TCONS_00001011 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001011
Unique NameTCONS_00001011
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1640

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001011 ID=TCONS_00001011|Name=TCONS_00001011|organism=Clytia hemisphaerica|type=transcript|length=1640bp
AAAAATATTGTACCGGTAATTTACCGGATCATTTTCCGATTAGAATAGCG
GATATAAGCCGGAGCTGCATTCACGAGCAACCATTCCATAAACAAATATG
GCGGCCGTGCAACATGTTCTTTTATCCACCGAAGCTGAACTTCTGGTCAA
AGCTCTCGACGTCAGTTCTCTGGAAAAGGTTGGAGATAAAAGatGGTGGA
ATAGACATGACATGTTAGAGAAGTTGAATATTCAATCAATAATGAACATT
CCATCGAATTCTTGCTTCATAACTGAAAACCTGCTGACTCATGGGAAGAT
TTCATTGGTTATCAACGAGTTGATCACTTCAGAGATTTGGTCGGAAAGGA
TATTTCCTATTTTATACCATGAAATGTCACAGAAAGACCAATCCACACTT
CCTGTCTATATGACTCTTTTCCATGAAGCAACTGTTGCGGGATTGGTTGA
ATCAGTATTCTACTACAAGGAAGTGAGTGAAGAAGCAGGAGACTTTCTGT
TGGATCTTATCGATTATGCGTACCGAAAACTAACCAAACTCATTTCAAAg
cAACACTGTGAAAGTATAACTCAAAAGGACCCCAAAAACgacTTACTGAA
ACAGAATGAGGATATCCAATTTACGATTGCCATGAAATGCATCTCCATAA
TCAAATATATATGTGATGCTATGGATAGtataACATTGAGTGCAATCACA
AGAATTTTGAATACACATGACTTTCCGTACCTGCTGAGTCAATTGATTGA
TCTTGCTCCttggaaaaagagaaaagaaaacgGAGAAGTGGAAATATTCA
CGGATAACAAATGGGTCATAGTACCAAAAGATGAAACTCACTTACTTCCA
AAGATTGAGGGCCAGGTTTGGTTGACACTTTATCAATTGCTTTTACATCC
AGAAGCACAAAGAAAATATGAATACAACCTTCATCGGAAAACACAACTAT
TAAAGCTTCGAAGGTACCTGCACGAACTATTGTTGGATCAGTTGCCGTAT
CTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCGGTGATGGACCCACC
TCCCTCTAAGCAAGACCTCATCATTGAACAGATTCCGGAAGTCCGTAACA
AACTGGAGAGAATGTACGAAGGACGATGGAACAAGATTGCCAAAACACAA
CTTCAACAAAATTTCACCATGAGCAGTAAAGATATGAAAGAGCATGCGCA
AAGATTGGCTGCAACATATGATTTAGACATTCTTGAGAGTCTGATTGATG
AGGCGCCAACTTGTTCAAATTGTCAAAACGAAGCAACAAAGAGGTGCTCA
AGGTGTCAAAATGAGTGGTACTGCTCACGacCATGTCAAGTGAAACATTG
GTCCAAACATAAAGAACTGTGTAACATATTGTCAGCTAAATAATACAGCA
AATTGAAAGAAAGAATGCATAACTCTGGATGCTGACCAGCCTACAACATC
GACTGCCAAGAAGAGAAGGATGTCTTCAACAGCTTCCGCTTTAACAATCA
CACTTTTCGTTTTACACAGTATTGCTATTACGCTTCATTGTCTTGGANgt
tttcttcattttgttgcaagaacttttgaagaatattttggtTTTGGCAA
GTTCGTTGCAGCCTTCCATTTTGTAACATTTTATGTTAAT
Run BLAST on NCBI

transcript from alignment at sc0000007:663051..677968+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001011 ID=TCONS_00001011|Name=TCONS_00001011|organism=Clytia hemisphaerica|type=transcript|length=14918bp|location=Sequence derived from alignment at sc0000007:663051..677968+ (Clytia hemisphaerica)
AAAAATATTGTACCGGTAATTTACCGGATCATTTTCCGATTAGAATAGCG
GATATAAGCCGGAGCTGCATTCACGAGCAACCATTCCATAAACAAATATG
GCGGCCGTGCAACATGTTCTTTTATCCACCGAAGCTGAACTTCTGGTCAA
AGCTCTCGACGTCAGTTCTCTGGAAAAGGTTGGAGATAAAAGGTATACTT
AGAAATTCAATGACTATCAAAAGGATAACTTTTTCCCTTGGATTTATATT
TCCCCTTGTCAGAGATCTTCTACTTCTGCGCCAGCACACGACGGGCTTTC
CAGTACACAGGTTAGCGTTTTCCTNGCGCCAGCACGGTGGGCTTTCCAGT
ACACAGCACAGGTTTTCCTGGGCTGGGGGTTCCCTTTATCTCCCCATGGA
TTTATTATGTTTCCCTTGTCAGAGATCTCCTGCTTTCTAGGAGCTTTCCA
GGTTTACCGGCAGGTTTCCTTGATCCCCCTTGGCTGGGTTTCTATTTTCT
GGTATATATAGAGGTTTCTTGCATGCCACAAGCCttttagcaactccaga
agatttttcaaatttcaattttttttaaaacctatcctatcttgtagagc
tttgaaaaagaaagaaaatgaggggtcataggccttcagaggataagtgg
ttgtaaagatattcaaattttagtgtcaaaaatttgactaaaaatgtcaa
aaaaaggttagaaaaatagcttggaaaaattcgaaaaatgtgtcaaaaaa
gaaaaaaaagaaattttccccAGTCATGCctcttcaattttgcatatctc
tttttctagtgtagctagaaaCCTGAAATTTGAAGGGAAAATTCTTTGAT
TGCGTTAGAATAttaatatataaaaatatttgtaaaatatttagtatcaa
aataacgaaagatatatttttttggaaaaaagaagacattgcattgtttt
attttagtttttgaagaaaagtagcttgggaaaagttgaaatgagtcaaa
aaaggtggtaggacccattttcaaggtgcctctggaaatggaggaacaaa
aacttatgagtaaagcaagaataagtttttctgaaaggagaaaccccaaa
tgaaaagaaaatccatttcggcagaaataaaaacttttttttcggacatt
cccatgcaaaagaagcaaaaaagtgataaaaactacatgaaaatgaaaga
actaaaaaattagcaaatgtgatttttgaattcctcaccctttttctgat
aaacatacaaagtttcagccttcaaatacattttcctccgtttccagaca
catttgttcatTGATAGTTGCAATTTTTTTTtctcccgtcggcaaacaat
tttcaaaatgttgcaaaacattctgcattttaccaatttgccgtctagca
cgtgtccacagtgttatataccgctggaaagctaagatcacgggctttca
tttagtaaaaaaacGGAatgctttagcatacatagaaaaaagttccaagg
gttcaaattttacagaaaaatgaaacatttggtttgacgtcaacgtgTAA
CACTTGTGGCGACAAAAACGCGTATAAAACGCGAGTGTATTGCCCTATCT
ACACCGTAGCAGATAAACATTTATAATGTAGCACGGGCTTTAATATTCCT
AATTAGAACTAACGTGCCTAATTAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTTACTTATGGCGTCA
TTTTGAAGCCCTCCgcccaaattttgttttgatttttggctcaATATATC
ATCTTTGACCTGCTCTATCTATTGCTCATAGTTAGAATTTGCGGATTTTG
TTTGTTGGTGAAGAAtctgaatttttaaaaaatcatattcttaattagga
ttgaaaaacaaagggataatcctaattaagaaagtccgtgcgatcaaaaa
aaaatttgcttaatTAGAATAGAACTCCTGACTGACAAGGCACAGCCGGT
TTATAGGTTTTTTCCTCTGTGGTTAGTTTCTATAGATTCATCCTCTCTAG
TCGCAACAACATGTCTTTCATAGAAGAACAGTAAAGTCTCTAGTGGGATT
TCTGAATAGACTTTACACGCTGTCTCTGTCTCggtaggcctccagaggat
aggTACGCTaagtagcgactccagaagtcatgcaacttttgttgacatca
aaccaaatgtttcatttttccgtgaactttgaacccttcgaacttttttc
tatgtatgctaaagcgttcttgtttttaccaaaagaaagcccgtgatctC
CGCTTTCCAGCTGtaatataacactgtggacacgggttagacggcaaatt
ggtaaaatgccgaacgttttgcaacattttttaaattgttttccGACGGG
AGATAAAAAAATTGCAACTAGCAatgaacaaatgtttctggaaatggagg
aaaatgtatttgaaggctgaaactttgtatgtttatcagaaaaagggtga
ggaatttaAAAATCACATTTgctaattttagttctttcatttgcatgtag
tttttttttacttttttgcttcttttgcatgggaatgtcccaaaaaaaaa
attgatttcttccgaaatggattttcttttcatttggggtttctccttaa
agaaaaacttattctttacttataactttttgttcctccattttcagagg
ccccttgaaaatgggtcctaccaccttttttaactcatttcaaccttttc
caagctacttttcttcaaagacaaaaataaaacattgcaatgtgttctat
tttcaaaaaaagatatatcttttgttattttgataaatatactaaatatt
ttacaaatatttttatataaataatAGTATtgtaacaccatcaaagaatt
ctccctccaaatttcaggtctctagctacactagaaaaagagatatgcaa
aattgaagaagcatgactagaaaatttcttttttttcttttttgacacat
ttttcgaatttttccaagctattttcctaacctttttttttacattttta
gtcaaatTCTTTACactaaaatttgaatatcttcacaaccacttatcctc
tggaggcctttgacccctcattttctttctttttcaaagctctacaagat
aggataggtttttaaaaaaattgaaatttgaaaaatcttctggagttgct
acgcTAGGCGAAGGGAAGTTAGGTATTAGTTTACCGTTACAATGAATTCA
AAATTCGAtgcggcaaaatttcattattcattattcattattttactAAC
TCTCCCACGCGCTGCAAGTGTACCTGTACTATTAAGTTATACCCCTTCGA
TATATATTACCCGAGGATAAAAATGCTTCTTTTCGAGGCGTGTGCCCTCA
TATCCTTTGTTTCACATTGGGCGCGCTGGTCCTAGGTCACTTGTTTGACA
GTACACTTGTGCGGCAGCTCAGTTGTTCAACATTTTAGCaaaattgtcga
acaactgTATTGTCAACTAACTGGGAAGATCTGTTGTTAGACTTACCAGT
CGGTTGGTTTGAAACGCAGGACGCAGGACAGGGTGTGTACATCAGTTTTa
acaaaatgcttttttcatgATCAATATGATGCTAACGgtgcaagtggata
tagattgatatattttgaaaacattaaatgctccaaaagggctgttttag
agatatgaagaaagtgacgtcattttcatcaaaaatacgaggcaggggat
aaaaatattgatatagtTATGAAATATGTACTTTTGACTGCCTTTAACGc
cattttaatcaatttttgttatcatacccaaggtgatgcaggagatataa
tgagatatgatatagcgattgtgaaatagctatttccCTGCCAGGAGGCT
GTTTAAAGATGAcataaatatatatatatataacacGTGTACTTTGGATA
TAACATATGTAACATACCAatgacattgaaaagataacttcTATTATACA
TGCGTGATTTGtgtgtaatatataataaaacacgTGGTAGGCACGTGGAT
agattttgacctttaaaaaggTTCCAGATCAACCTTCAGAATGATATTTC
TAACAATTACAATTGTTTTTAAacattctcttctttttttacaTAAATTA
AAACTGACCTGTCAGCAttgacctgcgtcctgtgtcctgtgtCTTGTGTT
TCGAACCAACCGCTTCCCAGTTGGTTGACGCttacttgttcgacaatata
tCGATATAAAAGTCAAACAACTGGGATGTCTAACAAGTAAGCGTCAAGTT
GTTCAACATGTAAGTTGTTCGACAATACAGTTGTTAGACAATTATTTGTT
TCCGCTCATTTTCTTCTCAAAGCTTAGATGGTAGGTACTAATCGGATTAA
TCTTCGCCTTCTTCGCCAAATGTATCCACGCGGAATTTTCGAGATCAGAC
TTTTGGGTAAACCGGGCTTGTAAATATGGTGTTTATGTGACGAAAATTGC
TTTTAAATTCTactcatgtaaatgggtcagtgtttgaagTCCGGCAAGAT
TTCCGGGGAAAAAGCCTATCCTGCGGtgtgcggatctaggtgggtttgGT
CTctcccgtagatctttttcttgggaagttgatcttcaaattagttttca
acgTTGGCTTGGCtccaattttttcatttatggctcaaattttaggtaat
ttctcatagtttttgaaaatattaatttctataaaaagtgccgggttatt
tttttgtgattccctttagaagttttgcagcACATTTATTTGCctgcgag
tcaagtaaacgcTATAGCGCTTTTGCAGTATTAATCTTTGATGCGCATTT
CGGTGGGACGCTAATATGACTAACTGTCAAGTATGAATAACTGTTAATgg
gaatcaaaattataaagtgcacttacaaacatcaatatatcagatttaac
aaaattaataacgacactgtcatcattgacaataaagcaaaagattttct
gtcaagagccttgtaaacattgcAACAAcctccatcgaaatgatctgccg
cagctaagtctaccattttagcgcggtccaAGGATTGAGCAGAGAACACT
CACAGAACACCCGCAAGCTCCCgtgcgggtgaaaaactttaatctgtcag
TCATTTTCTCAATTGAAGAGTACgagaagcgattctagctttacaatagt
gccgcggatcattagtggatagtattcaattatcattatccctttatttt
cattcctagaacttttgcaaaaaaaaaaggatcttttactgctctattca
catactgaatttgaaagatcttctatgtggcgttttttttgcaaatttca
aaaaactgatttttgtcctgcttttgcgggactttagcttaagtgcttgc
atGCAGCATCTAGGCTCCAAATATACGTGTTTCCCGTAATtcttgtatga
agagttaggtctatactgccatagatgaaaaaatttgagccaagccaacc
ttgaaaactaatttgaaaatcaacttcccaagaaaaagatctacagggga
gacggaacccacctagatccgcgcaccaccggataggctatttcctggaa
attttcccggacctcaaacactgaccaatttacatgtgcggaattatttt
ttctttagcatataaacaaggccttaaattaaaaattgaagcaatgtcag
ggaattgaatgacaaagttTGGTTGGTTAATATTCTGGATGCTGCACATT
TGCAATaggtcattttgtctcattttaagttttcaagttttaattaattg
ttttgGGAActaacttgaacttgattcaggtaactctcatccttgttgtg
gcAAATActtcctgtagatgactgatgttgttttttctgaaagcttgatt
tcctagtgtgactaactgacagtCCGACCaactgataatttttttaactt
ttccaaatcttttgagTCAGAGAGACGcaaaattgttgaaattttaTCCA
ATTCCATAATATCCAACCCAAAACAAATATTAAGCACCTAAATAGCAGAG
TCATGGCTGtattccttttttataagaacaccttAACCTGCAATTGTAGA
AGTGATCTTGCAATTGAGGTGTGTGCCTTTGTGGATCCAAACTTAGGTAT
TTCTTTATGTTTGCGGTTTGGATTCTAGGATTGTGCGATTGCTtgaaaaa
ttgaggtttttggtgggaaaattAAACAAAGGTTCAAATTTCAGCTACCA
ACCGTCCGACCcattttttaagcatttaggacacgaaccaaacattcaat
tgggcctggcccaAAACAGAGATACcccatttgaaaaaaagaaggaaGCA
TGGTAGCCCATACACAAAAGGGTCACGAAAAATCAAGAAACATAAATTAT
TTCCATGCGAAAGtgggttttaaatttttttaaagattgacaCTGTCATG
ATTTCCTCTCCAATATGCTAATTCCTACATTTCCCCCCTGAACATTCACT
TTGGTTGTTCTTATTGAACTTCAAATAGAAATATCTTCTCAATTAAACCT
AATTATGTGTATCATTCCCTAAGGGAAGGGGcattttaaagaaggaaaag
tgTTATTTATTTTAAGTAATATGGTAAGGAAGTTTCAACTGAAGCTTGTT
GGTCGCAATCCTTTTAAAGCTTGGGTGTCGGTGGGGGCTTTTGAGATTTT
CAGAATGTAGAAAACTAAATTCAATTGAATTACTTGGATGGTTGGTACAA
AATTTATCTTCATTCTGTtataatgtttttctttcagatGGTGGAATAGA
CATGACATGTTAGAGAAGTTGAATATTCAAGTATGTTTAAAGTTTCCAAA
TTTAGAATCATTTTGGTTTATCCttctaactttttattttgttagtTATA
GTAAAATTTGAATGAATACACTGGAATACCCCGCTGAACCCTGGGGTTGG
GTTAATGCCAAAGCATACAAGAGggtacaagggggaggggtgGTCAATCT
TCATCGATTCTGAGCatacatactttttgaatggtcccaaagaaaatttt
taagaatttatgaACAAAATCCTATAAATGGGTGTATAATTCAAGAAATG
CACTAAGATGAACTCTGGTTTCTATTTGAATTCTCAACATCATCTCAATT
ATATATCTCTTTTTAGTCAATAATGAACATTCCATCGAATTCTTGCTTCA
TAACTGAAAACCTGCTGACTCATGGGAAGGTAAATgtttatttgtaaaaa
ttaaTTAACCACTTACTGACACTATCATCTTATGTGAaggattttcttaa
aatttgaatCCATTTAAACGTTCtagaaaatcttcaaagatctttttttt
ctctccAGGTTTCTCTAATTCTTAGTTAGCTATTATCAAGCTGTTATCTT
TATCAAATTATTAAGAAATTTTCTTGCCTTCGTGGGATTTATCAATGTTT
ATTTCATGGGATCATTTTAGATTTCATTGGTTATCAACGAGTTGATCACT
TCAGAGATTTGGTCGGAAAGGATATTTCCTATTTTATACCATGAAATGTC
ACAGAAAGACCAATCCACACTTCCTGTCTATATGACTGTATGTTTTTTTG
ATATCATTCTTGAATACAGCAATTTACAGCTATTCTTTTGCTTTCACAAT
ACTTTTCACTATTTTCAGCATTAGATTGAAAGTGTGATAGCTATGGTTTT
CATAAAATGTTATGGTATGTTATTATTTTAGCTTTTCCATGAAGCAACTG
TTGCGGGATTGGTTGAATCAGTATTCTACTACAAGGTATTTAGACTTCtt
cctgaattttcaaaatatacttCTTTGTCTCATTGACACTACTATGACAT
TGCATAGTTTTTTTGCACATTTACACCGACATATGTTTTTTTAGGAAGTG
AGTGAAGAAGCAGGAGACTTTCTGTTGGATCTTATCGATTATGCGTACCG
AAAACTAACCAAACTCATTTCAAAGTACGTATCATTTCTGTATATATATG
TGACTTTTTGGAACAAGCAAGTTAATTGATCAATAATGATCTGATAAGGT
ctcttgtttttaacattttaggcAACACTGTGAAAGTATAACTCAAAAGG
ACCCCAAAAACGTAAgataattgattttctttaagaTATCTTGAATGATT
ACAAGAAGTAAAAATCGATGACAAGTTAAccaaaatttgtatttttcagg
acTTACTGAAACAGAATGAGGATATCCAATTTACGATTGCCATGAAATGC
ATCTCCATAATCAAATATATATGTGATGCTATGGATAGGTAAGtgtcttg
tttttcttttacttttaaaactTCTAATACAGGAGAATGGTAATCGGTAT
AATATCGGTAAAATATTAATTTGTTCACTCGAcctctatttttttttcag
tataACATTGAGTGCAATCACAAGAATTTTGAATACACATGGTATGTTAG
CAATTATGAAAACATTTGATTACAGTGGCTGTATCTACTTTTGTTTTTAT
GAATCAGTTTTTTTCTTGATTAGGCATCATATTATTTATTGAACATAAAC
TTCTGTTGTAGACTTTCCGTACCTGCTGAGTCAATTGATTGATCTTGCTC
Cttggaaaaagagaaaagaaaacggtgagtttacaaaataatttttcatt
cgtTAAGGGCGTCATTTAAAGTATCTGCTACAATTTGCTTACAcaacatt
tttaaacaaaaaaaaacgactTTTTCTCCTTTCGGCGCCCTGCgtgaata
aatttgaaaaattcttttgtttattctataatgtcagcatagaggcgcgc
cttctttcaatttcataaaagtaTCTTCAATCGGTTCGCAATCATAGTGT
TTGTGTTTTGCTTTTATTAAGTTACACAACATATCACTCTATTTTTCTTA
CATACCGTAGGAGAAGTGGAAATATTCACGGATAACAAATGGGTCATAGT
ACCAAAAGATGAAACTCACTTACTTCCAAAGATTGAGGGCCAGGTATGTC
ATCTTGAATATCTTATCATATCACGAGGCTGCCTCCATTTTGCAGGGTGT
CTGCTGGATCTCAATAAAAAAGCCTCAAATATTCCTTGATACTGATCCTG
ATACCCTTTTTTGTAGTATtcatgtttgttttgtttttctttggagCTTT
AGAAAGTGTTCTATCTATAAGTCTTGAAAACTTTGAATCTAGTGTAAAAA
CTTTCGTATGCGCCCTGTTTTAGTTTCTTATGCTTGTACTCTTTCTTAGG
TTTGGTTGACACTTTATCAATTGCTTTTACATCCAGAAGCACAAAGAAAA
TATGAATACAACTCTCATCGGAAAACACAACTATTAAAGGTAAGAAATTA
CAGTTCTACCGTTAATTTTCTAAAGTCATTAAAGCAGATtgtaattttta
ttgttttatatttGATAGCTTCGAAGGTACCTGCACGAACTATTATTGGA
TCAGTTGCCGTATCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCGG
TGATGGACCCACCTCCCTCTAAACAAGACCTCATCATTGAACAGGTTTTT
CCTTTTCCTCTCACATTATCTCACCTNGATTGAGGGCCAGGTATGTCATC
TTGAATATCTTATCATATCACGAGGCTGCCTccattttgcagggtatctg
cTGGATCTCAATAAAAAAGCCTCAAATATTCCTTGATACTGATCCTGATA
CCCTTTTTTGTAGTATtcatgtttgttttgtttttctttggagCTTTAGA
AAGTGTTCTATCTATAAGTCTTGAAAACTTTGAATCTAGTGTAAAAACTT
TCGTATGCGCCCTGTTTTAGTTTCTTATGCTTGTACTCTTTCTTAGGTTT
GGTTGACACTTTATCAATTGCTTTTACATCCAGAAGCACAAAGAAAATAT
GAATACAACCTTCATCGGAAAACACAACTATTAAAGGTAAGAAATTACAG
TTCTACCGTTAATTTTCTAAAGTCATTAAAGCAGATtgtaatttttattg
ttttatatttGATAGCTTCGAAGGTACCTGCACGAACTATTGTTGGATCA
GTTGCCGTATCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCGGTGA
TGGACCCACCTCCCTCTAAGCAAGACCTCATCATTGAACAGGTTTTTCCT
TTTCCTCTCACATTATCTCACCTTGCAAATACACCATTCTTAAGATGGAA
AATGCGATAGCGATAAGTGAGAGTCCAAAAAAATGGATTGTCATTTGAAA
TGATATTtgataatgggcttttccagaaaaaaaatttacccccactgttg
aggatattgatttttcgaagtattgaaccccctggatatcctactttatt
agtaaagacctcttggatatccactcttatgaagatgcttacccctggcc
ctggatatcgtattttttacttgaaaagacactttaccccctggatatcc
gctcccttatAGATATTTAACcacctggatatccacttttgaacaaaaat
cgttaaccccctggatatcccaTATCCTCAACAAGGGGGgaacggactat
ttctggaaaagcccaatatggTGGTAATACTCAAAATGTGAAGTTTCGTC
TGGTCATCCAAAAATACAAACTTGAACTAGAATCTCTCTGACTTCCTTGT
GACTTTCTTTTGTTCATTTCTCTGATAAGATTCCGGAAGTCCGTAACAAA
CTGGAGAGAATGTACGAAGGACGATGGAACAAGATTGCCAAAACACAACT
TCAACAAAATTTCACCATGAGCAGTAAAGATATGAAAGAGCATGCGCAAA
GGTTTGTTTTGGGAACTTTTTTATCCTGTATGAAACTAACTGCGTGCTCA
GCCTGTATCCACGCTACTTCATAAACTAGTAAAAAGATTATTTGGAAAAG
TaaaattctgatttttatgAATTGTCAGATTGGCTGCAACATATGATTTA
GACATTCTTGAGAGTCTGATTGATGAGGCGCCAACTTGTTCAAATTGTCA
AAACGAAGCAACAAAGAGGTGCTCAAGGTGTCAAAATGAGTGGTACTGCT
CACGGTAGGTAGAATCACGTTCTTTGACGTCAATCAGTGGAGCAGATTAG
ATGGTTTTGCACAATAGTGTGTTTTCCCCAGTTTTAACCTGTAGGACCCT
AAATAGCGAATAAGATGCGTCACTAcatctctattttgttttactCTTTC
AATGTTTCATTCAGACTGGCCCCTTTTCTTTTACAAGAATTCTACTTCGT
GGTAttctaaatttagaaaaagtagTTTGGTTTTCTTTTGGAAAGATGGT
TTCTTTTTTACATTGTCCTCGAACGCAATAAAAATCGGATTCTGAATAAA
TTGTTATTTTACGAAGAGTTTCTATTTCTTCTCCGTCATACTGTGAAAAT
GTCTCTTTGTGTTTTCACCAAATAAAAAGGAGCAAACACTCATCACTTTG
CTTTGATCAGGGATATTGGTAGCAAAATTACCAATCGGTACGGTGCACAA
TAAGAAACCCATTTCACTCCAAACGAATGTGTACGTGTGATTATTAAATT
GTTTCATTGGAAAACGAATCATTTGTAAACCGCTTTTGAAAGGGAATTTC
TCattgtgtttttattttctttagacCATGTCAAGTGAAACATTGGTCCA
AACATAAAGAACTGTGTAACATATTGTCAGCTAAATAATACAGGTAGGAT
TtagttgtttttcttcttcgacAAAATTTAAGCCAATTTGCCGCTCTATT
GATGTCTCCAACCCACGAAATCCATTTGTCGAAAATTCTGAAGATTCTCT
CCATCTCTTAATTGatgtagatttttcacttttcattttcttgttttctA
ATGATCTTTGAAACCACAGTAGGTCTTGTATTTTGGTGACTTTTCCGTGT
TTTCTCTTCTCTCCTCTCCTCTCCTTATGACTTTAATTCAAACAGTCTTC
CTATCAAAACTTCAATTCTTCGCTCCCATGATTTGCATAAAGATTTATTG
GTTTTAACTTTAAGACATGATTTTATCTCTATATGGTCGAGATTTTCTGG
TAGCTAATATCAATATTAAGGTTGGTTTTGCTTTTTTGTTTGTCGTGCTG
CAGCTCACTACAGTATTTGGTGAATCTGTCATTTTTACATTGTTATCAAa
ctaaatgttgaaaaaagcaatgCATCAAACTCTTGAACCATTACTATTTA
TATTTTAATAAGTCGTTTTCTACAAAACCTTTTTTGGAGCCGATATTTAG
TCTAAAATCAAAACCTTTGATACGAATTCGCAAgtttttccaataaaatt
tacTTGAGATAATTAATGAAATTTACCCATTTGAATTGATTTAAACCACT
AACGTTTTGCTATTATTTTTTATCAGTGATTCTTGGTTGAAAAAGGTGGG
CAAAGAGTCGTTCTAATGTGATTTGATAAGTTATCTTCTAGAGCTGTCTA
TCTTCATTCGCCGATGcggttttaattttcttaaatgacgttttacattt
taaaatcaCATTTATCTTAATTCAGCTCTTAATTCATAGCTTTTATTATT
TATCGTGAGGATTATCTAAATTGTCACATCTTTATATGAACCTCGCTGGG
CTTTTTCTCGACACAAAATCTTCAGAAATTTTCGTGGatgtttttggaaa
ttttttaaatgcacttcaattcatcatggatattcttaactttttggaga
aatcgtcctaaaatatttattctgcattcttaggttatagtctaaattca
aactagatttaaTATGTAATACATACGTCTAAACCATAAAATAACATTTT
GGTGAAAGTGTTgagataattggcaatttacagttaaaaatgctctgaaa
tggcatttttagggtttatttactaaattccatgatggcgatattcttag
catattcttaagtttttggccaattttatcaagaatattcttataaaaga
aaagcgTGTATACTGTTcgacgaagaaaaaatattaccTAGCGTGAAGGG
AAATGGAATATTATAATATGGGAATGCGTGAAAAGGGGGTTGACGAGAAT
TCTTTGCTTTACTCAGGAGAGAAGGTTTTATCTCTTTGttatgaagcaaa
ataattCAGCGGGCAGAATTGAAAAAGGAGATCCTAATTATCTGAATTAT
TTCGCCGCCTGTTTACTTTATATGAATCACCATGGTAACACGAGAGAGAA
AATCTTCTACTCCATTTTCTGTTGACTCTTCATGttaacatttcaaattt
tccagtcaaaaaCAAAGTTGCCATNTTATCAGATAAAATGAATTAGCCTC
GGCAAAATCTTTATAATTTTAAAGTTCTTTCTATCAAATAAAATCATTAA
GCCGAGCCATTGGGCTATTGTTATTGTAAAATGTCTTATTAGAATTTTAC
CAAACGATCATTGCTTCAGTAGTTATTCCCCTCTCTGTACATGTAGGTAA
AAAGTTGATTGTTTGGTCATTCTCTGAAACCATCTGAAAGAAGTGGCAAG
CAAAGTACTTTCTTAATCATCCAATAATTGTTTCATTTCCATTTTGGTTG
AAGTGTTTTTTCAAGTGCGTCATCTGTTCTGTGAATGGGATTATTTAATT
GATTAGAAACtgtattttcatattttctgcAGTTGGGGGTGTCAAAGGAA
GTGTTTCTGTATGATTCTGCAATTTCCAGTACTGGCTCCTAAACAATTCG
AATAGCTGCGAATAGTGAAATTGTTTGATACTTTTCATCTTTACCTTTGA
GAGATAATAGAAGCATGTTCTTTCGATTCGCAGATATTCGGGTTGGCTTT
TGGTTTGGTTATCTATTTTTATTATCAAAGGGCGAAAGGAAATCATAGTA
TATCTGCTTTCCTGAATCCTTTTCACTTTGAACTCGCTGATAAACGGAGA
TTTTTATGATCTCTTTAAAAAAGACCAAGTTAAACGAATCGACTGGTTAG
CTCTTTGCTTTGATGAAATCCTCATACGAAATTGTTTCATCTTTCGAATT
TTCGTAAGGCGGAATTGTTTGGATATTGCTGGTTGTTGTTACAATTCATA
TTTAAGGTGTCATGCAGCTTTCATCCATCATCCACACTTTCCCTTTATTN
tatttctttttcttttcatcatgTACCATATTTGGGAGGTATTAAATTGC
TCTTTCCCACGTCAAAGATATTTTAGTCCTTTGTTGGAATTACACGCATT
tgagtaatttttgaaaatacgaAACGAAAACTATCTTGCGTAATTNATTT
TTTCTTCaaaccaaaaagtaaaaatgttcGCTTTTGGGACTTACATCAGG
CTTCCTCGGTTTCTTTTTTTTACGTTTACTCGCTAACTTGGTTATGCATA
TCACACAGATGGCTTAAGTATGTACACCAAGTAGGCTTTTGAATTGTGGT
TTCATTCTTTGATATCGCTGACCGATAATCCAATATCCATTGATGTCGAA
TGAAGATAAGTAGGAGAAACTTCCATCCAAATTCATCAtttttgattact
tttatttgtGGAAGGGGGTGCACAAAATTGCTAATGAATTGTCTAATGAC
AgtgtattttgagaaaaaggAACTACTTTTTTCGATCAATTGTTTGTTCC
attaaaatttccaacctttataaagattttttatttggaCAACTGTAATC
TataatttattttcctttttttacagCAAATTGAAAGAAAGAATGCATAA
CTCTGGATGCTGACCAGCCTACAACATCGACTGCCAAGAAGAGAAGGATG
TCTTCAACAGCTTCCGCTTTAACAATCACACTTTTCGTTTTACACAGTAT
TGCTATTACGCTTCATTGTCTTGGANgttttcttcattttgttgcaagaa
cttttgaagaatattttggtTTTGGCAAGTTCGTTGCAGCCTTCCATTTT
GTAACATTTTATGTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000584XLOC_000584Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001011-exon-sc0000007-1491911889:663051..663242TCONS_00001011-exon-sc0000007-1491911889:663051..663242Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:663051..663242TCONS_00001011-exon-sc0000007-1510915933:663051..663242Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:663051..663242TCONS_00001011-exon-sc0000007-1575043694:663051..663242Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:669838..669880TCONS_00001011-exon-sc0000007-1491911889:669838..669880Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:669838..669880TCONS_00001011-exon-sc0000007-1510915933:669838..669880Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:669838..669880TCONS_00001011-exon-sc0000007-1575043694:669838..669880Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:670217..670279TCONS_00001011-exon-sc0000007-1491911889:670217..670279Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:670217..670279TCONS_00001011-exon-sc0000007-1510915933:670217..670279Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:670217..670279TCONS_00001011-exon-sc0000007-1575043694:670217..670279Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:670521..670637TCONS_00001011-exon-sc0000007-1491911889:670521..670637Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:670521..670637TCONS_00001011-exon-sc0000007-1510915933:670521..670637Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:670521..670637TCONS_00001011-exon-sc0000007-1575043694:670521..670637Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:670782..670835TCONS_00001011-exon-sc0000007-1491911889:670782..670835Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:670782..670835TCONS_00001011-exon-sc0000007-1510915933:670782..670835Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:670782..670835TCONS_00001011-exon-sc0000007-1575043694:670782..670835Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:670945..671024TCONS_00001011-exon-sc0000007-1491911889:670945..671024Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:670945..671024TCONS_00001011-exon-sc0000007-1510915933:670945..671024Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:670945..671024TCONS_00001011-exon-sc0000007-1575043694:670945..671024Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:671122..671161TCONS_00001011-exon-sc0000007-1491911889:671122..671161Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:671122..671161TCONS_00001011-exon-sc0000007-1510915933:671122..671161Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:671122..671161TCONS_00001011-exon-sc0000007-1575043694:671122..671161Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:671250..671338TCONS_00001011-exon-sc0000007-1491911889:671250..671338Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:671250..671338TCONS_00001011-exon-sc0000007-1510915933:671250..671338Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:671250..671338TCONS_00001011-exon-sc0000007-1575043694:671250..671338Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:671451..671491TCONS_00001011-exon-sc0000007-1491911889:671451..671491Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:671451..671491TCONS_00001011-exon-sc0000007-1510915933:671451..671491Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:671451..671491TCONS_00001011-exon-sc0000007-1575043694:671451..671491Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:671612..671674TCONS_00001011-exon-sc0000007-1491911889:671612..671674Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:671612..671674TCONS_00001011-exon-sc0000007-1510915933:671612..671674Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:671612..671674TCONS_00001011-exon-sc0000007-1575043694:671612..671674Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:671961..672043TCONS_00001011-exon-sc0000007-1491911889:671961..672043Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:671961..672043TCONS_00001011-exon-sc0000007-1510915933:671961..672043Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:671961..672043TCONS_00001011-exon-sc0000007-1575043694:671961..672043Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:672897..672986TCONS_00001011-exon-sc0000007-1491911889:672897..672986Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:672897..672986TCONS_00001011-exon-sc0000007-1510915933:672897..672986Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:672897..672986TCONS_00001011-exon-sc0000007-1575043694:672897..672986Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:673066..673191TCONS_00001011-exon-sc0000007-1491911889:673066..673191Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:673066..673191TCONS_00001011-exon-sc0000007-1510915933:673066..673191Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:673066..673191TCONS_00001011-exon-sc0000007-1575043694:673066..673191Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:673730..673851TCONS_00001011-exon-sc0000007-1491911889:673730..673851Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:673730..673851TCONS_00001011-exon-sc0000007-1510915933:673730..673851Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:673730..673851TCONS_00001011-exon-sc0000007-1575043694:673730..673851Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:673979..674104TCONS_00001011-exon-sc0000007-1491911889:673979..674104Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:673979..674104TCONS_00001011-exon-sc0000007-1510915933:673979..674104Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:673979..674104TCONS_00001011-exon-sc0000007-1575043694:673979..674104Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:674675..674743TCONS_00001011-exon-sc0000007-1491911889:674675..674743Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:674675..674743TCONS_00001011-exon-sc0000007-1510915933:674675..674743Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:674675..674743TCONS_00001011-exon-sc0000007-1575043694:674675..674743Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1491911889:677727..677968TCONS_00001011-exon-sc0000007-1491911889:677727..677968Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1510915933:677727..677968TCONS_00001011-exon-sc0000007-1510915933:677727..677968Clytia hemisphaericaexon
TCONS_00001011-exon-sc0000007-1575043694:677727..677968TCONS_00001011-exon-sc0000007-1575043694:677727..677968Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:663051..677968 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.6293	2.4415	4.19774	3.23484	10.722	9.1002	6.4404	6.97236	4.43534	3.26998	2.55385	2.64645	0.475644	1.66458	0.61536	1.38969	1.1148	0.334449	0	1.31978	0.837351	2.58458	2.25929	3.41875	3.6154	3.50819	2.29158	2.10767	1.08333	0.00840669
Blast
[Close]
BLAST of TCONS_00001011 vs. Swiss-Prot (Human)
Match: ZMY10 (Zinc finger MYND domain-containing protein 10 OS=Homo sapiens GN=ZMYND10 PE=1 SV=2)

HSP 1 Score: 364.385 bits (934), Expect = 8.102e-120
Identity = 194/432 (44.91%), Postives = 291/432 (67.36%), Query Frame = 2 
Query:  116 VLLSTEAELLVKALDVSSLEKVGDKRWWNRHDMLEKLNIQSIMNIP-SNSCFITENLLTHGKISLVINELITSEIWSERIFPILYHEMSQKDQSTLPVYMTLFHEATVAGLVESVFYYKEVSEEAGDFLLDLIDYAYRKLTKLISKQHCESITQ------KDPKNDLLKQNEDIQFTIAMKCISIIKYICDAMDSITLSAITRILNTHDFPYLLSQLIDLAPWKKRKENGEVEIFTDNKWVIVPKDETHLLPKIEGQVWLTLYQLLLHPEAQRKYEYNLHRKTQXXXXXXXXXXXXXXXXPYLSEVQRFLENLSVMDPPPSKQDLIIEQIPEVRNKLERMYEGRWNKIAKTQLQQNFTMSSKDMKEHAQRLAATYDLDILESLIDEAPTCSNCQNEATKRCSRCQNEWYCSRPCQVKHWSKHKELCNILSAK 1390
            +LL  EAE+LV+ L    L ++G + W  +H+ LEKLN+Q+I++   S    I E L+THGK+  ++ ELI  E+W +++FP+       K Q+T P+YM + HEA++  L+E+VF++KEV E A D +LDL+DY +RKLT L+++  C    +       +P  +L KQ E ++F IA+K +S+++YI D +DS++LS ++R+L+TH+ P LL +L++ +PW +R E G+++ F  ++W  V   E   L K++GQVW+ LY LLL PEAQ +Y      K +LLKLR +L + LLDQLP L+ +Q FL +L++ +  P K+DL++EQIPE+  +LER   G+W  IAK QLQ  F+ S +D++  A+R A TY LD+LE++  E P C+ C  EA+KRCSRCQNEWYC R CQVKHW KH + C +L+A+
Sbjct:    6 LLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQELLVTHGKVPTLVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETVFFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELMEFEIALKALSVLRYITDCVDSLSLSTLSRMLSTHNLPCLLVELLEHSPWSRR-EGGKLQQFEGSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFAKGRLLKLRAFLTDTLLDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHVFSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC-VLAAQ 435
The following BLAST results are available for this feature:
BLAST of TCONS_00001011 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZMY108.102e-12044.91Zinc finger MYND domain-containing protein 10 OS=H... [more]
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