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TCONS_00001009 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001009
Unique NameTCONS_00001009
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1691

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001009 ID=TCONS_00001009|Name=TCONS_00001009|organism=Clytia hemisphaerica|type=transcript|length=1691bp
CGTCGCTTCTTTTTTaggctccctgcggtggcaaaaatTTCTTTAGAAGC
CAAAAATATTGTACCGGTAATTTACCGGATCATTTTCCGATTAGAATAGC
GGATATAAGCCGGAGCTGCATTCACGAGCAACCATTCCATAAACAAATAT
GGCGGCCGTGCAACATGTTCTTTTATCCACCGAAGCTGAACTTCTGGTCA
AAGCTCTCGACGTCAGTTCTCTGGAAAAGGTTGGAGATAAAAGatGGTGG
AATAGACATGACATGTTAGAGAAGTTGAATATTCAATCAATAATGAACAT
TCCATCGAATTCTTGCTTCATAACTGAAAACCTGCTGACTCATGGGAAGA
TTTCATTGGTTATCAACGAGTTGATCACTTCAGAGATTTGGTCGGAAAGG
ATATTTCCTATTTTATACCATGAAATGTCACAGAAAGACCAATCCACACT
TCCTGTCTATATGACTCTTTTCCATGAAGCAACTGTTGCGGGATTGGTTG
AATCAGTATTCTACTACAAGGAAGTGAGTGAAGAAGCAGGAGACTTTCTG
TTGGATCTTATCGATTATGCGTACCGAAAACTAACCAAACTCATTTCAAA
gcAACACTGTGAAAGTATAACTCAAAAGGACCCCAAAAACgacTTACTGA
AACAGAATGAGGATATCCAATTTACGATTGCCATGAAATGCATCTCCATA
ATCAAATATATATGTGATGCTATGGATAGtataACATTGAGTGCAATCAC
AAGAATTTTGAATACACATGACTTTCCGTACCTGCTGAGTCAATTGATTG
ATCTTGCTCCttggaaaaagagaaaagaaaacgGAGAAGTGGAAATATTC
ACGGATAACAAATGGGTCATAGTACCAAAAGATGAAACTCACTTACTTCC
AAAGATTGAGGGCCAGGTTTGGTTGACACTTTATCAATTGCTTTTACATC
CAGAAGCACAAAGAAAATATGAATACAACTCTCATCGGAAAACACAACTA
TTAAAGCTTCGAAGGTACCTGCACGAACTATTGTTGGATCAGTTGCCGTA
TCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCGGTGATGGACCCAC
CTCCCTCTAAGCAAGACCTCATCATTGAACAGATTCCGGAAGTCCGTAAC
AAACTGGAGAGAATGTACGAAGGACGATGGAACAAGATTGCCAAAACACA
ACTTCAACAAAATTTCACCATGAGCAGTAAAGATATGAAAGAGCATGCGC
AAAGATTGGCTGCAACATATGATTTAGACATTCTTGAGAGTCTGATTGAT
GAGGCGCCAACTTGTTCAAATTGTCAAAACGAAGCAACAAAGAGGTGCTC
AAGGTGTCAAAATGAGTGGTACTGCTCACGacCATGTCAAGTGAAACATT
GGTCCAAACATAAAGAACTGTGTAACATATTGTCAGCTAAATAATACAGC
AAATTGAAAGAAAGAATGCATAACTCTGGATGCTGACCAGCCTACAACAT
CGACTGCCAAGAAGAGAAGGATGTCTTCAACAGCTTCCGCTTTAACAATC
ACACTTTTCGTTTTACACAGTATTGCTATTACGCTTCATTGTCTTGGANg
ttttcttcattttgttgcaagaacttttgaagaatattttggtTTTGGCA
AGTTCGTTGCAGCCTTCCATTTTGTAACATTTTATGTTAAT
Run BLAST on NCBI

transcript from alignment at sc0000007:663000..677968+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001009 ID=TCONS_00001009|Name=TCONS_00001009|organism=Clytia hemisphaerica|type=transcript|length=14969bp|location=Sequence derived from alignment at sc0000007:663000..677968+ (Clytia hemisphaerica)
CGTCGCTTCTTTTTTaggctccctgcggtggcaaaaatTTCTTTAGAAGC CAAAAATATTGTACCGGTAATTTACCGGATCATTTTCCGATTAGAATAGC GGATATAAGCCGGAGCTGCATTCACGAGCAACCATTCCATAAACAAATAT GGCGGCCGTGCAACATGTTCTTTTATCCACCGAAGCTGAACTTCTGGTCA AAGCTCTCGACGTCAGTTCTCTGGAAAAGGTTGGAGATAAAAGGTATACT TAGAAATTCAATGACTATCAAAAGGATAACTTTTTCCCTTGGATTTATAT TTCCCCTTGTCAGAGATCTTCTACTTCTGCGCCAGCACACGACGGGCTTT CCAGTACACAGGTTAGCGTTTTCCTNGCGCCAGCACGGTGGGCTTTCCAG TACACAGCACAGGTTTTCCTGGGCTGGGGGTTCCCTTTATCTCCCCATGG ATTTATTATGTTTCCCTTGTCAGAGATCTCCTGCTTTCTAGGAGCTTTCC AGGTTTACCGGCAGGTTTCCTTGATCCCCCTTGGCTGGGTTTCTATTTTC TGGTATATATAGAGGTTTCTTGCATGCCACAAGCCttttagcaactccag aagatttttcaaatttcaattttttttaaaacctatcctatcttgtagag ctttgaaaaagaaagaaaatgaggggtcataggccttcagaggataagtg gttgtaaagatattcaaattttagtgtcaaaaatttgactaaaaatgtca aaaaaaggttagaaaaatagcttggaaaaattcgaaaaatgtgtcaaaaa agaaaaaaaagaaattttccccAGTCATGCctcttcaattttgcatatct ctttttctagtgtagctagaaaCCTGAAATTTGAAGGGAAAATTCTTTGA TTGCGTTAGAATAttaatatataaaaatatttgtaaaatatttagtatca aaataacgaaagatatatttttttggaaaaaagaagacattgcattgttt tattttagtttttgaagaaaagtagcttgggaaaagttgaaatgagtcaa aaaaggtggtaggacccattttcaaggtgcctctggaaatggaggaacaa aaacttatgagtaaagcaagaataagtttttctgaaaggagaaaccccaa atgaaaagaaaatccatttcggcagaaataaaaacttttttttcggacat tcccatgcaaaagaagcaaaaaagtgataaaaactacatgaaaatgaaag aactaaaaaattagcaaatgtgatttttgaattcctcaccctttttctga taaacatacaaagtttcagccttcaaatacattttcctccgtttccagac acatttgttcatTGATAGTTGCAATTTTTTTTtctcccgtcggcaaacaa ttttcaaaatgttgcaaaacattctgcattttaccaatttgccgtctagc acgtgtccacagtgttatataccgctggaaagctaagatcacgggctttc atttagtaaaaaaacGGAatgctttagcatacatagaaaaaagttccaag ggttcaaattttacagaaaaatgaaacatttggtttgacgtcaacgtgTA ACACTTGTGGCGACAAAAACGCGTATAAAACGCGAGTGTATTGCCCTATC TACACCGTAGCAGATAAACATTTATAATGTAGCACGGGCTTTAATATTCC TAATTAGAACTAACGTGCCTAATTAGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTTACTTATGGCGTC ATTTTGAAGCCCTCCgcccaaattttgttttgatttttggctcaATATAT CATCTTTGACCTGCTCTATCTATTGCTCATAGTTAGAATTTGCGGATTTT GTTTGTTGGTGAAGAAtctgaatttttaaaaaatcatattcttaattagg attgaaaaacaaagggataatcctaattaagaaagtccgtgcgatcaaaa aaaaatttgcttaatTAGAATAGAACTCCTGACTGACAAGGCACAGCCGG TTTATAGGTTTTTTCCTCTGTGGTTAGTTTCTATAGATTCATCCTCTCTA GTCGCAACAACATGTCTTTCATAGAAGAACAGTAAAGTCTCTAGTGGGAT TTCTGAATAGACTTTACACGCTGTCTCTGTCTCggtaggcctccagagga taggTACGCTaagtagcgactccagaagtcatgcaacttttgttgacatc aaaccaaatgtttcatttttccgtgaactttgaacccttcgaactttttt ctatgtatgctaaagcgttcttgtttttaccaaaagaaagcccgtgatct CCGCTTTCCAGCTGtaatataacactgtggacacgggttagacggcaaat tggtaaaatgccgaacgttttgcaacattttttaaattgttttccGACGG GAGATAAAAAAATTGCAACTAGCAatgaacaaatgtttctggaaatggag gaaaatgtatttgaaggctgaaactttgtatgtttatcagaaaaagggtg aggaatttaAAAATCACATTTgctaattttagttctttcatttgcatgta gtttttttttacttttttgcttcttttgcatgggaatgtcccaaaaaaaa aattgatttcttccgaaatggattttcttttcatttggggtttctcctta aagaaaaacttattctttacttataactttttgttcctccattttcagag gccccttgaaaatgggtcctaccaccttttttaactcatttcaacctttt ccaagctacttttcttcaaagacaaaaataaaacattgcaatgtgttcta ttttcaaaaaaagatatatcttttgttattttgataaatatactaaatat tttacaaatatttttatataaataatAGTATtgtaacaccatcaaagaat tctccctccaaatttcaggtctctagctacactagaaaaagagatatgca aaattgaagaagcatgactagaaaatttcttttttttcttttttgacaca tttttcgaatttttccaagctattttcctaacctttttttttacattttt agtcaaatTCTTTACactaaaatttgaatatcttcacaaccacttatcct ctggaggcctttgacccctcattttctttctttttcaaagctctacaaga taggataggtttttaaaaaaattgaaatttgaaaaatcttctggagttgc tacgcTAGGCGAAGGGAAGTTAGGTATTAGTTTACCGTTACAATGAATTC AAAATTCGAtgcggcaaaatttcattattcattattcattattttactAA CTCTCCCACGCGCTGCAAGTGTACCTGTACTATTAAGTTATACCCCTTCG ATATATATTACCCGAGGATAAAAATGCTTCTTTTCGAGGCGTGTGCCCTC ATATCCTTTGTTTCACATTGGGCGCGCTGGTCCTAGGTCACTTGTTTGAC AGTACACTTGTGCGGCAGCTCAGTTGTTCAACATTTTAGCaaaattgtcg aacaactgTATTGTCAACTAACTGGGAAGATCTGTTGTTAGACTTACCAG TCGGTTGGTTTGAAACGCAGGACGCAGGACAGGGTGTGTACATCAGTTTT aacaaaatgcttttttcatgATCAATATGATGCTAACGgtgcaagtggat atagattgatatattttgaaaacattaaatgctccaaaagggctgtttta gagatatgaagaaagtgacgtcattttcatcaaaaatacgaggcagggga taaaaatattgatatagtTATGAAATATGTACTTTTGACTGCCTTTAACG ccattttaatcaatttttgttatcatacccaaggtgatgcaggagatata atgagatatgatatagcgattgtgaaatagctatttccCTGCCAGGAGGC TGTTTAAAGATGAcataaatatatatatatataacacGTGTACTTTGGAT ATAACATATGTAACATACCAatgacattgaaaagataacttcTATTATAC ATGCGTGATTTGtgtgtaatatataataaaacacgTGGTAGGCACGTGGA TagattttgacctttaaaaaggTTCCAGATCAACCTTCAGAATGATATTT CTAACAATTACAATTGTTTTTAAacattctcttctttttttacaTAAATT AAAACTGACCTGTCAGCAttgacctgcgtcctgtgtcctgtgtCTTGTGT TTCGAACCAACCGCTTCCCAGTTGGTTGACGCttacttgttcgacaatat atCGATATAAAAGTCAAACAACTGGGATGTCTAACAAGTAAGCGTCAAGT TGTTCAACATGTAAGTTGTTCGACAATACAGTTGTTAGACAATTATTTGT TTCCGCTCATTTTCTTCTCAAAGCTTAGATGGTAGGTACTAATCGGATTA ATCTTCGCCTTCTTCGCCAAATGTATCCACGCGGAATTTTCGAGATCAGA CTTTTGGGTAAACCGGGCTTGTAAATATGGTGTTTATGTGACGAAAATTG CTTTTAAATTCTactcatgtaaatgggtcagtgtttgaagTCCGGCAAGA TTTCCGGGGAAAAAGCCTATCCTGCGGtgtgcggatctaggtgggtttgG TCTctcccgtagatctttttcttgggaagttgatcttcaaattagttttc aacgTTGGCTTGGCtccaattttttcatttatggctcaaattttaggtaa tttctcatagtttttgaaaatattaatttctataaaaagtgccgggttat ttttttgtgattccctttagaagttttgcagcACATTTATTTGCctgcga gtcaagtaaacgcTATAGCGCTTTTGCAGTATTAATCTTTGATGCGCATT TCGGTGGGACGCTAATATGACTAACTGTCAAGTATGAATAACTGTTAATg ggaatcaaaattataaagtgcacttacaaacatcaatatatcagatttaa caaaattaataacgacactgtcatcattgacaataaagcaaaagattttc tgtcaagagccttgtaaacattgcAACAAcctccatcgaaatgatctgcc gcagctaagtctaccattttagcgcggtccaAGGATTGAGCAGAGAACAC TCACAGAACACCCGCAAGCTCCCgtgcgggtgaaaaactttaatctgtca gTCATTTTCTCAATTGAAGAGTACgagaagcgattctagctttacaatag tgccgcggatcattagtggatagtattcaattatcattatccctttattt tcattcctagaacttttgcaaaaaaaaaaggatcttttactgctctattc acatactgaatttgaaagatcttctatgtggcgttttttttgcaaatttc aaaaaactgatttttgtcctgcttttgcgggactttagcttaagtgcttg catGCAGCATCTAGGCTCCAAATATACGTGTTTCCCGTAATtcttgtatg aagagttaggtctatactgccatagatgaaaaaatttgagccaagccaac cttgaaaactaatttgaaaatcaacttcccaagaaaaagatctacagggg agacggaacccacctagatccgcgcaccaccggataggctatttcctgga aattttcccggacctcaaacactgaccaatttacatgtgcggaattattt tttctttagcatataaacaaggccttaaattaaaaattgaagcaatgtca gggaattgaatgacaaagttTGGTTGGTTAATATTCTGGATGCTGCACAT TTGCAATaggtcattttgtctcattttaagttttcaagttttaattaatt gttttgGGAActaacttgaacttgattcaggtaactctcatccttgttgt ggcAAATActtcctgtagatgactgatgttgttttttctgaaagcttgat ttcctagtgtgactaactgacagtCCGACCaactgataatttttttaact tttccaaatcttttgagTCAGAGAGACGcaaaattgttgaaattttaTCC AATTCCATAATATCCAACCCAAAACAAATATTAAGCACCTAAATAGCAGA GTCATGGCTGtattccttttttataagaacaccttAACCTGCAATTGTAG AAGTGATCTTGCAATTGAGGTGTGTGCCTTTGTGGATCCAAACTTAGGTA TTTCTTTATGTTTGCGGTTTGGATTCTAGGATTGTGCGATTGCTtgaaaa attgaggtttttggtgggaaaattAAACAAAGGTTCAAATTTCAGCTACC AACCGTCCGACCcattttttaagcatttaggacacgaaccaaacattcaa ttgggcctggcccaAAACAGAGATACcccatttgaaaaaaagaaggaaGC ATGGTAGCCCATACACAAAAGGGTCACGAAAAATCAAGAAACATAAATTA TTTCCATGCGAAAGtgggttttaaatttttttaaagattgacaCTGTCAT GATTTCCTCTCCAATATGCTAATTCCTACATTTCCCCCCTGAACATTCAC TTTGGTTGTTCTTATTGAACTTCAAATAGAAATATCTTCTCAATTAAACC TAATTATGTGTATCATTCCCTAAGGGAAGGGGcattttaaagaaggaaaa gtgTTATTTATTTTAAGTAATATGGTAAGGAAGTTTCAACTGAAGCTTGT TGGTCGCAATCCTTTTAAAGCTTGGGTGTCGGTGGGGGCTTTTGAGATTT TCAGAATGTAGAAAACTAAATTCAATTGAATTACTTGGATGGTTGGTACA AAATTTATCTTCATTCTGTtataatgtttttctttcagatGGTGGAATAG ACATGACATGTTAGAGAAGTTGAATATTCAAGTATGTTTAAAGTTTCCAA ATTTAGAATCATTTTGGTTTATCCttctaactttttattttgttagtTAT AGTAAAATTTGAATGAATACACTGGAATACCCCGCTGAACCCTGGGGTTG GGTTAATGCCAAAGCATACAAGAGggtacaagggggaggggtgGTCAATC TTCATCGATTCTGAGCatacatactttttgaatggtcccaaagaaaattt ttaagaatttatgaACAAAATCCTATAAATGGGTGTATAATTCAAGAAAT GCACTAAGATGAACTCTGGTTTCTATTTGAATTCTCAACATCATCTCAAT TATATATCTCTTTTTAGTCAATAATGAACATTCCATCGAATTCTTGCTTC ATAACTGAAAACCTGCTGACTCATGGGAAGGTAAATgtttatttgtaaaa attaaTTAACCACTTACTGACACTATCATCTTATGTGAaggattttctta aaatttgaatCCATTTAAACGTTCtagaaaatcttcaaagatcttttttt tctctccAGGTTTCTCTAATTCTTAGTTAGCTATTATCAAGCTGTTATCT TTATCAAATTATTAAGAAATTTTCTTGCCTTCGTGGGATTTATCAATGTT TATTTCATGGGATCATTTTAGATTTCATTGGTTATCAACGAGTTGATCAC TTCAGAGATTTGGTCGGAAAGGATATTTCCTATTTTATACCATGAAATGT CACAGAAAGACCAATCCACACTTCCTGTCTATATGACTGTATGTTTTTTT GATATCATTCTTGAATACAGCAATTTACAGCTATTCTTTTGCTTTCACAA TACTTTTCACTATTTTCAGCATTAGATTGAAAGTGTGATAGCTATGGTTT TCATAAAATGTTATGGTATGTTATTATTTTAGCTTTTCCATGAAGCAACT GTTGCGGGATTGGTTGAATCAGTATTCTACTACAAGGTATTTAGACTTCt tcctgaattttcaaaatatacttCTTTGTCTCATTGACACTACTATGACA TTGCATAGTTTTTTTGCACATTTACACCGACATATGTTTTTTTAGGAAGT GAGTGAAGAAGCAGGAGACTTTCTGTTGGATCTTATCGATTATGCGTACC GAAAACTAACCAAACTCATTTCAAAGTACGTATCATTTCTGTATATATAT GTGACTTTTTGGAACAAGCAAGTTAATTGATCAATAATGATCTGATAAGG TctcttgtttttaacattttaggcAACACTGTGAAAGTATAACTCAAAAG GACCCCAAAAACGTAAgataattgattttctttaagaTATCTTGAATGAT TACAAGAAGTAAAAATCGATGACAAGTTAAccaaaatttgtatttttcag gacTTACTGAAACAGAATGAGGATATCCAATTTACGATTGCCATGAAATG CATCTCCATAATCAAATATATATGTGATGCTATGGATAGGTAAGtgtctt gtttttcttttacttttaaaactTCTAATACAGGAGAATGGTAATCGGTA TAATATCGGTAAAATATTAATTTGTTCACTCGAcctctatttttttttca gtataACATTGAGTGCAATCACAAGAATTTTGAATACACATGGTATGTTA GCAATTATGAAAACATTTGATTACAGTGGCTGTATCTACTTTTGTTTTTA TGAATCAGTTTTTTTCTTGATTAGGCATCATATTATTTATTGAACATAAA CTTCTGTTGTAGACTTTCCGTACCTGCTGAGTCAATTGATTGATCTTGCT CCttggaaaaagagaaaagaaaacggtgagtttacaaaataatttttcat tcgtTAAGGGCGTCATTTAAAGTATCTGCTACAATTTGCTTACAcaacat ttttaaacaaaaaaaaacgactTTTTCTCCTTTCGGCGCCCTGCgtgaat aaatttgaaaaattcttttgtttattctataatgtcagcatagaggcgcg ccttctttcaatttcataaaagtaTCTTCAATCGGTTCGCAATCATAGTG TTTGTGTTTTGCTTTTATTAAGTTACACAACATATCACTCTATTTTTCTT ACATACCGTAGGAGAAGTGGAAATATTCACGGATAACAAATGGGTCATAG TACCAAAAGATGAAACTCACTTACTTCCAAAGATTGAGGGCCAGGTATGT CATCTTGAATATCTTATCATATCACGAGGCTGCCTCCATTTTGCAGGGTG TCTGCTGGATCTCAATAAAAAAGCCTCAAATATTCCTTGATACTGATCCT GATACCCTTTTTTGTAGTATtcatgtttgttttgtttttctttggagCTT TAGAAAGTGTTCTATCTATAAGTCTTGAAAACTTTGAATCTAGTGTAAAA ACTTTCGTATGCGCCCTGTTTTAGTTTCTTATGCTTGTACTCTTTCTTAG GTTTGGTTGACACTTTATCAATTGCTTTTACATCCAGAAGCACAAAGAAA ATATGAATACAACTCTCATCGGAAAACACAACTATTAAAGGTAAGAAATT ACAGTTCTACCGTTAATTTTCTAAAGTCATTAAAGCAGATtgtaattttt attgttttatatttGATAGCTTCGAAGGTACCTGCACGAACTATTATTGG ATCAGTTGCCGTATCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCG GTGATGGACCCACCTCCCTCTAAACAAGACCTCATCATTGAACAGGTTTT TCCTTTTCCTCTCACATTATCTCACCTNGATTGAGGGCCAGGTATGTCAT CTTGAATATCTTATCATATCACGAGGCTGCCTccattttgcagggtatct gcTGGATCTCAATAAAAAAGCCTCAAATATTCCTTGATACTGATCCTGAT ACCCTTTTTTGTAGTATtcatgtttgttttgtttttctttggagCTTTAG AAAGTGTTCTATCTATAAGTCTTGAAAACTTTGAATCTAGTGTAAAAACT TTCGTATGCGCCCTGTTTTAGTTTCTTATGCTTGTACTCTTTCTTAGGTT TGGTTGACACTTTATCAATTGCTTTTACATCCAGAAGCACAAAGAAAATA TGAATACAACCTTCATCGGAAAACACAACTATTAAAGGTAAGAAATTACA GTTCTACCGTTAATTTTCTAAAGTCATTAAAGCAGATtgtaatttttatt gttttatatttGATAGCTTCGAAGGTACCTGCACGAACTATTGTTGGATC AGTTGCCGTATCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCGGTG ATGGACCCACCTCCCTCTAAGCAAGACCTCATCATTGAACAGGTTTTTCC TTTTCCTCTCACATTATCTCACCTTGCAAATACACCATTCTTAAGATGGA AAATGCGATAGCGATAAGTGAGAGTCCAAAAAAATGGATTGTCATTTGAA ATGATATTtgataatgggcttttccagaaaaaaaatttacccccactgtt gaggatattgatttttcgaagtattgaaccccctggatatcctactttat tagtaaagacctcttggatatccactcttatgaagatgcttacccctggc cctggatatcgtattttttacttgaaaagacactttaccccctggatatc cgctcccttatAGATATTTAACcacctggatatccacttttgaacaaaaa tcgttaaccccctggatatcccaTATCCTCAACAAGGGGGgaacggacta tttctggaaaagcccaatatggTGGTAATACTCAAAATGTGAAGTTTCGT CTGGTCATCCAAAAATACAAACTTGAACTAGAATCTCTCTGACTTCCTTG TGACTTTCTTTTGTTCATTTCTCTGATAAGATTCCGGAAGTCCGTAACAA ACTGGAGAGAATGTACGAAGGACGATGGAACAAGATTGCCAAAACACAAC TTCAACAAAATTTCACCATGAGCAGTAAAGATATGAAAGAGCATGCGCAA AGGTTTGTTTTGGGAACTTTTTTATCCTGTATGAAACTAACTGCGTGCTC AGCCTGTATCCACGCTACTTCATAAACTAGTAAAAAGATTATTTGGAAAA GTaaaattctgatttttatgAATTGTCAGATTGGCTGCAACATATGATTT AGACATTCTTGAGAGTCTGATTGATGAGGCGCCAACTTGTTCAAATTGTC AAAACGAAGCAACAAAGAGGTGCTCAAGGTGTCAAAATGAGTGGTACTGC TCACGGTAGGTAGAATCACGTTCTTTGACGTCAATCAGTGGAGCAGATTA GATGGTTTTGCACAATAGTGTGTTTTCCCCAGTTTTAACCTGTAGGACCC TAAATAGCGAATAAGATGCGTCACTAcatctctattttgttttactCTTT CAATGTTTCATTCAGACTGGCCCCTTTTCTTTTACAAGAATTCTACTTCG TGGTAttctaaatttagaaaaagtagTTTGGTTTTCTTTTGGAAAGATGG TTTCTTTTTTACATTGTCCTCGAACGCAATAAAAATCGGATTCTGAATAA ATTGTTATTTTACGAAGAGTTTCTATTTCTTCTCCGTCATACTGTGAAAA TGTCTCTTTGTGTTTTCACCAAATAAAAAGGAGCAAACACTCATCACTTT GCTTTGATCAGGGATATTGGTAGCAAAATTACCAATCGGTACGGTGCACA ATAAGAAACCCATTTCACTCCAAACGAATGTGTACGTGTGATTATTAAAT TGTTTCATTGGAAAACGAATCATTTGTAAACCGCTTTTGAAAGGGAATTT CTCattgtgtttttattttctttagacCATGTCAAGTGAAACATTGGTCC AAACATAAAGAACTGTGTAACATATTGTCAGCTAAATAATACAGGTAGGA TTtagttgtttttcttcttcgacAAAATTTAAGCCAATTTGCCGCTCTAT TGATGTCTCCAACCCACGAAATCCATTTGTCGAAAATTCTGAAGATTCTC TCCATCTCTTAATTGatgtagatttttcacttttcattttcttgttttct AATGATCTTTGAAACCACAGTAGGTCTTGTATTTTGGTGACTTTTCCGTG TTTTCTCTTCTCTCCTCTCCTCTCCTTATGACTTTAATTCAAACAGTCTT CCTATCAAAACTTCAATTCTTCGCTCCCATGATTTGCATAAAGATTTATT GGTTTTAACTTTAAGACATGATTTTATCTCTATATGGTCGAGATTTTCTG GTAGCTAATATCAATATTAAGGTTGGTTTTGCTTTTTTGTTTGTCGTGCT GCAGCTCACTACAGTATTTGGTGAATCTGTCATTTTTACATTGTTATCAA actaaatgttgaaaaaagcaatgCATCAAACTCTTGAACCATTACTATTT ATATTTTAATAAGTCGTTTTCTACAAAACCTTTTTTGGAGCCGATATTTA GTCTAAAATCAAAACCTTTGATACGAATTCGCAAgtttttccaataaaat ttacTTGAGATAATTAATGAAATTTACCCATTTGAATTGATTTAAACCAC TAACGTTTTGCTATTATTTTTTATCAGTGATTCTTGGTTGAAAAAGGTGG GCAAAGAGTCGTTCTAATGTGATTTGATAAGTTATCTTCTAGAGCTGTCT ATCTTCATTCGCCGATGcggttttaattttcttaaatgacgttttacatt ttaaaatcaCATTTATCTTAATTCAGCTCTTAATTCATAGCTTTTATTAT TTATCGTGAGGATTATCTAAATTGTCACATCTTTATATGAACCTCGCTGG GCTTTTTCTCGACACAAAATCTTCAGAAATTTTCGTGGatgtttttggaa attttttaaatgcacttcaattcatcatggatattcttaactttttggag aaatcgtcctaaaatatttattctgcattcttaggttatagtctaaattc aaactagatttaaTATGTAATACATACGTCTAAACCATAAAATAACATTT TGGTGAAAGTGTTgagataattggcaatttacagttaaaaatgctctgaa atggcatttttagggtttatttactaaattccatgatggcgatattctta gcatattcttaagtttttggccaattttatcaagaatattcttataaaag aaaagcgTGTATACTGTTcgacgaagaaaaaatattaccTAGCGTGAAGG GAAATGGAATATTATAATATGGGAATGCGTGAAAAGGGGGTTGACGAGAA TTCTTTGCTTTACTCAGGAGAGAAGGTTTTATCTCTTTGttatgaagcaa aataattCAGCGGGCAGAATTGAAAAAGGAGATCCTAATTATCTGAATTA TTTCGCCGCCTGTTTACTTTATATGAATCACCATGGTAACACGAGAGAGA AAATCTTCTACTCCATTTTCTGTTGACTCTTCATGttaacatttcaaatt ttccagtcaaaaaCAAAGTTGCCATNTTATCAGATAAAATGAATTAGCCT CGGCAAAATCTTTATAATTTTAAAGTTCTTTCTATCAAATAAAATCATTA AGCCGAGCCATTGGGCTATTGTTATTGTAAAATGTCTTATTAGAATTTTA CCAAACGATCATTGCTTCAGTAGTTATTCCCCTCTCTGTACATGTAGGTA AAAAGTTGATTGTTTGGTCATTCTCTGAAACCATCTGAAAGAAGTGGCAA GCAAAGTACTTTCTTAATCATCCAATAATTGTTTCATTTCCATTTTGGTT GAAGTGTTTTTTCAAGTGCGTCATCTGTTCTGTGAATGGGATTATTTAAT TGATTAGAAACtgtattttcatattttctgcAGTTGGGGGTGTCAAAGGA AGTGTTTCTGTATGATTCTGCAATTTCCAGTACTGGCTCCTAAACAATTC GAATAGCTGCGAATAGTGAAATTGTTTGATACTTTTCATCTTTACCTTTG AGAGATAATAGAAGCATGTTCTTTCGATTCGCAGATATTCGGGTTGGCTT TTGGTTTGGTTATCTATTTTTATTATCAAAGGGCGAAAGGAAATCATAGT ATATCTGCTTTCCTGAATCCTTTTCACTTTGAACTCGCTGATAAACGGAG ATTTTTATGATCTCTTTAAAAAAGACCAAGTTAAACGAATCGACTGGTTA GCTCTTTGCTTTGATGAAATCCTCATACGAAATTGTTTCATCTTTCGAAT TTTCGTAAGGCGGAATTGTTTGGATATTGCTGGTTGTTGTTACAATTCAT ATTTAAGGTGTCATGCAGCTTTCATCCATCATCCACACTTTCCCTTTATT NtatttctttttcttttcatcatgTACCATATTTGGGAGGTATTAAATTG CTCTTTCCCACGTCAAAGATATTTTAGTCCTTTGTTGGAATTACACGCAT TtgagtaatttttgaaaatacgaAACGAAAACTATCTTGCGTAATTNATT TTTTCTTCaaaccaaaaagtaaaaatgttcGCTTTTGGGACTTACATCAG GCTTCCTCGGTTTCTTTTTTTTACGTTTACTCGCTAACTTGGTTATGCAT ATCACACAGATGGCTTAAGTATGTACACCAAGTAGGCTTTTGAATTGTGG TTTCATTCTTTGATATCGCTGACCGATAATCCAATATCCATTGATGTCGA ATGAAGATAAGTAGGAGAAACTTCCATCCAAATTCATCAtttttgattac ttttatttgtGGAAGGGGGTGCACAAAATTGCTAATGAATTGTCTAATGA CAgtgtattttgagaaaaaggAACTACTTTTTTCGATCAATTGTTTGTTC CattaaaatttccaacctttataaagattttttatttggaCAACTGTAAT CTataatttattttcctttttttacagCAAATTGAAAGAAAGAATGCATA ACTCTGGATGCTGACCAGCCTACAACATCGACTGCCAAGAAGAGAAGGAT GTCTTCAACAGCTTCCGCTTTAACAATCACACTTTTCGTTTTACACAGTA TTGCTATTACGCTTCATTGTCTTGGANgttttcttcattttgttgcaaga acttttgaagaatattttggtTTTGGCAAGTTCGTTGCAGCCTTCCATTT TGTAACATTTTATGTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000584XLOC_000584Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001009-exon-sc0000007-1491911889:663000..663242TCONS_00001009-exon-sc0000007-1491911889:663000..663242Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:663000..663242TCONS_00001009-exon-sc0000007-1510915933:663000..663242Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:663000..663242TCONS_00001009-exon-sc0000007-1575043694:663000..663242Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:669838..669880TCONS_00001009-exon-sc0000007-1491911889:669838..669880Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:669838..669880TCONS_00001009-exon-sc0000007-1510915933:669838..669880Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:669838..669880TCONS_00001009-exon-sc0000007-1575043694:669838..669880Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670217..670279TCONS_00001009-exon-sc0000007-1491911889:670217..670279Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670217..670279TCONS_00001009-exon-sc0000007-1510915933:670217..670279Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670217..670279TCONS_00001009-exon-sc0000007-1575043694:670217..670279Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670521..670637TCONS_00001009-exon-sc0000007-1491911889:670521..670637Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670521..670637TCONS_00001009-exon-sc0000007-1510915933:670521..670637Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670521..670637TCONS_00001009-exon-sc0000007-1575043694:670521..670637Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670782..670835TCONS_00001009-exon-sc0000007-1491911889:670782..670835Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670782..670835TCONS_00001009-exon-sc0000007-1510915933:670782..670835Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670782..670835TCONS_00001009-exon-sc0000007-1575043694:670782..670835Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670945..671024TCONS_00001009-exon-sc0000007-1491911889:670945..671024Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670945..671024TCONS_00001009-exon-sc0000007-1510915933:670945..671024Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670945..671024TCONS_00001009-exon-sc0000007-1575043694:670945..671024Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671122..671161TCONS_00001009-exon-sc0000007-1491911889:671122..671161Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671122..671161TCONS_00001009-exon-sc0000007-1510915933:671122..671161Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671122..671161TCONS_00001009-exon-sc0000007-1575043694:671122..671161Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671250..671338TCONS_00001009-exon-sc0000007-1491911889:671250..671338Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671250..671338TCONS_00001009-exon-sc0000007-1510915933:671250..671338Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671250..671338TCONS_00001009-exon-sc0000007-1575043694:671250..671338Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671451..671491TCONS_00001009-exon-sc0000007-1491911889:671451..671491Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671451..671491TCONS_00001009-exon-sc0000007-1510915933:671451..671491Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671451..671491TCONS_00001009-exon-sc0000007-1575043694:671451..671491Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671612..671674TCONS_00001009-exon-sc0000007-1491911889:671612..671674Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671612..671674TCONS_00001009-exon-sc0000007-1510915933:671612..671674Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671612..671674TCONS_00001009-exon-sc0000007-1575043694:671612..671674Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671961..672043TCONS_00001009-exon-sc0000007-1491911889:671961..672043Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671961..672043TCONS_00001009-exon-sc0000007-1510915933:671961..672043Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671961..672043TCONS_00001009-exon-sc0000007-1575043694:671961..672043Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:672300..672389TCONS_00001009-exon-sc0000007-1491911889:672300..672389Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:672300..672389TCONS_00001009-exon-sc0000007-1510915933:672300..672389Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:672300..672389TCONS_00001009-exon-sc0000007-1575043694:672300..672389Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:673066..673191TCONS_00001009-exon-sc0000007-1491911889:673066..673191Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:673066..673191TCONS_00001009-exon-sc0000007-1510915933:673066..673191Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:673066..673191TCONS_00001009-exon-sc0000007-1575043694:673066..673191Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:673730..673851TCONS_00001009-exon-sc0000007-1491911889:673730..673851Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:673730..673851TCONS_00001009-exon-sc0000007-1510915933:673730..673851Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:673730..673851TCONS_00001009-exon-sc0000007-1575043694:673730..673851Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:673979..674104TCONS_00001009-exon-sc0000007-1491911889:673979..674104Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:673979..674104TCONS_00001009-exon-sc0000007-1510915933:673979..674104Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:673979..674104TCONS_00001009-exon-sc0000007-1575043694:673979..674104Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:674675..674743TCONS_00001009-exon-sc0000007-1491911889:674675..674743Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:674675..674743TCONS_00001009-exon-sc0000007-1510915933:674675..674743Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:674675..674743TCONS_00001009-exon-sc0000007-1575043694:674675..674743Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:677727..677968TCONS_00001009-exon-sc0000007-1491911889:677727..677968Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:677727..677968TCONS_00001009-exon-sc0000007-1510915933:677727..677968Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:677727..677968TCONS_00001009-exon-sc0000007-1575043694:677727..677968Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:663000..677968 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.74683 4.58291 1.70558 3.41586 7.66006 7.00518 2.67098 1.42908 4.71324 6.51689 2.15387 5.23507 1.42545 2.04326 2.50349 3.85872 1.61422 3.60843 1.41622 1.93144 2.6478 1.36707 1.31186 0.878031 1.86015 1.50248 1.00959 0.240727 2.69306 4.26889
Blast
BLAST of TCONS_00001009 vs. Swiss-Prot (Human)
Match: ZMY10 (Zinc finger MYND domain-containing protein 10 OS=Homo sapiens GN=ZMYND10 PE=1 SV=2)

HSP 1 Score: 367.081 bits (941), Expect = 1.140e-120
Identity = 195/432 (45.14%), Postives = 292/432 (67.59%), Query Frame = 2
Query:  167 VLLSTEAELLVKALDVSSLEKVGDKRWWNRHDMLEKLNIQSIMNIP-SNSCFITENLLTHGKISLVINELITSEIWSERIFPILYHEMSQKDQSTLPVYMTLFHEATVAGLVESVFYYKEVSEEAGDFLLDLIDYAYRKLTKLISKQHCESITQ------KDPKNDLLKQNEDIQFTIAMKCISIIKYICDAMDSITLSAITRILNTHDFPYLLSQLIDLAPWKKRKENGEVEIFTDNKWVIVPKDETHLLPKIEGQVWLTLYQLLLHPEAQRKYEYNSHRKTQXXXXXXXXXXXXXXXXPYLSEVQRFLENLSVMDPPPSKQDLIIEQIPEVRNKLERMYEGRWNKIAKTQLQQNFTMSSKDMKEHAQRLAATYDLDILESLIDEAPTCSNCQNEATKRCSRCQNEWYCSRPCQVKHWSKHKELCNILSAK 1441
            +LL  EAE+LV+ L    L ++G + W  +H+ LEKLN+Q+I++   S    I E L+THGK+  ++ ELI  E+W +++FP+       K Q+T P+YM + HEA++  L+E+VF++KEV E A D +LDL+DY +RKLT L+++  C    +       +P  +L KQ E ++F IA+K +S+++YI D +DS++LS ++R+L+TH+ P LL +L++ +PW +R E G+++ F  ++W  V   E   L K++GQVW+ LY LLL PEAQ +Y   S  K +LLKLR +L + LLDQLP L+ +Q FL +L++ +  P K+DL++EQIPE+  +LER   G+W  IAK QLQ  F+ S +D++  A+R A TY LD+LE++  E P C+ C  EA+KRCSRCQNEWYC R CQVKHW KH + C +L+A+
Sbjct:    6 LLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQELLVTHGKVPTLVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETVFFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELMEFEIALKALSVLRYITDCVDSLSLSTLSRMLSTHNLPCLLVELLEHSPWSRR-EGGKLQQFEGSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFAKGRLLKLRAFLTDTLLDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHVFSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC-VLAAQ 435          
The following BLAST results are available for this feature:
BLAST of TCONS_00001009 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZMY101.140e-12045.14Zinc finger MYND domain-containing protein 10 OS=H... [more]
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