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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001048 ID=TCONS_00001048|Name=TCONS_00001048|organism=Clytia hemisphaerica|type=transcript|length=272bp TTACGCAATAACCCAATATTGGTGAAGAATACAACATGGGAACATGAATG GTGTAATAAATTATCATGATTCCACTGATTCCAATGGCTCTGGTAACTTA ACGTGCAGCGAGAAATCAAACGAGTGTTGGTCGAAAGCGAAACATCTTGC AGACCGAGTCACGTGTCAAATCGGACATGCCAAGTGTAAAGCCAAGTGCA AATATGAGtGTGGTTTGGCCTATGATGCTTGCACCGGATTGACCGGAGCA TTTATACACTGTTTGTCAAAAG Run BLAST on NCBI transcript from alignment at sc0000007:967723..969670+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001048 ID=TCONS_00001048|Name=TCONS_00001048|organism=Clytia hemisphaerica|type=transcript|length=1948bp|location=Sequence derived from alignment at sc0000007:967723..969670+ (Clytia hemisphaerica) TTACGCAATAACCCAATATTGGTGAAGAATACAACATGGGAACATGAATG
GTGTAATAAATTATCATGGTAATGTGATGACGTATTCCTTATTTCCTGTC
TTGAAAATAGTAAATAAGAAAAATTGAGCCAAATACAGTAAAAGTAATAT
CTGGTAATATCGATTAATTAAAAAACTGTTACTAATGGTATCATTTCCTT
TTATAGATATTATTACCTCAATTTTCGTTTGGAGTTTAgattaaaattca
taaaatttaatCAGTTTGCCAGCTGTCAACCTCGTACCCAGGGCGATAAG
CTTTCTGATATTAGATAGGACGCTTAGACGTAACAGTGAGCTTCCTATTT
GCCTCTCATCTAGACTAGCAACTATATTTTCCCGCGCGGCCGCTGACTGT
TCGCCATGGAATCGAGGTTGGCCAGCTGTATCTATGTTTGAATGTTTTAT
GAAATGAAcccggggggcactcgatctgaaaacgaccatacgttcggccc
aaaatttggcttctaaaatcggacccttacagtgcagtgaatttccatga
aaaatcatacccttacagtgcactttttcaaaatttctcgcccgtaaggg
cgaatttttgcacttttccaagaaaatgtggaatttttcctccaaaattg
accaattttgtgccaatttaccaaaaaattggccttttatcacaatttcc
tacccttacagtgcagatcagtgcagttttgtaatttcctacccttacag
tgcagatcagtgcagttttgtaatttcctacccttacagtgcagatcagt
gcagttttgtaatttcctacccttacagtgcagatcagtgcagttttgta
atttcctacccttacagtgcagatcagtgcagttttgtaatttcctaccc
ttacagtgcactagctgaactatgaaaaaacctacccttaagggccgatc
GGCTGGTAGGTCATTTTCCTtgagggcccccccccccctccccggggaaa
tgaatcattaaaaataaacataaaacaGCAATAAATCGTCTTCAAACACA
AACATTTTCTCTCTGGtgaaattctaaaaactttatcaCAGTTCAGCAAC
CATGTATTCGTTGAAAGTCTGCATCTTTTTGGCTTTTGTTACCCTCGTCA
TTTCTCAGGTTAGGATGATATATGCTCGTTGTATGTTAGTGTATACAGAT
ACTTATTGTGCGTTTCTTTTTGGTTGTGGTAGTTGAAAAGCTGGACTGAA
ATTTCGATGAGCATGTTTCATTTTCTCGTTTTAGATTCCACTGATTCCAA
TGGCTCTGGTAACTTAACGGTGAGTTTTGAAGAGAAATTCTCCTTGCAAA
GTGAAACTTCCGTCGATTAATGTTGGAATGACTAATAATCAAAATCGTTG
AAGTTTGTGATGATTATTACGGATATGTAGAAGAGAGTTTTCAGTTCGTT
GAGCCCCCCTGAGCCGAACTTACACACTTAAACCCTTACTTTATATCATT
CATTGCTATTTTTTCTTGACACTTATTAGTGCAGCGAGAAATCAAACGAG
TGTTGGTCGAAAGCGAAACATCTTGCAGACCGAGTCACGTGTCAAATCGG
ACATGCCAAGTGTAAAGCCAAGTGCAAATATGAGGTAAATGTTAACAGCT
CTCTAAATACAAGATTTTTATGAGTCCATTTGACAGTCATAACTCAAAAA
AAGTTCGActttggtcaaattttcaattgcAACATCGCCTGGCCGGCAAA
TTTTTGACCAAGAACGCAATCGATACTATCTCGCACCTTTTTCCAAAGTT
TCAAAACACGTATTTgttaaaatgaaagtgaaacaTGGGTGTTATGGTGT
ATTCTAAAGGTAcattctttttcttgtttttcagtGTGGTTTGGCCTATG
ATGCTTGCACCGGATTGACCGGAGCATTTATACACTGTTTGTCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00001048-exon-sc0000007-1491911889:967723..967790 | TCONS_00001048-exon-sc0000007-1491911889:967723..967790 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1510915933:967723..967790 | TCONS_00001048-exon-sc0000007-1510915933:967723..967790 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1575043694:967723..967790 | TCONS_00001048-exon-sc0000007-1575043694:967723..967790 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1491911889:969007..969041 | TCONS_00001048-exon-sc0000007-1491911889:969007..969041 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1510915933:969007..969041 | TCONS_00001048-exon-sc0000007-1510915933:969007..969041 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1575043694:969007..969041 | TCONS_00001048-exon-sc0000007-1575043694:969007..969041 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1491911889:969252..969356 | TCONS_00001048-exon-sc0000007-1491911889:969252..969356 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1510915933:969252..969356 | TCONS_00001048-exon-sc0000007-1510915933:969252..969356 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1575043694:969252..969356 | TCONS_00001048-exon-sc0000007-1575043694:969252..969356 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1491911889:969607..969670 | TCONS_00001048-exon-sc0000007-1491911889:969607..969670 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1510915933:969607..969670 | TCONS_00001048-exon-sc0000007-1510915933:969607..969670 | Clytia hemisphaerica | exon |
TCONS_00001048-exon-sc0000007-1575043694:969607..969670 | TCONS_00001048-exon-sc0000007-1575043694:969607..969670 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000007 | supercontig | sc0000007:967723..969670 + |
Blast
The following BLAST results are available for this feature:
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