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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000986 ID=TCONS_00000986|Name=TCONS_00000986|organism=Clytia hemisphaerica|type=transcript|length=749bp
aTTTTTTACTCCGCAAACCATCAAACATcgatttcaaacatgaaacgtcA
CGATGTATGAGGAACAATGTTTGttggtttgctcccagcttaaGCCATTG
TCGCGTTTTGCTTTCCAAATTGAAGGATTACTCAAGTGACGCAATGCAAT
ggtatcattcaaactgacgtCAATTAAAAATATCGTTAGAAGCTTGAAGT
TTTGAAGTGGTTGGTGTGTTTCCACCTTTTCTGAAAAAGGTTTTCAtggg
aaagttttttcaaaaaagattggaAGGAAGATGGGAAACTACGAAAGACA
GGAAAAATTGTTGGAGAGAAAACATGAAGAGTTGAAACAACAGGTTCATG
AAATGCGACAAGAGAGCGCAGCCATCCTCAACAATATCTCACTCACTGAA
CACAAAATCAAGTTGGAGAAGAATTATCTCAATCTCAAAAgatcaaccaa
tcaaatcgtCGGTGAAAGGTTTCTGGATTATAAGAAAAGTTTCACTGCAC
GCTTGGAGCACATTAAAGCCAAGATCAATCTTTACGTCATGGACTTGACA
CAAGAAGAAAACTTCCTAAAGAACAGATTGGACTGGCGGCTCGACAAAAA
GAAAGTTCAAGAGATAGTACAATTGGAAGACCTACGCAAGAAATTACAAA
ATGTTTCTCTCAATTTGAAGGAAGAAATCAGATATATGCAGTCTTTCAGA
TTGGACAATCAAGACATCGAGTTATGATCGTTTTGTTTATTTAAAACTG Run BLAST on NCBI protein sequence of TCONS_00000986-protein >TCONS_00000986-protein ID=TCONS_00000986-protein|Name=TCONS_00000986-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
MGNYERQEKLLERKHEELKQQVHEMRQESAAILNNISLTEHKIKLEKNYL
NLKRSTNQIVGERFLDYKKSFTARLEHIKAKINLYVMDLTQEENFLKNRL
DWRLDKKKVQEIVQLEDLRKKLQNVSLNLKEEIRYMQSFRLDNQDIEL Run BLAST on NCBI transcript from alignment at sc0000007:293261..295111+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000986 ID=TCONS_00000986|Name=TCONS_00000986|organism=Clytia hemisphaerica|type=transcript|length=1851bp|location=Sequence derived from alignment at sc0000007:293261..295111+ (Clytia hemisphaerica)
aTTTTTTACTCCGCAAACCATCAAACATcgatttcaaacatgaaacgtcA
CGATGTATGAGGAACAATGTTTGttggtttgctcccagcttaaGCCATTG
TCGCGTTTTGCTTTCCAAATTGAAGGATTACTCAAGTGACGCAATGCAAT
ggtatcattcaaactgacgtCAATTAAAAATATCGTTAGAAGCTTGAAGT
TTTGAAGTGGTTGGTGTGTTTCCACCTTTTCTGAAAAAGGTTTTCAtggg
aaagttttttcaaaaaagattggaAGGAAGATGGGAAACTACGAAAGACA
GGAAAAATTGTTGGAGAGAAAACATGAAGAGTTGAAACAACAGGTTCATG
AAATGCGACAAGAGAGCGCAGCCATCCTCAACAATATCTCACTCACTGAA
CACAAAATCAAGTTGGAGAAGAATTATCTCAATCTCAAAAgatcaaccaa
tcaaatcgtCGGTGAAAGGTTTCTGGATTATAAGGTAAGAAAGTGATTTC
ACCCAATGGATGgatatgaaaaatcaaattcaagtAGAAATGGAATTCAT
TTAGTGAAATTCTCGTCCTTGTAAAAATGAGGAAAAGTTTAACCAAACTG
AGGATGTCGGCGCATCAAAGAGCGACTTCCCTCTCCAATTAGATACCAAT
TCATTGAAAAGTCCTGTTGAGATTGGCGAGTTTTTGTATTCACCCTTTTG
GGGAAGGCGTAGAGACTGGAACAACTTGGAACAATCCGCAGTTTTTGACC
CATAAAATTGAGGGGGTATCTTAGCGCTCATATACAATCGTACAGGGAGT
TATACAAATCAAAAAACTATAACCAACTCCGCCACAATAAAAGCACAGAT
ATATGAACTGATTATTGATTAACTCATTATTGATAACGGCTGAACGGTGA
AATTGACGTGTCTATTTCTTTCATTAGTTTTCACGATCCAgctaaaaaaa
actaaattttctggatttattttcgcgaatcagaCTTAAAATATTTCGCG
TGGGTTTAATTTTGCAAATCAATTGAAATGTCCCTGAAAACACCGATTTT
CTCACAAATAGCACATTTACACGGTATTTCAAGCCGAAAATCTGATCTAT
TACGTGGATTTATTTCGCGCCGAGATAGCAATCTTTTGCGATTTTGCGAG
TTTTATTTTCACGAAAAAGGCAAAGATTCGCGAAAATACGAGATTACATC
TCACAAGAAAGAATTAATCCGATTGGGGTATAGCGTTTTGCTTTAGTTCG
AGAACTCAAGTTGAATTGTTAGCACTAACTTTTCTCAAAGGAAAAGCCGA
AAAAGtaattgaaatatttgagtAATGAAAAAATTCGGTCTGTTATACAA
GACTTTTAGAATCCGTCGCATATTTCTTGAGTAGATCGggttttgaaact
tttgtcgAGAGGGGGGGGGCAAGAAATGGTTGATACGATAGAGCATaaaa
ttctgcattttcattCTGCAGAGCATAAAAGTATACTACAACAAGTCAGG
TACATTAATCATTAAGGATCGTCATCtatctgaaaaaaatagcttttcTT
TGTGTGGtcactaaaatattttgatttctgTTCTAGAAAAGTTTCACTGC
ACGCTTGGAGCACATTAAAGCCAAGATCAATCTTTACGTCATGGACTTGA
CACAAGAAGAAAACTTCCTAAAGAACAGATTGGACTGGCGGCTCGACAAA
AAGAAAGTTCAAGAGATAGTACAATTGGAAGACCTACGCAAGAAATTACA
AAATGTTTCTCTCAATTTGAAGGAAGAAATCAGATATATGCAGTCTTTCA
GATTGGACAATCAAGACATCGAGTTATGATCGTTTTGTTTATTTAAAACT
G Coding sequence (CDS) from alignment at sc0000007:293261..295111+ >TCONS_00000986 ID=TCONS_00000986|Name=TCONS_00000986|organism=Clytia hemisphaerica|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000007:293261..295111+ (Clytia hemisphaerica)
ATGGGAAACTACGAAAGACAGGAAAAATTGTTGGAGAGAAAACATGAAGA
GTTGAAACAACAGGTTCATGAAATGCGACAAGAGAGCGCAGCCATCCTCA
ACAATATCTCACTCACTGAACACAAAATCAAGTTGGAGAAGAATTATCTC
AATCTCAAAAgatcaaccaatcaaatcgtCGGTGAAAGGTTTCTGGATTA
TAAGAAAAGTTTCACTGCACGCTTGGAGCACATTAAAGCCAAGATCAATC
TTTACGTCATGGACTTGACACAAGAAGAAAACTTCCTAAAGAACAGATTG
GACTGGCGGCTCGACAAAAAGAAAGTTCAAGAGATAGTACAATTGGAAGA
CCTACGCAAGAAATTACAAAATGTTTCTCTCAATTTGAAGGAAGAAATCA
GATATATGCAGTCTTTCAGATTGGACAATCAAGACATCGAGTTATGAATG
GGAAACTACGAAAGACAGGAAAAATTGTTGGAGAGAAAACATGAAGAGTT
GAAACAACAGGTTCATGAAATGCGACAAGAGAGCGCAGCCATCCTCAACA
ATATCTCACTCACTGAACACAAAATCAAGTTGGAGAAGAATTATCTCAAT
CTCAAAAgatcaaccaatcaaatcgtCGGTGAAAGGTTTCTGGATTATAA
GAAAAGTTTCACTGCACGCTTGGAGCACATTAAAGCCAAGATCAATCTTT
ACGTCATGGACTTGACACAAGAAGAAAACTTCCTAAAGAACAGATTGGAC
TGGCGGCTCGACAAAAAGAAAGTTCAAGAGATAGTACAATTGGAAGACCT
ACGCAAGAAATTACAAAATGTTTCTCTCAATTTGAAGGAAGAAATCAGAT
ATATGCAGTCTTTCAGATTGGACAATCAAGACATCGAGTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000986-exon-sc0000007-1491911889:293261..293744 | TCONS_00000986-exon-sc0000007-1491911889:293261..293744 | Clytia hemisphaerica | exon |
| TCONS_00000986-exon-sc0000007-1510915933:293261..293744 | TCONS_00000986-exon-sc0000007-1510915933:293261..293744 | Clytia hemisphaerica | exon |
| TCONS_00000986-exon-sc0000007-1575043694:293261..293744 | TCONS_00000986-exon-sc0000007-1575043694:293261..293744 | Clytia hemisphaerica | exon |
| TCONS_00000986-exon-sc0000007-1491911889:294847..295111 | TCONS_00000986-exon-sc0000007-1491911889:294847..295111 | Clytia hemisphaerica | exon |
| TCONS_00000986-exon-sc0000007-1510915933:294847..295111 | TCONS_00000986-exon-sc0000007-1510915933:294847..295111 | Clytia hemisphaerica | exon |
| TCONS_00000986-exon-sc0000007-1575043694:294847..295111 | TCONS_00000986-exon-sc0000007-1575043694:294847..295111 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:293261..295111 + |
Blast
The following BLAST results are available for this feature:
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