TCONS_00001118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001118
Unique NameTCONS_00001118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2029

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001118 ID=TCONS_00001118|Name=TCONS_00001118|organism=Clytia hemisphaerica|type=transcript|length=2029bp
TGTTGTATCCATATTCCTTACTCTATGCAGCACCTTATCCAAACTTTCAG
AAGCGAACTTTACAATGGATGGCGCGATCAACTAGCCTCAGGCTTCCACG
CAACCAGACCGCAGCCAACAACGTTTTCTACCAATCACAACGCAAGCAAA
GAAAGACATCCTGTGTAACACCTGCGAGGAGGAGAGGCTCCAAGCTTTGG
GTTGATTCGTTCGAATATGACGAGAGTGATGGATGGACTCCTCAACAAAT
CAAGCGACAAGAGGCAATCTACGAATTATATTGCGGAGAAACAGACATGG
TGGAAGACTTGAAACTGCTACAAGAGgtTTACTTCAATCCGGTGgccaaa
ttaaaacttttgacGGAAGAAGACCTCGCCTCCATCTTCGGAAATATTCA
AGTTTTGCTACCGTTACACGAGGATTTGGTGAAACGTTTGGAAGAAGTAC
GGACGGAGAACGGAAGCATCGAAGAGATCGGACGAATTTTGACGGAATGG
ATTCCCACGTTGCGCCCTTACATTCCGTATTGCGCCAATCAACTACAAAT
GAAAAACATGCTCCTCCACAAGAccaaagaaaataaacacttttcAGATT
TCTTACAAAGATGTTTGGAATCGCCATTCAGCCGTAAACTAGACCTTTGG
TCTTTCTTAGATTCACCTAGAAGCAAACTGGTGAAATATCCGCTACTTAT
CTCCAACATGCATAAATATACGCCGAAAGAACATCCAGATAATATCATCT
TATACCAAGCAATTCAAGAATTGGAGGTTATAATAAAAGAGGCAGATAAA
GCCACAGGAAAATCGAAGAGTTCATTCTACAAAGACCGCATGTATTTTCT
GGACGAAGGAGACCACAGAGAAGCATTATCTCAAGCACAAGTCCTTCTTT
GTCACGGTTCTCTCAAAAACAAGAATGGAGGGaaaatcgaaGCGTTTCTC
TTTGATACAGTATTTCTAATCACGCGGCCCGCTTCACGAAATGGTATGGA
AATGTATCAAGTATTATCTCAGCCTCTACTCACGAATGACATGGAATATG
CCAATGTCAGTGATGGTGAACTCAGGCTAGGTGGTTCATTTCGATCCAGT
CTAACGAAGGGGCCGACAGCTAAATTTGCATTTCGTGTGAATCCAAAAGA
ATTAACACGAGGTAAATCCATTATATTGCAAGCTAACGACCAACATGACA
AAAAACAATGGTTGAACGCTCTAAGCAAAGTAGCCTCAATGCCAAGCAAA
GGTGATCCAAGCTAGATGAGTAGAGTTGAGAACAGGTGGTGAAATGTGAG
GGATGTCTTCGACAAGACAGTGATGATCTGCTCGATCAATTCGAGCGAAT
GGCACCCTAAAGGATGCGATCGATATCGATTCGTCGACACTGATGAAAAT
AGACGTCTAACGTCAAGTTAATTGCAACTTTGTTCGGGTTCGGGCTTGCT
GTCGTACCAATGTAaccgattaaattaaaaagacaattttttttagaaaa
ccgttttttagaaaaccgttaaaaaatgttttaaaaacttggaaaataat
ttttgataccAATGCATAAAATGgacaatttttttatatgatGACACGTA
CTCGTATGCTTgtatttatgttgttttttttttcgttcagtgTGTTGTGT
GATTGAGATGAAGACAATTTTTATCCTGTTTGTCTTTCGCAAGGACTCGC
CTATCGGATATATCATAAAACCTGTGTGGTTTTGTAGAGTTCTATTTCGC
ACTTTATGTCGGCTGTTGAAAGatcataagaaaaatatttgacgacaACC
TATACATCATCCGTTTTTCGATTCTCGCCCTCCCTTGGGTTTGTTATGAT
GTATCAAAGTTCGACCTCTCAAAATAAAGCTTTTCTTTCaccttttattt
ttgtattcgtaatttttgttaatatttttcccGAATTTTTTCATTACTGT
ATTTGTTTAAAATTGTCAGAGAatatttttgtactttttttccTTCTATT
GAAAGAAAATACACTATCCAGAATACAAA
Run BLAST on NCBI

transcript from alignment at sc0000007:439248..450714-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001118 ID=TCONS_00001118|Name=TCONS_00001118|organism=Clytia hemisphaerica|type=transcript|length=11467bp|location=Sequence derived from alignment at sc0000007:439248..450714- (Clytia hemisphaerica)
TGTTGTATCCATATTCCTTACTCTATGCAGCACCTTATCCAAACTTTCAG
AAGCGAACTTTACAATGGATGGCGGTAAGCAAAGGGCATTTTAGAAGGTT
TTATTTTCAAAGCATCTATATGTCTCATAGTAAAAAAGGGCCCGATTTTG
AATACCTTATCGGGGAAAAAATGTCGGGGAAAGTGACGAAAATTTTGAGG
GGGTGACGAAACTTTTCCCCGATATTTTATCACCCGACCAAAGCTTTTAC
TCGATTTTTTTCCCCCAACCAAAATTCAAATCAACTTTTGTACGCCTTTA
TTAACCGAAATTAATGCTTTAAACGTCGAATTAGAAGACCTATTTTCGAG
CTAGTGAAGGAAACCATTTCATTTGGACAATTTAGTCGGGTGGAAGTGAC
GAAAATGCCTCTAGGTGACGAAATTTTTCCCCGACGAAAAAAAAACCCGA
CAAAATAAAACTCCGACATTTTTTCCCTGATAAGATAATGCTCGTAAAAA
GTATTCCCAAATTTAGGGGTACCTGATATGTTTGGGGATACCTGATATGT
TTGGGGATACCTGTAATTTCATAATTAGGGACGGGGCCTGTTATTTTTTT
ATGAAATATTTTTCTTGACTGACCCTATTTCTCATTTTTCAAGACTGTTT
TTATAACCTAGTTTGGTCCAGTTTGGTCAGCTATATTTTTCGTAAAAAAA
TATATTTTTCCACCTTCTCATTAATGCTGATAAAGTGGCAACAAGAGTGC
TAGACAATTGGTTTGGTTTAATACTTCAGTGATGTTAATTTAAAATTTTA
ACTTTGATCACGATATTTAAACATGGGTCCTTCACTATTTTGCCAAGAAA
AAGTTAGCCAACCTAAACATTAAGGGCAATGTCAATTTATCAGAATATTC
AGTACTCAAGCTAGGGCAGATATTAAATGCTGCAAATAATCATGAACATT
TGCATGGTTGTGTGAAATTCTTGCCTGATTGATGACGTGGGCCTTCAACA
TGCCCCCATGCCAACATGATTTTGGGATTGATCCAAAAACTGGTCCGAGC
TTGCTCTGAACATGCGCTTGGGTCGTCTTAAAACCGGGGGGATTTCATGA
ATGGCAAAAGAGCACAAAAATCCTTTATTATTATTTCTAATGTTTTATAA
TAAAAAATGGGGTAACTCAAAGTCTGGGGGCTACTAAAGAATTCTAAAAG
ATTTTGGGGGTACCAAAATATTAGGGATAACTAAATTTTTTGGGGGGTAC
CTGAACCCTTGAAGACCCTATGCCAGGCTCTAAATAGATGGATAAAACTC
ACCTTAAGAAACAGGAAACTTCCAGCCATTCAATAAACTATGAACCAGCT
TCTAATAGAGATCAGTCTAACTGAAGAAAATGAAGAGAGAAAATACCTTA
AGAAGGTCTGGCATTCCAGGTTTGGATTCATTGAATTCATACCACTGTAA
TGCAAACTATCCAGGACGCCATGAACAAAATAACTGTTATTAGATAACGA
TAACAATCGTTTATTTTCTTTTTTGCTGTAGCGATCAACTAGCCTCAGGC
TTCCACGCAACCAGACCGCAGCCAACAACGTTTTCTACCAATCACAACGC
AAGCAAAGAAAGACATCCTGTGTAACACCTGCGAGGAGGAGAGGCTCCAA
GGTATGTAGTCCTGGTATTGTTATTGTGTTCCTGGTTTCTCAACATTCTA
GTAAACTAAAGACAATGTACTATTTAAGGCACAGAAATGCTTGACGAAAA
TATAGCTAACTTCGAAACCTGGGGCGGAATCGTTCAATATTTGATTATTC
TTATTATATTACGAACATAAATTATTAGGGTCTCAAAATTAGACCCTTAC
GGTTGAGAAAATCTAGCTAAATTTGAGCAGATTTCAGCAAATTGGTGCAA
AAAATTTGAACATTTTGTCCATTTTTGTACGGTGGTGAAATGACCTATTT
TGCTTGAACCTTAACAAGTATTTTTATTATATGGTCCCTTGGGATTTCAA
ACCCAGTTTTTGCCTACTTGGCAAAGCTGGGGAAAATTTTCTAGACTCTT
ATAAACAGTTATAAAGTCAACTTTTGAAGATCCTCATTGACAAAAACTAA
TTGTACCATCTGATAGAGCTTGGATAGCAGATCTCCAAAAAGGAGATTTC
ATTTGTTTCATTTTGTTTCGACTAAGTCCCCCGAAAATGGATGATACGTC
TCTTCAGAAATGCAAATTTTTATGTCAGTATTTTTGAGAAAACTTTGACG
AAAAAAATTACTTTCAGCAGACGAATCTCGAAAAGTACTTTCGATTATAG
GTATAGTTTAAAGGGTTTCCATGGTTAGATCTTGAGATATTTGAGTTTGA
AATTTTGCTAATTCAGCGTTTTTCCAGGTTTTTCAGCATTTTTTTTGCAT
AGTAATTTTCCTCTTTTGACAAGAAAACTGTCATTTCTGAGATGAAATAG
GAGAGAGCTGTCATGGTCTGAGGAGCCCTCCTTGTCTTTCAGTACCCACC
CCCTAAAATCGGCTCCTGTAACCATGTTACTGGTCTTATCCCCGTTTGTG
TTGACTTAGCTCTTGGTTTTTATAGAATAGTCTGATCAACCATTTTATTC
TCCCATTTTAGCTTTGGGTTGATTCGTTCGAATATGACGAGAGTGATGGA
TGGACTCCTCAACAAATCAAGCGACAAGAGGTATATATTGTTTGCTTTCT
TTATATGTTGATGCTTATTTGCTTCTTTAAAATTTGGAAGGGGAGCTATT
CCTCGCGATCCATTATTTAAACTGCACCAATCAGGATCAACTAAAAATTT
CTTGGCACAACTAAACGTTACTCGCAAAACCACACGAACTTTCGTGCAAA
ATAGTGTATTGTTGCCATTACATCTGAGGAGATGTGAAAATTAGAGGCTT
AGCACAAATGGGTACATTTTAAACGAATGTGGCAATAAATTGCACTTAAT
CGTGGTGCCCCTTGGCTAGACAATTCTCAAAATTTTCAAAATTAAATCGT
AATATTCGACATTTCCACAAATTTTATTCGTGAATCCCAAAGGAATAACC
CGAAGTATTGTGGTAAGGTGCAGCCTTCGGCTGATAATTTTGATGATTAA
TTTACAAATATAAAGGAATTCATCTAATAATTACAAAACCTTCACTTATA
AAACCTAACTCTTCATTGAAGATTGAAAACTCAGCCTTCAACCGCTTCAG
AGTTCGATCGGAAAATATTTGAACTCGATATCCTGTTCTTTTGCAGGCAA
TCTACGAATTATATTGCGGAGAAACAGACATGGTGGAAGACTTGAAACTG
CTACAAGAGGTATAGGTTTTAAATAAATGATTTCTCTTCCCAAAAAGAAT
TTATACGAGAAAATATGCTTCTCTCGTAGAAAGTATCGGACAAATTTCAA
CAAATAAATGTTTTAGTTGTCCCTTGAAACTACGGGATAACACCTTTTTA
TTCAAGCTGATTCTAGCGTCTGAAACAATTAGTGTCTTTGAATAACTGAT
GTTGGGATATCGTATTGTGTTATGAACGAAGTAAAGGTCGCATTCCGAAT
TAGCAGGGATTGTTTCTGATGACAGTTCATCTTGTTCGGTGAAGCTGAAA
AACTGGAATACGGGAGTCTATAAGATTTTCTTCTTCTTAAAATAGCATGA
ATAGAATGGAATTTCCGTAAAAAAGATCATTTGATTAAATTCGGATGATT
CAATTTAAAACTCGCCATTATTTCGCTAGTCTTGGAAATTCTTAAGATTT
TGATTCTTTCTAAGTCATTGATGTTCTTGGTGATCTCGTACCTTCTTGTA
CCCTTCCTGGTGTGAACAGGGCCTTAATAGATTCACGGAAACTTTTCATC
AGAGCTATGAAGATGTATGGGTTGACAGCACTGTTCGAAACAGACAACAA
ATATCGTGTGTGGTATAAATCGTACTTTAACTTGCAACTACATTGCTTGC
AGTAATACATAACGTTCAAGAAAGCGAGTCCCGGAATATAAGAGATCATA
AACACAGCTAGAATAATGAAAAATACGCGCGTTACTCTCTTTTCCTTGAT
GTAACGCTGAGCGATTGTTTTACGGTTTGCTGTCAAGGAATCTTCCAAGC
GCTTCTTGAACTCTTCTTCGTTGCTTTTCATGAAGCGATGGACTCCGAAA
TACACAAAGGCTATAACAAAAAATCCAATCGCGATTGCACCATAATAAAA
ACCAGCAAAGCCATATCTACGGTTGCCGATGAACGTTACCAAGCAACCGA
CACCGATGGACAAGACCCAAATAATGATGGATATGACAATACAACGAACC
CAGGATAGCTTGATTCGATATTTCAATGGATGTGTGATTCCCACATAACG
ATCAATTGCTAACGCGCATGTGCTGAGAATCACACTAGCCGCTGATGTTA
TGGTAGTGCTTTCTTCCAACGGGCTAAAAGTGATATTCAAACCTTTGAGG
GAAGTGTACATGTAGTAAGCGGTTAGAGGCATGGGCACGGCACCTGCGAT
GAAGTCACATACTGATAGGTTGACCAAGAAATAATTAAAGGGCGTGTGAA
GCTTTTTCAAAGGATCGCATACCACTACAAGAATGATGAGAAAGTTGCCA
ACGATTGCCAGCACTGATAATGCGATGAATGAAATGAAAAGTGCGATCGC
TGCGTCTGAACCTGTGTCTGCATTTGAACAGTCGCTTGTCATGGTATGGT
ATACTTCAGAGGTTTTTAGCGAACTGGAAGAAATTCTCACTTTCTTCTCT
TGTGATATGCATATTTTTTTAACTTTCTTAAAATCGTGTCATGGTATGGG
CTGTTTGTGTTTTTTCAGATCTCATGATGCTAGTCAGTGTTTATTTAAGG
ATTTTTTGACAGCATGATGTAACTTGACAACAAGCGTGTCCTATGAAGAG
GCAATTCTGAATGAAAACCGCATTCAGCGAAATTCCTGGATATCTCGAAG
TTAGGAGAAGCCACTCGGTTGTTTGGGCGTATGGTTGACAGGACCTGACA
ATTGTGGCAAACCTCTTGTCAGAAAAATGAAATATCATTGAAACGGTGAT
TTACCGAACAATGAATGATGAGATTTTTCTTTCTATGAAAGAAAACCCTA
ACGATCTGCATCGTGCAATTAAAAAACTGTCTGGTTTAGTCCACCACAAG
TTATTATTTAAAGGGGTACTTAATTTAGATGACGTCATTTGATCATTTTA
TATCTTGTAAACATTTTAATATTTTAATTCATGTAACGTTTTCCCCGGCG
TCCCTGGTGTTTAATTTTATCGGCAGTGAGAGGGAGGGTGGTGCTAGGTT
TTAACACTTTGATATGACGAGTACTTTCGTGTTCTAGGTTTTTCGGGTTT
ATTCCATTCAAATATAACGATACAATATTTTTTTGTTTAGGTTTACTTCA
ATCCGGTGGCCAAATTAAAACTTTTGACGGAAGAAGACCTCGCCTCCATC
TTCGGAAATATTCAAGTTTTGCTACCGTTACACGAGGGTAAGACTCTTTT
AATTTTTCAGCTTACAAACTCTTTAAAACGTAATTTTGCTTTCGCAGGTT
GCTCGAGGTCGTATTTGAGGAGTTTTACCAACATAGCGGTCTCTACCACG
TGATTGCATGTCGGATCTTTGTGAGCAGTTTGCCTCCATTCTATGATTAT
TCATCTGTTGAATTCTTCAACATCATTTGCAGTTCTTTTCATTGCTTCTT
TTCGACTTCTTTTTGTCGGTGACAATGATGTCAAAGTGATCAAGTCTTGT
TGTATGCTTTACTTTCATTCAAACTTGCTCCGTAGTCACAGAGCTTTCCA
ATGAATCGATTACGTTTTTGTTTTTGCTGTGTCATCGTCAAAATAATCAA
ACAGAGAAACCAAAAAGAATCTGAAAAAGAGTCTTTCCCACCGCGTCCGC
AAAGATGAACAGTTTTGGTAAACTGATTCCATTTTAAGAACACTAAATAG
TTCAAACTTAATGTTAATATATCAAGACATTTACTTTTGTACTGACACAC
TGAGTCTATGTATGCGTTCCCCAAATAATTGGAATGTTCAAACGTGTTCG
CCCTTCGTCTCTGTCTTGTTCTATAGAAATAGATTCTCTTGTTAATCGCC
AGCTTGTAACAGTGAGGCTTTTTGTAGCCTGTAATACGATACACTTATGT
CACGCAGTCGTGGTGGTGAGCCGACTGAAAAAAGAACTTTCTCAATCTTT
ACTCCAAATGTTTTAAGCTTAATAGGGTGAAATATGTAAACATGTAACGA
GTGACGAGTTCATCTCAACCCGAGAGCTTTTTCTTTTCGCTCGCTATGGG
TCGTTTATTCATCATTCGCTGTCCCTCTTTTCGGTTTTCTTTCAATAATA
TTCTCGCATACATAAGCTCTTATGAAAGTGTCAAAAATAACTTTATCAGA
TTCCACACATATCACCACCACTCAGCATTTCAACCGCGGTTCCTTGACCA
CTATCATTCCTATCTTTTCATCAAAATATCATGTTTATTTATTTGGGTGT
TTACCATTTTGATCACAAAGATCCATGCATTTTTCTCTAGTGTATCATGA
ATTAAACGTATCATAAAGTCTCTCTCTTTGAAATGAGTCATTTTTGCTGC
TTTTTGACGAAATGTTTTCATAATATGGTCAAAGAAAACAAGAAATGCAA
AACCAACACCTTGCACTCACCGCCGTCACTTTCAAAGTCAACAAATACTC
ACAAGTCACAACGACGACCCTTTGACGTCATCGTTCAGCCTCAATGCCAA
ACATAGCAACAAATATCCAAACTCTATCTAATGCAAGCATCATCTTTTGG
CATTTGCCCAAATATCTCTATTCGTCATACTCCAATTTAGATACTTGATA
AGTTTTTTTGGATAAAAATCTTTATAATTCTACCTAACATGTCTTTCCTT
TCTTATCCACTGTTATTGACAATTTCGTCAAGAATTCTTCACTCTGTATT
GTTATAGATTTGGTGAAACGTTTGGAAGAAGTACGGACGGAGAACGGAAG
CATCGAAGAGATCGGACGAATTTTGACGGAATGGATTCCCACGTTGCGCC
CTTACATTCCGTATTGCGCCAATCAACTACAAATGAAAAACATGCTCCTC
CACAAGACCAAAGAAAATAAACACTTTTCAGATTTCTTACAAGTAAGCAT
GACCTTTTTTCCTTCATTTTTCTTCTCCCGTTTTTTTTCTTCTTTCTTTT
CTCCCANCTTTTTCCTTCATTTTTTCTTCTCCCGTTTTTTTTCTTCTTTC
TTTTCTCCCAAAACTTTGACGACGACCTCAAATTGTGTATTTATTTCAAA
ACCTGACCTTTTACGACATCAAGTATGAAAAAACGTGCGGTTGATTCGTA
TTGTATAAGGTGTGGTTATTCAATAGACGTGGTTTTGAAGGATAGCAAAT
AGAGATGGTTAGTGATAAGATAAGGGATAGGTAATCATATCTTGGTAGAC
CCTGATTAACAAATCATTCGTTGAAAATGTGATGTTAAGCGCCAACGGAT
TATCGTACAATTGAATCAACAAGCCAACGTCTCTTTTGATAATCCTATCT
TTCCAACTGAATAAGCTTTATCAAAATGACTATTAGACTCATCTATGCTC
CTATCATTACCCTAATCACCAGTTTTTCCTTCCCTTTCTTCATAGAGATG
TTTGGAATCGCCATTCAGCCGTAAACTAGACCTTTGGTCTTTCTTAGGTA
ATCATTATATTACTCAAACCCACCTTTCGCCCAATCATCAAACAAATTTA
CACGCTTTTTTTTTATAAGAATGGTGTTTTTTCATTTCATCATGGATATT
CTTAACTTTTTGACGAAAATCATCCAAAAATATTCTTACGGTATTCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATT
CCATGATGGTGATATTCTTACCATATTCTTAATTTTTTGGCCATTTTCAT
CATGGACATTCTTATAAAGTGTATTCTTATAAAAAAAAAAGCGTGTACTG
TCTTTGCACTAGCCTTTTCATTGTAATTTGCTAAGTACTCATTTGACCTG
TCTTCCTTTGCTTGACTTTCACGTTTCATAATCTCTCTTCTCTCCTTTGT
ATTCATCAGATTCACCTAGAAGCAAACTGGTGAAATATCCGCTACTTATC
TCCAACATGCATAAATATGTAAGCTTTTTGTCACTTTTTCTTTCTTTACG
CTTATGGGAGATGACGCATCGTAAAATGACATGTATATGTCTGATGTGTT
TAGTGCCCAAGTGTCAATCCTCTTAACAATGCAAAAAGTGCTTTTCATCA
TTACTTTTTAAACCTTCTTTTGTTTTGGTTTTGTTTGTAGACGCCGAAAG
AACATCCAGATAATATCATCTTATACCAAGCAGTAAGTGATGTTTTGTCT
AACAAATCATACATTTTACTACCCTGTCTCCCCTCTGATAACAGCTGTTT
ATTTGTCCCTTTTTTGAAGCTGTAAAATTGATGTGTTTTTTGGTGATGTA
TCCTTTCACTATCACATCATCAGTCTGTCATAGTGTAAATATGATGACAT
GTGGAGTCCTTTATTGATAATAAACGGGAATCTCAGGGGTTTCCACCGAT
TGAGCGTTTTCTCTACATTTCCTTCTTGTTTTCTTTGCGCTGACTAAATT
GGAAAAATAACGGCTCATAGTTTTGATATTCTAAATCTCTGACAAGAATC
TCAATTATGTTGAAGTTCTATAAATAAGTTAAGACACCCCTTCTTCTCTT
ATATTTGGTTCGATTAAGGAGATTATTTCAAATTTTTTTCTTCGTCAGAT
TCAAGAATTGGAGGTTATAATAAAAGAGGCAGATAAAGCCACAGGAAAAT
CGAAGGTAAAGTTCCTCTTTATCTCTCACTGACCCTTGTAAACAACTCAA
ACTACTTGAACCATGTGATTAAAACTCTCCACCGTTTCTTACTTTTAGAG
TTCATTCTACAAAGACCGCATGTATTTTCTGGACGAAGGAGACCACAGAG
AAGCATTATCTCAAGCACAAGTCCTTCTTTGTCACGGTTCTCTCAAAAAC
AAGAATGGAGGGGTGAGTGGTTAATCCTCGTCCCTGACAACCTCTCTGTA
ATAAGTCAGATTTTTCAATCGATCTCTTGCTGTCCATGATGACTTATCAC
GCGTTATCAATTAGCTAATTAAGATATATCGAACACAAAATGAGAGCTAA
TTCTGAACCAATATATTTCTTTTTTCAGAAAATCGAAGCGTTTCTCTTTG
ATACAGTATTTCTAATCACGCGGCCCGCTTCACGAAATGGTATGGAAATG
TATCAAGTATTATCTCAGGTAATTTAGCATTCTCTTTACACGCTTGATTT
GCGATGTATTAGCACGAGATGATTGAATGGCGCCATCGCTTGTTTACTAG
CCTGCACCAGTCCTTTATAAACATGTTTAGCCCCCAAACTGTGCATTCTT
TACAAGAGAATTTGATTGTAATGAGAATGATTGAGAAGCATCTCTTTGAA
TGAACTGCTTGTACGCCAGTGAGAGATAAAAATCACCCATCTTTCTTTCA
CATTCTTGATGGTCTTTATGAAGAGAAATAAAGGTTATAATACTCTTCGA
AGTTCATTCATGATTAACATTTATTTTCGTTGAAAAGCTCACCCTTAATC
TTTTTGAGCTCGGTAAGAAAGAAGTTGATTCGACTGAAAATGTTATTCAT
TTCTAAGACGTCTTAGCTTGCTCTATACTAGCATCATTGTCCAGTGGCAC
GGTCTATTCAATCAAAATTCAAACCCTCTTTTGAGAAGCTAATAATTTGT
TAAGCTTGTTAAATCTCTCTATGATGCCTTCACCCAAAATAATTCAAGCT
TGTAATTTTGTACACAATCAAATTTGATGAAATTACTTGCTTTAAAAACT
CAATTAACAACTCCACTTAATTTAACAAAATTTTGAGCAGCTGGCTCGAA
AACCTTTTTGTCAATTATATCCTAAATGCATTCCTTTTTTCTTTGATCAC
TTTAGCCTCTACTCACGAATGACATGGAATATGCCAATGTCAGTGATGGT
GAACTCAGGCTAGGTGGTTCATTTCGATCCAGTCTAACGAAGGGGCCGAC
AGGTAAGAAATGAAGTGCGGTTTTTGATGCCTTCTACCGGAAACTGTAAC
GGTCTTCTCAATATTTCCGGCGTATTTTTGTATTTTTGTTGTTTGATTGA
CATTCGAAAACAAACGTCGTTACAGTGTTGAAAGTTGAGGAGAAAATAAT
TATGAGATTAAAGTCGATCATTAATTCCTTGCAATCTTCTACTCTAAGCA
TCGATTTAACGAAGGAAAAGGGGATTGATCTTGTGAAAGATAATATATTT
GCACTGCACTGATGTTGTTGGAAGGTTCAATCATTATTGACTCTTACTCT
GTTTCAGCTAAATTTGCATTTCGTGTGAATCCAAAAGAATTAACACGAGG
TAAATCCATTATATTGCAAGCTAACGACCAACATGACAAAAAACAATGGT
TGAACGCTCTAAGCAAAGTAGCCTCAATGCCAAGCAAAGGTGATCCAAGC
TAGATGAGTAGAGTTGAGAACAGGTGGTGAAATGTGAGGGATGTCTTCGA
CAAGACAGTGATGATCTGCTCGATCAATTCGAGCGAATGGCACCCTAAAG
GATGCGATCGATATCGATTCGTCGACACTGATGAAAATAGACGTCTAACG
TCAAGTTAATTGCAACTTTGTTCGGGTTCGGGCTTGCTGTCGTACCAATG
TAACCGATTAAATTAAAAAGACAATTTTTTTTAGAAAACCGTTTTTTAGA
AAACCGTTAAAAAATGTTTTAAAAACTTGGAAAATAATTTTTGATACCAA
TGCATAAAATGGACAATTTTTTTATATGATGACACGTACTCGTATGCTTG
TATTTATGTTGTTTTTTTTTTCGTTCAGTGTGTTGTGTGATTGAGATGAA
GACAATTTTTATCCTGTTTGTCTTTCGCAAGGACTCGCCTATCGGATATA
TCATAAAACCTGTGTGGTTTTGTAGAGTTCTATTTCGCACTTTATGTCGG
CTGTTGAAAGATCATAAGAAAAATATTTGACGACAACCTATACATCATCC
GTTTTTCGATTCTCGCCCTCCCTTGGGTTTGTTATGATGTATCAAAGTTC
GACCTCTCAAAATAAAGCTTTTCTTTCACCTTTTATTTTTGTATTCGTAA
TTTTTGTTAATATTTTTCCCGAATTTTTTCATTACTGTATTTGTTTAAAA
TTGTCAGAGAATATTTTTGTACTTTTTTTCCTTCTATTGAAAGAAAATAC
ACTATCCAGAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000629XLOC_000629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001118-exon-sc0000007-1575043694:450641..450714TCONS_00001118-exon-sc0000007-1575043694:450641..450714Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:449064..449183TCONS_00001118-exon-sc0000007-1575043694:449064..449183Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:448035..448103TCONS_00001118-exon-sc0000007-1575043694:448035..448103Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:447406..447468TCONS_00001118-exon-sc0000007-1575043694:447406..447468Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:445228..445324TCONS_00001118-exon-sc0000007-1575043694:445228..445324Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:443573..443757TCONS_00001118-exon-sc0000007-1575043694:443573..443757Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:443018..443069TCONS_00001118-exon-sc0000007-1575043694:443018..443069Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:442397..442455TCONS_00001118-exon-sc0000007-1575043694:442397..442455Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:442183..442224TCONS_00001118-exon-sc0000007-1575043694:442183..442224Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:441710..441766TCONS_00001118-exon-sc0000007-1575043694:441710..441766Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:441503..441616TCONS_00001118-exon-sc0000007-1575043694:441503..441616Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:441247..441336TCONS_00001118-exon-sc0000007-1575043694:441247..441336Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:440463..440559TCONS_00001118-exon-sc0000007-1575043694:440463..440559Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1575043694:439248..440157TCONS_00001118-exon-sc0000007-1575043694:439248..440157Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:450641..450714TCONS_00001118-exon-sc0000007-1510915933:450641..450714Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:449064..449183TCONS_00001118-exon-sc0000007-1510915933:449064..449183Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:448035..448103TCONS_00001118-exon-sc0000007-1510915933:448035..448103Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:447406..447468TCONS_00001118-exon-sc0000007-1510915933:447406..447468Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:445228..445324TCONS_00001118-exon-sc0000007-1510915933:445228..445324Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:443573..443757TCONS_00001118-exon-sc0000007-1510915933:443573..443757Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:443018..443069TCONS_00001118-exon-sc0000007-1510915933:443018..443069Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:442397..442455TCONS_00001118-exon-sc0000007-1510915933:442397..442455Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:442183..442224TCONS_00001118-exon-sc0000007-1510915933:442183..442224Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:441710..441766TCONS_00001118-exon-sc0000007-1510915933:441710..441766Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:441503..441616TCONS_00001118-exon-sc0000007-1510915933:441503..441616Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:441247..441336TCONS_00001118-exon-sc0000007-1510915933:441247..441336Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:440463..440559TCONS_00001118-exon-sc0000007-1510915933:440463..440559Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1510915933:439248..440157TCONS_00001118-exon-sc0000007-1510915933:439248..440157Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:450641..450714TCONS_00001118-exon-sc0000007-1491911889:450641..450714Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:449064..449183TCONS_00001118-exon-sc0000007-1491911889:449064..449183Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:448035..448103TCONS_00001118-exon-sc0000007-1491911889:448035..448103Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:447406..447468TCONS_00001118-exon-sc0000007-1491911889:447406..447468Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:445228..445324TCONS_00001118-exon-sc0000007-1491911889:445228..445324Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:443573..443757TCONS_00001118-exon-sc0000007-1491911889:443573..443757Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:443018..443069TCONS_00001118-exon-sc0000007-1491911889:443018..443069Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:442397..442455TCONS_00001118-exon-sc0000007-1491911889:442397..442455Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:442183..442224TCONS_00001118-exon-sc0000007-1491911889:442183..442224Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:441710..441766TCONS_00001118-exon-sc0000007-1491911889:441710..441766Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:441503..441616TCONS_00001118-exon-sc0000007-1491911889:441503..441616Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:441247..441336TCONS_00001118-exon-sc0000007-1491911889:441247..441336Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:440463..440559TCONS_00001118-exon-sc0000007-1491911889:440463..440559Clytia hemisphaericaexon
TCONS_00001118-exon-sc0000007-1491911889:439248..440157TCONS_00001118-exon-sc0000007-1491911889:439248..440157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:439248..450714 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.5647e-06	0.0809562	2.41821e-07	4.89278e-07	5.69271	0.00292085	0.241876	0.177334	9.73839e-07	7.09799	2.10434	3.41176	0.000711901	2.53527	0.00237585	0	0.000749264	1.24347e-05	5.48837e-07	0.00749487	0.000675119	0.0491115	0.0022276	1.88978e-05	3.60766	0.00621402	3.05174	0.000383519	3.68966e-07	0.00878905
Blast
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BLAST of TCONS_00001118 vs. Swiss-Prot (Human)
Match: ARHG8 (Neuroepithelial cell-transforming gene 1 protein OS=Homo sapiens GN=NET1 PE=1 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 5.890e-106
Identity = 162/376 (43.09%), Postives = 245/376 (65.16%), Query Frame = 3 
Query:  135 SQRKQRKTSCVTPARRRGSKLWVDSFEYDESDGWTPQQIKRQEAIYELYCGETDMVEDLKLLQEVYFNPVAKLKLLTEEDLASIFGNIQVLLPLHEDLVKRLEEVRTENGSIEEIGRILTEWIPTLRPYIPYCANQLQMKNMLLHKTKENKHFSDFLQRCLESPFSRKLDLWSFLDSPRSKLVKYPLLISNMHKYTPKEHPDNIILYQAIQELEVIIKEADKATGKSKSSFYKDRMYFLDEGDHREALSQAQVLLCHGSLKNKNGGKIEAFLFDTVFLITRPASRNGMEMYQVLSQPLLTNDMEYANVSDGELRLGGSFRSSLTKGPTAKFAFRVNPKELTRGKSIILQANDQHDKKQWLNAL-SKVASMPSKGDP 1259
            +Q+   +++  TPA+RR S LW +  +    +  T ++I+RQEAIYE+  GE D++EDLKL ++ Y +P+ KL +++EE+L  IFG++   +PLHEDL+ R+ E    +G++E+IG IL  W+P L  Y  YC+NQL  K  LL + K++    DFLQRCLESPFSRKLDLWSFLD PRS+LVKYPLL+  + K+TPKEHPD  +L  AI  ++ ++ + +   G+S+  +Y D++ +LDE      +  ++VLLCHG L++K+G K+  FLF  + ++TRP +RN    YQV  QP+   ++   ++ DG++R+GGSFR + +    AK  FR+   + +  +S  LQAND   K+QW N + + +A   S G P
Sbjct:  135 AQKFSSRSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAK-ALLDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPIPVQELVLEDLQDGDVRMGGSFRGAFSNSEKAKNIFRIRFHDPSPAQSHTLQANDVFHKQQWFNCIRAAIAPFQSAGSP 509
The following BLAST results are available for this feature:
BLAST of TCONS_00001118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHG85.890e-10643.09Neuroepithelial cell-transforming gene 1 protein O... [more]
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