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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001037 ID=TCONS_00001037|Name=TCONS_00001037|organism=Clytia hemisphaerica|type=transcript|length=1299bp ACAAAAGCATCCATTCGCAAGTAATCCTGGACTGTTCAGAGCATTAAATA CTAGTTTCATTTTAGTTCAATTTCCGACATATTTATGTTCCGGCTTCAAC GCTATGGTTTACATTGTCAAAGATAAAAGGATCAAGAAATATTACGGAat tatGTTATTACGGTGtagaatctgaaggtctttaaTCAGTAAAACGAGGA AAGGTTTAGAACTATACAGTATAccaaaaattttcaatcgatcttGATGG ATTAGCAAACAAAAAGCCAGCCTCTCATGTGACATATCGACCGAAAGTGG ATTCGAATAATGTTGGCATGCCATGAGaagaattttggaaaattgtcatc attttactttattgataaaaataagaGCCAATAGATTTATTCAAAATGTT AGAATTGTTTAAACTTGGTTAAAAACTATTTACAATACTCCGCTCTTGAC ATTTAAAATACCTCAAAGATTTGCAAATATATCTTTCTCTCCACCTCCAC AGGAACTTCAAAGTAGATTTGATATTCGAAAGTTCATCTTCGTTAATATC GTTCGATATCTCATCGTTCTTTACTTCTCGATTTTTGTTCAGTTTACAAC AGAATAATTTGGCTGTGATGCATTTGAATAGTTTGTTTTGTGTATTGACA TTCTGGTTATTGATGCAGATATCATAAATAAAATTACAACCTATTCCACA AGCATGAGTATTGTCGAGTATATAGAAGATAACAGTGATCAAAATAAGCA GTCTTTGTCGTTTTGGCTTCATCGTCGTAAATATTACCACATTTCACAGT CAGCAGATCGACTCCAGTAAAAAGTCCTCAAACCTTTTTTTATCCAAAGG GTAGCAATTTTATCAAAGTCGTTTATTTAGTTTGAACTCTACAATTTTTT ATCACGAAAAGACTAGCCTTGACAGCTTCTTAACACCAAGTACATCACAA CACATCATTTCACCTTTTGACTATGTATTTATCCTCCTTCTTGTTACAAG TGCACTGTTTGTTTTTAAAGTATCTTGATATCCTTTTTGCATCACATCTA TTTTGTTGCTCTGatgtgtttgtttatttttataccATCACTTAATAAAA CGATCACTTTCCGGTTGCGAAAACGCAACTTCTCGCCATTCATATATGAA GTGTTTCCTGTAACCACGTCAACCACACGCTTTTAGACGGTGGTTGGTCA CGGTTTGTGGAAGAGCAGAATCAGCTTTTCTCGGAACGGGCCGGAAGAAT TACACAAATAATAATGTGGACGAGATTTTGGAAATTAGGTCCTCTGTCG Run BLAST on NCBI transcript from alignment at sc0000007:893153..895691+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001037 ID=TCONS_00001037|Name=TCONS_00001037|organism=Clytia hemisphaerica|type=transcript|length=2539bp|location=Sequence derived from alignment at sc0000007:893153..895691+ (Clytia hemisphaerica) ACAAAAGCATCCATTCGCAAGTAATCCTGGACTGTTCAGAGCATTAAATA
CTAGTTTCATTTTAGTTCAATTTCCGACATATTTATGTTCCGGCTTCAAC
GCTATGGTTTACATTGTCAAAGATAAAAGGATCAAGAAATATTACGGAat
tatgttattattattattattattattatacagtaTACAAGTTCACAGGC
CCGAGGTGGGCCTCTACGAACCGGTTTGATTACAATTCTAATTTGTTAAA
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCATTCCATGTAGGGATTGTTCTATAGTAGAATGACT
TTGTTTGCGCTCCTCGAAGACCATCAGCAGCAAAGTTTGGAACGAATTCG
TGATCGTGAAATCTGACTGGACGAGTTCTTTTAACTAGCTTGTCCCGAGT
TGTTTTCGGATCATAAAAATGGATATGCTTATACATTTGGACCATATCGC
AGAAAAGTCTTCTAAACTCAAGAGATGGAAGCTTGAGTCTTTGTAAACGC
TCCTCATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGTACGCTTCCTTGAGGAAT
TCCACTTATGACATGGTCAGTAGTTGATTTAGCTGAGTTAACCTTGACTA
GTTGCTTGCGGTCTGATAAAAATGCTATAATCCATTTTAACAGGTTATTA
CGGTGtagaatctgaaggtctttaaTCAGTAAAACGAGGAAAGGTTTAGA
ACTATACAGTATAccaaaaattttcaatcgatcttGATGGATTAGCAAAC
AAAAAGCCAGCCTCTCATGTGACATATCGACCGAAAGTGGATTCGAATAA
TGTTGGCATGCCATGAGaagaattttggaaaattgtcatcattttacttt
attgataaaaataagaGCCAATAGATTTATTCAAAATGTTAGAATTGTTT
AAACTTGGTTAAAAACTATTTACAATACTCCGCTCTTGACATTTAAAATA
CCTCAAAGATTTGCAAATATATCTTTCTCTCCACCTCCACAGGAACTTCA
AAGTAGATTTGATATTCGAAAGTTCATCTTCGTTAATATCGTTCGATATC
TCATCGTTCTTTACTTCTCGATTTTTGTTCAGTTTACAACAGAATAATTT
GGCTGTGATGCATTTGAATAGTTTGTTTTGTGTATTGACATTCTGGTTAT
TGATGCAGATATCATAAATAAAATTACAACCTATTCCACAAGCATGAGTA
TTGTCGAGTATATAGAAGATAACAGTGATCAAAATAAGCAGTCTTTGTCG
TTTTGGCTTCATCGTCGTAAATATTACCACATTTCACAGTCAGCAGATCG
ACTCCAGTAAAAAGTCCTCAAACCTTTTTTTATCCAAAGGGTAGCAATTT
TATCAAAGTCGTTTATTTAGTTTGAACTCTACAATTTTTTATCACGAAAA
GACTAGCCTTGACAGCTTCTTAACACCAAGTACATCACAACACATCATTT
CACCTTTTGACTATGTATTTATCCTCCTTCTTGTTACAAGTGCACTGTTT
GTTTTTAAAGTATCTTGATATCCTTTTTGCATCACATCTATTTTGTTGCT
CTGatgtgtttgtttatttttataccATCACTTAATAAAACGATCACTTT
CCGGTTGCGAAAACGCAACTTCTCGCCATTCATATATGAAGTGTTTCCTG
TAACCACGTCAACCACACGCTTTTAGACGGTGGTTGGTCACGGTTTGTGG
AAGAGCAGAATCAGCTTTTCTCGGAACGGGCCGGAAGAATTACACAAATA
ATAATGTGGACGAGATTTTGGAAATTAGGTCCTCTGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00001037-exon-sc0000007-1491911889:893153..893305 | TCONS_00001037-exon-sc0000007-1491911889:893153..893305 | Clytia hemisphaerica | exon |
TCONS_00001037-exon-sc0000007-1510915933:893153..893305 | TCONS_00001037-exon-sc0000007-1510915933:893153..893305 | Clytia hemisphaerica | exon |
TCONS_00001037-exon-sc0000007-1575043694:893153..893305 | TCONS_00001037-exon-sc0000007-1575043694:893153..893305 | Clytia hemisphaerica | exon |
TCONS_00001037-exon-sc0000007-1491911889:894546..895691 | TCONS_00001037-exon-sc0000007-1491911889:894546..895691 | Clytia hemisphaerica | exon |
TCONS_00001037-exon-sc0000007-1510915933:894546..895691 | TCONS_00001037-exon-sc0000007-1510915933:894546..895691 | Clytia hemisphaerica | exon |
TCONS_00001037-exon-sc0000007-1575043694:894546..895691 | TCONS_00001037-exon-sc0000007-1575043694:894546..895691 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000007 | supercontig | sc0000007:893153..895691 + |
Blast
The following BLAST results are available for this feature:
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