183..442224Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:441710..441766TCONS_00001118-exon-sc0000007-1575043694:441710..441766Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:441503..441616TCONS_00001118-exon-sc0000007-1575043694:441503..441616Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:441247..441336TCONS_00001118-exon-sc0000007-1575043694:441247..441336Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:440463..440559TCONS_00001118-exon-sc0000007-1575043694:440463..440559Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:439248..440157TCONS_00001118-exon-sc0000007-1575043694:439248..440157Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:450641..450714TCONS_00001118-exon-sc0000007-1510915933:450641..450714Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:449064..449183TCONS_00001118-exon-sc0000007-1510915933:449064..449183Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:448035..448103TCONS_00001118-exon-sc0000007-1510915933:448035..448103Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:447406..447468TCONS_00001118-exon-sc0000007-1510915933:447406..447468Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:445228..445324TCONS_00001118-exon-sc0000007-1510915933:445228..445324Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:443573..443757TCONS_00001118-exon-sc0000007-1510915933:443573..443757Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:443018..443069TCONS_00001118-exon-sc0000007-1510915933:443018..443069Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:442397..442455TCONS_00001118-exon-sc0000007-1510915933:442397..442455Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:442183..442224TCONS_00001118-exon-sc0000007-1510915933:442183..442224Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:441710..441766TCONS_00001118-exon-sc0000007-1510915933:441710..441766Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:441503..441616TCONS_00001118-exon-sc0000007-1510915933:441503..441616Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:441247..441336TCONS_00001118-exon-sc0000007-1510915933:441247..441336Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:440463..440559TCONS_00001118-exon-sc0000007-1510915933:440463..440559Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:439248..440157TCONS_00001118-exon-sc0000007-1510915933:439248..440157Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:450641..450714TCONS_00001118-exon-sc0000007-1491911889:450641..450714Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:449064..449183TCONS_00001118-exon-sc0000007-1491911889:449064..449183Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:448035..448103TCONS_00001118-exon-sc0000007-1491911889:448035..448103Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:447406..447468TCONS_00001118-exon-sc0000007-1491911889:447406..447468Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:445228..445324TCONS_00001118-exon-sc0000007-1491911889:445228..445324Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:443573..443757TCONS_00001118-exon-sc0000007-1491911889:443573..443757Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:443018..443069TCONS_00001118-exon-sc0000007-1491911889:443018..443069Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:442397..442455TCONS_00001118-exon-sc0000007-1491911889:442397..442455Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:442183..442224TCONS_00001118-exon-sc0000007-1491911889:442183..442224Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:441710..441766TCONS_00001118-exon-sc0000007-1491911889:441710..441766Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:441503..441616TCONS_00001118-exon-sc0000007-1491911889:441503..441616Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:441247..441336TCONS_00001118-exon-sc0000007-1491911889:441247..441336Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:440463..440559TCONS_00001118-exon-sc0000007-1491911889:440463..440559Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:439248..440157TCONS_00001118-exon-sc0000007-1491911889:439248..440157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:439248..450714 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.5647e-06 0.0809562 2.41821e-07 4.89278e-07 5.69271 0.00292085 0.241876 0.177334 9.73839e-07 7.09799 2.10434 3.41176 0.000711901 2.53527 0.00237585 0 0.000749264 1.24347e-05 5.48837e-07 0.00749487 0.000675119 0.0491115 0.0022276 1.88978e-05 3.60766 0.00621402 3.05174 0.000383519 3.68966e-07 0.00878905
Blast
BLAST of TCONS_00001118 vs. Swiss-Prot (Human)
Match: ARHG8 (Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 5.890e-106
Identity = 162/376 (43.09%), Postives = 245/376 (65.16%), Query Frame = 3
Query:  135 SQRKQRKTSCVTPARRRGSKLWVDSFEYDESDGWTPQQIKRQEAIYELYCGETDMVEDLKLLQEVYFNPVAKLKLLTEEDLASIFGNIQVLLPLHEDLVKRLEEVRTENGSIEEIGRILTEWIPTLRPYIPYCANQLQMKNMLLHKTKENKHFSDFLQRCLESPFSRKLDLWSFLDSPRSKLVKYPLLISNMHKYTPKEHPDNIILYQAIQELEVIIKEADKATGKSKSSFYKDRMYFLDEGDHREALSQAQVLLCHGSLKNKNGGKIEAFLFDTVFLITRPASRNGMEMYQVLSQPLLTNDMEYANVSDGELRLGGSFRSSLTKGPTAKFAFRVNPKELTRGKSIILQANDQHDKKQWLNAL-SKVASMPSKGDP 1259
            +Q+   +++  TPA+RR S LW +  +    +  T ++I+RQEAIYE+  GE D++EDLKL ++ Y +P+ KL +++EE+L  IFG++   +PLHEDL+ R+ E    +G++E+IG IL  W+P L  Y  YC+NQL  K  LL + K++    DFLQRCLESPFSRKLDLWSFLD PRS+LVKYPLL+  + K+TPKEHPD  +L  AI  ++ ++ + +   G+S+  +Y D++ +LDE      +  ++VLLCHG L++K+G K+  FLF  + ++TRP +RN    YQV  QP+   ++   ++ DG++R+GGSFR + +    AK  FR+   + +  +S  LQAND   K+QW N + + +A   S G P
Sbjct:  135 AQKFSSRSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAK-ALLDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPIPVQELVLEDLQDGDVRMGGSFRGAFSNSEKAKNIFRIRFHDPSPAQSHTLQANDVFHKQQWFNCIRAAIAPFQSAGSP 509          
The following BLAST results are available for this feature:
BLAST of TCONS_00001118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHG85.890e-10643.09Neuroepithelial cell-transforming gene 1 protein O... [more]
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