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TCONS_00001091 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001091
Unique NameTCONS_00001091
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3598

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001091 ID=TCONS_00001091|Name=TCONS_00001091|organism=Clytia hemisphaerica|type=transcript|length=3598bp
gtgaaaagtttGGATTATCAACGTCATGTTATTTATACTGAGAGTGTTGA
TACTTATAAATTCCAGTGGATGAAAACATCCTACTTaataattttttgat
attttagagATTGATATCCATGCGGAATGATGGACGCCAAAGGAATAACT
CGTCAAGTTTAAGATGGTGATGCTTCTGCTTGCCATTTGGTTTTATGGTA
TAACAGCAACAACGATACAGAATGAATTTTCATCCACTTTTACATCCATC
GAACTTGCTTCGATTTCTCCATCCGCCAGTTCGATGAAAACCAACACCCT
AAATGAACCTTCCCGAACACCACCCACTCAAAGGTATAGCTCCTCAATGA
ACATCATTGCTGAAAGACTGGAAACAAGTAACCTATCAATAGACATGACT
GTACGAACTTTTATATCAACAACTAAATTGATAATGGTACCTGACTTTTC
TACAGACATGAACGTTAAAGAATCACCAACAACATCTATAGACTTTTCAA
CATCACAACTCGTGACTGACTTACAAACTTCTATATCAAGTGATCGTCAA
ACAAACTCATCCACAGACCTTTCTATAACAGCACTGGACATGTTGTCTTC
TATGAAGACCTCACAATTTCAAACAGAGTTTTCCACGCACTTTCTTGACA
GCTCTTcgccattttcttcttcatcttctccCATTGAAAAGTCTCTTTAC
TCTTCTTCGATTGCTTTGCCGTCCTCACTTTCATCTTCCTACCTCTTATT
TTCTACCTCTGTTAGTTCCCAGTTCTCTAGCTTTTCTTCAAGCATTTCTC
CCAGTGTACCTTACAGTGTTTCTGCCAGCACCTCCTCGTCAACCATTATC
AGATCAGCTGAAGTGGAACCTTCTTCAAACATCATTTCAACTTTACGGGC
TTTCTCCACTGTTGACAGAAGCTACTCGTCATATGAAGCTTCTTCGCAAC
CATCAAACGTTGACAGTTTTTTAACATTACAAACGACCAACTTTGACGCT
TCTTCAATCTTACAACAATCAACAACATCAGAAAAGACAGCTTTAACGAC
TGAATCTGTGGTAACCTCTACCCTCCAGTTATCCTCCCAACCCTTCCATA
GAtcctttgatattttttcaagctCCCTGGAGCACACGTCAACTGTTGCT
ACAAATTATTTGGTGACGCCCAACAATCTCGCAACATCGCAGTCAGACTC
GCCAACATCCGCAAAAGCTATGACCACTGATTCAAAGAGTTCGTCTCCTA
AGAACATTCAACCAAGCACATCTACGAGAGAAATAGTCTCATTGACAACC
TCCATTATATCCCTACCACCATCAAGAAAACCCTCCACTACTCAACAACC
AACCACAACCACAACGCAACCACCTTTGCCAGCATTTAAGCAAAATATTG
ATGATACCAGTATATTTGTTTTGCTACCTTTGTCTTATCCTGTCGACAGC
TGGGAAGAGATCACTGTTTATGTCGTCATTCCTTCACTTGGTTACAAGTC
AACGGGCTCATGGTACAGAATTTTcatcaagaaagaaaaacacgACCGTT
ACCCTGCACTTGTCATGAAGCCCAAGCAACTTTCGAACGATCCACGTCGA
AAAAGAAGAAGTGCAGCCAAATTCTTGAACATCAAACTTGGCATCAGTAA
AGACTGTACTAAAGTCGATCAAGAGATTTGTAATGGTCCTCTAACTCCCT
CAACTAACTACAGTATTCAGTTGGAAGTCTTCTTCACCAATGGAACATCT
TTGACAACCCCCTCCTCAAAACCCTGGTCTACTTTACAAAAAGcGGTGAT
CGTGCCACAAGAAGGTGTTCGTTCATCTGTCGTCATCATCATCCTCACCG
TCCTTCTCGTCTTCTTCATCTTTCTCACCATCATCATCACAATCATCGTC
TGCCGTAAGAAACGATCACGAAAATATCTCAGAGGGCAGCAAGACAAGGA
CAGTATGGGTGTGTCCCTCATGTCCACCAACTATCAGAGGAATGGGGCGA
GCAGGTTGAAGAAGAAATTCTCAGGACCAGATATTCTCACTGAGcgacga
aaaagtctgaaaggAATGACGAGACCTGTCTTCATCCGAGATTTTCGTGC
ATGGGTTGAAAGAAGTGCATCGGATAGTACCTTTCGTTTTGCCGAAGAAT
TTGAGTCTATACGGGATGTCGGGAAATTTGAGAGGCATGAAGTTGCTGAC
ATGGCAGAAAATAACGGCAAAAACCGATACGTCAACGTCTTACCATACGA
TTATACGCGAGTGAAACTATCGAGTATAGACGACGAACCTGGTTCGGACT
ATATCAACGCTAATTATATTCACGGTTACAAGCAACCACGAGCATACATA
GCCACACAAGGACCCCTCCCAAGTACCACAGACCACTTCTGGCAGATGGT
CTGGGAACAAAAATCTCGAATCATTGTCATGGTTACGCAATGCAATGAGA
AGAATCGTGTAAAATGTCATCAATATTGGCCTGCATCAGGTTCGACGCGA
TACGGAGAAATCGAAGTAACGCTTAAGCACGAAACAATATATCCAGAATG
GACCGAACGGGAATTTCTAATGACATTCGAGggCGAATCTCGATTACTCA
GACATTTTCAATACACAGCATGGCCTGACCACGGCGTACCTCGCTCATCT
AAAGAAATGTTACAGTTCGTGACGACCGTTCGGTTTCATCAACGGCCCGA
TGACGGCCCTGTCATCTGTCATTGCTCgGCGGGAGTTGGGCGCACAGGAA
CTTACTTGTGTGTTGATATTCTGGTCAATAAACTACAGACCGAAAACAAT
GTAGATGTTTATGGTGTAGTGTGTTTAATGAGGACTCAACGATGCTCCAT
GGTGCAGACTGAGGACCAATACATCTTCATTCACCGAGTCATATTGGACT
ATTTGAAACAACGTGACGAAAAGCAACAAATCTTTTCCGGATATTCGACC
TTAGAAATGCGAAGGAAAAGTAAAAGTGAATCCAATCCTGTCGAACCTGC
GGCTGAAGCATTattgaaagaagaagaaaaagaagacgaGGAAGATGAAA
ATCTggataatgatgatgatgaaacgAAATCTGACGATTTTCTTTCCGAA
GAATTCGAGAACAGCGATTTAGAAACACCTCCTGTATAATACGCATACTA
CCTCTTCATATTTgtagacttttttttgactttatgtTGTGTAGAAAGAA
AATGGATGCCCTTTTATCGGGTAGGATTTCATCTTAACAAGTGATGATCA
AATATCACTCACCATGCATCTCCCTCATACTTCGttctttaaaacatttt
tattgtaatttctttttaaatggaAATTGTAAATAGGTACactagaaatt
taatttttattttgaaattttatataaaTAGCGAGAGATAATATTAGTCT
ACTTTATTGTTATATTCTTCTTGGTTTACTTTCGTTGAATTCTTTCAAGA
TACCGATTGGCATAAGAAGAAGCTTTCTTTTTTGGGGGCTAAAGAAAACA
AGATGATAATATAATAATTTTGTGTTCTTATTTATTATTGTAAATAATAT
TCTTCACATTGAAAGTGAGGTAAAGAAATAtcttaaaacaaacaaaag
Run BLAST on NCBI

transcript from alignment at sc0000007:60040..73291-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001091 ID=TCONS_00001091|Name=TCONS_00001091|organism=Clytia hemisphaerica|type=transcript|length=13252bp|location=Sequence derived from alignment at sc0000007:60040..73291- (Clytia hemisphaerica)
GTGAAAAGTTTGGATTATCAACGTCATGTTATTTATACTGAGAGTGTTGA TACTTATAAATTCCAGTGGATGAAAACATCCTACTTAATAATTTTTTGAT ATTTTAGAGATTGATATCCATGCGGAATGATGGACGCCAAAGGAATAACT CGTCAAGTTTAAGGTTGGTTGATTATCTTTGAAAAGTAGATTTGTCTGTG GTTCTTTAGAATCATTTTCTTTATGGATAATTCAATAATATTTTAGCTAC ATGCGTGACTTGATTAGTATTCATCCGCCCCTTGAGAGCTTGTTATAAAT GGATGAAAATGATAGTTAATCAAAAAATCACTATCAGACATTTTGAGTAG CAATTAGCAATTTGTGTTGAATGAAATGAGATGAGGGTCATTTAGTTCGG TAATTGCTAGTTATTCGCTTCCTATATTTGATTGGAAGTTGAGAAAAGAG ATCTGTAATGTGTGTTTCTATGAAGTTTATTTCTACTTGAGATATGATTT GGATGACTCTTTGTGAAAACGATGTATCATCATCATGATCTTTGAGAAGG TTGTCGTAATATCAAAGTAGTGTTATCCTCTTCATTACGTTTTATAGAGT TCATCTAATACTTATTAAGCGTATAATATATATTCATTTCACAAAAAGCT GTAAGTCTTATCATTCATATCGCTTTCATTTTTTATATGTTGTATGAACA GTTAAGAGAGGGGTGTCGTATACTGAACTTTTTTGGTTTTCTTTCTTAGA TGGTGATGCTTCTGCTTGCCATTTGGTTTTATGTAAGTTTTCGTTTCTTT TTCATTCTTCGCATTCTCAGAATATATTTTTGTAATTCTTCAGGAAGTCT GGATTAGTTAAAATAAAATGTCTACGTGATGGTATTCTATAGTATGTCTC GAGACACGCCCTTTTATATAAGATCCTGACCCGTGAATAGCTACTTATAT TTTGGGCAACGGGTTGGTATGATATGTGCAGCGAAAAATAGTAAAACGAT AATTGTTCCCGTTTCGTTGAACCAGGAAATTTAGAACAAGGAAATTTAAT GATCCATCACTTCTTGGAATGAATTACTGATTTTTTCGTTTCCTTCAGGG TATAACAGCAACAACGATACAGAATGAATTTTCATCCACTTTTACATCCA TCGAACTTGCTTCGATTTCTCCATCCGCCAGTTCGATGAAAACCAACACC CTAAATGAACCTTCCCGAACACCACCCACTCAAAGGTATAGCTCCTCAAT GAACATCATTGCTGAAAGACTGGAAACAAGTAACCTATCAATAGACATGA CTGTACGAACTTTTATATCAACAACTAAATTGATAATGGTACCTGACTTT TCTACAGACATGAACGTTAAAGAATCACCAACAACATCTATAGACTTTTC AACATCACAACTCGTGACTGACTTACAAACTTCTATATCAAGTGATCGTC AAACAAACTCATCCACAGACCTTTCTATAACAGCACTGGACATGTTGTCT TCTATGAAGACCTCACAATTTCAAACAGAGTTTTCCACGCACTTTCTTGA CAGCTCTTCGCCATTTTCTTCTTCATCTTCTCCCATTGAAAAGTCTCTTT ACTCTTCTTCGATTGCTTTGCCGTCCTCACTTTCATCTTCCTACCTCTTA TTTTCTACCTCTGTTAGTTCCCAGTTCTCTAGCTTTTCTTCAAGCATTTC TCCCAGTGTACCTTACAGTGTTTCTGCCAGCACCTCCTCGTCAACCATTA TCAGATCAGCTGAAGTGGAACCTTCTTCAAACATCATTTCAACTTTACGG GCTTTCTCCACTGTTGACAGAAGCTACTCGTCATATGAAGCTTCTTCGCA ACCATCAAACGTTGACAGTTTTTTAACATTACAAACGACCAACTTTGACG CTTCTTCAATCTTACAACAATCAACAACATCAGAAAAGACAGCTTTAACG ACTGAATCTGTGGTAACCTCTACCCTCCAGTTATCCTCCCAACCCTTCCA TAGATCCTTTGATATTTTTTCAAGCTCCCTGGAGCACACGTCAACTGTTG CTACAAATTATTTGGTGACGCCCAACAATCTCGCAACATCGCAGTCAGAC TCGCCAACATCCGCAAAAGCTATGACCACTGATTCAAAGAGTTCGTCTCC TAAGAACATTCAACCAAGCACATCTACGAGAGAAATAGTCTCATTGACAA CCTCCATTATATCCCTACCACCATCAAGAAAACCCTCCACTACTCAACAA CCAACCACAACCACAACGCAACCACCTTTGCCAGCATTTAAGCAAAATAT TGATGATACCAGTATATTTGTTTTGCTACCTTTGTCTTATCCTGTCGACA GCTGGGAAGAGATCACTGTTTATGTCGTCATTCCTTCACTTGGTAAGTCA CTAATTCTTTTTGTAAATTTTGAGATTTTTATTTCTTTTTGCCACATTTT CTTTCATGTATTCAATTTCGTAATTTCGTATTTAAGAAAAATTTAAGCAT GCAAAAAAGTAGTATCTACGAAAATGTAAAAGGTAACAGTCCTAGTGTCC CTACGGCTATAAAGATACATATTTTTATACAGGTTACAAGTCAACGGGCT CATGGTACAGAATTTTCATCAAGAAAGAAAAACACGACCGTTACCCTGCA CTTGTCATGAAGCCCAAGCAACTTTCGAACGATCCACGTCGAAAAAGAAG AAGTGCAGCCAAATTCTTGAACATCAAACTTGGCATCAGTAAAGACTGTA CTAAAGTCGATCAAGAGATTTGTAATGGTCCTCTAACTCCCTCAACTAAC TACAGGTTTTACTTAAGTCTGTTCCAAAAAACTCCGTACTTTACACATTG CTCTCACGGGAAAAAAATATAACTAAAAGTAATTAATACCTTTTTGAAAA GATAATTTTAGCAGCTCGATGTGAGCTTTAAAGAATTTTCTAAGGATTTG AAAATGAAGATGAAAAGTGAAAGAAAAAATGAAGATTTTTCTACTCGGTA ATATCTTTTCTGAAACAGCGCTGATTTCAAGTAAGTATTCAGTTTTTCTT TTTGGTAAAGAGTTATAGCCTCTTGTCCATTTCGATCGTTTCTAGCAATT TATGGCCTATTTTGACCTTTCTCGGAGGCTTGTGGTTTTCGATCGAAAAG TGATATAAAAGATCTTATAAAAAATCTTTCTAAGGAGGTATTACTTTTAG CTATATCTTTTCACTATATCTTTTCACCTAAAGAGGACTTTTAGACCAAA CTTTACAAGAAGTCTTTTTTTGTTGAGAAATATTGCGTAATAATTTCAAG ACTACTCCCTCTCAGGTTTTCATTTATATTTTCGTCCAATGTATGAAAGA CAACCCTCAAAGTTATATTTTCACTATTTTGAACCCACATGAAGTGGTAA AAGAAGGGAGACACACCCATCCTGAAGATCTAATTCAATTTCACAATAAG TTGTTATTGACAAATAGAGACATGGGTATGATAAATATTCTCTTTGATCA AGTGCAGATGTTTTCGAAGATGTATTAAACTTCTATTTTGTTCGTTTAGT ATTCAGTTGGAAGTCTTCTTCACCAATGGAACATCTTTGACAACCCCCTC CTCAAAACCCTGGTCTACTTTACAAAAAGGTTGGTAACTTTTTTTTTTAT TTCCTCCTTTGCTAGTTTCTTCTCCAGTAATCTCGTATTCAGATATTACC TTGTTTTGTGATTGAGCTCTCCGAGTAAATGTTTGTACAACCCGGGACGA AGATATTATTTTTCCCTGTCAACTAATGCCGTTGTCTAGGGAGGCGGTGA CTTGTTTCGTGGGAGGTTTATCACTTACAAATCTGTGTTTTGGAAGAACC AAAACAATGTACGCAAGGTTTGATATGAAGGCCTGCTCAAGATCAATAAT GAACGGCTTTATGAAACTATTTTGTTAATATCACGAGAAGCCTTCAGTTA ATTTTTGATTTTGATTTGATTTTTTTTANATGGCCAGTTCATTTTTTTTA TTTCGATTCTTGAGGAGTGTGTTCTATAAAATTTGATTTTTTTCTTCCAG CGGTGATCGTGCCACAAGAAGGTGTTCGTTCATCTGTCGTCATCATCATC CTCACCGTCCTTCTCGTCTTCTTCATCTTTCTCACCATCATCATCACAAT CATCGTCTGCCGTAAGAAACGATCACGAAAATATCTCAGGTATGTATCTT ACGTGTTTCAACCTCTTTTCGTCATTTTTTTTTAGGCCCCTCCCAAGTGT TACCAACTATTCTTCGTTAATATTTTTTTAATGAATTATGAATTTTATGA GACAGTCCTTGAAACAATCGGTGTTCTTCACTGATCTGAAAGAAAAAAGC TTCCATTAGAGTATAGCAAAAAAAGGTCCTCCGATCCTTCCTACGAGCAG TTCATTTTGTACTACAACCAGGAAATGGACTATATCCAGAATAATTTGAA TTAAACAGGGAAATTATATAACAATTAATGGACATCCTCTCCAAGGGTAG CAGTGCTTTTGCAGCTTGCCGTTACTATATTCAATTTATAGACATACAGC TAACTGTGGTATTTTGTAGCAGGTTCTCTCTTTGAAATGTAGATTTTATA TAAATTAAATGTTTATATGTCACTTCAATAAACCTTCTATCATTTGCAAA GCTATGTTTCTTGGCGTCAGTTTGTTTGCGATTTCTTAAAACGATCGATT AACCTCTATGTCCGTCTTTCATAAGTATGTTGCGATTGATGTTGGATGGA AGCAGGCACTTTGCATCTTTTTGTGACGGTCGGATGAATTAAACGCTTTC ACGGGCTGAGAAACTCTCATTGTGACGTTCACAGAGAGTGTCAAATAGGT TAAGCCTCGTCATTTGGCACAATGTCCCATCAAAAAGTTTTGATTGATTT TGCAGACGAAATTCTCCAATAAATAGCGCATGCTGGTTATGTTTTCCATC ATTTTCTTTTTAAAATATTGGATTCTGATTGCTTAATCTCATCAAAAAGA CTTCATATGGCGCTCTCTTTCCGAAAGAGAAGAAGAGGTTGAAGAAGAAG AGTTTGCTCTTTCAAAACTCCGTCCTCGCTCCTTTATAACCATTTCCAAC TATTGCTTTTGAAATAATTAAGGAGTTTTTAAAGAGTTGTATAATGGAAA AAGAAGGGCTTAAAAAGCTGAAACGAATAGTTTACGACTAGTTGCTTTTA TTTCTGCTGATTGAGAAGTAAAGAAGTCATTTTCTGGGTGAAACATGAAA GGTTGTTTAGGCTAGGCTCTTAATTCGAATATAGATTTATGGAAACTGGA ATTCCTTTCTTTCTCAAAACGGAAATGAAATTAGCATTTGTTGATGATTT GTGTTTTCGATTAACTGGATTGGATTGATTGGATGAAACCATAAATTTGA TGATATAAAACATTAACGACGATTACGTAACTCCTTTTCGCAGCTTTAAT TGCATCCGGCGTTTGATTTTAGCACAGTGACAAATTTTATGTAGTGTGCA ATATATTGGTTGGTATTATCAGTACATTTGATAAGCTGCTTCTGCTCATT AACCACCTTCAAACAATTATTCTTCCTTATTCTCTTCGTTTCGTCATTTT CCTGTTTTCGACAAAACACGTGTTTATTTTCGACCATATTATTGCGAGGA TGTTTTCGCGTGAAGCGGTGAAGAAGAAGGAGGATCAAGGGAAGATGTCC TCTGCACTTGCATTTTTTGTAGACGGGATATGTCCTTTTCATCACTTGTA CTCGGTATCTTGAATTTTGCGAATGCTTTTCAAATACTTTTTAGAGTAAT TTTTAAAGGGAGATAAAATATGCTTTTGCTGTAAAATCGGGTTTTGTTTT GTTGTTGCCTTGACAACAATCATTCCATCAAAATGGCTACGGCTTATCCC CCTTCCTGGTGCAAAAAAGCGGCGCCAATAATCCCTCTTCTATCTCTATT TAATTAATCCAACATTTTCATTACTTTTTCAAAAGAAGACTTAATTTGTC TTTTCCTTCTCACTCTTTTAATTTGTTATTTCGGGAGATGGATATTATAT GTTCTTCCTTTGCAAGCTTCAAAACATCAGCACATGATATTGCTGCTAAT GTCTTTGTTTCGCACCGGCGTAGGAAACTTACTTTTGATCAATTAAGAAA GACAATAGAATGTAAGAATTGATCTCTTAATGGCTTTGCGTCTCATCAGC CAAAATATTACTTCACTAATTGTCTAATCTTTATCACTTGATGATTTCAA CTGGCTTGTGTGTTCTTTAATAGATGTCCTTATGGAAGTTGTTTGCGGAG AGTCAACGGAGTTAGAAGTACTTTAGTAAAGTCAATGTTTACACATTATG TAATGTGGCGAGAACGTCCTTCTTTAATTTTAGCGAATGATATCATGGGA ATTTGCGACCGTTATTTTTTTGTGTGTTTTTGTGATGAGTTGTACATCAT TTTTGGTCTTTCGTGTTTAAGCGTCACTGAGGGGTAATGAAAGTTCACTT TCAGATCTTTTGATACAGAAGGGGGGAACATTCTGGTTGGGCGTTTGATT GTTTTGTTTGAGACATGGATTAAATGGGAATGGAAGGGAATTCAGCTGCT TCGTTGAGTTTTCACGTTTACACATCATCATAGAGAGACACATGCACCTT CTCATTTCATTTTCAACCTCAAAGAAAAGAAAACAGAAAGAAAGGGAATA TTTCTCAATAATTATTTCTTCTCCAACATCTTCATATATTACATCGTATT CATTTTTTCCAAAACATGTGTCTGTTTGTCTTCTCTATTTTTCTTCTTTC TTTCTTCTTCTTTCCATTTCTCGACTTGAACACTCTTCCCTCTCATCACA ACGTTCAAGTGAAAGAGTGATCTGTTTCTTTCTCGACTGAACAGCACAGC AAGACTNTGAACACTCTTCCCTCTCATCACAACACAACGTTCAAGTGAAA GAGTGATCTGTTTCTTTCTCGACTGAACAACACAGCAAGACTCTCACGAT GTGTTCCGAAGCACCCTCAAACTACCGAAGACGTCGTTTTCAAATGTGCT TCTGCTTAGTGTAAGTCTTTACTTCCCTTTTCAACCTTTTTTTCCTTTCT TTCTGTTTTCATGCAGGGCTTTAGAGGTGGTGAATTTCCTCTGTTTTCAT CGCGGAAATCTAGTTTCTTTTTCTGATTTTGAACACCCAAAAGATAATGG AGGAAGGGTGATTTCCACCATCGGTACTTTCCGACTGATGTTGTTGTGTG GGCTTCTCTTGAGTTCAGTGGGTAGTTCATCCTATGGAAAGCAATAGGAA CAAAATACAACAAGTCAATGATAGAAATTTTAATTGACTTATTCACATGG TTAGGTGAACTTTCTTTTTGTGATGAGTACTTTTATAAAAAGAGAAAGTC GAAGCTTTATTAAACTGTCTTGATCCTGTATTATAATGTTTATTTTGAAC ATGAGACAAAGAGAAGTGTATGAATCATGCGAGAAGTTAGTGACATCTCT TCAATTATAAATAACATTCTTACTTCAAAGCATTCACACCACACTTCTAT CGAAATTCATACACTGTATTTAAAACAAGTTGAATGTTGCATTCTGTAAC TTCGCAATGAAGAAGAAAATTTGCTGTTGATTTTCCTTTTATGGTGTTTG TATGTGTTGAATGATTGGTTTCTGCTTTGACGTGCTTCCATCTCTGACTG AGAATCAATGTCTCATTTCATTCAAATGACATACTTTGCACTCACACAAG TCTTCTAACTGCTTTTACTGTGTATTATATTTATTAGTTGCAAAAAATTA AAAACAAAGGGATCATTTTTGAAGATATGCGGATGTACGACTTGGTGGAC GAGAACAATGTGTTGTTTGACAAGCAAACCATCAAACGACACAATAGTCG TGAACTGAACAACAATGAACCCGCTCTTCTCCGAAGAACTGTTTCTTTTT CCAACACCATAAGGTGTAAATGTTCAAAACTCTTAACTTTAACACCCCAT CTTCACCGTAGAGGGCAGCAAGACAAGGACAGTATGGGTGTGTCCCTCAT GTCCACCAACTATCAGAGGAATGGGGCGAGCAGGTTGAAGAAGAAATTCT CAGGACCAGATATTCTCACTGAGCGACGAAAAAGTCTGAAAGGAATGACG AGGTAAGTGTTTTCTCTTTTTTCTAATTTTTAGATCATGGCCGTTTGTTT ATTTTTTCGAGTTTGAGCGAAACTGTTTTGTCTGAACGAGATATGTCACA CTCTGAAGGGTTTCCGTCAATAGTCAATAGACTGACGGGTTTTCGGGACT TTTAAAATAATGATATTTTCCAAACAATCAGCCTGCATTAACTATATATG ATGATGTCATCATTAGGTAATGTTAAAATGCATAATTTATTACCGACGGC CCGAACTGAGTGATAGGAAGATAATAAACGCAATAACAAATATAGAAATC GTTTTATCTTTACATCGAACATGCAATTTCACAAACATTCTTCTGATAAG AGAGGTAGCAAGCCATGTTTCAAGATAAGGCCTTTTGTTTCGCATTTTTA ATAAGCATTTGAACACCCCTCGACGTGATGTATCGCTTGATTAATGATAC CGTTGTAAATATAAAAGCCTGTCAAAGTGTCATTCTTCATAATATGTTGT TTTCATAATGTATTTTCGTTTGTTTGTCAGACCTGTCTTCATCCGAGATT TTCGTGCATGGGTTGAAAGAAGTGCATCGGATAGTACCTTTCGTTTTGCC GAAGAATTTGAGGTATGATGTTACCCTTTCACCACCACTTTCACAAGTTT GTGTCAAAAATGACAAACGTGAACTTTTGGAAATTAACCTTTACTTATAT CTTCCCTTTCATTAATATTTGTAATAACCAAACAAGTTGACCATTTACAC GCCATAATTTCTGTACAACATTTTTTTGGATGTTATTCAAAATGGGACGG AACGTCTAATTAATGATCATTAAGTCTTTTTAAGCCATCCTTAATATTAC ACAATTTCTTCTAATTATAACTTTCTTAATGTTTATCTTTCAGTCTATAC GGGATGTCGGGAANATGTTTCAATCTTTAAAGCATTAAAAGCTTTATAAA TCTTTAAAGCATTAAAAGCTTTATAAGTGCATGTCATGACCTTTCAGTGG GGGCATTTAGTGAAAGCTATGACTAGTTTAGATTTTAGATCATGGCCGTT TGTTTATTTTTTCGAGTTTGAGCGAAACTGTTTTGTCTGAACGAGATATG TCACATTCATTCTGAAGGGTTTCCGTCAATAGTCAATAGACTGACGGGTT TGCGGGACTTTTAAAATAATGATATTTTCCAAACAATCAGCCTGTATTAA CTATATATGATGATGTCATCATTAGGTAATGTTAAAATGCATAATTTATT ACCGACGGCCCGAAACTGAGTGATAGGAAGATAATAAACGCAATAACAAA TATAGGCATCGTTTTATCTTTACATCGAACATGCAATTTCACAAACATTC TTCTGATAAGAGAGGTAGCAAGCCATGTTTCAAGATAAGGCCTTTTGTTT CGCATTTTTAATAAGCATTTGAACACCCCTCGACGTGTGTATCGCTTGAT TAATGATACCGTTGTAAATATAAAAGCCTGTCAAAGTGTCATTCTTCATA TGCTCTTATTTTCATAATGTATTTTCGTTTGTTTGTCAGACCTGTCTTCA TCCGAGATTTTCGTGCATGGGTTGAAAGAAGTGCATCGGATAGTACCTTT CGTTTTGCCGAAGAATTTGAGGTATGATGTTACCCTTTCACCACCACTTT CACAAGTTTGTGTCAAAAATGACAAACGTGAACTTTTGGAAATTAACCTT TACTTATATCTTCCCTTTCATTAATATTTGTAATAACCAAACAAGTTGAC CATTTACACGCCATAATTTCTGTACAACATTTTTTTGGATGTTATTCAAA ATGGGACGGAACGTCTAATTAATGATCATTAAGTCTTTTTAAGCCATCCT TAATATTACACAATTTCTTCTAATTATAACTTTCTTAATGTTTATCTTTC AGTCTATACGGGATGTCGGGAAATTTGAGAGGCATGAAGTTGCTGACATG GCAGAAAATAACGGCAAAAACCGATACGTCAACGTCTTACCATGTAAGTC AAGTTTCGTTTTAGGAAAATTTTTGGCTCTGAATTGAATTTATGATTCTT TCCTTAAAGAGAGATTTTTAGAAATGTAGAAATTTTTTCTTGGTATTTCC TGTGATGTGACCACCATGCAGTCTTTATAGAATTTCTCCTTATTAATCAT CTGTATTTTGGTTTACCAGACGATTATACGCGAGTGAAACTATCGAGTAT AGACGACGAACCTGGTTCGGACTATATCAACGCTAATTATATTCACGTGA GTTGTTGTGCATTCATCAATTTTAGCTTTTTGGATTATTATTTTTTCAAG ATAATTTTTTAACTTGCCATACCGGATCTGTTTTACAGCGGAAACAAATC AGACTTTAATACGGTTAGAATTTCGTCTTTGTAGGGTTACAAGCAACCAC GAGCATACATAGCCACACAAGGACCCCTCCCAAGTACCACAGACCACTTC TGGCAGATGGTCTGGGAACAAAAATCTCGAATCATTGTCATGGTTACGCA ATGCAATGAGAAGAATCGTGTAAAATGTCATCAATATTGGCCTGCATCAG GTTCGACGCGATACGGAGAAATCGAAGTAACGCTTAAGCACGAAACAATA TATCCAGAATGGACCGAACGGGAATTTCTAATGACATTCGAGGTGAGGAA AACTTCCCACGTTTTCTTGAACAGTTGATATTGGGTTGTCTGGTTCTCAC TCTTTTAACGACGTTTATGGAGAAATATTCGTCTCCTATTAATAACATGA ATAAAAACAATATCTTTTATTATTTTAAAGGGCGAATCTCGATTACTCAG ACATTTTCAATACACAGCATGGCCTGACCACGGCGTACCTCGCTCATCTA AAGAAATGTTACAGTTCGTGACGACCGTTCGGTTTCATCAACGGCCCGAT GACGGCCCTGTCATCTGTCATTGCTCGTAAGTTCTCTCCTCTTCACTTGC AGTAAATGACGTCATTTGTTTTCTTTCGGTTTTTAGAACAGCTCGGTAAC GTAAAGGGTGAAGGGGTTGTATTTTTAGATTGGGAAATTAAACTTATTAA AAGAAGTTCTTAAAAATTTATCTTGTTCGTGCCTCCTTAACTTTTCATGC CAACCTATCTTAATTCGGAGCAATTTTCCTTAATGATAATTTCCTACACT TTTCTTGAATAGTTTCCTCATTAAATTTAATCAGAAAATTCATGACAATC GGTTAAACCAGCTTAACGCAACCCATTAGATAAATTGCACAATTTCGTGG TGGTGAATAACCAAGGGTAGCCATTCTTTCACACAACCAATATTTACTGC GACGCTGTTAAACGCTTTTTTTCGTAATTTCTACACACACCAAACCTCAA AAAACCCCTGACATACTTAACTTTATACTAGTTCTTTTACGGTCTGTAAG TGTTCAAAATCTCATTAATCAAGCCTTGTTGTAAACGATTGTAGGGACAT AAGATGCCATAACTTACTGCATCCTGTTATGACATAATATTAAGTAACAA TTAATTATTTTGTTTGTGTTTTAGGGCGGGAGTTGGGCGCACAGGAACTT ACTTGTGTGTTGATATTCTGGTCAATAAACTACAGACCGAAAACAATGTA GATGTTTATGGTGTAGTGTGTTTAATGAGGACTCAACGATGCTCCATGGT GCAGACTGAGGTAATGAAATACAGACCACATTTTTAAGCATCTTCAAAAC CTAATCTTTATTCAACATTTTTACAAACCTACTGTTTTCTAGAATTGTAC TCTATACTAAAATATAGGATTGCTTTTACTTTCAGGACCAATACATCTTC ATTCACCGAGTCATATTGGACTATTTGAAACAACGTGACGAAAAGCAACA AATCTTTTCCGGATATTCGACCTTAGAAATGCGAAGGAAAAGTAAAAGTG AATCCAATCCTGTCGAACCTGCGGCTGAAGGTACGTTTCAAGTTTGTTTT GATAAGTAATCCTCAAGAACTGTCTTCTCAGAACGCAAAAACCGTAGATC AAGAATAAACATAACGAATTCGAGAAAGAAACAAATCGTTTTTTGTTGGA ACTTGATCAGACTTGTTTCATAATTCTGTCTTCTCAGAATGTAAAAACCA TAGACCTCATCAGATTTGATATAAAAAAATCAATCAACAAATAAACAATT TTCTAAGAAATCATAACGAACTCGTGAAAGAAACAAATCATTTTTGTTGG CACTTGATCAAATTTGTTTCATAATCTGTATGTTATCATATACAATCAGG TTTTTTACTCAATTAAGTTCGCATTACAGATCGTCTGATCTTTCGGTGAA TTACCGTGACGTCATAATAGATCACGCTGGTCTTTGATGGGAATCAGTAT TAGGAAATCGCAGTTTACAAATTTATCAAGAAATTAAGAAAAGCAATTCG ATTATAAAATCTGTGATATCTTATCCCCCTGATTTCTCCATATAAATGCA ACATTGTTTGGTGAGAATTCAGCCTTTGTTCATCCCTTAATTATTTTTTC TCTCATCTTCAGCATTATTGAAAGAAGAAGAAAAAGAAGACGAGGAAGAT GAAAATCTGGATAATGATGATGATGAAACGAAATCTGACGATTTTCTTTC CGAAGAATTCGAGAACAGCGATTTAGAAACACCTCCTGTATAATACGCAT ACTACCTCTTCATATTTGTAGACTTTTTTTTGACTTTATGTTGTGTAGAA AGAAAATGGATGCCCTTTTATCGGGTAGGATTTCATCTTAACAAGTGATG ATCAAATATCACTCACCATGCATCTCCCTCATACTTCGTTCTTTAAAACA TTTTTATTGTAATTTCTTTTTAAATGGAAATTGTAAATAGGTACACTAGA AATTTAATTTTTATTTTGAAATTTTATATAAATAGCGAGAGATAATATTA GTCTACTTTATTGTTATATTCTTCTTGGTTTACTTTCGTTGAATTCTTTC AAGATACCGATTGGCATAAGAAGAAGCTTTCTTTTTTGGGGGCTAAAGAA AACAAGATGATAATATAATAATTTTGTGTTCTTATTTATTATTGTAAATA ATATTCTTCACATTGAAAGTGAGGTAAAGAAATATCTTAAAACAAACAAA AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000611XLOC_000611Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001091-exon-sc0000007-1575043694:73129..73291TCONS_00001091-exon-sc0000007-1575043694:73129..73291Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:72510..72542TCONS_00001091-exon-sc0000007-1575043694:72510..72542Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:70900..72193TCONS_00001091-exon-sc0000007-1575043694:70900..72193Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:70487..70709TCONS_00001091-exon-sc0000007-1575043694:70487..70709Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:69663..69742TCONS_00001091-exon-sc0000007-1575043694:69663..69742Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:69103..69241TCONS_00001091-exon-sc0000007-1575043694:69103..69241Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:65140..65280TCONS_00001091-exon-sc0000007-1575043694:65140..65280Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:64530..64611TCONS_00001091-exon-sc0000007-1575043694:64530..64611Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:63149..63239TCONS_00001091-exon-sc0000007-1575043694:63149..63239Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:62896..62972TCONS_00001091-exon-sc0000007-1575043694:62896..62972Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:62500..62757TCONS_00001091-exon-sc0000007-1575043694:62500..62757Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:62216..62361TCONS_00001091-exon-sc0000007-1575043694:62216..62361Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:61482..61617TCONS_00001091-exon-sc0000007-1575043694:61482..61617Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:61212..61356TCONS_00001091-exon-sc0000007-1575043694:61212..61356Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1575043694:60040..60629TCONS_00001091-exon-sc0000007-1575043694:60040..60629Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:73129..73291TCONS_00001091-exon-sc0000007-1510915933:73129..73291Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:72510..72542TCONS_00001091-exon-sc0000007-1510915933:72510..72542Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:70900..72193TCONS_00001091-exon-sc0000007-1510915933:70900..72193Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:70487..70709TCONS_00001091-exon-sc0000007-1510915933:70487..70709Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:69663..69742TCONS_00001091-exon-sc0000007-1510915933:69663..69742Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:69103..69241TCONS_00001091-exon-sc0000007-1510915933:69103..69241Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:65140..65280TCONS_00001091-exon-sc0000007-1510915933:65140..65280Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:64530..64611TCONS_00001091-exon-sc0000007-1510915933:64530..64611Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:63149..63239TCONS_00001091-exon-sc0000007-1510915933:63149..63239Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:62896..62972TCONS_00001091-exon-sc0000007-1510915933:62896..62972Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:62500..62757TCONS_00001091-exon-sc0000007-1510915933:62500..62757Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:62216..62361TCONS_00001091-exon-sc0000007-1510915933:62216..62361Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:61482..61617TCONS_00001091-exon-sc0000007-1510915933:61482..61617Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:61212..61356TCONS_00001091-exon-sc0000007-1510915933:61212..61356Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1510915933:60040..60629TCONS_00001091-exon-sc0000007-1510915933:60040..60629Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:73129..73291TCONS_00001091-exon-sc0000007-1491911889:73129..73291Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:72510..72542TCONS_00001091-exon-sc0000007-1491911889:72510..72542Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:70900..72193TCONS_00001091-exon-sc0000007-1491911889:70900..72193Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:70487..70709TCONS_00001091-exon-sc0000007-1491911889:70487..70709Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:69663..69742TCONS_00001091-exon-sc0000007-1491911889:69663..69742Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:69103..69241TCONS_00001091-exon-sc0000007-1491911889:69103..69241Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:65140..65280TCONS_00001091-exon-sc0000007-1491911889:65140..65280Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:64530..64611TCONS_00001091-exon-sc0000007-1491911889:64530..64611Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:63149..63239TCONS_00001091-exon-sc0000007-1491911889:63149..63239Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:62896..62972TCONS_00001091-exon-sc0000007-1491911889:62896..62972Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:62500..62757TCONS_00001091-exon-sc0000007-1491911889:62500..62757Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:62216..62361TCONS_00001091-exon-sc0000007-1491911889:62216..62361Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:61482..61617TCONS_00001091-exon-sc0000007-1491911889:61482..61617Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:61212..61356TCONS_00001091-exon-sc0000007-1491911889:61212..61356Clytia hemisphaericaexon
TCONS_00001091-exon-sc0000007-1491911889:60040..60629TCONS_00001091-exon-sc0000007-1491911889:60040..60629Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:60040..73291 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.50787 1.90095 1.58486 0.862991 38.9127 18.183 26.5871 22.9912 5.70235 8.13834 5.92439 5.19281 8.29805 5.32312 8.80506 8.57722 14.3429 10.1473 5.80173 8.22701 7.81831 6.9553 2.68187 6.50379 8.28809 13.887 3.12942 1.71162 3.46102 2.64516
Blast
BLAST of TCONS_00001091 vs. Swiss-Prot (Human)
Match: PTPRB (Receptor-type tyrosine-protein phosphatase beta OS=Homo sapiens GN=PTPRB PE=1 SV=3)

HSP 1 Score: 315.079 bits (806), Expect = 6.540e-88
Identity = 182/456 (39.91%), Postives = 261/456 (57.24%), Query Frame = 2
Query: 1610 SAAKFLNIKLG-----ISKDCTKVDQEICNGPLTPSTNYSIQLEVF----------FTNGTSLTTPSSKPWSTLQKAVIVPQEGVRSSXXXXXXXXXXXXXXXXXXXXXXXXCRKKRSRKYLRGQQDKDSMGVSLMSTNYQRNGASRLKKKFSGPDILTERRKSLKGMTRPVFIRDFRAWVERSASDSTFRFAEEFESIRDVGKFERHEVADMAENNGKNRYVNVLPYDYTRVKLSSIDDEPGSDYINANYIHGYKQPRAYIATQGPLPSTTDHFWQMVWEQKSRIIVMVTQCNEKNRVKCHQYWPAS-GSTRYGEIEVTLKHETIYPEWTEREFLMTFEGE---SRLLRHFQYTAWPDHGVPRSSKEMLQFVTTVR--FHQRPDDGPVICHCSAGVGRTGTYLCVDILVNKLQTENNVDVYGVVCLMRTQRCSMVQTEDQYIFIHRVILDYLKQR 2914
            S +K  NIKLG     +   C    Q+ C+GPL P T Y I +  F          FT      T  S P +T  + +    EGV + + +I + V +V  +          CR+K S       +++ S  +S+           R  +  S    L   +K  +  + P+ I  F     +  +DS +  ++E+E ++DVG+ +  ++A + EN GKNRY N+LPYD TRVKLS++DD+P SDYINA+YI G    R YI TQGPLP T D FW+MVWEQ    IVMVTQC EK RVKC  YWPA   S  YG++ + +  E++ PEWT REF +  E +    RL+RHF YT WPDHGVP +++ ++QFV TVR   ++ P  GP + HCSAGVGRTGT++ +D ++ +L ++++VD+YG V  +R  R  MVQTE QY+++H+ + D L+ R
Sbjct: 1539 SNSKSFNIKLGAEMESLGGKCDPTQQKFCDGPLKPHTAYRISIRAFTQLFDEDLKEFTKPLYSDTFFSLPITTESEPLFGAIEGVSAGLFLIGMLVAVVALLI---------CRQKVSHG-----RERPSARLSI-----------RRDRPLSVH--LNLGQKGNRKTSCPIKINQFEGHFMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRAR 1967          
The following BLAST results are available for this feature:
BLAST of TCONS_00001091 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTPRB6.540e-8839.91Receptor-type tyrosine-protein phosphatase beta OS... [more]
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