TCONS_00001016 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001016
Unique NameTCONS_00001016
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2945

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001016 ID=TCONS_00001016|Name=TCONS_00001016|organism=Clytia hemisphaerica|type=transcript|length=2945bp
aatagctcatgaaaaaaataaaagcagTCTATCATGCTGTGAACTGTGTA
CAAGAAAAGACACCAACATGTTGCTATAAAACATAAAGACAGTGAATCTT
GAGATAAATCATTGACTGTGACTGATACAACACAATACACATATACACCA
ATCAATATATCTTGGACATTCACTTTAACCAAACCATATAATCTTCATCA
TGGGCCAAAAATACTCGGTTATAAAGGATTTAACCAGGGAGGTTGAAAAA
TATGAAAGGGAAAAGCGTCAATATGAGAGGGAACAGGCATACAAGTCTGG
TGCATTCAACAAAGACAGACCTCGATCTTCAAGAGCTAGTGATGTTTCGT
CCATTCATCCTACTCAATCGTTGTATCCTGACCTCAAAGAACTGGAGCAA
GATGATACTGATGCACCTAAAGTAGACTCTCCTGTCGAAACTAGCACTCC
TGCACCGGAAAGTGATGAAGAGAGTGTCTCTGTTTTAACAGAAACTTACT
CAGAAGATGTCAAGGAAGCCAGTATTGTTGCAGAACCAGCGGAAAGCACA
ACTGTGGTATTAGTTAGTGCTTCAAGTAGTGAAGCTGGCGAACCAGTAGA
TGACATTGATGAAGTACCAAAAGAGAAACCTGTATTACCACTCACACCTG
AATTACTGGCTGAACGAGAAGAATCTTCTGATGTTTCCCCAGCTGCTGAT
ATGGAGGATCGCCCACCTGCATATGATTGCCTAGTTCAAAACACAGAAGA
TACACCACCTCAATCACCACACTATGTTAATCTTCAAACTCTATCTTCTC
AAAAAGAACTTGATGATATTCCAATTGAAACTGAACCGGTTTCAGATACA
GAGGAAGATACAATCGAAGACCTCCCACCTCCACCAACTATTCCACCTCC
AGCAGCACCAATTCCTTCAACCATCCTTGAAGAAGAAGAACCTACTGAGG
AGCCTGCTCTTCCAGTTGTTGAAGAAGTTGTTCCAGTAGTGAAGGCTCCT
ACAGAAGAGGCTGCCCCAGTCAGTGAGGAACAGGCTGCCCCAGTTGTTAA
GGAACAGGCTGCCCCAGTCATTGAGGAATTGGCTGCCCCAGTTGTTGAGG
AGCCAGCTGCTCTAATTGTCGAAGAGACAACCACCCCAGTTGTTGAGGAG
CCAGCTACCCCAGTCATTGAGGAGCCAGCTACTCCTGTCGTTGAGGAGCT
AGCTACTCCTGTCGTTGAGGAGCTAGCTACCCCAGTCATTGAGGAGCCAG
CTACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAACCAACT
ACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAACCAACTAC
CCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAACCAACTACCC
CAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAGCTACCCCA
GTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAAGCAGCTACCCCAGT
TGTTGAGGAACCAGCTACCCCAGTTATTGAGGAGCCAGCCACCCCGGTTA
TTGAGGAGCCAGCCACCCCGGTTGTTGAGGAGCCAGCCACCCCGGTTGTT
GAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTCGTTGA
GGAGCCAGCTACCCCAGTTGTTGAGGAGCCAGCTACCCCAGTTGTTGAGG
AACCAACTACCCCAGTTGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGAG
CCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCC
AACTACCCCAGTCGTTGAGGAACCAACTACCCCAGTCGTTGAGGAGCCAA
CTACCCCAGTTGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAACT
ACCCCAGTCGTTGAGGAGCCAGCTGCCCCAGTTGTCGAGGAAACATCTAT
TGAGGAAACAAGTCTTGATGAAGAACCAGCAGTTAATGATGAAAAAGAAC
CTGAAGTTGTTCTTCTGAAAGCTGAAGAAGTGGGGGATGCTGATGAACTT
CCTGTAATGAAAGTTGAGGAAGTCGGACAGTCTGATGAAGCAGCTGATAA
AACTGAGAACACTTTGTTAGATGCAACGAATGTTTCTCCAATGCCAGAAC
CGGAAGAGTTCGACGATAACCCTACATATTTCATAAAAGTTACTGAGGCT
AAATAAATCCAAACGAacatttttaagtatttttaaaGCTTTACTATGCA
AAATAGAAATTTCTAGTTTTATACAGAGTATATATTGATAACTTCTTTAA
AGTTTCAGGCCGTTTTTTGAATTTGGAATGTATGAGAAAGTTATCGGTAG
TTTtccttttcctgaatttttgtaacagagaattttcttttcatttgccA
TTTTTCGTGAATCAGTTTTCGAGGTATTTGTAACAATGTTTTAGTATTTG
TTTTTATCCTTTGAACTTTGTCATGGTAGGATGTTTTTAACATACCGTAT
cagtaaattatttttttagtatCATGTATTTATTAGTATTTTCATGTTCA
GTTCCCTCGATTTTCGCTAGTAGTTttcattttaattctttttccgatgg
ttttttttggtccttttttTCAACAACGCAGAGGCTTTATTGGAGTCGAA
CAGAATATCGTCTCTATGCGagttcttgaaatttttttcaattactCTAA
CCTTGACCCCGAAACGGGTTTTATCGAGGGTGAGTATTGTTTTACgttga
tttttttaaagttagtGATTCGCGAGAATTAGTCCTGTCGGTACAAAGGG
ATTTACGTATATTTTACATACGAAGCTCATTTGTAATACGGTATTTTCAG
CTCATTTCTTTCAATTAATATAAAAATCATGATCAATTTTGTACATCTTC
GCCTATCGATCTCATTGTTGATATTGTTTTTCCAGATGATTCGAT
Run BLAST on NCBI

protein sequence of TCONS_00001016-protein

>TCONS_00001016-protein ID=TCONS_00001016-protein|Name=TCONS_00001016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=668bp
MGQKYSVIKDLTREVEKYEREKRQYEREQAYKSGAFNKDRPRSSRASDVS
SIHPTQSLYPDLKELEQDDTDAPKVDSPVETSTPAPESDEESVSVLTETY
SEDVKEASIVAEPAESTTVVLVSASSSEAGEPVDDIDEVPKEKPVLPLTP
ELLAEREESSDVSPAADMEDRPPAYDCLVQNTEDTPPQSPHYVNLQTLSS
QKELDDIPIETEPVSDTEEDTIEDLPPPPTIPPPAAPIPSTILEEEEPTE
EPALPVVEEVVPVVKAPTEEAAPVSEEQAAPVVKEQAAPVIEELAAPVVE
EPAALIVEETTTPVVEEPATPVIEEPATPVVEELATPVVEELATPVIEEP
ATPVVEEPTTPVVEEPTTPVVEEPTTPVVEEPTTPVVEEPATPVVEEPTT
PVVEEPTTPVVEEPATPVVEEPATPVVEEAATPVVEEPATPVIEEPATPV
IEEPATPVVEEPATPVVEEPATPVVEEPATPVVEEPATPVVEEPATPVVE
EPTTPVVEEPATPVVEEPTTPVVEEPTTPVVEEPTTPVVEEPTTPVVEEP
TTPVVEEPTTPVVEEPTTPVVEEPAAPVVEETSIEETSLDEEPAVNDEKE
PEVVLLKAEEVGDADELPVMKVEEVGQSDEAADKTENTLLDATNVSPMPE
PEEFDDNPTYFIKVTEAK
Run BLAST on NCBI

transcript from alignment at sc0000007:743092..751470+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001016 ID=TCONS_00001016|Name=TCONS_00001016|organism=Clytia hemisphaerica|type=transcript|length=8379bp|location=Sequence derived from alignment at sc0000007:743092..751470+ (Clytia hemisphaerica)
aatagctcatgaaaaaaataaaagcagTCTATCATGCTGTGAACTGTGTA CAAGAAAAGACACCAACATGTTGCTATAAAACATAAAGACAGTGAATCTT GAGATAAATCATTGACTGTGACTGATACAACACAATACACATATACACCA ATCAATATATCTTGGACATTCACTTTAACCAAACCATATAATCTTCATCA TGGGCCAAAAATACTCGGTTATAAAGGATTTAACCAGGGAGGTTGAAAAA TATGAAAGGGAAAAGCGTCAATATGAGAGGGAACAGGTAAATGACCtatg tttgaaaatttcaacatcaaaCTTCCAGACATTGGggtttttttattatt cttaATATCATttcatatctttttaaatcATAGGTAATCTTATTATTGTA GTATTGTGTGTTATGATTAaactttagaaatttttataaaagtaacTTTA CTTTTATAAAAGGTGTTAATCTATAGATCTACATGTTCTTGTTTTACTTT TGAGATTACACAACAAGACGCTTCCAaatgtattttgtttttattttatt gtaatAGCTGtctgataaaaattgaaatttgacctGAATAGTGTTTGTTC AGTGTGATAGCCAACTGAAACGACATCCTGTGTATTGTAATTTTCTTTAA AGAGGCAATAAATCATAACTAAGTGGCTCCCCTTACTTTTAATTGATAGT ACTTAATGAACTGAATCATATGTATTACCCTACCAATAATTAATACAATT TCTTTTGCTTATTCCGATTGATttaataaagagaaaaatacaaggaaaac attttatttttactacAGGATCTCTTCAGTTAAGGAAACTCACCATGACA CCACATTTCCTGCCGCAAAGCCAAATTGCCGAACAATATCGTTCTTGTTT CCTTTAACCAATGCAAAATTTGTTTATATTACACTTTAGGCATACAAGTC TGGTGCATTCAACAAAGACAGACCTNaatgctctaccactgtactacggt cacATACCTACTACCCCCCTTGGGAGTCAACGCTAGGTACCTTAATTCCA TTAGTTTTTGCGCGCGCAAAAATGAAAGGGGcgcaaaaattcatggaatt ttaAGGTAGTTAACTGAAAATatgatttcactttttaatgaCTCTTTTCT TGTAAAAATCCACTATAGCAGACTACCAACTTAACCGTAATGAGAAAACT TTTTACCATTGGACAAACTTAACACCAGAGCAGACATAATTCAGATTAGT GTGCACTGAATCAGGTATTTGTCTGGTGAACTTGTTCTCAAGAACAAGAA TTTGCATAATGGAACACCAAAAACTCAGGACAGTTTTGTCCAGCGTAATT CAATAAAACTCAGCAGGGTTGTCCAACTTCAAATGTGTATTTTGATGGAA CATATTCAAAACCAAAGATCagaatcagaaaattttgatcCAGAGACTAG AAACAGAAAATTTAGTGAGTTTTAAGTGATTCAAGCTACTTATTTGCAAT GAGAGGCCCCGATATATTATAGCCCTTAAGTAAATTGCACTACCTTTTTG TTTGGCATTTACTCCGGCATTTTTTTGCGTCAATTTCTATGATTCCAATG GAATTTctctgaagtaaacaaaagaaaaaaccacTGGTGTAATTTTTGTG ATTGCAAAACCTTTAGAAGAACGTGATAGTCTATTAAATAACAAATTACT ATCAAACAAAACTGTTGTTATTCTGGTAGtgatttattgaaattattttc ttgCCATTTTTCCTATTCAGTacttttataaaacaaaaaaaattttgccc ccaattttcataagttttttttctgaggTCTTTTATTTAGTGGtttgtat aaaaaaaattggacaATTTTCACACCAGCCATTCAATACTTTTGAagtca tttttttatgaaataaagaattgttatcctttgatattttgatcatttag aagcttcaaaatcttgatttaGATGGATTATcaaaaagtgcttgaaaaat aGATCGATGTGAATTATCAGTAATCATGTATTTTATTAGGTTCATAGAAT TCAGTGAGATTACAGGCTTTAGTAGCTTTAAAGACTTTAAAACATTTACC TCCAGGGATACTCAGAAAATGCAAGTCTTTTGGATCATTTAAAGAAGAAT ATTTATTAATATTAGAGTAATATTAGTTAAAGCTTTAGCTCTTATGGTGA TGAACATCTTTTATTGAAATTATATTGGCTATTGTGATGATAGAAGTTTA TTGATATTACTTTTTGGGGGGGTTTAATTAACTTTTAAGAAGGTGTGATA TTATGAGCtcaaatgtgatttttttcttgCTGGTTGGCTTTTTATAATAA TATCATATCATGTATGAATGCAGTTATTTGGTTTTCTTCTGGTCGTATAT TGGGTTTGtgtgaataattatttttcattttatttgatcaATAATTTAAT CACTTATAATGATGGCTCAGATCTGTTGTTCagcattttttgtttatctt tttttctttatttattttaaaatagctcatgaaaaaaaataaaagcagTC TATCATGCTGTGAACTGTGTACAAGAAAAGACACCAACATGTTGCTATAA AACATAAAGACAGTGAATCTTGAGATAAATCATTGACTGTGACTGATACA ACACAATACACATATACACCAATCAATATATCTTGGACATTCACTTTAAC CAAACCATATAATCTTCATCATGGGCCAAAAATACTCGGTTATAAAGGAT TTAACCAGGGAGGTTGAAAAATATGAAAGGGAAAAGCGTCAATATGAGAG GGAACAGGTAAATGACCtatgtttgaaaatttcaacatcaaaCTTCCAGA CATTGGggtttttttattattcttaATATCATttcatatctttttaaatc ATAGGTAATCTTATTATTGTAGTATTGTGTGTTATGATTAaactttagaa atttttataaaagtaacTTTACTTTTATAAAAGGTGTTAATCTATAGATC TACATGTTCTTGTTTTACTTTTGAGATTACACAACAAGACGCTTCCAaat gtattttgtttttattttattgtaatAGCTGtctgataaaaattgaaatt tgacctGAATAGTGTTTGTTCAGTGTGATAGCCAACTGAAACGACATCCT GTGTATTGTAATTTTCTTTAAAGAGGCAATAAATCATAACTAAGTGGCTC CCCTTACTTTTAATTGATAGTACTTAATGAACTGAATCATATGTATTTAC CCTACCTATAATTAATACAATTTCTTTTGCTTATTCCGATTGATttaata aagagaaaaatacaaggaaaacattttatttttactacAGGATGTCTCCA GTTAAGGAAACTCACCATGACACCACATTTCCTGCCGCAAAGCCAAATTG TTGATCAATATCGTTCTTGTTTCCTTTAACCAATGCAAAATTTGTTTATA TTACACTTTAGGCATACAAGTCTGGTGCATTCAACAAAGACAGACCTCGA TCTTCAAGAGCTAGTGATGTTTCGGTTAGTTGCATAGTCAAAATTGaaca atttttaatttataaataTTACGATCACCATAAACGAGACAGCACTTCTA AAGCAATATAAAGggaaaataatagaaatttagaatataatttttttttc tcattaaaaCATGACATTGCTTCCAGTTATTTTCTGTCTGTTCTGCCAGA TGCTTTCTACACAACTTTGCATGTTACATTTCATTAACTGATTCTCGTGA ATTGATTTTTAGTCCATTCATCCTACTCAATCGTTGTATCCTGACCTCAA AGAACTGGAGCAAGATGATACTGATGCACCTAAAGTAGACTCTCCTGTCG AANCTTATTATTCTTAATATCATttcatatctttttaaatcATAGGTTAT CTTATTATTGTAGTATTCTGTAGTATTGTGTGTTATGATTAaactttaga aatttttataaaagtaacTTTACTTTTATAAAAGGTGTTAATCTATAGAT CTACATGTTCTTGTTTTACTTTTGAGATTACACAACAAGACGCTTCCAaa tgtattttgtttttattttattgtaatAGCTGtctgataaaaattgaaat ttgacctGAATAGTGTTTGTTCAGTGTGATAGCCAACTGAAACGACATCC TGTGTATTGTAATTTTCTTTAAAGAGGCAATAAATCATAACTAAGTGGCT CCCCTTACTTTTAATTGATAGTACTTAATGAACTGAATCATATGTATTTA CCCTACCTATAATTAATACAATTTCTTTTGCTTATTCCGATTGATttaat aaagagaaaaatacaaggaaaacattttatttttactacAGGATGTCTCC AGTTAAGGAAACTCACCATGACACCACATTTCCTGCCGCAAAGCCAAATT GTTGATCAATATCGTTCTTGTTTCCTTTAACCAATGCAAAATTTGTTTAT ATTACACTTTAGGCATACAAGTCTGGTGCATTCAACAAAGACAGACCTCG ATCTTCAAGAGCTAGTGATGTTTCGGTTAGTTGCATAGTCAAAATTGaac aatttttaatttataaataTTACGATCACCAAAAACGAGACAGCACTTTT AAAGCAATATAAAGggaaaataatagaaatttagaatataaatttttttt ctcattaaaaCATGACATGCTTCCAGTTATTTTCTGTCTGTTCTGCCAGA TGCTTTCTACACAACTTTGCATGTTACATTTCATTAACTGATTCTCGTGA ATTGATTTTTAGTCCATTCATCCTACTCAATCGTTGTATCCTGACCTCAA AGAACTGGAGCAAGATGATACTGATGCACCTAAAGTAGACTCTCCTGTCG AAACTAGCACTCCTGCACCGGAAAGTGATGAAGAGAGTGTCTCTGTTTTA ACAGAAACTTACTCAGAAGATGTCAAGGAAGCCAGTATTGTTGCAGAACC AGCGGAAAGCACAACTGTGGTATTAGTTAGTGCTTCAAGTAGTGAAGCTG GTGAACCAGTAGATGACATTGATGAAGTACCAAAAGAGAAACCTGTATTA CCACTCACACCTGAATTACTGGCTGAACGAGAAGAATCTTCTGATGTTTC CCAAGCTGCTGATATGGAGGATCGCCCACCTGCATATGATTGCCTAGTTC AAAACACAGAAGATACACCACCTCAATCACCACACTATGTTAATCTTCAA ACTCTATCTTCTCAAAAAGAACTTGATGATATTCCAATTGAAACTGAACC GGTTTCAGATACAGAGGAAGATACAATCGAAGACCTCCCACCTCCACCAA CTATTCCACCTCCAGCAGCACCAATTCCTTCAACCATCCTTGAAGAAGAA GAACCTACTGAGGAGCCTGCTCTTCCAGTTGTTGAAGAAGTTGTTCCAGT AGTAAAGGCTCCTACAGAAGAGGCTGCCCCAGTCAGTGAGGAACAGGCTG CCCCAGTTGTTAAGGAACAGGCTGCCCCAGTCATTGAGGAATTGGCTGCC CCAGTTGTTGAGGAGCCAGCTGCTCTAATTGTCGAAGAGACAACCACCCC AGTTGTTGAGGAGCCAGCTACCCCAGTCATTGAGGAGCCAGGTACTCCTG TCGTTGAGGAGCTAGCTACTCCTGTCGTTGAGGAGCNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTTTTTTCTCATTAAAACATGACATGCTTCCAGTTA TTTTCTGTCTGTTCTGCCAGATGCTTTCTACACAACTTTGCATGTTACAT TTCATTAACTGATTCTCGTGAATTGATTTTTAGTCCATTCATCCTACTCA ATCGTTGTATCCTGACCTCAAAGAACTGGAGCAAGATGATACTGATGCAC CTAAAGTAGACTCTCCTGTCGAAACTAGCACTCCTGCACCGGAAAGTGAT GAAGAGAGTGTCTCTGTTTTAACAGAAACTTACTCAGAAGATGTCAAGGA AGCCAGTATTGTTGCAGAACCAGCGGAAAGCACAACTGTGGTATTAGTTA GTGCTTCAAGTAGTGAAGCTGGCGAACCAGTAGATGACATTGATGAAGTA CCAAAAGAGAAACCTGTATTACCACTCACACCTGAATTACTGGCTGAACG AGAAGAATCTTCTGATGTTTCCCCAGCTGCTGATATGGAGGATCGCCCAC CTGCATATGATTGCCTAGTTCAAAACACAGAAGATACACCACCTCAATCA CCACACTATGTTAATCTTCAAACTCTATCTTCTCAAAAAGAACTTGATGA TATTCCAATTGAAACTGAACCGGTTTCAGATACAGAGGAAGATACAATCG AAGACCTCCCACCTCCACCAACTATTCCACCTCCAGCAGCACCAATTCCT TCAACCATCCTTGAAGAAGAAGAACCTACTGAGGAGCCTGCTCTTCCAGT TGTTGAAGAAGTTGTTCCAGTAGTGAAGGCTCCTACAGAAGAGGCTGCCC CAGTCAGTGAGGAACAGGCTGCCCCAGTTGTTAAGGAACAGGCTGCCCCA GTCATTGAGGAATTGGCTGCCCCAGTTGTTGAGGAGCCAGCTGCTCTAAT TGTCGAAGAGACAACCACCCCAGTTGTTGAGGAGCCAGCTACCCCAGTCA TTGAGGAGCCAGCTACTCCTGTCGTTGAGGAGCTAGCTACTCCTGTCGTT GAGGAGCTAGCTACCCCAGTCATTGAGGAGCCAGCTACCCCAGTTGTTGA GGAACCAACTACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGG AACCAACTACCCCAGTTGTTGAGGAACCAACTACCCCAGTCGTTGAGGAG CCAGCTACCCCAGTTGTTGAGGAACCAACTACCCCAGTCGTTGAGGAGCC AACTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAG CTACCCCAGTTGTTGAGGAAGCAGCTACCCCAGTTGTTGAGGAACCAGCT ACCCCAGTTATTGAGGAGCCAGCCACCCCGGTTATTGAGGAGCCAGCCAC CCCGGTTGTTGAGGAGCCAGCCACCCCGGTTGTTGAGGAGCCAGCTACCC CAGTCGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAGCTACCCCA GTTGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAACCAACTACCCCAGT TGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCG TTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTT GAGGAACCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTTGTTGA GGAGCCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGG AGCCAGCTGCCCCAGTTGTCGAGGAAACATCTATTGAGGAAACAAGTCTT GATGAAGAACCAGCAGTTAATGATGAAAAAGAACCTGAAGTTGTTCTTCT GAAAGCTGAAGAAGTGGGGGATGCTGATGAACTTCCTGTAATGAAAGTTG AGGAAGTCGGACAGTCTGATGAAGCAGCTGATAAAACTGAGAACACTTTG TTAGATGCAACGAATGTTTCTCCAATGCCAGAACCGGAAGAGTTCGACGA TAACCCTACATATTTCATAAAAGTTACTGAGGCTAAATAAATCCAAACGA acatttttaagtatttttaaaGCTTTACTATGCAAAATAGAAATTTCTAG TTTTATACAGAGTATATATTGATAACTTCTTTAAAGTTTCAGGCCGTTTT TTGAATTTGGAATGTATGAGAAAGTTATCGGTAGTTTtccttttcctgaa tttttgtaacagagaattttcttttcatttgccATTTTTCGTGAATCAGT TTTCGAGGTATTTGTAACAATGTTTTAGTATTTGTTTTTATCCTTTGAAC TTTGTCATGGTAGGATGTTTTTAACATACCGTATcagtaaattatttttt tagtatCATGTATTTATTAGTATTTTCATGTTCAGTTCCCTCGATTTTCG CTAGTAGTTttcattttaattctttttccgatggttttttttggtccttt tttTCAACAACGCAGAGGCTTTATTGGAGTCGAACAGAATATCGTCTCTA TGCGagttcttgaaatttttttcaattactCTAACCTTGACCCCGAAACG GGTTTTATCGAGGGTGAGTATTGTTTTACgttgatttttttaaagttagt GATTCGCGAGAATTAGTCCTGTCGGTACAAAGGGATTTACGTATATTTTA CATACGAAGCTCATTTGTAATACGGTATTTTCAGCTCATTTCTTTCAATT AATATAAAAATCATGATCAATTTTGTACATCTTCGCCTATCGATCTCATT GTTGATATTGTTTTTCCAGATGATTCGAT

Coding sequence (CDS) from alignment at sc0000007:743092..751470+

>TCONS_00001016 ID=TCONS_00001016|Name=TCONS_00001016|organism=Clytia hemisphaerica|type=CDS|length=8028bp|location=Sequence derived from alignment at sc0000007:743092..751470+ (Clytia hemisphaerica)
ATGGGCCAAAAATACTCGGTTATAAAGGATTTAACCAGGGAGGTTGAAAA
ATATGAAAGGGAAAAGCGTCAATATGAGAGGGAACAGGCATACAAGTCTG
GTGCATTCAACAAAGACAGACCTCGATCTTCAAGAGCTAGTGATGTTTCG
TCCATTCATCCTACTCAATCGTTGTATCCTGACCTCAAAGAACTGGAGCA
AGATGATACTGATGCACCTAAAGTAGACTCTCCTGTCGAAACTAGCACTC
CTGCACCGGAAAGTGATGAAGAGAGTGTCTCTGTTTTAACAGAAACTTAC
TCAGAAGATGTCAAGGAAGCCAGTATTGTTGCAGAACCAGCGGAAAGCAC
AACTGTGGTATTAGTTAGTGCTTCAAGTAGTGAAGCTGGCGAACCAGTAG
ATGACATTGATGAAGTACCAAAAGAGAAACCTGTATTACCACTCACACCT
GAATTACTGGCTGAACGAGAAGAATCTTCTGATGTTTCCCCAGCTGCTGA
TATGGAGGATCGCCCACCTGCATATGATTGCCTAGTTCAAAACACAGAAG
ATACACCACCTCAATCACCACACTATGTTAATCTTCAAACTCTATCTTCT
CAAAAAGAACTTGATGATATTCCAATTGAAACTGAACCGGTTTCAGATAC
AGAGGAAGATACAATCGAAGACCTCCCACCTCCACCAACTATTCCACCTC
CAGCAGCACCAATTCCTTCAACCATCCTTGAAGAAGAAGAACCTACTGAG
GAGCCTGCTCTTCCAGTTGTTGAAGAAGTTGTTCCAGTAGTGAAGGCTCC
TACAGAAGAGGCTGCCCCAGTCAGTGAGGAACAGGCTGCCCCAGTTGTTA
AGGAACAGGCTGCCCCAGTCATTGAGGAATTGGCTGCCCCAGTTGTTGAG
GAGCCAGCTGCTCTAATTGTCGAAGAGACAACCACCCCAGTTGTTGAGGA
GCCAGCTACCCCAGTCATTGAGGAGCCAGCTACTCCTGTCGTTGAGGAGC
TAGCTACTCCTGTCGTTGAGGAGCTAGCTACCCCAGTCATTGAGGAGCCA
GCTACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAACCAAC
TACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAACCAACTA
CCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAACCAACTACC
CCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAGCTACCCC
AGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAAGCAGCTACCCCAG
TTGTTGAGGAACCAGCTACCCCAGTTATTGAGGAGCCAGCCACCCCGGTT
ATTGAGGAGCCAGCCACCCCGGTTGTTGAGGAGCCAGCCACCCCGGTTGT
TGAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTCGTTG
AGGAGCCAGCTACCCCAGTTGTTGAGGAGCCAGCTACCCCAGTTGTTGAG
GAACCAACTACCCCAGTTGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGA
GCCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGC
CAACTACCCCAGTCGTTGAGGAACCAACTACCCCAGTCGTTGAGGAGCCA
ACTACCCCAGTTGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAAC
TACCCCAGTCGTTGAGGAGCCAGCTGCCCCAGTTGTCGAGGAAACATCTA
TTGAGGAAACAAGTCTTGATGAAGAACCAGCAGTTAATGATGAAAAAGAA
CCTGAAGTTGTTCTTCTGAAAGCTGAAGAAGTGGGGGATGCTGATGAACT
TCCTGTAATGAAAGTTGAGGAAGTCGGACAGTCTGATGAAGCAGCTGATA
AAACTGAGAACACTTTGTTAGATGCAACGAATGTTTCTCCAATGCCAGAA
CCGGAAGAGTTCGACGATAACCCTACATATTTCATAAAAGTTACTGAGGC
TAAATAAATGGGCCAAAAATACTCGGTTATAAAGGATTTAACCAGGGAGG
TTGAAAAATATGAAAGGGAAAAGCGTCAATATGAGAGGGAACAGGCATAC
AAGTCTGGTGCATTCAACAAAGACAGACCTCGATCTTCAAGAGCTAGTGA
TGTTTCGTCCATTCATCCTACTCAATCGTTGTATCCTGACCTCAAAGAAC
TGGAGCAAGATGATACTGATGCACCTAAAGTAGACTCTCCTGTCGAAACT
AGCACTCCTGCACCGGAAAGTGATGAAGAGAGTGTCTCTGTTTTAACAGA
AACTTACTCAGAAGATGTCAAGGAAGCCAGTATTGTTGCAGAACCAGCGG
AAAGCACAACTGTGGTATTAGTTAGTGCTTCAAGTAGTGAAGCTGGCGAA
CCAGTAGATGACATTGATGAAGTACCAAAAGAGAAACCTGTATTACCACT
CACACCTGAATTACTGGCTGAACGAGAAGAATCTTCTGATGTTTCCCCAG
CTGCTGATATGGAGGATCGCCCACCTGCATATGATTGCCTAGTTCAAAAC
ACAGAAGATACACCACCTCAATCACCACACTATGTTAATCTTCAAACTCT
ATCTTCTCAAAAAGAACTTGATGATATTCCAATTGAAACTGAACCGGTTT
CAGATACAGAGGAAGATACAATCGAAGACCTCCCACCTCCACCAACTATT
CCACCTCCAGCAGCACCAATTCCTTCAACCATCCTTGAAGAAGAAGAACC
TACTGAGGAGCCTGCTCTTCCAGTTGTTGAAGAAGTTGTTCCAGTAGTGA
AGGCTCCTACAGAAGAGGCTGCCCCAGTCAGTGAGGAACAGGCTGCCCCA
GTTGTTAAGGAACAGGCTGCCCCAGTCATTGAGGAATTGGCTGCCCCAGT
TGTTGAGGAGCCAGCTGCTCTAATTGTCGAAGAGACAACCACCCCAGTTG
TTGAGGAGCCAGCTACCCCAGTCATTGAGGAGCCAGCTACTCCTGTCGTT
GAGGAGCTAGCTACTCCTGTCGTTGAGGAGCTAGCTACCCCAGTCATTGA
GGAGCCAGCTACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGG
AACCAACTACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAA
CCAACTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAACC
AACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAG
CTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAAGCAGCT
ACCCCAGTTGTTGAGGAACCAGCTACCCCAGTTATTGAGGAGCCAGCCAC
CCCGGTTATTGAGGAGCCAGCCACCCCGGTTGTTGAGGAGCCAGCCACCC
CGGTTGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAGCTACCCCA
GTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAGCCAGCTACCCCAGT
TGTTGAGGAACCAACTACCCCAGTTGTTGAGGAGCCAGCTACCCCAGTCG
TTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTT
GAGGAGCCAACTACCCCAGTCGTTGAGGAACCAACTACCCCAGTCGTTGA
GGAGCCAACTACCCCAGTTGTTGAGGAGCCAACTACCCCAGTCGTTGAGG
AGCCAACTACCCCAGTCGTTGAGGAGCCAGCTGCCCCAGTTGTCGAGGAA
ACATCTATTGAGGAAACAAGTCTTGATGAAGAACCAGCAGTTAATGATGA
AAAAGAACCTGAAGTTGTTCTTCTGAAAGCTGAAGAAGTGGGGGATGCTG
ATGAACTTCCTGTAATGAAAGTTGAGGAAGTCGGACAGTCTGATGAAGCA
GCTGATAAAACTGAGAACACTTTGTTAGATGCAACGAATGTTTCTCCAAT
GCCAGAACCGGAAGAGTTCGACGATAACCCTACATATTTCATAAAAGTTA
CTGAGGCTAAATAAATGGGCCAAAAATACTCGGTTATAAAGGATTTAACC
AGGGAGGTTGAAAAATATGAAAGGGAAAAGCGTCAATATGAGAGGGAACA
GGCATACAAGTCTGGTGCATTCAACAAAGACAGACCTCGATCTTCAAGAG
CTAGTGATGTTTCGTCCATTCATCCTACTCAATCGTTGTATCCTGACCTC
AAAGAACTGGAGCAAGATGATACTGATGCACCTAAAGTAGACTCTCCTGT
CGAAACTAGCACTCCTGCACCGGAAAGTGATGAAGAGAGTGTCTCTGTTT
TAACAGAAACTTACTCAGAAGATGTCAAGGAAGCCAGTATTGTTGCAGAA
CCAGCGGAAAGCACAACTGTGGTATTAGTTAGTGCTTCAAGTAGTGAAGC
TGGCGAACCAGTAGATGACATTGATGAAGTACCAAAAGAGAAACCTGTAT
TACCACTCACACCTGAATTACTGGCTGAACGAGAAGAATCTTCTGATGTT
TCCCCAGCTGCTGATATGGAGGATCGCCCACCTGCATATGATTGCCTAGT
TCAAAACACAGAAGATACACCACCTCAATCACCACACTATGTTAATCTTC
AAACTCTATCTTCTCAAAAAGAACTTGATGATATTCCAATTGAAACTGAA
CCGGTTTCAGATACAGAGGAAGATACAATCGAAGACCTCCCACCTCCACC
AACTATTCCACCTCCAGCAGCACCAATTCCTTCAACCATCCTTGAAGAAG
AAGAACCTACTGAGGAGCCTGCTCTTCCAGTTGTTGAAGAAGTTGTTCCA
GTAGTGAAGGCTCCTACAGAAGAGGCTGCCCCAGTCAGTGAGGAACAGGC
TGCCCCAGTTGTTAAGGAACAGGCTGCCCCAGTCATTGAGGAATTGGCTG
CCCCAGTTGTTGAGGAGCCAGCTGCTCTAATTGTCGAAGAGACAACCACC
CCAGTTGTTGAGGAGCCAGCTACCCCAGTCATTGAGGAGCCAGCTACTCC
TGTCGTTGAGGAGCTAGCTACTCCTGTCGTTGAGGAGCTAGCTACCCCAG
TCATTGAGGAGCCAGCTACCCCAGTTGTTGAGGAACCAACTACCCCAGTT
GTTGAGGAACCAACTACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGT
TGAGGAACCAACTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTG
AGGAACCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAG
GAGCCAGCTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGA
AGCAGCTACCCCAGTTGTTGAGGAACCAGCTACCCCAGTTATTGAGGAGC
CAGCCACCCCGGTTATTGAGGAGCCAGCCACCCCGGTTGTTGAGGAGCCA
GCCACCCCGGTTGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAGC
TACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAGCCAGCTA
CCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAGCCAGCTACC
CCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAACTACCCC
AGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAACCAACTACCCCAG
TCGTTGAGGAGCCAACTACCCCAGTTGTTGAGGAGCCAACTACCCCAGTC
GTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAGCTGCCCCAGTTGT
CGAGGAAACATCTATTGAGGAAACAAGTCTTGATGAAGAACCAGCAGTTA
ATGATGAAAAAGAACCTGAAGTTGTTCTTCTGAAAGCTGAAGAAGTGGGG
GATGCTGATGAACTTCCTGTAATGAAAGTTGAGGAAGTCGGACAGTCTGA
TGAAGCAGCTGATAAAACTGAGAACACTTTGTTAGATGCAACGAATGTTT
CTCCAATGCCAGAACCGGAAGAGTTCGACGATAACCCTACATATTTCATA
AAAGTTACTGAGGCTAAATAAATGGGCCAAAAATACTCGGTTATAAAGGA
TTTAACCAGGGAGGTTGAAAAATATGAAAGGGAAAAGCGTCAATATGAGA
GGGAACAGGCATACAAGTCTGGTGCATTCAACAAAGACAGACCTCGATCT
TCAAGAGCTAGTGATGTTTCGTCCATTCATCCTACTCAATCGTTGTATCC
TGACCTCAAAGAACTGGAGCAAGATGATACTGATGCACCTAAAGTAGACT
CTCCTGTCGAAACTAGCACTCCTGCACCGGAAAGTGATGAAGAGAGTGTC
TCTGTTTTAACAGAAACTTACTCAGAAGATGTCAAGGAAGCCAGTATTGT
TGCAGAACCAGCGGAAAGCACAACTGTGGTATTAGTTAGTGCTTCAAGTA
GTGAAGCTGGCGAACCAGTAGATGACATTGATGAAGTACCAAAAGAGAAA
CCTGTATTACCACTCACACCTGAATTACTGGCTGAACGAGAAGAATCTTC
TGATGTTTCCCCAGCTGCTGATATGGAGGATCGCCCACCTGCATATGATT
GCCTAGTTCAAAACACAGAAGATACACCACCTCAATCACCACACTATGTT
AATCTTCAAACTCTATCTTCTCAAAAAGAACTTGATGATATTCCAATTGA
AACTGAACCGGTTTCAGATACAGAGGAAGATACAATCGAAGACCTCCCAC
CTCCACCAACTATTCCACCTCCAGCAGCACCAATTCCTTCAACCATCCTT
GAAGAAGAAGAACCTACTGAGGAGCCTGCTCTTCCAGTTGTTGAAGAAGT
TGTTCCAGTAGTGAAGGCTCCTACAGAAGAGGCTGCCCCAGTCAGTGAGG
AACAGGCTGCCCCAGTTGTTAAGGAACAGGCTGCCCCAGTCATTGAGGAA
TTGGCTGCCCCAGTTGTTGAGGAGCCAGCTGCTCTAATTGTCGAAGAGAC
AACCACCCCAGTTGTTGAGGAGCCAGCTACCCCAGTCATTGAGGAGCCAG
CTACTCCTGTCGTTGAGGAGCTAGCTACTCCTGTCGTTGAGGAGCTAGCT
ACCCCAGTCATTGAGGAGCCAGCTACCCCAGTTGTTGAGGAACCAACTAC
CCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAACCAACTACCC
CAGTTGTTGAGGAACCAACTACCCCAGTCGTTGAGGAGCCAGCTACCCCA
GTTGTTGAGGAACCAACTACCCCAGTCGTTGAGGAGCCAACTACCCCAGT
CGTTGAGGAGCCAGCTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTG
TTGAGGAAGCAGCTACCCCAGTTGTTGAGGAACCAGCTACCCCAGTTATT
GAGGAGCCAGCCACCCCGGTTATTGAGGAGCCAGCCACCCCGGTTGTTGA
GGAGCCAGCCACCCCGGTTGTTGAGGAGCCAGCTACCCCAGTCGTTGAGG
AGCCAGCTACCCCAGTCGTTGAGGAGCCAGCTACCCCAGTTGTTGAGGAG
CCAGCTACCCCAGTTGTTGAGGAACCAACTACCCCAGTTGTTGAGGAGCC
AGCTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAA
CTACCCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAACCAACT
ACCCCAGTCGTTGAGGAGCCAACTACCCCAGTTGTTGAGGAGCCAACTAC
CCCAGTCGTTGAGGAGCCAACTACCCCAGTCGTTGAGGAGCCAGCTGCCC
CAGTTGTCGAGGAAACATCTATTGAGGAAACAAGTCTTGATGAAGAACCA
GCAGTTAATGATGAAAAAGAACCTGAAGTTGTTCTTCTGAAAGCTGAAGA
AGTGGGGGATGCTGATGAACTTCCTGTAATGAAAGTTGAGGAAGTCGGAC
AGTCTGATGAAGCAGCTGATAAAACTGAGAACACTTTGTTAGATGCAACG
AATGTTTCTCCAATGCCAGAACCGGAAGAGTTCGACGATAACCCTACATA
TTTCATAAAAGTTACTGAGGCTAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000585XLOC_000585Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001016-exon-sc0000007-1491911889:743092..743332TCONS_00001016-exon-sc0000007-1491911889:743092..743332Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1510915933:743092..743332TCONS_00001016-exon-sc0000007-1510915933:743092..743332Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1575043694:743092..743332TCONS_00001016-exon-sc0000007-1575043694:743092..743332Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1491911889:745854..745898TCONS_00001016-exon-sc0000007-1491911889:745854..745898Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1510915933:745854..745898TCONS_00001016-exon-sc0000007-1510915933:745854..745898Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1575043694:745854..745898TCONS_00001016-exon-sc0000007-1575043694:745854..745898Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1491911889:747554..747616TCONS_00001016-exon-sc0000007-1491911889:747554..747616Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1510915933:747554..747616TCONS_00001016-exon-sc0000007-1510915933:747554..747616Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1575043694:747554..747616TCONS_00001016-exon-sc0000007-1575043694:747554..747616Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1491911889:748875..751470TCONS_00001016-exon-sc0000007-1491911889:748875..751470Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1510915933:748875..751470TCONS_00001016-exon-sc0000007-1510915933:748875..751470Clytia hemisphaericaexon
TCONS_00001016-exon-sc0000007-1575043694:748875..751470TCONS_00001016-exon-sc0000007-1575043694:748875..751470Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001016-proteinTCONS_00001016-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:743092..751470 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.23498e-08 4.55813e-05 0 1.54822e-06 9.2753 7.82922 8.34597 9.83157 4.02852 3.89114 3.27505 2.38375 5.48769 2.6474 0.256976 0.293544 4.95019e-07 4.88825e-09 1.3197e-06 0.296674 2.55623e-08 0.422154 0.388925 0.36493 11.8797 11.8093 8.08616e-07 4.35714e-05 3.00014e-06 7.32816e-06
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001016 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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