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TCONS_00001022 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001022
Unique NameTCONS_00001022
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2452

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001022 ID=TCONS_00001022|Name=TCONS_00001022|organism=Clytia hemisphaerica|type=transcript|length=2452bp
aTCNTCACACCACAATGATCAATGGGCTTGGTATCTTAGGATGGGGTGTT
GGTGGTATTGAAGCAGAAGCAGTGATGCTTGGTCAAGTCATCAGTATGGT
GGTACCCAAAGTTATTGGATATAAAATCACTGGTACTATGAACCCTATTG
CTACCTCCACTGATGTCGTCCTCACTATTACTAAGCATTTAAGGCAGATC
GGTGTGGTTGGAAAGTTTGTCGAGTTCTTCGGGGCTGGCGTGGCAAGTTT
GTCGATTGCCGATCGTGCGACCATATCTAACATGTGTCCAGAGTATGGAG
CCACTGTTGGCTTCTTCCCTGTTGATAAAATGAGTTTGGAATACTTAAGA
CAGTCAGGTCGAACTGAGGAGCACATCAAATACATTGAAGATTATATGAA
AGCCAACaaccttttccgtgattacacAAATCCTGAACAAGACCCCGTCT
TCACCGAGATCGTGGAACTTGATCTTGGCAGTGTTGTCCCATCATGCTCT
GGTCCAAAACGTCCCCATGATCGAGTACCAGTCTCCGAAATGAAAACTGA
TTTCAGGAGTTGTCTCCTCAACAAAGTTGGTTTCAAAGGTTTCGGAATCG
TTGAAGAAAAAACTGAAACGATCGCTCCTTTCATTTACGAAGGAAAAGAG
TACACTCTCAAACACGgcTCGGTGGTTATCTCTTCGATCACCAGTTGTAC
AAACACAAGTAATCCGTCAGTCATGCTGGGTGCAGGCTTGTTAGCCAAGA
AAGCTATCGAATCTGGGTTGACCACATTACCATACATCAAGACCAGTGTC
AGCCCTGGATCAGGTGTTGTGACGTACTATCTAAAAGAAAGCGGTGTTGA
TAAATACCTCGAACAATTAGGTTTCGGCATCGTTGGATATGGTTGTATGA
CTTGTATTGGAAACAGTGGTCCTCTACCTGAAGCTGTCGCTGAAGTAATC
GAAAAGAACGATCTTGTTGTGTGTGGTGTTCTATCTGGTAACCGTAACTT
CGAAGGACGTATCCATCCTTTGACAAGAGCAAATTATTTGGCTTCACCGC
TTCTCGTTATCGCTTATGCTTTGGCTGGTACTGTTGATATCGACTTCGAA
AAAGAACCAATCGgtAGAACGGAGGAAGGCAAAGAAGTCTTCTTGCGCGA
CATCTGGCCATCAAGACAAGAAATTCAGGAAATGGAACGAAAAACTGTCA
TCCCAGCCTTGTTCCAAGAAGTTTATTCGAAGATTCAGACTGGAAACCCA
GCATGGAATAACTTGGAAACCAGCGCCTCTCTTCTTTACCCTTGGGAATC
AAGTTCAACTTATATTCAACCCCCACCATTCTTTAATGAAATGACACTTG
TTGTACCAGAAGTTGAAAGCATCGCCAATGCAGCAGTCTTATTGAATGTT
GGTGATTCAGTCACCACCGATCACATCTCCCCTGCTGGAATGATCTCCAG
AACGAGTCCTGCTGCACGTTATCTTGGGGGCCTGGGACTGACGCCAAGAG
AATTCAATTCTTACGGCTCACGACGTGGTAATTACAATGTGATGGCACGT
GGTACTTTTGCAAACATCCGATTGGTCAACAAATTCATGAACAAACCAGG
ACCTAAAACTAAACATTGGCCTTCTGGAGATGAGATGGACATATTCGATG
CAGCCGAGAGAtacatcaaagaaaaaagatCGCTCATTATTTTGGCTGGC
AAAGAATACGGATGTGGATCATCAAGAGATTGGGCTGCTAAAGGTCCATG
GATGCAGGGCATCAAAGCAGTGATCGCTGAGAGTTACGAACGTATTCACC
GAAGTAACTTGATTGGGATGGGTATTGCTCCGCTTCAATACTTATCCGGT
GATACTACGGAAAGCCTCGGTTTGACCGGTAAAGAGAGCTTCACTATTGA
ATATCCAGAAAATTTGGGAGCTGGTTCTATGGTGACTGTCAAGGTTGATG
ATGGTCGATCGTTCCAAGTGAAAGCACGTTTTGATACCGATCTCGAGTTT
GTTTACTACAAAAATGGCGGCATCCTCAATTACATGATTCGAAAGATCGC
TTCTTCAGCTGAGTGAATTACTGGCCGTTGGATCGGACTTGAGTAAAACG
GAAAATATGCAGTTCGGATGGTGCGCGTCCCGTTCTGTTTTTGAATAAAG
ATTTATTATTTAGTTTTTTTAGCAGCTgggtaatttcaattttttaattt
caaaattttgatactgAACTGATACTTagatttgttgttgttgttttcaa
tatttcagTCAAACGATGTCGATGTGAAAGACAAGAACGGTCAACCTTTT
TTTAGCCgctttttttcaatcaaacaaTGAAACAGTTTTAAATTATTGCT
AATATTATTTTGTgagttttgtagattttttgaattttgtgaTACGAAAG
AATAGCAAGGGACAACGAAATTACATCATGACTCCTTTttttaccaatga
aa
Run BLAST on NCBI

transcript from alignment at sc0000007:774178..780652+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001022 ID=TCONS_00001022|Name=TCONS_00001022|organism=Clytia hemisphaerica|type=transcript|length=6475bp|location=Sequence derived from alignment at sc0000007:774178..780652+ (Clytia hemisphaerica)
aTCNTCACACCACAATGATCAATGGGCTTGGTATCTTAGGATGGGGTAAG TAAGCTCGTTTGACAAgctattttttgtttaagttagTCAAAGCTGAAAA TGTCTTTTTTGTACTATGAACAAGTAAGGAACATTTCTGACAAATTGATG ACAAAGCAGAGTGCTTTTTCCTGCTTTGTTTATTACAATAGTAAATAGTA AATAGAATGTAAATAAGACAACTTTCAAAACCTTATAGGTGTTGGTGGTA TTGAAGCAGAAGCAGTGATGCTTGGTCAAGTCATCAGTATGGTGGTACCC AAAGTTATTGGATATAAAATCACTGGTACTATGAACCCTATTGCTACCTC CACTGATGTCGTCCTCACTATTACTAAGGTGAGTAGATTCGATCCATCCA AATTTTAGGTTTGCTAAAGTTTACTTTCAGTGGATTAATTTCGGCGggga ttaaattaaattaaatcccTGCAAAATTTAACGCAAATAATATCATGTGA AAGTCACATCTAATTTTCATCCAGTTTGGTGTTCCAAAATTCCCAATTCA CTAAATTAAGACCCCACCTAAAATCGTATATTTACCAATCGCCAAAttcc acgccaaaattaatccatttAAGGTATCCGTTTTGTAGATACTTTTGCAA GCGCAGTAAATAGGGTCATATAATTGATTTCTTCTATATCTCGAATAAAA TACgtattcaaaattaaaatttcaaatagcaGCCTTTCCTTCATCAActt ttaactttctttttaatttacaTCTTTTCAATCAAATTAGATAATTTTTC CAACGAGAACGAAACTAAAGATGTCGATGTTTTTCTTTCAGCATTTAAGG CAGATCGGTGTGGTTGGAAAGTTTGTCGAGTTCTTCGGGGCTGGCGTGGC AAGTTTGTCGATTGCCGATCGTGCGACCATATCTAACATGTGTCCAGAGT ATGGAGCCACTGTTGGCTTCTTCCCTGTTGATAAAATGAGTTTGGAATAC TTAAGACAGTCAGGTATGGTTGATGTTTTACATCGAATACTCCCGGAAAT TCTTACCAGTTTATGATGTAGACTGAAAAAATCAGTCGTTCTGTCCTGAC CAATTTAAAAACaacgaaaattttcttttaaaacttcaaaGTTCAAGAAA TGACCAGAAAAACTATGTGAGACTATGACTTGATAGTTGATAGTGCTTTT CTTGTCGCTCGATCGCGTACATTATTCGGTAATTCGATCTTTGTTTAAAA TCAACTATAGGTCGAACTGAGGAGCACATCAAATACATTGAAGATTATAT GAAAGCCAACaaccttttccgtgattacacAAATCCTGAACAAGACCCCG TCTTCACCGAGGTATTATATTTAATCCTTACTGACAAGTTTATTCGAAGA AATTCTTGCAAGAAACTACTTTTTTTGTGATTCGTTCTCTTAGATCGTGG AACTTGATCTTGGCAGTGTTGTCCCATCATGCTCTGGTCCAAAACGTCCC CATGATCGAGTACCAGTCTCCGAAATGAAAACTGATTTCAGGAGTTGTCT CCTCAACAAAGTTGGTTTCAAAGGTTTCGGAATCGTTGAAGAAAAAACTG AAACGATCGCTCCTTTCATTTACGAAGGAAAAGAGTACACTCTCAAACAC GGTAATTTCTATGACATCGTTTATCTATTATAAAATTTCTTTACGAGTAA TGCGTCAGTAATTTATagtttcaaaacattttaaagttattttaagCAGT CTAAGTCCATATACACGagtgttcttttttcaaattcaggcTCGGTGGTT ATCTCTTCGATCACCAGTTGTACAAACACAAGTAATCCGTCAGTCATGCT GGGTGCAGGCTTGTTAGCCAAGAAAGCTATCGAATCTGGGTTGACCACAT TACCATACATCAAGACCAGTGTCAGCCCTGGATCAGGTGTTGTGACGTAC TATCTAAAAGAAAGCGGTGTTGATAAATACCTCGAACAATTAGGGTAATT CATTTTGACTCATCTTAAGTTTTTAAAACACCATTTGCAAACCGTTTACG GTTTTACCATTTAGGTAATCGTCGACAGGGTTTGTCAAGTTCGTAAAATC AGTGTAAAAGAATGGCTGTTACTCAGTGAAGACTATTTCTCCCCACATTG ACAAAATTGAGTTCTAAGCGTAGACTTTGTAGCTAACTAGGAGTGCTAAT AGCCATAATGACATTACCCAATATATTTAGACGAATTTATAACACTACTT TTCAGCTAATGATATTCTTCTCTCTCCCTTTCAGTTTCGGCATCGTTGGA TATGGTTGTATGACTTGTATTGGAAACAGTGGTCCTCTACCTGAAGCTGT CGCTGAAGTAATCGAAAAGGTAACTTGAAATCTTTTCATTATATATGCAA ATTTATTCCTATAAGACATGAAATCATAAGTCCTATGATTGATGCCAGTT TTTTGAGTGAAGCAACCCTGAGGAACTCGATGGAAATCGTAATATCCTCT TGTTAGAGCAAAATTGGAAACTCGCGCCTATTTCAACAGCTATAAAATTA AAGCAAAGTCAGTCTTTTGGAAACCATTGCCGTTTGAGCTTGGCAAGCAG TTCTTGTCTCCTTAGTTTATCGCTTTGCTAGTTACTGTAATTTTCTCGCA CAGAACGATCTTGTTGTGTGTGGTGTTCTATCTGGTAACCGTAACTTCGA AGGACGTATCCATCCTTTGACAAGAGCAAATTATTTGGCTTCACCGCTTC TCGTTATCGCTTATGCTTTGGCTGGTACTGTTGATATCGACTTCGAAAAA GAACCAATCGGTAAGATGAAACGTTGCACTTTTTACTTCTATTTCTCAAT AAGCATGGTCTCCGTCTGGCTAATAAGGTTCCACTTTTTTGTGTTGACAG ACAATTATAGAGATAACAATAACAAAGTTAGCTGATCGAGTTAGTAGCCT TTGTCACATGTTCAAGTATTCAACAAATTTGCTTTTGGAAAAATNCGTTA GCTGATCGAGTTAGTAGCCTTTGTCACATGTTTAAGTATTCAACAAAttt gcttttggaaaaataatcgttctatatttttttacgtttttaggtAGAAC GGAGGAAGGCAAAGAAGTCTTCTTGCGCGACATCTGGCCATCAAGACAAG AAATTCAGGTGAATATTTTTATTAGCACAtaatattttttccctacacTG TAATATTTTTATCTCGACTTAATTATGTGCTTTTTTCCGTAGGAAATGGA ACGAAAAACTGTCATCCCAGCCTTGTTCCAAGAAGTTTATTCGAAGATTC AGACTGGAAACCCAGCATGGAATAACTTGGAAACCAGCGCCTCTCTTCTT TACCCTTGGGAATCAAGTTCAACTTATATTCAACCCCCACCATTCTTTAA TGAAATGGTAAGAATCTCATTTTAAATATGATGTATTTTATCTCTTCAGA TCTTCGAAATTCTTTTGTCTAAGCTTATTTTTCGTGCTGCACTGAGAAGT ACCAACAAATACCTTAAGTAGattaattttgacgaatttggcGAAATGTA AAAAACTCGTCAAATTAATATCCgaagtaaaatttaaaaaatcggccatt cgccaaattaaatccccactAAACTTAACCAAAAGATTAATACGCATAGC GATATACATAGCGATTCTCATGTACATTACTGACTTCAATCTCcccattc gccaaatttaatccccgccaaaaatcgtattttgacCAAATATCAAATGA AATCTGCGCCAAAATTAAAAGTTGGTagtcaaatttcataaatttttctc CAGACACTTGTTGTACCAGAAGTTGAAAGCATCGCCAATGCAGCAGTCTT ATTGAATGTTGGTGATTCAGTCACCACCGATCACATCTCCCCTGCTGGAA TGATCTCCAGAACGAGTCCTGCTGCACGTTATCTTGGGGGCCTGGGACTG ACGCCAAGAGAATTCAATTCTTACGGCTCACGACGTGGTAATTACAATGT GATGGCACGTGGTACTTTTGCAAACATCCGATTGGTCAACAAATTCATGA ACAAACCAGGACCTAAAACTAAACATTGGCCTTCTGGAGATGAGGTAAAT TTAAATAACTTTCCATTTGCAAATATTTAATTTCGACTAATTGCCCCAAT CTAACCATATTACGTCCCTCTTAAACCagctactttaatcgtagaaattt tagcgagactaattttagcgtatattagcgagtcagaaaaatctagattt tttttggatttattttagtgaatcacgatttcaaaaaatttctcgtggat aaattttagcgaatactcgtattacattattgactgaattcgttttctag catttctttgcactgaaactcTTTCTATTGATAAagatgtatcaaggcaa tataaccagaaatttcgcgcggataaattttagtgatctgtcgattcggc gtgttttagcgagatttattttagcgaaaatagggaaaactcgctaaaac gctaaaattagtctcgctaaaatttctacgattaaagtaaatGTTTGCAC GGAAGAACCTACAATTCTTGTTCTTTTAGATGGACATATTCGATGCAGCC GAGAGAtacatcaaagaaaaaagatCGCTCATTATTTTGGCTGGCAAAGA ATACGGATGTGGATCATCAAGAGATTGGGCTGCTAAAGGTCCATGGATGC AGGTATGTGCGTACTCATATAATCCAATAACCATGATGACACGTCTTCTC GGTTTCCTTAAATCTGAAATTAATCAGCAGTAAAATGGAacagttttctt ataaatataCCTTTAATCTATTCTCCATAGCTATGAATCTCAAAAACCTG TTTAATGTAGATGAATTTAGTATTCGGCACTTCATAGAAACAACAAATCA TGGAATTTCAGTAGAAATTGTTAGCACAATGCAACTTTATCTTTTTAGGG CATCAAAGCAGTGATCGCTGAGAGTTACGAACGTATTCACCGAAGTAACT TGATTGGGATGGGTATTGCTCCGCTTCAATACTTATCCGGTGATACTACG GAAAGCCTCGGTTTGACCGGTAAAGAGAGCTTCACTATTGAATATCCAGA AAATTTGGGAGCTGGTTCTATGGTGACTGTCAAGGTAAGTGTTTCATTTC TACATATTTTCTAAACGAATCGTGCGAGTGTGAACTTAAAGAGAAAAAAC TCTATCGAAACTACACACCATTTTctgatgcattgctctgatttCTCCGA TGATAGACATGTAatgtttgacagccttcttcaacttgacatatGCTTGG TACCATTAAACCCAAGAAGACTTTCCAGAATACTTCTCTTTGGGGATTTG AATTTTAGTAACAACCTAAATCATGATATATTAAGTATAACCGTAAACTT TATCCAAGATACCGGTCGATTCGAGGGtccgttgttttgatttttcacaa tgctcatttagtttgttttttgtttttccttacctttctattgttttttt ttcctcgTTTCTCTTTTTATAAGGTTCCTCTCTCCTGGCGGTATAATCTA GCGGTTTTTTGCGGGAGGGCTGGAGCCTTTTAGTGTTTGTATTCTATGTT CGTGCCattacttataaataaaaagaaataaaaagcttCAATCTGATTAT TTGCAATGAAGCGAGTACATTCGTTCCaatgttgtcttctgaccagctGC CTTTGGAAAACAACAAATCCGGCGACCCTCAAACTCGCAATTTGCTGAAC TATTGAGCTACGGGCCATGTAATATATATCCAAAAGGAAAAACTCATGAT TAAATATGGctaatgacaaaaaattaacgacTAATAACTTTCTCCCATCC TTGTACTACCAGCCAGAATCCCTTCTATGTTCAATAAATCCTTAATTTGA TACATATCAGATACTATCAGTTTCTGTCAACGGAAAGTAAATGTATTTAT CTTTTATCATCTGTAGGTTGATGATGGTCGATCGTTCCAAGTGAAAGCAC GTTTTGATACCGATCTCGAGTTTGTTTACTACAAAAATGGCGGCATCCTC AATTACATGATTCGAAAGATCGCTTCTTCAGCTGAGTGAATTACTGGCCG TTGGATCGGACTTGAGTAAAACGGAAAATATGCAGTTCGGATGGTGCGCG TCCCGTTCTGTTTTTGAATAAAGATTTATTATTTAGTTTTTTTAGCAGCT gggtaatttcaattttttaatttcaaaattttgatactgAACTGATACTT agatttgttgttgttgttttcaatatttcagTCAAACGATGTCGATGTGA AAGACAAGAACGGTCAACCTTTTTTTAGCCgctttttttcaatcaaacaa TGAAACAGTTTTAAATTATTGCTAATATTATTTTGTgagttttgtagatt ttttgaattttgtgaTACGAAAGAATAGCAAGGGACAACGAAATTACATC ATGACTCCTTTttttaccaatgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000586XLOC_000586Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001022-exon-sc0000007-1491911889:774178..774222TCONS_00001022-exon-sc0000007-1491911889:774178..774222Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:774178..774222TCONS_00001022-exon-sc0000007-1510915933:774178..774222Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:774178..774222TCONS_00001022-exon-sc0000007-1575043694:774178..774222Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:774416..774555TCONS_00001022-exon-sc0000007-1491911889:774416..774555Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:774416..774555TCONS_00001022-exon-sc0000007-1510915933:774416..774555Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:774416..774555TCONS_00001022-exon-sc0000007-1575043694:774416..774555Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:775019..775190TCONS_00001022-exon-sc0000007-1491911889:775019..775190Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:775019..775190TCONS_00001022-exon-sc0000007-1510915933:775019..775190Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:775019..775190TCONS_00001022-exon-sc0000007-1575043694:775019..775190Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:775438..775538TCONS_00001022-exon-sc0000007-1491911889:775438..775538Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:775438..775538TCONS_00001022-exon-sc0000007-1510915933:775438..775538Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:775438..775538TCONS_00001022-exon-sc0000007-1575043694:775438..775538Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:775621..775828TCONS_00001022-exon-sc0000007-1491911889:775621..775828Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:775621..775828TCONS_00001022-exon-sc0000007-1510915933:775621..775828Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:775621..775828TCONS_00001022-exon-sc0000007-1575043694:775621..775828Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:775967..776171TCONS_00001022-exon-sc0000007-1491911889:775967..776171Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:775967..776171TCONS_00001022-exon-sc0000007-1510915933:775967..776171Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:775967..776171TCONS_00001022-exon-sc0000007-1575043694:775967..776171Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:776462..776546TCONS_00001022-exon-sc0000007-1491911889:776462..776546Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:776462..776546TCONS_00001022-exon-sc0000007-1510915933:776462..776546Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:776462..776546TCONS_00001022-exon-sc0000007-1575043694:776462..776546Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:776831..776987TCONS_00001022-exon-sc0000007-1491911889:776831..776987Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:776831..776987TCONS_00001022-exon-sc0000007-1510915933:776831..776987Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:776831..776987TCONS_00001022-exon-sc0000007-1575043694:776831..776987Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:777271..777335TCONS_00001022-exon-sc0000007-1491911889:777271..777335Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:777271..777335TCONS_00001022-exon-sc0000007-1510915933:777271..777335Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:777271..777335TCONS_00001022-exon-sc0000007-1575043694:777271..777335Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:777420..777584TCONS_00001022-exon-sc0000007-1491911889:777420..777584Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:777420..777584TCONS_00001022-exon-sc0000007-1510915933:777420..777584Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:777420..777584TCONS_00001022-exon-sc0000007-1575043694:777420..777584Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:777981..778271TCONS_00001022-exon-sc0000007-1491911889:777981..778271Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:777981..778271TCONS_00001022-exon-sc0000007-1510915933:777981..778271Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:777981..778271TCONS_00001022-exon-sc0000007-1575043694:777981..778271Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:778757..778879TCONS_00001022-exon-sc0000007-1491911889:778757..778879Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:778757..778879TCONS_00001022-exon-sc0000007-1510915933:778757..778879Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:778757..778879TCONS_00001022-exon-sc0000007-1575043694:778757..778879Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:779126..779311TCONS_00001022-exon-sc0000007-1491911889:779126..779311Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:779126..779311TCONS_00001022-exon-sc0000007-1510915933:779126..779311Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:779126..779311TCONS_00001022-exon-sc0000007-1575043694:779126..779311Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1491911889:780144..780652TCONS_00001022-exon-sc0000007-1491911889:780144..780652Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1510915933:780144..780652TCONS_00001022-exon-sc0000007-1510915933:780144..780652Clytia hemisphaericaexon
TCONS_00001022-exon-sc0000007-1575043694:780144..780652TCONS_00001022-exon-sc0000007-1575043694:780144..780652Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:774178..780652 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
133.394 134.917 114.201 116.213 24.0854 19.7124 40.6617 42.1679 85.6108 80.2475 114.448 115.999 109.36 132.496 123.294 116.898 83.7288 85.7429 84.8571 81.7292 79.1591 88.588 113.449 118.551 87.932 73.1066 110.679 152.709 137.332 123.711
Blast
BLAST of TCONS_00001022 vs. Swiss-Prot (Human)
Match: ACOC (Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3)

HSP 1 Score: 922.539 bits (2383), Expect = 0.000e+0
Identity = 470/682 (68.91%), Postives = 559/682 (81.96%), Query Frame = 3
Query:    6 HTTMINXXXXXXXXXXXXEAEAVMLGQVISMVVPKVIGYKITGTMNPIATSTDVVLTITKHLRQIGVVGKFVEFFGAGVASLSIADRATISNMCPEYGATVGFFPVDKMSLEYLRQSGRTEEHIKYIEDYMKANNLFRDYTNPEQDPVFTEIVELDLGSVVPSCSGPKRPHDRVPVSEMKTDFRSCLLNKVGFKGFGIVEEKTETIAPFIYEGKEYTLKHGXXXXXXXXXXXXXXXXXVMLGAGLLAKKAIESGLTTLPYIKTSVSPGSGVVTYYLKESGVDKYLEQLGFGIVGYGCMTCIGNSGPLPEAVAEVIEKNDLVVCGVLSGNRNFEGRIHPLTRANYLASPLLVIAYALAGTVDIDFEKEPIGRTEEGKEVFLRDIWPSRQEIQEMERKTVIPALFQEVYSKIQTGNPAWNNLETSASLLYPWESSSTYIQPPPFFNEMTLVVPEVESIANAAVLLNVGDSVTTDHISPAGMISRTSPAARYLGGLGLTPREFNSYGSRRGNYNVMARGTFANIRLVNKFMNKPGPKTKHWPSGDEMDIFDAAERYIKEKRSLIILAGKEYGCGSSRDWAAKGPWMQGIKAVIAESYERIHRSNLIGMGIAPLQYLSGDTTESLGLTGKESFTIEYPENLGAGSMVTVKVDDGRSFQVKARFDTDLEFVYYKNGGILNYMIRKIA 2051
            HTTMI+GLGILGWGVGGIEAEAVMLGQ ISMV+P+VIGY++ G  +P+ TSTD+VLTITKHLRQ+GVVGKFVEFFG GVA LSIADRATI+NMCPEYGAT  FFPVD++S+ YL Q+GR EE +KYI+ Y++A  +FRD+ +P QDP FT++VELDL +VVP CSGPKRP D+V VS+MK DF SCL  K GFKGF +  E       FIY+  E+TL HGSVVI++ITSCTNTSNPSVMLGAGLLAKKA+++GL  +PYIKTS+SPGSGVVTYYL+ESGV  YL QLGF +VGYGCMTCIGNSGPLPE V E I + DLV  GVLSGNRNFEGR+HP TRANYLASP LVIAYA+AGT+ IDFEKEP+G   +G++VFL+DIWP+R EIQ +ER+ VIP +F+EVY KI+T N +WN L T +  L+ W S STYI+ PPFF  +TL +   +SI +A VLLN+GDSVTTDHISPAG I+R SPAARYL   GLTPREFNSYGSRRGN  VMARGTFANIRL+N+F+NK  P+T H PSG+ +D+FDAAERY +    LI+LAGKEYG GSSRDWAAKGP++ GIKAV+AESYERIHRSNL+GMG+ PL+YL G+  ++LGLTG+E +TI  PENL     V VK+D G++FQ   RFDTD+E  Y+ NGGILNYMIRK+A
Sbjct:  207 HTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFEKEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSKSTYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQAPQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPENLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGGILNYMIRKMA 888          
The following BLAST results are available for this feature:
BLAST of TCONS_00001022 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACOC0.000e+068.91Cytoplasmic aconitate hydratase OS=Homo sapiens GN... [more]
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