Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001105 ID=TCONS_00001105|Name=TCONS_00001105|organism=Clytia hemisphaerica|type=transcript|length=331bp
CCGCGCGGGATCGAACAGTGTTCGCGCGCACGTCAAAATGGCCGACCAAA
TTTCTgaaactttttctgaaaatttgtgAAGAAACAACGAGAAAGCTTTT
GTTTTTGAGAAGATTCTATTATCATTCGGATACGACCGGCTGATGTTATT
CCGTAAAGTGCATCATAACCGGCAGCGATATCATACAATTTCAATCCATC
AATCTGCTCCCAACCTGTACCGGACATTTGTACGACGGAACACATTATAA
TAATCTTGATCTAAAGCCCAAACATTACCACCAAAACCTGCGGAAATCTT
ACGGAATTTACCATTAATCCAGGTAGCTGTT Run BLAST on NCBI transcript from alignment at sc0000007:271794..275762- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001105 ID=TCONS_00001105|Name=TCONS_00001105|organism=Clytia hemisphaerica|type=transcript|length=3969bp|location=Sequence derived from alignment at sc0000007:271794..275762- (Clytia hemisphaerica)
CCGCGCGGGATCGAACAGTGTTCGCGCGCACGTCAAAATGGCCGACCAAA
TTTCTGAAACTTTTTCTGAAAATTTGTGAAGAAACAACGAGAAAGCTTTT
GTTTTTGAGAAGATTCTATTATCATTCGGTATGTATAAGTAATTGTAAGT
CATGAGTTTCAACAAGCTAGCTATATATACCAGTCGGTCGTAATTGATAA
AATCGATCATCGATTTAAAGTGTGAATAGACAAGTCAAGAGAGCAGCCAC
CGGCTGGCTAGGAAGTATGAAATATCTGTTCTTGAGGTCCCTTTCTCCTG
GAAAAAACTATCTGTTCTGTATCCTAGGATATTGACTGATTTTACGACAC
TTGCAACCAATTAGCAGTGCGTCTCAAACCGCGATATTTCGAGAGCACGG
AAGCACGTCAAAACACCAGCTTTTTTAGAGTTTTGTCTCGTTTACCCAAA
CGCTGCAATCCTGCGTAGGCTTTGGGCTCAAGACTAGAACCCCCANNNNN
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NNNNNTATTGTGGAAGGGAACGCTTGAGACGAATGTTTGGGAAATCAAAA
AGACAACTTTTGTGAGAATGTTGAGTTTTGTTTATATGGCTGTTTGTGTC
GCACTGATTAGCTGTTGGTCTATGGTGCGATGTCGAAGAAGACATTGCAG
TGATGCCTAAAGAATAGCGAATTATCCAAGGTTATAAATGCACTTTCAAT
TACCTGTGAATTTCAGGATACGACCGGCTGATGTTATTCCGTAAAGTGCA
TCATAACCGGCAGCGATATCATACAATTTCAATCCATCAATCTGCTCCCA
ACCTGTACCGGACATTTGTACGACGGAACACATTATAATAATCTTGATCT
AAAGCCCAAACATTACCACCAAAACCTGCGGAAATCTTACGGAATTTACC
ATTAATCCAGGTAGCTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001105-exon-sc0000007-1575043694:275635..275762 | TCONS_00001105-exon-sc0000007-1575043694:275635..275762 | Clytia hemisphaerica | exon |
| TCONS_00001105-exon-sc0000007-1575043694:271794..271996 | TCONS_00001105-exon-sc0000007-1575043694:271794..271996 | Clytia hemisphaerica | exon |
| TCONS_00001105-exon-sc0000007-1510915933:275635..275762 | TCONS_00001105-exon-sc0000007-1510915933:275635..275762 | Clytia hemisphaerica | exon |
| TCONS_00001105-exon-sc0000007-1510915933:271794..271996 | TCONS_00001105-exon-sc0000007-1510915933:271794..271996 | Clytia hemisphaerica | exon |
| TCONS_00001105-exon-sc0000007-1491911889:275635..275762 | TCONS_00001105-exon-sc0000007-1491911889:275635..275762 | Clytia hemisphaerica | exon |
| TCONS_00001105-exon-sc0000007-1491911889:271794..271996 | TCONS_00001105-exon-sc0000007-1491911889:271794..271996 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:271794..275762 - |
Blast
The following BLAST results are available for this feature:
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